BLASTX nr result
ID: Zingiber25_contig00014629
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00014629
(552 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapan... 99 9e-19
ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapan... 99 9e-19
ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassai... 99 9e-19
ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassai... 99 9e-19
ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopan... 94 3e-17
ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopan... 94 3e-17
gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlise... 91 3e-17
gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinque... 91 2e-16
ref|YP_008474414.1| ribosomal protein S12 (chloroplast) [Aegilop... 91 2e-16
gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sin... 89 5e-16
ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberi... 87 3e-15
gb|AEQ36962.1| ribosomal protein S12 (chloroplast) [Datura stram... 87 3e-15
ref|XP_004516896.1| PREDICTED: 30S ribosomal protein S12, chloro... 86 6e-15
ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygro... 86 6e-15
ref|YP_001381684.1| ribosomal protein S12 [Medicago truncatula] 86 8e-15
gb|AGZ19238.1| ribosomal protein S12 (chloroplast) [Oryza rufipo... 85 1e-14
ref|YP_008816226.1| ribosomal protein S12 (chloroplast) [Glycine... 84 2e-14
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ... 84 2e-14
ref|YP_007475683.1| ribosomal protein S12 [Zingiber spectabile] ... 83 4e-14
gb|AEZ49115.1| ribosomal protein S12 [Renealmia alpinia] 82 9e-14
>ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599431|gb|AGG39190.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 161
Score = 98.6 bits (244), Expect = 9e-19
Identities = 51/60 (85%), Positives = 53/60 (88%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK*ENFSSITD 368
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLVQIMS +K K + FSSI D
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRK-KTFSSIND 59
>ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599418|gb|AGG39177.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 165
Score = 98.6 bits (244), Expect = 9e-19
Identities = 51/60 (85%), Positives = 53/60 (88%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK*ENFSSITD 368
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLVQIMS +K K + FSSI D
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRK-KTFSSIND 59
>ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603148|ref|YP_008815141.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940339|ref|YP_008814880.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599150|gb|AGG39016.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599252|gb|AGG39103.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599584|gb|AGG39277.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 149
Score = 98.6 bits (244), Expect = 9e-19
Identities = 51/60 (85%), Positives = 53/60 (88%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK*ENFSSITD 368
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLVQIMS +K K + FSSI D
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRK-KTFSSIND 59
>ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603135|ref|YP_008815096.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940326|ref|YP_008814835.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599137|gb|AGG39003.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599239|gb|AGG39090.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599571|gb|AGG39264.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 150
Score = 98.6 bits (244), Expect = 9e-19
Identities = 51/60 (85%), Positives = 53/60 (88%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK*ENFSSITD 368
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLVQIMS +K K + FSSI D
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRK-KTFSSIND 59
>ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599672|gb|AGG39364.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 142
Score = 93.6 bits (231), Expect = 3e-17
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK 395
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLVQIMS +K K
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRK 51
>ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599659|gb|AGG39351.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 143
Score = 93.6 bits (231), Expect = 3e-17
Identities = 46/51 (90%), Positives = 47/51 (92%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK 395
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLVQIMS +K K
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRK 51
>gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlisea aurea]
Length = 106
Score = 90.9 bits (224), Expect(2) = 3e-17
Identities = 41/50 (82%), Positives = 42/50 (84%)
Frame = +2
Query: 401 FVRTHDLNESHIHPSTCSSTLRTFSKSGRFRNISYWLSCISNKLFNSWHV 550
FV HDLNESHIHPSTCSSTLRT K G FR+IS WLSCISNKLFN WHV
Sbjct: 53 FVSAHDLNESHIHPSTCSSTLRTSPKGGGFRDISNWLSCISNKLFNGWHV 102
Score = 23.1 bits (48), Expect(2) = 3e-17
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 273 IGFTPMETINSIYNTQYRYMKNLFHLLYSLVPSVIL 380
IGF PM+TI I+ + Y + +F L+ + V S L
Sbjct: 1 IGFAPMKTIRFIHISSYLVL--VFFLIVNGVRSSCL 34
>gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinquefolius]
Length = 65
Score = 90.9 bits (224), Expect = 2e-16
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK*ENFSSITD 368
MPTIKQLIRN RQPIRNV KSPALR CPQRRGTCTR YV LVQIMS +K K + FSSI D
Sbjct: 1 MPTIKQLIRNTRQPIRNVPKSPALRGCPQRRGTCTRGYVGLVQIMSWDKRK-KTFSSIND 59
>ref|YP_008474414.1| ribosomal protein S12 (chloroplast) [Aegilops speltoides]
gi|568245019|ref|YP_008963927.1| ribosomal protein S12
(chloroplast) [Aegilops geniculata]
gi|568247017|ref|YP_008963850.1| ribosomal protein S12
(chloroplast) [Aegilops cylindrica]
gi|394986515|gb|AFN42396.1| ribosomal protein S12
(chloroplast) [Aegilops speltoides]
gi|554515577|gb|AGY92880.1| ribosomal protein S12
(chloroplast) [Aegilops cylindrica]
gi|554515655|gb|AGY92957.1| ribosomal protein S12
(chloroplast) [Aegilops geniculata]
Length = 53
Score = 90.5 bits (223), Expect = 2e-16
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK 395
MPT+KQLIRNARQPIRN K+ AL+ CPQRRGTC RVYVRLVQIM+SNKYK
Sbjct: 1 MPTVKQLIRNARQPIRNARKTAALKGCPQRRGTCARVYVRLVQIMTSNKYK 51
>gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sinensis]
Length = 60
Score = 89.4 bits (220), Expect = 5e-16
Identities = 44/51 (86%), Positives = 45/51 (88%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK 395
MPTIKQLIRN RQPIRNVTKSPAL CPQRRGTCTRVYVRLVQIM +K K
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYVRLVQIMGWDKTK 51
>ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberis bealei]
gi|536462705|gb|AGU37070.1| ribosomal protein S12
(chloroplast) [Berberis bealei]
Length = 46
Score = 87.0 bits (214), Expect = 3e-15
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIM 413
MPTIKQLIRN RQPI+NVTKSPALR CPQRRGTCTRVYVRLVQI+
Sbjct: 1 MPTIKQLIRNTRQPIKNVTKSPALRGCPQRRGTCTRVYVRLVQII 45
>gb|AEQ36962.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
Length = 122
Score = 87.0 bits (214), Expect = 3e-15
Identities = 42/48 (87%), Positives = 42/48 (87%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSN 404
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLV I N
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVTITPKN 48
>ref|XP_004516896.1| PREDICTED: 30S ribosomal protein S12, chloroplastic-like [Cicer
arietinum] gi|502181875|ref|XP_004516900.1| PREDICTED:
30S ribosomal protein S12, chloroplastic-like [Cicer
arietinum]
Length = 42
Score = 85.9 bits (211), Expect = 6e-15
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLV 422
MPTIKQLIRNARQPIRNVTKSPALR CPQRRGTCTRVYVRLV
Sbjct: 1 MPTIKQLIRNARQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygrometrica]
gi|340549431|gb|AEK53253.1| ribosomal protein S12
(chloroplast) [Boea hygrometrica]
Length = 134
Score = 85.9 bits (211), Expect = 6e-15
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK*ENFSSIT 371
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLV S NFS+IT
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVS--GSKGDLSVNFSTIT 57
>ref|YP_001381684.1| ribosomal protein S12 [Medicago truncatula]
Length = 127
Score = 85.5 bits (210), Expect = 8e-15
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQI 416
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLV I
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVTI 44
>gb|AGZ19238.1| ribosomal protein S12 (chloroplast) [Oryza rufipogon]
Length = 49
Score = 85.1 bits (209), Expect = 1e-14
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNK 401
MPT+KQLIRNARQPIRN KS AL+ CPQRRGTC RVYVRLV+IM SNK
Sbjct: 1 MPTVKQLIRNARQPIRNARKSAALKGCPQRRGTCARVYVRLVRIMGSNK 49
>ref|YP_008816226.1| ribosomal protein S12 (chloroplast) [Glycine soja]
gi|558604199|ref|YP_008816270.1| ribosomal protein S12
(chloroplast) [Glycine soja] gi|557469752|gb|AHA04005.1|
ribosomal protein S12 (chloroplast) [Glycine soja]
gi|557469791|gb|AHA04044.1| ribosomal protein S12
(chloroplast) [Glycine soja]
Length = 127
Score = 84.3 bits (207), Expect = 2e-14
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQI 416
MPT+KQLIRN RQPIRNVTKSPALR CPQRRGTCTRVYVRLV I
Sbjct: 1 MPTMKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVTI 44
>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
gi|350996572|gb|AEQ37083.1| ribosomal protein S12
[Datura stramonium]
Length = 137
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/60 (71%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYVRLVQIMSSNKYK*E-NFSSIT 371
MPTIKQLIRN RQPIRNVTKSPALR CPQRRGTCTRVY+ + S +K NFS+IT
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYISCTVLKSGSKGDLSVNFSTIT 60
>ref|YP_007475683.1| ribosomal protein S12 [Zingiber spectabile]
gi|456061615|ref|YP_007475728.1| ribosomal protein S12
[Zingiber spectabile] gi|567853715|ref|YP_008854573.1|
ribosomal protein S12 [Curcuma roscoeana]
gi|567853750|ref|YP_008854618.1| ribosomal protein S12
[Curcuma roscoeana] gi|449326230|gb|AGE92815.1|
ribosomal protein S12 [Zingiber spectabile]
gi|449326243|gb|AGE92828.1| ribosomal protein S12
[Zingiber spectabile] gi|449326838|gb|AGE93416.1|
ribosomal protein S12 [Alpinia zerumbet]
gi|449326851|gb|AGE93429.1| ribosomal protein S12
[Alpinia zerumbet] gi|557637525|gb|AHA13120.1| ribosomal
protein S12 [Curcuma roscoeana]
gi|557637560|gb|AHA13155.1| ribosomal protein S12
[Curcuma roscoeana]
Length = 122
Score = 83.2 bits (204), Expect = 4e-14
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYV 431
MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVY+
Sbjct: 1 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVYI 39
>gb|AEZ49115.1| ribosomal protein S12 [Renealmia alpinia]
Length = 118
Score = 82.0 bits (201), Expect = 9e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = -3
Query: 547 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVY 434
MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVY
Sbjct: 1 MPTIKQLIRNARQPIRNVTKSPALRECPQRRGTCTRVY 38