BLASTX nr result
ID: Zingiber25_contig00014544
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00014544
(529 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004977400.1| PREDICTED: cytochrome P450 714C3-like isofor... 66 4e-09
ref|NP_001148976.1| protein binding protein [Zea mays] gi|195623... 65 7e-09
ref|XP_004978505.1| PREDICTED: uncharacterized protein LOC101780... 63 4e-08
ref|XP_004978503.1| PREDICTED: uncharacterized protein LOC101780... 63 4e-08
ref|XP_002531814.1| zinc finger protein, putative [Ricinus commu... 61 2e-07
gb|EXC35220.1| E3 ubiquitin-protein ligase RING1-like protein [M... 57 2e-06
ref|XP_002323103.2| hypothetical protein POPTR_0016s14830g [Popu... 56 4e-06
ref|XP_003623661.1| E3 ubiquitin-protein ligase CG7694 [Medicago... 56 4e-06
ref|XP_002265092.1| PREDICTED: uncharacterized protein LOC100255... 56 4e-06
emb|CAN75069.1| hypothetical protein VITISV_040928 [Vitis vinifera] 56 4e-06
ref|NP_195818.1| RING/U-box domain-containing protein [Arabidops... 56 6e-06
dbj|BAD44181.1| unknown protein [Arabidopsis thaliana] 56 6e-06
ref|XP_006398553.1| hypothetical protein EUTSA_v10015834mg, part... 55 1e-05
>ref|XP_004977400.1| PREDICTED: cytochrome P450 714C3-like isoform X3 [Setaria italica]
Length = 511
Score = 66.2 bits (160), Expect = 4e-09
Identities = 41/99 (41%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +1
Query: 88 ELETEEAPDFNG-TSTEPGRVEHP-QELNQPRGEGNRIRWLFLAAAPIVSIVGIALAFWL 261
ELE E + G T E EH +P G R RWLF+AAAP+VS+V +AL
Sbjct: 419 ELEIEGISNTAGDTIEETNAHEHAVYSAQEPNGANGRHRWLFIAAAPVVSLVSLALVLCF 478
Query: 262 KKPTGEVRIQHNTREQLPQRSQSTVTSPATRNRRWWYFF 378
P G N R QL RSQST T+ R WW F
Sbjct: 479 TNPAG------NVRRQLYHRSQSTTTTRVDTRRSWWSMF 511
>ref|NP_001148976.1| protein binding protein [Zea mays] gi|195623742|gb|ACG33701.1|
protein binding protein [Zea mays]
gi|413924712|gb|AFW64644.1| putative RING zinc finger
domain superfamily protein [Zea mays]
Length = 502
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/97 (36%), Positives = 45/97 (46%)
Frame = +1
Query: 88 ELETEEAPDFNGTSTEPGRVEHPQELNQPRGEGNRIRWLFLAAAPIVSIVGIALAFWLKK 267
E E + + G + QP G R RWLF+AAAP+VS+V +AL
Sbjct: 412 EPEVDGGSNTGGDTMNETNTHEQHTAQQPNGAHGRHRWLFIAAAPVVSLVSLALVLCFTN 471
Query: 268 PTGEVRIQHNTREQLPQRSQSTVTSPATRNRRWWYFF 378
P G N R QL +RSQ+T T+ R WW F
Sbjct: 472 PAG------NVRRQLCRRSQTTTTAHVDTRRSWWSMF 502
>ref|XP_004978505.1| PREDICTED: uncharacterized protein LOC101780364 isoform X3 [Setaria
italica]
Length = 510
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 121 GTSTEPGRVEHP-QELNQPRGEGNRIRWLFLAAAPIVSIVGIALAFWLKKPTGEVRIQHN 297
GT E EH +P G R RWLF+AAAP+VS+V +AL P G N
Sbjct: 430 GTMEETNAHEHAVYSAQEPNGAHGRHRWLFIAAAPVVSLVSLALVLCFTNPAG------N 483
Query: 298 TREQLPQRSQSTVTSPATRNRRWWYFF 378
R QL RSQ T T+ R WW F
Sbjct: 484 VRRQLCHRSQITTTTRVDVRRSWWSMF 510
>ref|XP_004978503.1| PREDICTED: uncharacterized protein LOC101780364 isoform X1 [Setaria
italica] gi|514807296|ref|XP_004978504.1| PREDICTED:
uncharacterized protein LOC101780364 isoform X2 [Setaria
italica]
Length = 511
Score = 63.2 bits (152), Expect = 4e-08
Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +1
Query: 121 GTSTEPGRVEHP-QELNQPRGEGNRIRWLFLAAAPIVSIVGIALAFWLKKPTGEVRIQHN 297
GT E EH +P G R RWLF+AAAP+VS+V +AL P G N
Sbjct: 431 GTMEETNAHEHAVYSAQEPNGAHGRHRWLFIAAAPVVSLVSLALVLCFTNPAG------N 484
Query: 298 TREQLPQRSQSTVTSPATRNRRWWYFF 378
R QL RSQ T T+ R WW F
Sbjct: 485 VRRQLCHRSQITTTTRVDVRRSWWSMF 511
>ref|XP_002531814.1| zinc finger protein, putative [Ricinus communis]
gi|223528548|gb|EEF30571.1| zinc finger protein,
putative [Ricinus communis]
Length = 573
Score = 60.8 bits (146), Expect = 2e-07
Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Frame = +1
Query: 1 EETKR-NYNITARHEPQPPNTDAEIYYAFTE-LETEEAPDFNGTSTEPGRV-EHPQELNQ 171
EE KR N N HE Q + + ++ E EA +F+ + V + +N
Sbjct: 440 EEGKRSNSNRMGIHEIQQQDVSEDSSSDDSDGAEAHEAHEFDQGGIDQREVLDVDPAVNT 499
Query: 172 PRGEGNRIRWLFLAAAPIVSIVGIALAFWLKKPTGEVRIQHNTREQLPQRSQSTVTSPAT 351
EG+ RW FLAAAPIV +VGI L +WL P H +PQR + +P +
Sbjct: 500 SGREGSGRRWFFLAAAPIVGLVGIVLVYWLGSPQRRGPTHHC---DVPQRGLHQIRAPGS 556
Query: 352 --------RNRRWWYFF 378
R+RRWW FF
Sbjct: 557 SAPSQRGNRSRRWWSFF 573
>gb|EXC35220.1| E3 ubiquitin-protein ligase RING1-like protein [Morus notabilis]
Length = 549
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Frame = +1
Query: 55 NTDAEIYYAFTELETEEAPDFN-GTSTEPGRVEHPQELNQPRGEGNRIRWLFLAAAPIVS 231
N + F++ E EE +F+ G + + +N E R RW FLAAAPIVS
Sbjct: 437 NVTEDSSVTFSDREDEEEREFSEGRLDQRELLGEEPAVNSSGRESGRGRWFFLAAAPIVS 496
Query: 232 IVGIALAFWL----KKPTGEVRIQHNTREQLPQRSQSTVTSPATRNRRWWYFF 378
+VGI L W+ + P+ + R++ S S+ R RRWW F
Sbjct: 497 LVGIVLVLWMGNVGRGPSRRTILPEQNRQRHIHISGSSSNWSENRGRRWWSLF 549
>ref|XP_002323103.2| hypothetical protein POPTR_0016s14830g [Populus trichocarpa]
gi|550321534|gb|EEF04864.2| hypothetical protein
POPTR_0016s14830g [Populus trichocarpa]
Length = 543
Score = 56.2 bits (134), Expect = 4e-06
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 18/114 (15%)
Frame = +1
Query: 88 ELETEEAPDFNGTSTEPGRVEHPQ----------ELNQPRGEGNRIRWLFLAAAPIVSIV 237
+++ +EA + + + +EH Q L+ EG R RW LAAAP+VS++
Sbjct: 432 DVQQQEASEDSSSDVSDEPLEHGQIGRELLDVGLPLSTSGREGTRRRWFLLAAAPLVSLL 491
Query: 238 GIALAFWLKKPTGEVRIQHNTREQLPQRS--QSTVTSPATRN------RRWWYF 375
GI L W P G + N+ P+R Q V+ P N RRWW+F
Sbjct: 492 GIVLVMWWDNPQGR---RANSHGNFPERGLYQIQVSGPPQPNQKVNERRRWWFF 542
>ref|XP_003623661.1| E3 ubiquitin-protein ligase CG7694 [Medicago truncatula]
gi|355498676|gb|AES79879.1| E3 ubiquitin-protein ligase
CG7694 [Medicago truncatula]
Length = 520
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = +1
Query: 100 EEAPDFNGTSTEPGRVEHPQELNQPRGEGNRIRWLFLAAAPIVSIVGIALAFWLKKPTGE 279
EEA + +GT+T +N G RWLFLAAAPIVS+VG+ + WL +
Sbjct: 429 EEAVEDDGTTTH-------DTVNSSAASGGSGRWLFLAAAPIVSLVGMVIVLWLGSNSQI 481
Query: 280 VRIQHNTREQLPQRSQSTV------TSPATRNRRWW 369
+H++ L ++Q V +R+RRWW
Sbjct: 482 EETRHSSTRYLSVQNQHPVHVSGSQNQRESRSRRWW 517
>ref|XP_002265092.1| PREDICTED: uncharacterized protein LOC100255416 [Vitis vinifera]
Length = 587
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/73 (43%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +1
Query: 181 EGNRIRWLFLAAAPIVSIVGIALAFWLKKPT-------GEVRIQHNTREQLPQRSQSTVT 339
EG R RW FLAAAPI +VG+AL WL+ P G IQ T QL S
Sbjct: 517 EGGRGRWFFLAAAPIAGLVGMALVLWLRIPVTDRRGAIGRSNIQGQT--QLHSSGSSLPN 574
Query: 340 SPATRNRRWWYFF 378
R+RRWW F
Sbjct: 575 QRENRSRRWWSLF 587
>emb|CAN75069.1| hypothetical protein VITISV_040928 [Vitis vinifera]
Length = 648
Score = 56.2 bits (134), Expect = 4e-06
Identities = 32/73 (43%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +1
Query: 181 EGNRIRWLFLAAAPIVSIVGIALAFWLKKPT-------GEVRIQHNTREQLPQRSQSTVT 339
EG R RW FLAAAPI +VG+AL WL+ P G IQ T QL S
Sbjct: 578 EGGRGRWFFLAAAPIAGLVGMALVLWLRIPVTDRRGAIGRSNIQGQT--QLHSSGSSLPN 635
Query: 340 SPATRNRRWWYFF 378
R+RRWW F
Sbjct: 636 QRENRSRRWWSLF 648
>ref|NP_195818.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|7340672|emb|CAB82971.1| putative protein [Arabidopsis
thaliana] gi|63003746|gb|AAY25402.1| At5g01980
[Arabidopsis thaliana] gi|115311511|gb|ABI93936.1|
At5g01980 [Arabidopsis thaliana]
gi|332003033|gb|AED90416.1| RING/U-box domain-containing
protein [Arabidopsis thaliana]
Length = 493
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +1
Query: 91 LETEEAPDFNGTSTEPGRVEHPQELNQPRGEG--NRIRWLFLAAAPIVSIVGIALAFWLK 264
L+ E + TE G E+ + G +R RWLFLAAAP+VS+VG+ LA WL
Sbjct: 409 LDVSEDSSSSDDGTESGEEEYVERGESESGVSRVSRGRWLFLAAAPVVSLVGVVLAMWLS 468
Query: 265 KPTGE-VRIQHNTREQLPQRSQSTVTSPATRNRRWWYFF 378
P + I H+ RE R RRW FF
Sbjct: 469 SPHRRGIAISHSQRE--------------NRTRRWLPFF 493
>dbj|BAD44181.1| unknown protein [Arabidopsis thaliana]
Length = 443
Score = 55.8 bits (133), Expect = 6e-06
Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +1
Query: 91 LETEEAPDFNGTSTEPGRVEHPQELNQPRGEG--NRIRWLFLAAAPIVSIVGIALAFWLK 264
L+ E + TE G E+ + G +R RWLFLAAAP+VS+VG+ LA WL
Sbjct: 359 LDVSEDSSSSDDGTESGEEEYVERGESESGVSRVSRGRWLFLAAAPVVSLVGVVLAMWLS 418
Query: 265 KPTGE-VRIQHNTREQLPQRSQSTVTSPATRNRRWWYFF 378
P + I H+ RE R RRW FF
Sbjct: 419 SPHRRGIAISHSQRE--------------NRTRRWLPFF 443
>ref|XP_006398553.1| hypothetical protein EUTSA_v10015834mg, partial [Eutrema
salsugineum] gi|557099643|gb|ESQ40006.1| hypothetical
protein EUTSA_v10015834mg, partial [Eutrema salsugineum]
Length = 503
Score = 55.1 bits (131), Expect = 1e-05
Identities = 37/91 (40%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +1
Query: 130 TEPGRVEHPQELNQPRGEG-------NRIRWLFLAAAPIVSIVGIALAFWLKKP-TGEVR 285
TE G EH + RGE +R RWLFLAAAP+VS+VG+ LA WL P ++
Sbjct: 432 TEAGEEEHLE-----RGESGASVSRVSRGRWLFLAAAPVVSLVGVVLAMWLSNPQRRDIV 486
Query: 286 IQHNTREQLPQRSQSTVTSPATRNRRWWYFF 378
I HN R R RRW FF
Sbjct: 487 ISHNQR--------------GNRTRRWLPFF 503