BLASTX nr result

ID: Zingiber25_contig00014200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00014200
         (335 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGB52036.1| putative zinc finger transcription factor, partia...    75   7e-12
ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containin...    60   3e-07
emb|CBI15944.3| unnamed protein product [Vitis vinifera]               60   3e-07
emb|CAN78824.1| hypothetical protein VITISV_006556 [Vitis vinifera]    60   3e-07
ref|XP_006843575.1| hypothetical protein AMTR_s00007p00102750 [A...    57   2e-06

>gb|AGB52036.1| putative zinc finger transcription factor, partial [Elaeis
           guineensis]
          Length = 605

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 47/92 (51%), Positives = 56/92 (60%), Gaps = 7/92 (7%)
 Frame = +2

Query: 2   SKLKKSASFAFRNNQAVHGGVSLTP------GSNEPDVSWVTSLVKDGPPVAPVGRISAG 163
           +KL+KSAS  FRNNQ   G     P      G +EPD+SWV SLVKDG P AP+GR    
Sbjct: 517 NKLRKSASLNFRNNQGGSGFGGAAPATAVPGGLDEPDLSWVQSLVKDG-PAAPIGRRGL- 574

Query: 164 KQHQKGYPLKDGGNS-HSSGFFYPWVEDKILA 256
           +Q +KGY L  GG   H S  F PW E+KI+A
Sbjct: 575 EQQRKGYKLNGGGGDFHGSELFSPW-EEKIMA 605


>ref|XP_002277632.2| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           isoform 1 [Vitis vinifera]
          Length = 693

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   SKLKKSASFAFRNNQAVHGG--VSLTPGSNEPDVSWVTSLVKDGPPVAPVGRISAGKQHQ 175
           +KL+KSASF FR+N + +     S+   ++EPDVSWV SLVK+ P   P G+    +QHQ
Sbjct: 608 NKLRKSASFGFRSNGSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARP-GQFGYEEQHQ 666

Query: 176 KGYPLKDGGNSHSSGFFYPWVE 241
             Y L  GG    S    PWVE
Sbjct: 667 --YHLNSGG----SEILPPWVE 682


>emb|CBI15944.3| unnamed protein product [Vitis vinifera]
          Length = 752

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2   SKLKKSASFAFRNNQAVHGG--VSLTPGSNEPDVSWVTSLVKDGPPVAPVGRISAGKQHQ 175
           +KL+KSASF FR+N + +     S+   ++EPDVSWV SLVK+ P   P G+    +QHQ
Sbjct: 667 NKLRKSASFGFRSNGSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARP-GQFGYEEQHQ 725

Query: 176 KGYPLKDGGNSHSSGFFYPWVE 241
             Y L  GG    S    PWVE
Sbjct: 726 --YHLNSGG----SEILPPWVE 741


>emb|CAN78824.1| hypothetical protein VITISV_006556 [Vitis vinifera]
          Length = 893

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
 Frame = +2

Query: 2    SKLKKSASFAFRNNQAVHGG--VSLTPGSNEPDVSWVTSLVKDGPPVAPVGRISAGKQHQ 175
            +KL+KSASF FR+N + +     S+   ++EPDVSWV SLVK+ P   P G+    +QHQ
Sbjct: 808  NKLRKSASFGFRSNGSSYAAQAASVPAAADEPDVSWVQSLVKEAPSARP-GQFGYEEQHQ 866

Query: 176  KGYPLKDGGNSHSSGFFYPWVE 241
              Y L  GG    S    PWVE
Sbjct: 867  --YHLNSGG----SEILPPWVE 882


>ref|XP_006843575.1| hypothetical protein AMTR_s00007p00102750 [Amborella trichopoda]
           gi|548845943|gb|ERN05250.1| hypothetical protein
           AMTR_s00007p00102750 [Amborella trichopoda]
          Length = 695

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/49 (59%), Positives = 35/49 (71%)
 Frame = +2

Query: 2   SKLKKSASFAFRNNQAVHGGVSLTPGSNEPDVSWVTSLVKDGPPVAPVG 148
           SKL+KSASF FR+N  VHGG       ++PDVSWV SLVKDGP  + +G
Sbjct: 613 SKLRKSASFGFRSNGVVHGG-------DDPDVSWVQSLVKDGPASSRLG 654


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