BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00014030
         (344 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...    69   6e-10
ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]      64   3e-08
ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily p...    64   3e-08
ref|XP_001754449.1| predicted protein [Physcomitrella patens] gi...    63   4e-08
gb|EOY08235.1| Pentatricopeptide repeat superfamily protein [The...    62   6e-08
ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Caps...    62   6e-08
ref|XP_006596427.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containi...    62   8e-08
ref|XP_006444301.1| hypothetical protein CICLE_v10024503mg [Citr...    62   8e-08
ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutr...    62   8e-08
ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Popu...    62   1e-07
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr...    62   1e-07
emb|CBI22025.3| unnamed protein product [Vitis vinifera]               62   1e-07
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
gb|ESW14194.1| hypothetical protein PHAVU_008G260600g [Phaseolus...    61   1e-07

>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 37/92 (40%), Positives = 55/92 (59%)
 Frame = +2

Query: 68  AIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHM 247
           AI  DIQ  A  G+LK+A+  L      G PV P  F S+LR C ++ SL  G+Q+H H+
Sbjct: 118 AIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHI 177

Query: 248 VVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
            +   + + F+   L+++Y  CGSL+D+R VF
Sbjct: 178 RINGLENNEFLRTKLVHMYTSCGSLEDARGVF 209


>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 33/84 (39%), Positives = 55/84 (65%)
 Frame = +2

Query: 92  LASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVTCFDQD 271
           L   GRL +A+ +L L    G  V P+ F+S+L+ C D +S+ +GR++HAH  +   +++
Sbjct: 49  LCKKGRLNEAVSALELIAQHGSKVSPKTFISLLQSCIDCNSVTLGRKVHAHFHLV-QEKN 107

Query: 272 PFVCNHLINVYGKCGSLDDSRWVF 343
           PF+   L+++Y KCGSL D+R +F
Sbjct: 108 PFLETKLVSMYAKCGSLSDARKLF 131


>ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Solanum lycopersicum]
          Length = 674

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/92 (33%), Positives = 52/92 (56%)
 Frame = +2

Query: 68  AIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHM 247
           AI +DIQ  A   +LK+A+  L    H G PV P  F S++  C    SL   + +H H+
Sbjct: 67  AIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASLIAACVRLKSLTSAKIVHTHV 126

Query: 248 VVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
           ++   + + F+   ++N+Y  CGS++D++ VF
Sbjct: 127 IINGLENNEFLQTKVVNMYAACGSIEDAKKVF 158


>ref|XP_004237632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Solanum lycopersicum]
          Length = 914

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/87 (40%), Positives = 46/87 (52%)
 Frame = +2

Query: 83  IQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVTCF 262
           I   +  G  KDAI   +    LG       F S+L+ C+    L +G+QLH  +VVT F
Sbjct: 110 ISGYSQNGFGKDAIWGFLKMHSLGLRCNEFTFPSVLKACSTEKELCLGKQLHGVVVVTGF 169

Query: 263 DQDPFVCNHLINVYGKCGSLDDSRWVF 343
           D D FV N L+ +Y KCG   DSR +F
Sbjct: 170 DSDVFVANTLVVMYAKCGEFVDSRMLF 196


>gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]
          Length = 880

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
 Frame = +2

Query: 8   PAITRIFSTSAS---PQASIKALAIPQDIQSLASAGRLKDAIRSL--ILRRHLGRPVYPE 172
           P +  I  T A    P      ++    +  L   GRL DA+ +L  I  R     + P 
Sbjct: 13  PPVLPIIPTKAGIIQPSEFSTTISFDSHLDKLCRDGRLSDAVAALDAIAERGSKVKLKPR 72

Query: 173 CFVSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
            ++++L+ C D +S+ +GR+LHA M+      +PFV   L+++Y KCG L D+R VF
Sbjct: 73  TYMNLLQSCIDTNSIELGRKLHARMMGLVQYVNPFVETKLVSMYAKCGCLHDARRVF 129


>ref|XP_006357349.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565382025|ref|XP_006357350.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565382027|ref|XP_006357351.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 918

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/87 (40%), Positives = 46/87 (52%)
 Frame = +2

Query: 83  IQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVTCF 262
           I   +  G  KDAI   +    LG       F S+L+ C+    L +G+QLH  +VVT F
Sbjct: 114 ISGYSQNGFGKDAIWGFLKMHSLGLRCNEFTFPSVLKACSIEKELFLGKQLHGVVVVTGF 173

Query: 263 DQDPFVCNHLINVYGKCGSLDDSRWVF 343
           D D FV N L+ +Y KCG   DSR +F
Sbjct: 174 DSDVFVANTLVVMYAKCGEFVDSRMLF 200


>gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 683

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = +2

Query: 68  AIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHM 247
           AI +DIQ  A   +LK+A+  L      G PV P  F S+L  C  + SL  GRQ+H+H+
Sbjct: 76  AIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLAACVRSKSLADGRQIHSHI 135

Query: 248 VVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
                + + F+   L ++Y  CGS+DD+  VF
Sbjct: 136 RTNGLENNEFLRAKLAHMYTSCGSIDDALRVF 167


>ref|XP_001754449.1| predicted protein [Physcomitrella patens]
           gi|162694551|gb|EDQ80899.1| predicted protein
           [Physcomitrella patens]
          Length = 723

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 34/96 (35%), Positives = 56/96 (58%)
 Frame = +2

Query: 56  IKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQL 235
           ++ LA  +D+  L   GRLK+A+  +      G  VY + F  +L+ CA   SL  GR++
Sbjct: 10  VETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREV 69

Query: 236 HAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
           HA ++ +    + ++ N L+++Y KCGSL D+R VF
Sbjct: 70  HAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVF 105


>gb|EOY08235.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 693

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
 Frame = +2

Query: 11  AITRIFSTSASPQASIKALAIPQDIQSLASAG----------RLKDAIRSLILRRHLGRP 160
           A+T ++S      +++    I  + +++ S            R++DA+   +  +  G  
Sbjct: 259 ALTDMYSKVEDMDSALNVFGIDSECRNVVSCSSLIDGYVEMDRVEDALSVFVELQRRGIE 318

Query: 161 VYPECFVSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWV 340
                F S+++ CA   SL  G QLHA ++   FD +PFV + L+++YGKCG LDDS  V
Sbjct: 319 SNEFTFSSLIKACASQASLEQGAQLHAQVIKFNFDGNPFVSSGLVDMYGKCGLLDDSIQV 378

Query: 341 F 343
           F
Sbjct: 379 F 379


>ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Capsella rubella]
           gi|482569787|gb|EOA33975.1| hypothetical protein
           CARUB_v10021470mg [Capsella rubella]
          Length = 688

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/103 (33%), Positives = 55/103 (53%)
 Frame = +2

Query: 35  SASPQASIKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADS 214
           S+ P  S    +I +DIQS A    L+DA+  L      G PV    F ++L  C    S
Sbjct: 66  SSLPLHSKNPCSIHRDIQSFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACVRRKS 125

Query: 215 LLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
           L+ G+Q+H H+ +   + + F+   L+++Y  CGS+ D++ VF
Sbjct: 126 LIHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 168


>ref|XP_006596427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Glycine max]
          Length = 896

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = +2

Query: 5   WPAITRIFSTSASPQASIKA--LAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECF 178
           W   TR  + S S   + ++    +   +  L + G L +A+  L      G  V P  F
Sbjct: 28  WHGSTRALANSNSVSMTQRSHPKLVDTQLNQLCANGSLSEAVAILDSLAQQGSKVRPITF 87

Query: 179 VSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
           +++L+ C D D +L+GR+LH  + +     +PFV   L+++Y KCG LD++R VF
Sbjct: 88  MNLLQACIDKDCILVGRELHTRIGLV-RKVNPFVETKLVSMYAKCGHLDEARKVF 141


>ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like isoform X1 [Glycine max]
           gi|571441335|ref|XP_006575413.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g19720-like isoform X2 [Glycine max]
          Length = 896

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
 Frame = +2

Query: 5   WPAITRIFSTSASPQASIKA--LAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECF 178
           W   TR+ + S S   + ++    I   +  L + G L +A+  L      G  V P  F
Sbjct: 28  WHGSTRVLANSNSVSITQRSNPKLIDTQLNQLCANGPLSEAVAILDSLAQQGSKVRPITF 87

Query: 179 VSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
           +++L+ C D D +L+GR+LHA + +     +PFV   L+++Y KCG LD++  VF
Sbjct: 88  MNLLQACIDKDCILVGRELHARIGLV-GKVNPFVETKLVSMYAKCGHLDEAWKVF 141


>ref|XP_006479936.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like isoform X1 [Citrus sinensis]
          Length = 605

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +2

Query: 77  QDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVT 256
           Q   SL S G+L +AI SL L    G  +  E    IL++CA++ SL +G+++H H+ +T
Sbjct: 22  QSFLSLISKGQLSEAISSLDLLAQRGIRLPAETLAFILQQCAESKSLKLGKRVHLHLKLT 81

Query: 257 -CFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
                  F+ NHLI++Y KCGS  D+R VF
Sbjct: 82  QRKTPTTFLSNHLISMYFKCGSDVDARKVF 111


>ref|XP_006444301.1| hypothetical protein CICLE_v10024503mg [Citrus clementina]
           gi|557546563|gb|ESR57541.1| hypothetical protein
           CICLE_v10024503mg [Citrus clementina]
          Length = 595

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +2

Query: 77  QDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQLHAHMVVT 256
           Q   SL S G+L +AI SL L    G  +  E    IL++CA++ SL +G+++H H+ +T
Sbjct: 23  QSFLSLISKGQLSEAISSLDLLAQRGIRLPAETLAFILQQCAESKSLKLGKRVHLHLKLT 82

Query: 257 -CFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
                  F+ NHLI++Y KCGS  D+R VF
Sbjct: 83  QRKTPTTFLSNHLISMYFKCGSDVDARKVF 112


>ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutrema salsugineum]
           gi|557087203|gb|ESQ28055.1| hypothetical protein
           EUTSA_v10019712mg [Eutrema salsugineum]
          Length = 688

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 33/103 (32%), Positives = 55/103 (53%)
 Frame = +2

Query: 35  SASPQASIKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADS 214
           S+ P  S     I +DIQ+ A   +L+DA+  L      G PV    F ++L  C    S
Sbjct: 66  SSLPLHSKNPYIIHRDIQNFARQNKLEDALTILDYLEQRGIPVNATTFSALLAACVRRKS 125

Query: 215 LLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
           L +G+Q+H H+ +   + + F+   L+++Y  CGS+ D++ VF
Sbjct: 126 LSLGKQVHVHIRINGLENNEFLGTKLVHMYTACGSIKDAQKVF 168


>ref|XP_006376183.1| hypothetical protein POPTR_0013s10600g [Populus trichocarpa]
           gi|550325453|gb|ERP53980.1| hypothetical protein
           POPTR_0013s10600g [Populus trichocarpa]
          Length = 636

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
 Frame = +2

Query: 5   WPAITRIFSTSASPQ---ASIKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPEC 175
           W    R FS+S  PQ   ++ +A  +   ++ L++ G +K+A+        L +    + 
Sbjct: 9   WYLFLRSFSSSIHPQLPNSTPEATDLFNKVRVLSTRGNIKEALSFFYSTPQLNQS--QQT 66

Query: 176 FVSILRRCADADSLLIGRQLHAHMVVTCFD--QDPFVCNHLINVYGKCGSLDDSRWVF 343
           + ++   CA   +L  G+ LH HM+       QD FV NHLIN+Y KCG LD +R VF
Sbjct: 67  YATLFHACARHGNLKQGQYLHQHMISENHKNPQDLFVTNHLINMYAKCGDLDRARQVF 124


>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/96 (36%), Positives = 54/96 (56%)
 Frame = +2

Query: 56  IKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSILRRCADADSLLIGRQL 235
           +  LA   D+  L   GRLK+A+  L      G  VY + F  +L+ CA   SL  GR++
Sbjct: 59  VDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREV 118

Query: 236 HAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
           HA ++ +    + ++ N L+++Y KCGSL D+R VF
Sbjct: 119 HAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVF 154


>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 37/112 (33%), Positives = 57/112 (50%)
 Frame = +2

Query: 8   PAITRIFSTSASPQASIKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSI 187
           P   R FST+ S  + + A     +  +L S G LK A        H+     P  F  +
Sbjct: 8   PLTRRHFSTNPSSGSELTA-----EFTNLCSKGHLKQAFDRF--SSHIWSE--PSLFSHL 58

Query: 188 LRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
           L+ C   +SL +G+QLH+ ++ +    D F+ NHL+N+Y KCG LD +  +F
Sbjct: 59  LQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110


>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 37/112 (33%), Positives = 57/112 (50%)
 Frame = +2

Query: 8   PAITRIFSTSASPQASIKALAIPQDIQSLASAGRLKDAIRSLILRRHLGRPVYPECFVSI 187
           P   R FST+ S  + + A     +  +L S G LK A        H+     P  F  +
Sbjct: 8   PLTRRHFSTNPSSGSELTA-----EFTNLCSKGHLKQAFDRF--SSHIWSE--PSLFSHL 58

Query: 188 LRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
           L+ C   +SL +G+QLH+ ++ +    D F+ NHL+N+Y KCG LD +  +F
Sbjct: 59  LQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110


>gb|ESW14194.1| hypothetical protein PHAVU_008G260600g [Phaseolus vulgaris]
          Length = 893

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
 Frame = +2

Query: 5   WPAITRIFSTSASPQASIKALAIPQ----DIQSLASAGRLKDAIRSLILRRHLGRPVYPE 172
           W   TR+ + S S   S+  L+ P+     +  L   G L +A+  L      G  V P 
Sbjct: 28  WQGSTRVLANSNS--VSMTNLSHPKLIDTQLNELCVNGHLSEAVGILDSLAQQGSKVRPI 85

Query: 173 CFVSILRRCADADSLLIGRQLHAHMVVTCFDQDPFVCNHLINVYGKCGSLDDSRWVF 343
            F+++L+ C D D + +GR+LHA  V      +PFV   L+++Y KCG L+++R VF
Sbjct: 86  TFINLLQACIDRDCIWVGRELHAR-VGLVRKVNPFVETKLVSMYAKCGLLEEARKVF 141