BLASTX nr result

ID: Zingiber25_contig00013885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00013885
         (418 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19402.3| unnamed protein product [Vitis vinifera]               60   4e-07
ref|XP_002285319.1| PREDICTED: F-box/kelch-repeat protein At5g43...    60   4e-07
gb|EOY15723.1| Galactose oxidase/kelch repeat superfamily protei...    59   9e-07

>emb|CBI19402.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
 Frame = +3

Query: 84  SYLLLSHPQFSDRCLPIYDSVADQWRSVSLPSS--FADACXXXXXXXXXXXXXXCFSL-G 254
           S+LLLSHPQF    LP+YDS    WR++SL  S     A               CFSL  
Sbjct: 210 SFLLLSHPQFYRHRLPLYDSAIGNWRNLSLTCSILLPYAATTAITLLSAANGLLCFSLPN 269

Query: 255 RSALLVANLLTSSLKILPLPVYSASSPSAVTLVSFPSPSNSKRGYKIFL 401
            S+ LV NLL  S ++L  P Y  +    +TLV  P       GYKIF+
Sbjct: 270 SSSFLVCNLLVGSSRVLQFPGYPFAF-EMLTLVPAPD------GYKIFM 311


>ref|XP_002285319.1| PREDICTED: F-box/kelch-repeat protein At5g43190-like [Vitis
           vinifera]
          Length = 372

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/109 (39%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
 Frame = +3

Query: 84  SYLLLSHPQFSDRCLPIYDSVADQWRSVSLPSS--FADACXXXXXXXXXXXXXXCFSL-G 254
           S+LLLSHPQF    LP+YDS    WR++SL  S     A               CFSL  
Sbjct: 74  SFLLLSHPQFYRHRLPLYDSAIGNWRNLSLTCSILLPYAATTAITLLSAANGLLCFSLPN 133

Query: 255 RSALLVANLLTSSLKILPLPVYSASSPSAVTLVSFPSPSNSKRGYKIFL 401
            S+ LV NLL  S ++L  P Y  +    +TLV  P       GYKIF+
Sbjct: 134 SSSFLVCNLLVGSSRVLQFPGYPFAF-EMLTLVPAPD------GYKIFM 175


>gb|EOY15723.1| Galactose oxidase/kelch repeat superfamily protein [Theobroma
           cacao]
          Length = 369

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
 Frame = +3

Query: 84  SYLLLSHPQFSDRCLPIYDSVADQWRSVSLPSSFADACXXXXXXXXXXXXXXCFSLGRS- 260
           S+LLLSHPQ      P+YD++   WR+++L  SF   C              CFSL  S 
Sbjct: 71  SFLLLSHPQCYSH-FPLYDTILGTWRNLALSFSFLPPCAAQFNLLSTSNGLFCFSLPNSC 129

Query: 261 ALLVANLLTSSLKILPLPVYSASSPSAVTLVSFPSPSNSKRGYKIFL 401
           + LV NLL  S +++  P +  +    +TLVS P       GY+IF+
Sbjct: 130 SFLVCNLLAKSSRVIQFPFFPFAF-ELLTLVSTPD------GYQIFM 169


Top