BLASTX nr result
ID: Zingiber25_contig00013649
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00013649
(554 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indi... 111 1e-22
ref|XP_006654624.1| PREDICTED: single-stranded DNA-binding prote... 110 2e-22
ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group] g... 110 2e-22
ref|XP_006654625.1| PREDICTED: single-stranded DNA-binding prote... 110 2e-22
ref|XP_006858687.1| hypothetical protein AMTR_s00066p00089800 [A... 110 3e-22
ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote... 107 1e-21
dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare] 105 7e-21
gb|EMT18609.1| Single-stranded DNA-binding protein, mitochondria... 105 9e-21
ref|XP_006288685.1| hypothetical protein CARUB_v10001995mg [Caps... 104 1e-20
ref|XP_004495682.1| PREDICTED: single-stranded DNA-binding prote... 104 2e-20
ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicag... 104 2e-20
ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho... 104 2e-20
gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula] 104 2e-20
ref|XP_004157233.1| PREDICTED: single-stranded DNA-binding prote... 103 2e-20
ref|XP_004135584.1| PREDICTED: single-stranded DNA-binding prote... 103 2e-20
ref|NP_192844.2| mitochondrially targeted single-stranded DNA bi... 103 2e-20
ref|XP_002874672.1| mitochondrially targeted single-stranded DNA... 103 2e-20
emb|CAB43041.1| putative protein [Arabidopsis thaliana] gi|72678... 103 2e-20
ref|XP_002319495.2| single-strand-binding family protein [Populu... 103 3e-20
ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote... 103 4e-20
>gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indica Group]
gi|222632182|gb|EEE64314.1| hypothetical protein
OsJ_19151 [Oryza sativa Japonica Group]
Length = 245
Score = 111 bits (277), Expect = 1e-22
Identities = 62/127 (48%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Frame = -1
Query: 386 ARFYFSSSMKLRLLRGRVLEHLKGSFAQPRFPLGHWRGSQACFSTISLXXXXXXXXXXXX 207
ARF +S L +L+ L+ Q R P+ +R SQA ST+S
Sbjct: 36 ARFTMNS------LSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGD 89
Query: 206 XXXEG--KILEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGM 33
+ LEPQ VDP+KG FRGVH+AIICGK+GQ P+QKILRNG+TVT+FTVGTGGM
Sbjct: 90 DDYTDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGTGGM 149
Query: 32 YDQRISG 12
+DQR+ G
Sbjct: 150 FDQRVVG 156
>ref|XP_006654624.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X1 [Oryza brachyantha]
Length = 212
Score = 110 bits (276), Expect = 2e-22
Identities = 65/131 (49%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
Frame = -1
Query: 386 ARFYFSSSMKLRLLRG--RVLEHLKGSFAQPRFPLGHWRGSQACFSTISLXXXXXXXXXX 213
ARF S+ + LL+G RVLE Q R P+ R SQA ST+S
Sbjct: 3 ARFTMSA-LNTGLLKGLRRVLE-------QQRKPIDFCRKSQAWSSTVSFSDLDEKNDIG 54
Query: 212 XXXXXEG--KILEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTG 39
+ LEPQ VDP+KG FRGVH+AIICGK+GQ P+QKILRNG+TVT+FT+GTG
Sbjct: 55 DDGDYTDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTIGTG 114
Query: 38 GMYDQRISGKE 6
GM+DQR++G +
Sbjct: 115 GMFDQRLAGDD 125
>ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|48475206|gb|AAT44275.1| putative single-strand DNA
binding protein [Oryza sativa Japonica Group]
gi|113579555|dbj|BAF17918.1| Os05g0509700 [Oryza sativa
Japonica Group] gi|215706976|dbj|BAG93436.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 206
Score = 110 bits (276), Expect = 2e-22
Identities = 58/114 (50%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Frame = -1
Query: 347 LRGRVLEHLKGSFAQPRFPLGHWRGSQACFSTISLXXXXXXXXXXXXXXXEG--KILEPQ 174
L +L+ L+ Q R P+ +R SQA ST+S + LEPQ
Sbjct: 4 LSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGDDDYTDSRRELEPQ 63
Query: 173 GVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISG 12
VDP+KG FRGVH+AIICGK+GQ P+QKILRNG+TVT+FTVGTGGM+DQR+ G
Sbjct: 64 SVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGTGGMFDQRVVG 117
>ref|XP_006654625.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform X2 [Oryza brachyantha]
Length = 206
Score = 110 bits (275), Expect = 2e-22
Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 4/125 (3%)
Frame = -1
Query: 368 SSMKLRLLRG--RVLEHLKGSFAQPRFPLGHWRGSQACFSTISLXXXXXXXXXXXXXXXE 195
S++ LL+G RVLE Q R P+ R SQA ST+S
Sbjct: 2 SALNTGLLKGLRRVLE-------QQRKPIDFCRKSQAWSSTVSFSDLDEKNDIGDDGDYT 54
Query: 194 G--KILEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQR 21
+ LEPQ VDP+KG FRGVH+AIICGK+GQ P+QKILRNG+TVT+FT+GTGGM+DQR
Sbjct: 55 DSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTIGTGGMFDQR 114
Query: 20 ISGKE 6
++G +
Sbjct: 115 LAGDD 119
>ref|XP_006858687.1| hypothetical protein AMTR_s00066p00089800 [Amborella trichopoda]
gi|548862798|gb|ERN20154.1| hypothetical protein
AMTR_s00066p00089800 [Amborella trichopoda]
Length = 255
Score = 110 bits (274), Expect = 3e-22
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISGKE 6
L+PQGVDP++G FRGVHKAIICGKIGQ P+QKILRNG+TVTIFTVGTGGM+DQRI G E
Sbjct: 25 LQPQGVDPKRGWAFRGVHKAIICGKIGQPPVQKILRNGRTVTIFTVGTGGMFDQRILGSE 84
Query: 5 H 3
H
Sbjct: 85 H 85
>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
protein product [Vitis vinifera]
Length = 208
Score = 107 bits (268), Expect = 1e-21
Identities = 49/60 (81%), Positives = 55/60 (91%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISGKE 6
L+ QGVDP KG FRGVHKAIICGK+GQAP+QKILRNG+TVTIFTVGTGGM+DQRI GK+
Sbjct: 62 LQLQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIGGKD 121
>dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 105 bits (262), Expect = 7e-21
Identities = 46/58 (79%), Positives = 54/58 (93%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISG 12
LEPQ VDP+KG FRGVH+AIICGK+GQAP+QKILRNG+TVTIFT+GTGGM+DQR+ G
Sbjct: 60 LEPQSVDPKKGWGFRGVHRAIICGKVGQAPVQKILRNGRTVTIFTIGTGGMFDQRVIG 117
>gb|EMT18609.1| Single-stranded DNA-binding protein, mitochondrial [Aegilops
tauschii]
Length = 254
Score = 105 bits (261), Expect = 9e-21
Identities = 45/58 (77%), Positives = 54/58 (93%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISG 12
LEPQ VDP+KG FRGVH+AIICGK+GQAP+QKILRNG+T+TIFT+GTGGM+DQR+ G
Sbjct: 77 LEPQSVDPKKGWGFRGVHRAIICGKVGQAPVQKILRNGRTITIFTIGTGGMFDQRVIG 134
>ref|XP_006288685.1| hypothetical protein CARUB_v10001995mg [Capsella rubella]
gi|482557391|gb|EOA21583.1| hypothetical protein
CARUB_v10001995mg [Capsella rubella]
Length = 202
Score = 104 bits (260), Expect = 1e-20
Identities = 46/58 (79%), Positives = 54/58 (93%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISG 12
L+PQGVDP KG FRGVH+AIICGK+GQ+P+QKILRNG+TVTIFTVGTGGM+DQR+ G
Sbjct: 56 LQPQGVDPRKGWGFRGVHRAIICGKVGQSPLQKILRNGRTVTIFTVGTGGMFDQRLVG 113
>ref|XP_004495682.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cicer arietinum]
Length = 213
Score = 104 bits (259), Expect = 2e-20
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISGKE 6
L+ QGVDP +G FRGVHKAIICGK+GQAP+QKILRNGK VTIFTVGTGGMYDQRI G +
Sbjct: 67 LQLQGVDPRRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMYDQRIVGSK 126
>ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355480238|gb|AES61441.1| Single-stranded DNA-binding
protein [Medicago truncatula]
gi|388493454|gb|AFK34793.1| unknown [Medicago
truncatula]
Length = 212
Score = 104 bits (259), Expect = 2e-20
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISGKE 6
L+ QGVDP +G FRGVHKAIICGK+GQAP+QKILRNGK VTIFTVGTGGMYDQRI G +
Sbjct: 66 LQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMYDQRIVGSK 125
>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
Single-stranded DNA-binding protein, mitochondrial
precursor, putative [Ricinus communis]
Length = 213
Score = 104 bits (259), Expect = 2e-20
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISG 12
L+ QGVDP KG FRGVHKAIICGK+GQAP+QKILRNG+TVTIFTVGTGGM+DQRI G
Sbjct: 67 LQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIVG 124
>gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]
Length = 216
Score = 104 bits (259), Expect = 2e-20
Identities = 48/60 (80%), Positives = 53/60 (88%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISGKE 6
L+ QGVDP +G FRGVHKAIICGK+GQAP+QKILRNGK VTIFTVGTGGMYDQRI G +
Sbjct: 66 LQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTVGTGGMYDQRIVGSK 125
>ref|XP_004157233.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 103 bits (258), Expect = 2e-20
Identities = 45/56 (80%), Positives = 53/56 (94%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRI 18
L+PQGVDP +G +RGVHKAIICG++GQAP+QKILRNG+T+TIFTVGTGGMYDQRI
Sbjct: 64 LQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRI 119
>ref|XP_004135584.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 103 bits (258), Expect = 2e-20
Identities = 45/56 (80%), Positives = 53/56 (94%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRI 18
L+PQGVDP +G +RGVHKAIICG++GQAP+QKILRNG+T+TIFTVGTGGMYDQRI
Sbjct: 64 LQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRI 119
>ref|NP_192844.2| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis thaliana] gi|38258307|sp|Q84J78.1|SSB_ARATH
RecName: Full=Single-stranded DNA-binding protein,
mitochondrial; Flags: Precursor
gi|28393531|gb|AAO42186.1| unknown protein [Arabidopsis
thaliana] gi|28827408|gb|AAO50548.1| unknown protein
[Arabidopsis thaliana] gi|34556071|emb|CAE46651.1|
single-stranded DNA binding protein [Arabidopsis
thaliana] gi|332657567|gb|AEE82967.1| mitochondrially
targeted single-stranded DNA binding protein
[Arabidopsis thaliana]
Length = 201
Score = 103 bits (258), Expect = 2e-20
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISG 12
L+P GVDP KG FRGVH+AIICGK+GQAP+QKILRNG+TVTIFTVGTGGM+DQR+ G
Sbjct: 55 LQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVG 112
>ref|XP_002874672.1| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
gi|297320509|gb|EFH50931.1| mitochondrially targeted
single-stranded DNA binding protein [Arabidopsis lyrata
subsp. lyrata]
Length = 201
Score = 103 bits (258), Expect = 2e-20
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISG 12
L+P GVDP KG FRGVH+AIICGK+GQAP+QKILRNG+TVTIFTVGTGGM+DQR+ G
Sbjct: 55 LQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVG 112
>emb|CAB43041.1| putative protein [Arabidopsis thaliana] gi|7267804|emb|CAB81207.1|
putative protein [Arabidopsis thaliana]
Length = 254
Score = 103 bits (258), Expect = 2e-20
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISG 12
L+P GVDP KG FRGVH+AIICGK+GQAP+QKILRNG+TVTIFTVGTGGM+DQR+ G
Sbjct: 55 LQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVG 112
>ref|XP_002319495.2| single-strand-binding family protein [Populus trichocarpa]
gi|550324675|gb|EEE95418.2| single-strand-binding family
protein [Populus trichocarpa]
Length = 215
Score = 103 bits (257), Expect = 3e-20
Identities = 53/101 (52%), Positives = 65/101 (64%), Gaps = 6/101 (5%)
Frame = -1
Query: 290 LGHWRGSQACFSTISLXXXXXXXXXXXXXXXEGKILEP------QGVDPEKGGNFRGVHK 129
+G R ++C+ST+S +L QGVDP KG FRGVH+
Sbjct: 27 VGLQRSLRSCYSTVSFNSDNEEGKNDKVEEEFDDLLGDRRESRFQGVDPRKGWEFRGVHR 86
Query: 128 AIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISGKE 6
AIICGK+GQAP+QKILRNG+TVTIFTVGTGGM+DQRI G +
Sbjct: 87 AIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIIGSK 127
>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Glycine max]
Length = 217
Score = 103 bits (256), Expect = 4e-20
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 185 LEPQGVDPEKGGNFRGVHKAIICGKIGQAPIQKILRNGKTVTIFTVGTGGMYDQRISG 12
L+ QGVDP+KG FRGVHKAIICGK+GQAP+QKILRNG+ +TIFTVGTGGM+DQRI G
Sbjct: 71 LQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTVGTGGMFDQRIQG 128