BLASTX nr result

ID: Zingiber25_contig00013555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00013555
         (539 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD09612.1| putative NAC2 protein [Oryza sativa Japonica Gro...    58   1e-06
ref|NP_001062518.1| Os08g0562200 [Oryza sativa Japonica Group] g...    58   1e-06
gb|EAZ08024.1| hypothetical protein OsI_30288 [Oryza sativa Indi...    58   1e-06

>dbj|BAD09612.1| putative NAC2 protein [Oryza sativa Japonica Group]
           gi|45736181|dbj|BAD13227.1| putative NAC2 protein [Oryza
           sativa Japonica Group] gi|215697582|dbj|BAG91576.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 618

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
 Frame = -2

Query: 484 EKRHSFSDCGHNHNNPNVKEEYAELSDLADTMTVTNPSYQES-----DSYPMKSCHAQDM 320
           E   S ++ G   N  +  + + EL D AD   + NP   ES     D +P KS     M
Sbjct: 290 ENMFSSANAGDLFNISSPNDGFLELKDFADIADLENPLANESTIWPSDGWPWKS--TDSM 347

Query: 319 DGINEDINLEKVLDVEEFFDSMSEDADHPEQQQISLLEDNIYVPPNDLDSVDDRCPSDQD 140
           + +N   N    L  E+ F     +      Q+ S +   I  PP+   S+ +    ++D
Sbjct: 348 EAVNGASNEFSPLAGEQIFQPEELEQLLQSLQEDSHMGSTISDPPHS--SITNLAKPEED 405

Query: 139 KMALCEAPSNLFLHEN--TELNGFLYSPTLEPSGFEMFDDLLAYFDA 5
            +   +AP +  + ++   +LNGFL SP+   SG +M DD + Y+DA
Sbjct: 406 CLMFYDAPFDSSMCDDGFRQLNGFLGSPSTNLSGIDMVDDGMPYYDA 452


>ref|NP_001062518.1| Os08g0562200 [Oryza sativa Japonica Group]
           gi|42408429|dbj|BAD09611.1| putative NAC2 protein [Oryza
           sativa Japonica Group] gi|45736180|dbj|BAD13226.1|
           putative NAC2 protein [Oryza sativa Japonica Group]
           gi|113624487|dbj|BAF24432.1| Os08g0562200 [Oryza sativa
           Japonica Group] gi|125604344|gb|EAZ43669.1| hypothetical
           protein OsJ_28294 [Oryza sativa Japonica Group]
           gi|215704602|dbj|BAG94230.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215767937|dbj|BAH00166.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 656

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
 Frame = -2

Query: 484 EKRHSFSDCGHNHNNPNVKEEYAELSDLADTMTVTNPSYQES-----DSYPMKSCHAQDM 320
           E   S ++ G   N  +  + + EL D AD   + NP   ES     D +P KS     M
Sbjct: 290 ENMFSSANAGDLFNISSPNDGFLELKDFADIADLENPLANESTIWPSDGWPWKS--TDSM 347

Query: 319 DGINEDINLEKVLDVEEFFDSMSEDADHPEQQQISLLEDNIYVPPNDLDSVDDRCPSDQD 140
           + +N   N    L  E+ F     +      Q+ S +   I  PP+   S+ +    ++D
Sbjct: 348 EAVNGASNEFSPLAGEQIFQPEELEQLLQSLQEDSHMGSTISDPPHS--SITNLAKPEED 405

Query: 139 KMALCEAPSNLFLHEN--TELNGFLYSPTLEPSGFEMFDDLLAYFDA 5
            +   +AP +  + ++   +LNGFL SP+   SG +M DD + Y+DA
Sbjct: 406 CLMFYDAPFDSSMCDDGFRQLNGFLGSPSTNLSGIDMVDDGMPYYDA 452


>gb|EAZ08024.1| hypothetical protein OsI_30288 [Oryza sativa Indica Group]
          Length = 656

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
 Frame = -2

Query: 484 EKRHSFSDCGHNHNNPNVKEEYAELSDLADTMTVTNPSYQES-----DSYPMKSCHAQDM 320
           E   S ++ G   N  +  + + EL D AD   + NP   ES     D +P KS     M
Sbjct: 290 ENMFSSANAGDLFNISSPNDGFLELKDFADIADLENPLANESTIWPSDGWPWKS--TDSM 347

Query: 319 DGINEDINLEKVLDVEEFFDSMSEDADHPEQQQISLLEDNIYVPPNDLDSVDDRCPSDQD 140
           + +N   N    L  E+ F     +      Q+ S +   I  PP+   S+ +    ++D
Sbjct: 348 EAVNGASNEFSPLAGEQIFQPEELEQLLQSLQEDSHMGSTISDPPHS--SITNLAKPEED 405

Query: 139 KMALCEAPSNLFLHEN--TELNGFLYSPTLEPSGFEMFDDLLAYFDA 5
            +   +AP +  + ++   +LNGFL SP+   SG +M DD + Y+DA
Sbjct: 406 CLMFYDAPFDSSMCDDGFRQLNGFLGSPSTNLSGIDMVDDGMPYYDA 452


Top