BLASTX nr result

ID: Zingiber25_contig00013234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00013234
         (2663 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   667   0.0  
gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indi...   657   0.0  
ref|XP_006488870.1| PREDICTED: putative pentatricopeptide repeat...   657   0.0  
gb|EOY06667.1| Pentatricopeptide (PPR) domain protein 40, putati...   657   0.0  
gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sat...   657   0.0  
ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat...   650   0.0  
ref|XP_004953323.1| PREDICTED: putative pentatricopeptide repeat...   637   e-180
tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea m...   635   e-179
ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group] g...   634   e-179
ref|NP_188314.1| pentatricopeptide repeat-containing protein [Ar...   627   e-177
tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea m...   627   e-176
ref|XP_004299932.1| PREDICTED: putative pentatricopeptide repeat...   624   e-176
gb|EXB55746.1| hypothetical protein L484_007742 [Morus notabilis]     622   e-175
ref|XP_006297164.1| hypothetical protein CARUB_v10013169mg [Caps...   619   e-174
ref|XP_006406795.1| hypothetical protein EUTSA_v10022362mg [Eutr...   618   e-174
ref|XP_004509597.1| PREDICTED: putative pentatricopeptide repeat...   617   e-174
ref|XP_006858848.1| hypothetical protein AMTR_s00066p00184190 [A...   616   e-173
ref|XP_002885175.1| pentatricopeptide repeat-containing protein ...   614   e-173
ref|XP_006355396.1| PREDICTED: putative pentatricopeptide repeat...   608   e-171
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   606   e-170

>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  667 bits (1720), Expect = 0.0
 Identities = 316/627 (50%), Positives = 442/627 (70%)
 Frame = +1

Query: 40   AKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQNPLFCFRLYIWAAN 219
            +KP+DH   + +LS+ D  L L+ E +    +L+   + S+LQN +NPL+  + YIW +N
Sbjct: 79   SKPIDHHYFSRILSRHDWFLLLNHEFKAKRITLNSHSVASVLQNQENPLYPLKFYIWVSN 138

Query: 220  FDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCMLFSSWGRLGLA 399
             D   A   SV+ VL + L+RKGP++L+ +L+K+++ SGYR+ E++LC+L  SWGRLGLA
Sbjct: 139  MDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILIGSWGRLGLA 198

Query: 400  KYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNAL 579
            KY +EIFGQ+  LG+ P+TRLYN++I+ALV++NSLDLAY KFQQM +DNC PDRFTYN L
Sbjct: 199  KYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNIL 258

Query: 580  IHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKV 759
            IHGVC+ G+VDEALRL+KQME  G  PNVFTYT+L+DGF NAKKV EA +VLETMK RKV
Sbjct: 259  IHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKV 318

Query: 760  SPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATE 939
            SP+EAT R+ IHG FRC+   KA++    + E+  ++    C T+L CLS+ NMA EA  
Sbjct: 319  SPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLLCCLSSKNMAREAGA 378

Query: 940  FLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLL 1119
             L K G+ G   D+ TF + + C +K   L++VC +L+ +VE+G K GFSTYL ++K L 
Sbjct: 379  LLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFSTYLALIKALY 438

Query: 1120 EEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLI 1299
                V E + Y  +M+ DG L +V SYN +IDCF K  M+D A    ++M+ +G  PNL+
Sbjct: 439  MAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLV 498

Query: 1300 TFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEM 1479
            TFNTLI G+ K G+  K+R +LV LLEHG KPD+ TFS++IDGLC+A +I+DA  CF+EM
Sbjct: 499  TFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEM 558

Query: 1480 VEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEKF 1659
            V WG+SPNA+TYN LI SLC +G++ +SMKL ++M+++GI+PD+FS+N LI S CR+ K 
Sbjct: 559  VMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKV 618

Query: 1660 ERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYSLV 1839
            E A+ LFS+ML  G++PD  TY +FIK  C +GR   AKE    ME +   P+S + +++
Sbjct: 619  EDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNII 678

Query: 1840 ADTLIRIGKPAEAEEFIRKCKRKGIRI 1920
             D L++  +   A++  + C   GI +
Sbjct: 679  LDALVKQDQFEAAQKIAKTCSEWGILV 705



 Score =  110 bits (274), Expect = 4e-21
 Identities = 89/385 (23%), Positives = 157/385 (40%)
 Frame = +1

Query: 349  EDVLCMLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQ 528
            + +LC L S      +A+ A  +  +   +G +P +  +N  +  L++   L+       
Sbjct: 361  DTLLCCLSSK----NMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILD 416

Query: 529  QMPSDNCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAK 708
            +           TY ALI  +   G V E      QM   G   NV +Y M++D FC   
Sbjct: 417  RFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTS 476

Query: 709  KVAEACQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCS 888
             + +A    + M+ + + PN  TF  LI G   C G                    ++C 
Sbjct: 477  MMDKATNTFKEMQYKGIPPNLVTFNTLIDGY--CKGG-------------------EIC- 514

Query: 889  TMLHCLSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVER 1068
                         ++ + L  + E G   D  TF  ++    ++ ++       +  V  
Sbjct: 515  -------------KSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMW 561

Query: 1069 GGKPGFSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNA 1248
            G  P   TY I++  L     V  + + LRKM  DG    V S+N LI  F ++G +++A
Sbjct: 562  GLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDA 621

Query: 1249 VEILEQMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDG 1428
             ++   M + G  P+  T+   I  F ++G  ++A+ + + +  +G  PD  T + ++D 
Sbjct: 622  KKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDA 681

Query: 1429 LCQAHRIDDAFNCFNEMVEWGISPN 1503
            L +  + + A        EWGI  N
Sbjct: 682  LVKQDQFEAAQKIAKTCSEWGILVN 706


>gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
          Length = 696

 Score =  657 bits (1696), Expect = 0.0
 Identities = 320/640 (50%), Positives = 448/640 (70%), Gaps = 8/640 (1%)
 Frame = +1

Query: 1    PLISSGITQQAASAK-PLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLL---- 165
            P  SS  T+ AA+   P D  R AS+L++ D    L++E     P L PR +V  L    
Sbjct: 30   PPRSSLSTKSAANPPDPADPARAASILAEDDWFPRLNAEFAAALPRLGPRFVVRALRAAA 89

Query: 166  --QNLQNPLFCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGY 339
              + +  PL C RLY+WA+ F A  A    VRR L   LWR+GP++L+  L+ EVR  G 
Sbjct: 90   EREGVGEPLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGC 149

Query: 340  RLTEDVLCMLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYF 519
             ++E+++C L  SWGRLGLA+YA+E+F Q+P LGLRP+T +YN++I A VRA ++D AY 
Sbjct: 150  EVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYL 209

Query: 520  KFQQMPSDNCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFC 699
            +FQQMP+D C PDRFTYN+L+HGVC+RGIVDEA+RL++QME  G  PNVFTYTMLVDGFC
Sbjct: 210  RFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFC 269

Query: 700  NAKKVAEACQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQ 879
            NA +V EA ++L+ MK++ V+P+EAT+R L+HG FRC+   KAY+ LS +      +   
Sbjct: 270  NAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPS 329

Query: 880  VCSTMLHCLSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSY 1059
             C TML+CLS  +MA EA EF  +M  RG   D+  FG+V++C+LK L +S +CE+L+S+
Sbjct: 330  ACHTMLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSF 389

Query: 1060 VERGGKPGFSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGML 1239
            ++ GG PGF  Y++V+K LL  K+  +A+ YL  M+L G LSSV SYN +IDCFVK G +
Sbjct: 390  IKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV 449

Query: 1240 DNAVEILEQMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSAL 1419
            D A EI+++M+++GF PNL+TFNTLISG+SK G+   A+ +L  L+EHG  PD++TF++L
Sbjct: 450  DKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSL 509

Query: 1420 IDGLCQAHRIDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGI 1599
            IDGLC  H++DDAF CF EM EWG+ PNA TYN L+ +LC+ G+++K++ L  +M+ +G+
Sbjct: 510  IDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGV 569

Query: 1600 DPDIFSYNPLILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKE 1779
             PD +S+N LILS CR+ K ++A+ +F+ M+RFGVVPD+ TY S IKALCD  R+  AKE
Sbjct: 570  TPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKE 629

Query: 1780 AMRVMELHSIS-PNSQSYSLVADTLIRIGKPAEAEEFIRK 1896
             +   E    S  N+QSY  +   L ++G+ +EA E + K
Sbjct: 630  ILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDK 669


>ref|XP_006488870.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like [Citrus sinensis]
          Length = 721

 Score =  657 bits (1695), Expect = 0.0
 Identities = 316/636 (49%), Positives = 452/636 (71%)
 Frame = +1

Query: 7    ISSGITQQAASAKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQNPL 186
            +SS      +  K +DH  ++  L++KD  L L  EL+    +L PR+ VS+LQN +NP+
Sbjct: 78   LSSNHVSPHSDVKLIDHHYISQALARKDWFLLLSHELKANRINLVPRVAVSILQNQENPI 137

Query: 187  FCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCM 366
               R YIWA+N +  LA   SV+ VLG+VL R GP+IL+ +L+K+++ SG+++ ED+LC+
Sbjct: 138  HSLRFYIWASNINLLLAKDQSVKGVLGNVLHRMGPVILSVELLKDIKNSGFQIGEDLLCV 197

Query: 367  LFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDN 546
            L  SWGRLGLAKY  +IFGQ+  LG+ P+TRLYN++I+ALV++NS+DLAY KFQQM  D 
Sbjct: 198  LIGSWGRLGLAKYCADIFGQISFLGISPSTRLYNAVIDALVKSNSIDLAYLKFQQMSVDQ 257

Query: 547  CSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEAC 726
            C PDRFTYN LIHGVC+ G+VDEALRL+KQME  G  PNV+TYT+L+DGFCNAK+VAE  
Sbjct: 258  CKPDRFTYNILIHGVCRIGVVDEALRLVKQMEGLGYAPNVYTYTILIDGFCNAKRVAEVF 317

Query: 727  QVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCL 906
            +VLE MK+R V PNEAT R+L+HG FRC+   KA++ L R+ E+  L  + VC+T+L+ L
Sbjct: 318  RVLEIMKERNVCPNEATVRSLVHGVFRCLDPHKAFELLIRFMEREPLTQKLVCNTLLYRL 377

Query: 907  STNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGF 1086
            S N+MA EA   L KMG+RG   ++ TF   V C +  L L++ C +L+++++RG KP F
Sbjct: 378  SNNSMASEAAAILRKMGDRGYLPESSTFDYTVTCLVTGLDLNETCGILDTFIKRGVKPRF 437

Query: 1087 STYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQ 1266
            STYL++++ L +    VE  +YL  +  D  +S+V SYN +IDCF K+ M+D A EI  +
Sbjct: 438  STYLLLMEALYKAGRDVEGDRYLNHVFKDRLVSNVNSYNMVIDCFCKVNMMDRATEICRE 497

Query: 1267 MRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHR 1446
            MR++   PNL+TFNTLISG  K  +  K R +LV LLE G KPD  TF+++ID LC+AHR
Sbjct: 498  MRDRDIAPNLVTFNTLISGHCKDAEVHKTRELLVMLLECGFKPDKFTFNSMIDCLCRAHR 557

Query: 1447 IDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNP 1626
             +DA +C +EMVEWG+ PN ITYN LIRSLCA+G++ +S++LFQ+M+++ I PDI+++N 
Sbjct: 558  FEDALDCLSEMVEWGVPPNTITYNILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNA 617

Query: 1627 LILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHS 1806
            LI S CR+ K E+A+  F +ML  G+ PD  +Y++ IKAL  +GR + AK+    ME + 
Sbjct: 618  LIQSFCRMNKIEKAEKAFFSMLTLGLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNG 677

Query: 1807 ISPNSQSYSLVADTLIRIGKPAEAEEFIRKCKRKGI 1914
             +P+S + +L+ +TL++ G+  EA + ++  K +GI
Sbjct: 678  CNPDSYTSNLILETLVQQGRFEEAHDIVKTSKERGI 713



 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 36/133 (27%), Positives = 68/133 (51%)
 Frame = +1

Query: 364 MLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSD 543
           +L  S   +G    +  +F ++    + P    +N++I++  R N ++ A   F  M + 
Sbjct: 582 ILIRSLCAIGDVARSLRLFQKMQADRISPDIYTFNALIQSFCRMNKIEKAEKAFFSMLTL 641

Query: 544 NCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEA 723
              PD F+Y+ALI  + K G  DEA +    ME +GC P+ +T  ++++      +  EA
Sbjct: 642 GLRPDNFSYSALIKALIKSGRFDEAKQTFLSMEQNGCNPDSYTSNLILETLVQQGRFEEA 701

Query: 724 CQVLETMKQRKVS 762
             +++T K+R +S
Sbjct: 702 HDIVKTSKERGIS 714


>gb|EOY06667.1| Pentatricopeptide (PPR) domain protein 40, putative [Theobroma cacao]
          Length = 679

 Score =  657 bits (1695), Expect = 0.0
 Identities = 315/624 (50%), Positives = 446/624 (71%)
 Frame = +1

Query: 49   LDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQNPLFCFRLYIWAANFDA 228
            ++H  ++ +LS+ D  L L+ EL+     L+P+ +VSLLQN +NPL+  R YIW +N D 
Sbjct: 50   INHHYISQILSRNDWFLLLNHELKAKRIVLNPQFVVSLLQNQENPLYPLRFYIWVSNIDP 109

Query: 229  KLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCMLFSSWGRLGLAKYA 408
              A + SV+ VL   L+RKGP++L+ +L+K++R SG  +TED+LC+L  SWGRLGLAKY 
Sbjct: 110  LFAKNQSVKGVLATALYRKGPVLLSVELVKDIRNSGLVVTEDLLCILIGSWGRLGLAKYC 169

Query: 409  NEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALIHG 588
             EIFGQ+  LG+ P+TRLYN++I+AL+++NSLDLAY KFQQM +DNC PDRFTYN LIHG
Sbjct: 170  AEIFGQISFLGISPSTRLYNAVIDALIKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHG 229

Query: 589  VCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVSPN 768
            VC+ G+VDEALRL+KQME  G  PNV+TYT+L+DGFCNA++V EA +++E MK+R V PN
Sbjct: 230  VCRTGVVDEALRLVKQMEGLGYSPNVYTYTILIDGFCNARRVDEAFRLVEMMKKRNVIPN 289

Query: 769  EATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEFLN 948
            EAT R+LIHG FRC+   +A++ L  + EK  +M +  C T+L+CLS N+MA EA  F+ 
Sbjct: 290  EATVRSLIHGVFRCVAPHEAFELLIMFLEKEPMMQKLACDTLLYCLSNNSMAREAALFMK 349

Query: 949  KMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLLEEK 1128
            K+  RG   D  TF + +AC +K L L + C +L+S+VE G K GF+TYL +++ L    
Sbjct: 350  KLAGRGYLPDNSTFNLTMACLIKGLDLDETCLILDSFVELGVKLGFNTYLALIQALYNIG 409

Query: 1129 HVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLITFN 1308
              VE  QYL +M  DG L++V SYN +ID F K  M+D A +   +M  +G  P L+TFN
Sbjct: 410  KFVEGDQYLDQMAKDGLLANVFSYNMVIDSFCKASMMDRARKTFREMYLRGIAPTLVTFN 469

Query: 1309 TLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEMVEW 1488
            T+ISG  K G+  KA+  LV LLE G  PD+ TFS+LIDGLC+AH IDDAF+CF+EM +W
Sbjct: 470  TIISGHCKIGEVHKAKEFLVMLLESGFDPDIFTFSSLIDGLCRAHMIDDAFDCFSEMFQW 529

Query: 1489 GISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEKFERA 1668
             ++PN +TYN LIRSLCA+G++ ++MKL ++M++ GI+ DIFS+N LI S CR++K E+A
Sbjct: 530  DVTPNDVTYNILIRSLCAIGDVARAMKLLRKMQATGINADIFSFNALIQSFCRMKKIEKA 589

Query: 1669 QHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYSLVADT 1848
            + LF++MLR G+ PD  TY +FIKALC++ R +     ++ ME     P+S + +LV ++
Sbjct: 590  EKLFNSMLRLGLDPDNYTYGAFIKALCESERFDEVIRMLKSMEAKGCIPDSYTCNLVLES 649

Query: 1849 LIRIGKPAEAEEFIRKCKRKGIRI 1920
            L++ G   EA +  ++C R+G ++
Sbjct: 650  LVQKGCLEEARDIAKRCNRRGTKL 673


>gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
          Length = 696

 Score =  657 bits (1695), Expect = 0.0
 Identities = 321/640 (50%), Positives = 447/640 (69%), Gaps = 8/640 (1%)
 Frame = +1

Query: 1    PLISSGITQQAASAK-PLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLL---- 165
            P  SS  T+ AA+   P D  R AS+L++ D    L++E     P L PR +V  L    
Sbjct: 30   PPRSSLSTKSAANPPDPADPARAASILAEDDWFPRLNAEFAAALPRLGPRFVVRALRAAA 89

Query: 166  --QNLQNPLFCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGY 339
              + L  PL C RLY+WA+ F A  A    VRR L   LWR+GP++L+  L+ EVR  G 
Sbjct: 90   EREGLGEPLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGC 149

Query: 340  RLTEDVLCMLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYF 519
             ++E+++C L  SWGRLGLA+YA+E+F Q+P LGLRP+T +YN++I A VRA ++D AY 
Sbjct: 150  EVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYL 209

Query: 520  KFQQMPSDNCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFC 699
            +FQQMP+D C PD FTYN+L+HGVC+RGIVDEA+RL++QME  G  PNVFTYTMLVDGFC
Sbjct: 210  RFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFC 269

Query: 700  NAKKVAEACQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQ 879
            NA +V EA ++L+ MK++ V+P+EAT+R L+HG FRC+   KAY+ LS +      +   
Sbjct: 270  NAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPS 329

Query: 880  VCSTMLHCLSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSY 1059
             C TML+CLS  +MA EA EF  +M  RG   D+  FG+V++CALK L +S +CE+L+S+
Sbjct: 330  ACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSF 389

Query: 1060 VERGGKPGFSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGML 1239
            ++ GG PGF  Y++V+K LL  K+  +A+ YL  M+L G LSSV SYN +IDCFVK G +
Sbjct: 390  IKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV 449

Query: 1240 DNAVEILEQMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSAL 1419
            D A EI+++M+++GF PNL+TFNTLISG+SK G+   A+ +L  L+EHG  PD++TF++L
Sbjct: 450  DKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSL 509

Query: 1420 IDGLCQAHRIDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGI 1599
            IDGLC  H++DDAF CF EM EWG+ PNA TYN L+ +LC+ G+++K++ L  +M+ +G+
Sbjct: 510  IDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGV 569

Query: 1600 DPDIFSYNPLILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKE 1779
             PD +S+N LILS CR+ K ++A+ +F+ M+RFGVVPD+ TY S IKALCD  R+  AKE
Sbjct: 570  TPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKE 629

Query: 1780 AMRVMELHSIS-PNSQSYSLVADTLIRIGKPAEAEEFIRK 1896
             +   E    S  N+QSY  +   L ++G+ +EA E + K
Sbjct: 630  ILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDK 669


>ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like [Brachypodium distachyon]
          Length = 684

 Score =  650 bits (1676), Expect = 0.0
 Identities = 314/629 (49%), Positives = 441/629 (70%), Gaps = 3/629 (0%)
 Frame = +1

Query: 43   KPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQ--NPLFCFRLYIWAA 216
            +P    R AS+L+++D    L+SE     P L PR +V +L+     +P  C RLY+WA+
Sbjct: 37   EPACPARAASILAEEDWFPRLNSEFAAAMPRLGPRFVVRVLRGAAPLDPHLCVRLYVWAS 96

Query: 217  NFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCMLFSSWGRLGL 396
             F A  A   SVRR L D LWR+GP +L+A L+ EVR  G  ++E++L  L +SWGRLGL
Sbjct: 97   RFGAHFARDASVRRALEDALWRRGPAVLSAALVAEVRGCGCEVSEELLRALIASWGRLGL 156

Query: 397  AKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNA 576
            A+YA+E+F Q+P LGLRP+T +YN++I A VRA ++D AY +FQQMP+D C PD FTYN 
Sbjct: 157  AQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNT 216

Query: 577  LIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRK 756
            L+HGVC+RGI+DEALRL++QME +G  PNVFTYTMLVDGFCNA +  +A  V +TMK++ 
Sbjct: 217  LVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKG 276

Query: 757  VSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEAT 936
            VSPNEA++R L+HG FRC+G  KAY  L+ +  +           ML+CLS N MA E  
Sbjct: 277  VSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVV 336

Query: 937  EFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGL 1116
            E   KM  RG   D   FG+VV+CA+K L LS +C +L+ +V++GG PGF  Y++V+K L
Sbjct: 337  EVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSL 396

Query: 1117 LEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNL 1296
            L  K   +A+ YL++M+LDG LS V SYN +IDCFVK G +D A EI+++MR +G  PNL
Sbjct: 397  LGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNL 456

Query: 1297 ITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNE 1476
            +TFNTLISG+SK G+   A+++L  L+EHGL PD++TF++LI+GLC  H++DDAF+CFNE
Sbjct: 457  VTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFDCFNE 516

Query: 1477 MVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEK 1656
            M EWG+ PNA TYN L+ +LC+ G+++K++ L  +M+ +GI PD +S+N  ILS CR++K
Sbjct: 517  MAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKK 576

Query: 1657 FERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYSL 1836
             ++A+++F+AMLR GVVPD  TY S IKALCD  RI+ AKE + +ME    S  +    L
Sbjct: 577  VDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLMESSGSSATTHHTHL 636

Query: 1837 -VADTLIRIGKPAEAEEFIRKCKRKGIRI 1920
             +   L + G+ ++A + + K  R+ +++
Sbjct: 637  PIVSALTKTGQFSKAGQLMNKYNRRNVQL 665


>ref|XP_004953323.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X1 [Setaria
            italica] gi|514715747|ref|XP_004953324.1| PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X2 [Setaria
            italica]
          Length = 671

 Score =  637 bits (1644), Expect = e-180
 Identities = 317/633 (50%), Positives = 442/633 (69%), Gaps = 4/633 (0%)
 Frame = +1

Query: 7    ISSGITQQAA-SAKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQ-N 180
            IS+   Q AA SA   D  R AS+L++ +    ++SE       + PR +V  LQ+    
Sbjct: 33   ISAESCQNAAESAAAADPARAASLLAEPNWFARINSEFAAALQQMGPRFVVRALQHAAAE 92

Query: 181  PLFCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVL 360
            PL C RLY+WA+ F    A   SVRR LGD LWR+GP++L+A L+ EV+  G  ++E++L
Sbjct: 93   PLLCVRLYVWASRFGQHFARDRSVRRALGDALWRRGPVVLSAALVAEVQGCGCVVSEELL 152

Query: 361  CMLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPS 540
            C L  SWGRLGLA YA+E+F Q+P LGL+P+T +YN++I A VRA ++D AY +FQQMP+
Sbjct: 153  CALVESWGRLGLAHYAHEVFVQMPRLGLQPSTMVYNAVIAASVRAGAVDAAYLRFQQMPA 212

Query: 541  DNCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAE 720
            D C PD FTYNAL+HGVC+RGIVDEALRL+KQME +G  PNVFTYTMLVDGFCNA +V +
Sbjct: 213  DGCRPDSFTYNALVHGVCRRGIVDEALRLVKQMEGAGIRPNVFTYTMLVDGFCNAGRVED 272

Query: 721  ACQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQ-VCSTML 897
            A  VLE MK++ V+  EAT+R LIHG FR +G+ KAY+ LS++ E    +  Q    T+L
Sbjct: 273  AVGVLEKMKEKGVATTEATYRTLIHGVFRSLGTDKAYRILSKWLESHPALHHQNAYHTLL 332

Query: 898  HCLSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGK 1077
            +CLS N M  EA E ++KM  RG      TFG+V++CALK L  S VCE+++ ++++GGK
Sbjct: 333  YCLSKNGMTKEAVELVDKMKNRGYPLGNTTFGIVISCALKRLEFSYVCELVDDFIKKGGK 392

Query: 1078 PGFSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEI 1257
             GF+ Y++++K LL  K + +A +YL +M+ DG  SSV SYN +IDC  K G ++ A+EI
Sbjct: 393  LGFNVYILIIKSLLSCKDISKAQKYLSQMVSDGLFSSVTSYNMVIDCLSKAGEVEMAMEI 452

Query: 1258 LEQMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQ 1437
            ++ M+  GF PNL+TFNTLISG+SK G+   A+++L  L+E G  PD++TF++LIDGLC 
Sbjct: 453  VKVMQESGFLPNLVTFNTLISGYSKLGNVHDAKAVLKMLMELGFMPDIITFTSLIDGLCH 512

Query: 1438 AHRIDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFS 1617
             H++DDAF CFNEM EWG+ PN  TYN LIR+ C+ G+++K++ L  +M+ +GI PD +S
Sbjct: 513  THQLDDAFACFNEMSEWGVKPNVQTYNVLIRAFCSEGHVNKAVDLLNKMKMDGICPDAYS 572

Query: 1618 YNPLILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVME 1797
            +N  ILS CR+ K ++A  LF+AML++GV PD+ TY + IKA+CD  R++ AKE +  ME
Sbjct: 573  FNAPILSFCRMRKIDKAHKLFTAMLKYGVAPDSYTYNTLIKAVCDERRVDEAKEILLAME 632

Query: 1798 LHS-ISPNSQSYSLVADTLIRIGKPAEAEEFIR 1893
              S I+    +Y  V   L ++G+ +EA  FIR
Sbjct: 633  SSSCIAAYQYTYWPVVGALTKMGRFSEAGVFIR 665


>tpg|DAA46984.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 674

 Score =  635 bits (1639), Expect = e-179
 Identities = 310/640 (48%), Positives = 435/640 (67%), Gaps = 2/640 (0%)
 Frame = +1

Query: 7    ISSGITQQAASAKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQN-P 183
            +S+   Q AA +   D  R  S+L+++D    ++SE       L PR +V  LQ+    P
Sbjct: 30   LSTKSGQAAAQSAAADPTRAVSLLAERDWFARINSEFAAPLRQLGPRFVVRALQHAAGEP 89

Query: 184  LFCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLC 363
            L C RLY+WA+ F    A   SVRR LGD L R+GP++L+A L+ +VR  G  ++E++LC
Sbjct: 90   LLCVRLYVWASRFGQHFARDRSVRRALGDALLRRGPVVLSAALVADVRSCGCEVSEELLC 149

Query: 364  MLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSD 543
             L  SWGRLGLA YA+E+F Q+P LGLRP+T +YN++I A VRA ++D AY +FQQMP+D
Sbjct: 150  ALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPAD 209

Query: 544  NCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEA 723
             C PD FTYN L+HGVC+RGIVDEALRL+KQME +G  PNV TYTMLVDGFCNA +V EA
Sbjct: 210  GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 269

Query: 724  CQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHC 903
              VLE MK++ VS  EAT+R+L+HG FRC+   +AY+ LS + E    +      T+L+C
Sbjct: 270  VCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYC 329

Query: 904  LSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPG 1083
            LS N+M  EA E   KM +RG    + TF +V+ CA+K L  S +CE+++ ++++GG  G
Sbjct: 330  LSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLG 389

Query: 1084 FSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILE 1263
            F  Y++++K  L  K + +A++Y  +M+ DG LSSVESYN +IDCF K G ++ A+E ++
Sbjct: 390  FDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIK 449

Query: 1264 QMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAH 1443
             M+  GF PNL+TFNTLI+G+ K G+   A++ L  ++EHGL PDV+TF++LIDGLC  H
Sbjct: 450  VMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTH 509

Query: 1444 RIDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYN 1623
            ++DDAFNCF+EM EWG+ PN  TYN LI  LC+ G++ K+++L  +M+ +GI PD +S+N
Sbjct: 510  QLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFN 569

Query: 1624 PLILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVME-L 1800
              ILS CR+ K E+AQ LF+ M R+GV PD+ TY + IKALCD  R++ AKE +  ME +
Sbjct: 570  APILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESI 629

Query: 1801 HSISPNSQSYSLVADTLIRIGKPAEAEEFIRKCKRKGIRI 1920
              I     +Y  V   L ++G+ +EA  F+ K  RK   +
Sbjct: 630  SCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLHRKNAHL 669


>ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
            gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa
            Japonica Group]
          Length = 682

 Score =  634 bits (1636), Expect = e-179
 Identities = 314/640 (49%), Positives = 436/640 (68%), Gaps = 8/640 (1%)
 Frame = +1

Query: 1    PLISSGITQQAASAK-PLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLL---- 165
            P  SS  T+ AA+   P D  R AS+L++ D    L++E     P L PR +V  L    
Sbjct: 30   PPRSSLSTKSAANPPDPADPARAASILAEDDWFPRLNAEFAAALPRLGPRFVVRALRAAA 89

Query: 166  --QNLQNPLFCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGY 339
              + L  PL C RLY+WA+ F A  A    VRR L   LWR+GP++L+  L+ EVR  G 
Sbjct: 90   EREGLGEPLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGRLVAEVRGCGC 149

Query: 340  RLTEDVLCMLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYF 519
             ++E+++C L  SWGRLGLA+YA+E+F Q+P LGLRP+T +Y               AY 
Sbjct: 150  EVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYT--------------AYL 195

Query: 520  KFQQMPSDNCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFC 699
            +FQQMP+D C PD FTYN+L+HGVC+RGIVDEA+RL++QME  G  PNVFTYTMLVDGFC
Sbjct: 196  RFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFC 255

Query: 700  NAKKVAEACQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQ 879
            NA +V EA ++L+ MK++ V+P+EAT+R L+HG FRC+   KAY+ LS +      +   
Sbjct: 256  NAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPS 315

Query: 880  VCSTMLHCLSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSY 1059
             C TML+CLS  +MA EA EF  +M  RG   D+  FG+V++CALK L +S +CE+L+S+
Sbjct: 316  ACHTMLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSF 375

Query: 1060 VERGGKPGFSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGML 1239
            ++ GG PGF  Y++V+K LL  K+  +A+ YL  M+L G LSSV SYN +IDCFVK G +
Sbjct: 376  IKNGGNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAV 435

Query: 1240 DNAVEILEQMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSAL 1419
            D A EI+++M+++GF PNL+TFNTLISG+SK G+   A+ +L  L+EHG  PD++TF++L
Sbjct: 436  DKAEEIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSL 495

Query: 1420 IDGLCQAHRIDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGI 1599
            IDGLC  H++DDAF CF EM EWG+ PNA TYN L+ +LC+ G+++K++ L  +M+ +G+
Sbjct: 496  IDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGV 555

Query: 1600 DPDIFSYNPLILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKE 1779
             PD +S+N LILS CR+ K ++A+ +F+ M+RFGVVPD+ TY S IKALCD  R+  AKE
Sbjct: 556  TPDAYSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKE 615

Query: 1780 AMRVMELHSIS-PNSQSYSLVADTLIRIGKPAEAEEFIRK 1896
             +   E    S  N+QSY  +   L ++G+ +EA E + K
Sbjct: 616  ILFARERSGCSTSNNQSYWPIVAALAKMGQFSEAGELMDK 655


>ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName:
            Full=Putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial; AltName: Full=Protein
            PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
            gi|7670019|dbj|BAA94973.1| salt-inducible protein-like
            [Arabidopsis thaliana] gi|332642359|gb|AEE75880.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 659

 Score =  627 bits (1618), Expect = e-177
 Identities = 299/619 (48%), Positives = 424/619 (68%)
 Frame = +1

Query: 1    PLISSGITQQAASAKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQN 180
            P +S  +        PL+   ++ V+ +KD  L L+ E   +   L+ R ++S+LQN  N
Sbjct: 29   PKLSKTLNSSGKPTNPLNQRYISQVIERKDWFLILNQEFTTHRIGLNTRFVISVLQNQDN 88

Query: 181  PLFCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVL 360
            PL   R Y+W +NFD   A   S++ VLG+ L+RKGP++L+ +L+KE+R SGYR++++++
Sbjct: 89   PLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELM 148

Query: 361  CMLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPS 540
            C+L  SWGRLGLAKY N++F Q+  LG++P+TRLYN++I+ALV++NSLDLAY KFQQM S
Sbjct: 149  CVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRS 208

Query: 541  DNCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAE 720
            D C PDRFTYN LIHGVCK+G+VDEA+RL+KQME  G  PNVFTYT+L+DGF  A +V E
Sbjct: 209  DGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDE 268

Query: 721  ACQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLH 900
            A + LE M+ RK++PNEAT R  +HG FRC+   KA++ L  + EK + +       +L+
Sbjct: 269  ALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLY 328

Query: 901  CLSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKP 1080
            CLS N+MA E  +FL K+GERG   D+ TF   ++C LK   L + C + + +V RG KP
Sbjct: 329  CLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKP 388

Query: 1081 GFSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEIL 1260
            GF+ YL++V+ LL  +   E  +YL++M +DG LSSV SYN +IDC  K   ++NA   L
Sbjct: 389  GFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFL 448

Query: 1261 EQMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQA 1440
             +M+++G  PNL+TFNT +SG+S  GD  K   +L KLL HG KPDV+TFS +I+ LC+A
Sbjct: 449  TEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRA 508

Query: 1441 HRIDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSY 1620
              I DAF+CF EM+EWGI PN ITYN LIRS C+ G+ D+S+KLF +M+  G+ PD+++Y
Sbjct: 509  KEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAY 568

Query: 1621 NPLILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMEL 1800
            N  I S C++ K ++A+ L   MLR G+ PD  TY++ IKAL ++GR   A+E    +E 
Sbjct: 569  NATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628

Query: 1801 HSISPNSQSYSLVADTLIR 1857
            H   P+S +  LV +  +R
Sbjct: 629  HGCVPDSYTKRLVEELDLR 647


>tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
          Length = 683

 Score =  627 bits (1616), Expect = e-176
 Identities = 304/622 (48%), Positives = 426/622 (68%), Gaps = 2/622 (0%)
 Frame = +1

Query: 7    ISSGITQQAASAKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQN-P 183
            +S+   Q AA +   D  R  S+L+++D    ++SE       L PR +V  LQ+    P
Sbjct: 30   LSTKSGQAAAQSAAADPTRAVSLLAERDWFARINSEFAAPLRQLGPRFVVRALQHAAGEP 89

Query: 184  LFCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLC 363
            L C RLY+WA+ F    A   SVRR LGD L R+GP++L+A L+ +VR  G  ++E++LC
Sbjct: 90   LLCVRLYVWASRFGQHFARDRSVRRALGDALLRRGPVVLSAALVADVRSCGCEVSEELLC 149

Query: 364  MLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSD 543
             L  SWGRLGLA YA+E+F Q+P LGLRP+T +YN++I A VRA ++D AY +FQQMP+D
Sbjct: 150  ALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPAD 209

Query: 544  NCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEA 723
             C PD FTYN L+HGVC+RGIVDEALRL+KQME +G  PNV TYTMLVDGFCNA +V EA
Sbjct: 210  GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 269

Query: 724  CQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHC 903
              VLE MK++ VS  EAT+R+L+HG FRC+   +AY+ LS + E    +      T+L+C
Sbjct: 270  VCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIAYHTLLYC 329

Query: 904  LSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPG 1083
            LS N+M  EA E   KM +RG    + TF +V+ CA+K L  S +CE+++ ++++GG  G
Sbjct: 330  LSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLG 389

Query: 1084 FSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILE 1263
            F  Y++++K  L  K + +A++Y  +M+ DG LSSVESYN +IDCF K G ++ A+E ++
Sbjct: 390  FDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALETIK 449

Query: 1264 QMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAH 1443
             M+  GF PNL+TFNTLI+G+ K G+   A++ L  ++EHGL PDV+TF++LIDGLC  H
Sbjct: 450  VMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDGLCHTH 509

Query: 1444 RIDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYN 1623
            ++DDAFNCF+EM EWG+ PN  TYN LI  LC+ G++ K+++L  +M+ +GI PD +S+N
Sbjct: 510  QLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPDAYSFN 569

Query: 1624 PLILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVME-L 1800
              ILS CR+ K E+AQ LF+ M R+GV PD+ TY + IKALCD  R++ AKE +  ME +
Sbjct: 570  APILSFCRMRKIEKAQKLFNDMSRYGVSPDSYTYNALIKALCDERRVDEAKEIILAMESI 629

Query: 1801 HSISPNSQSYSLVADTLIRIGK 1866
              I     +Y  V   L ++G+
Sbjct: 630  SCIGTKQHTYWPVVGALTKMGR 651



 Score = 85.5 bits (210), Expect = 1e-13
 Identities = 84/419 (20%), Positives = 155/419 (36%), Gaps = 70/419 (16%)
 Frame = +1

Query: 868  MDEQVCSTMLHCLSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEM 1047
            + E++   ++       +A  A E   ++   G    T  +  V+A ++++  +      
Sbjct: 143  VSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVDAAYLR 202

Query: 1048 LNSYVERGGKPGFSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVK 1227
                   G +P   TY  +V G+     V EA + +++M   G   +V +Y  L+D F  
Sbjct: 203  FQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCN 262

Query: 1228 LGMLDNAVEILEQMRNQGFHPNLITFNTLISG---------------------------- 1323
               ++ AV +LE+M+ +G      T+ +L+ G                            
Sbjct: 263  ASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIESDPTLHSIA 322

Query: 1324 -------FSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEMV 1482
                    SK     +A  +  K+ + G      TFS +I    +     D     ++ +
Sbjct: 323  YHTLLYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFI 382

Query: 1483 EWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEKFE 1662
            + G +     Y  +I+S     +I K+ K F +M S+G+   + SYN +I    +  + E
Sbjct: 383  KKGGNLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVE 442

Query: 1663 RAQHLFSAM-----------------------------------LRFGVVPDANTYASFI 1737
            RA      M                                   +  G++PD  T+ S I
Sbjct: 443  RALETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLI 502

Query: 1738 KALCDAGRIEGAKEAMRVMELHSISPNSQSYSLVADTLIRIGKPAEAEEFIRKCKRKGI 1914
              LC   +++ A      M    + PN Q+Y+++   L   G  ++A E + K K  GI
Sbjct: 503  DGLCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGI 561


>ref|XP_004299932.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 674

 Score =  624 bits (1609), Expect = e-176
 Identities = 304/622 (48%), Positives = 431/622 (69%), Gaps = 2/622 (0%)
 Frame = +1

Query: 49   LDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQNPLFCFRLYIWAANFDA 228
            +DH+ +A VLS+KD  L LD EL      L+P+ + S+LQN +NPL   +  IW +N + 
Sbjct: 51   IDHLYIARVLSRKDWFLLLDHELNARRILLTPQSVASVLQNQENPLHPLKFSIWFSNVEP 110

Query: 229  KLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCMLFSSWGRLGLAKYA 408
                + SVR VL + L+RKGP +L+ + +K+V+ SG ++TED+LC+L  SWGRLGLAKY 
Sbjct: 111  LFLKNQSVRGVLANTLFRKGPAVLSVEFLKDVKNSGLKVTEDLLCILIGSWGRLGLAKYC 170

Query: 409  NEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALIHG 588
             E+FGQ+  LGL  +TRLYN++I ALV++NSLDLAY KFQQMP+DNC PDRFTYN LIHG
Sbjct: 171  AEVFGQISFLGLTLSTRLYNAVINALVKSNSLDLAYLKFQQMPADNCHPDRFTYNILIHG 230

Query: 589  VCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVSPN 768
            VCK GIVDEA+RL+KQME  G  PNV TYT LVDGFC +K+V EA +V++ M+ + V+PN
Sbjct: 231  VCKIGIVDEAVRLVKQMEGLGYLPNVHTYTNLVDGFCKSKRVDEAFRVIKLMRYKNVTPN 290

Query: 769  EATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEFLN 948
            EAT R+L+HG F C+  GKA++ L  + E  +L+ +  C T+L+CL+ N+M+ E   FL 
Sbjct: 291  EATVRSLVHGVFHCMDPGKAFELLLSFVEGESLLFKVACDTILYCLANNHMSREIALFLK 350

Query: 949  KMGERGKCADTLTFGVVVACALKSLRLSQ--VCEMLNSYVERGGKPGFSTYLIVVKGLLE 1122
            K G +G   D+ TF + + C  K L  +Q  V E+  +Y++ GGKPGF TYL++++ + +
Sbjct: 351  KFGAKGYLPDSSTFNITMVCLTKELAHAQNEVHELFENYIQGGGKPGFGTYLVLIEAMYK 410

Query: 1123 EKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLIT 1302
              ++ E +Q   +++ D  LSSV SYN +I+CF K  +LD A      M + G  P L+T
Sbjct: 411  SGNIDEGNQIFEQLVKDELLSSVHSYNMVINCFCKAQILDRASRAFGDMPHNGIPPTLVT 470

Query: 1303 FNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEMV 1482
            FNTL++G+ K G+ SKA  +L+ LLEHG KPD+ TFS +IDGLC+ ++IDDAF+CF+EMV
Sbjct: 471  FNTLLAGYCKAGEVSKAHELLIMLLEHGFKPDIFTFSTIIDGLCRVNQIDDAFDCFSEMV 530

Query: 1483 EWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEKFE 1662
             WGI+PN ITYN L+RSLC +G+I ++ +L + M+ +GI PD +S++ LI S CR+ K E
Sbjct: 531  RWGITPNVITYNILLRSLCFIGDIARAERLMENMQVDGIKPDSYSFSHLIQSFCRMNKVE 590

Query: 1663 RAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYSLVA 1842
            +A+  F  ML+ G+ PD  TY+ FIKALCD G+++ AKE    ME +   PNS   S++ 
Sbjct: 591  KAEEHFLVMLKSGLNPDNYTYSVFIKALCDLGKLDVAKEIFLSMEAYDCLPNSSLCSIML 650

Query: 1843 DTLIRIGKPAEAEEFIRKCKRK 1908
            D+LI+  +  EA   ++   R+
Sbjct: 651  DSLIQHNRFEEACRMVKSFVRR 672



 Score = 62.4 bits (150), Expect = 1e-06
 Identities = 30/117 (25%), Positives = 59/117 (50%)
 Frame = +1

Query: 406 ANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALIH 585
           A  +   + V G++P +  ++ +I++  R N ++ A   F  M     +PD +TY+  I 
Sbjct: 557 AERLMENMQVDGIKPDSYSFSHLIQSFCRMNKVEKAEEHFLVMLKSGLNPDNYTYSVFIK 616

Query: 586 GVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRK 756
            +C  G +D A  +   ME   C PN    ++++D      +  EAC+++++  +RK
Sbjct: 617 ALCDLGKLDVAKEIFLSMEAYDCLPNSSLCSIMLDSLIQHNRFEEACRMVKSFVRRK 673


>gb|EXB55746.1| hypothetical protein L484_007742 [Morus notabilis]
          Length = 882

 Score =  622 bits (1605), Expect = e-175
 Identities = 293/564 (51%), Positives = 411/564 (72%)
 Frame = +1

Query: 49   LDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQNPLFCFRLYIWAANFDA 228
            +DH  +  VLS  D ++ L  EL+    SL+PR +VS+LQN +NPL   R Y+W ++ D 
Sbjct: 70   VDHRYITRVLSSHDWVVLLTHELKSKRVSLNPRFVVSVLQNQENPLLPLRFYLWVSSVDP 129

Query: 229  KLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCMLFSSWGRLGLAKYA 408
             L  + SVRRVLG+  +R GP++L+ DL+KE++ SG+ ++ED+LC+L  SWGRLGLAKY 
Sbjct: 130  SLTRNQSVRRVLGNAFYRNGPVVLSVDLVKEIKKSGFSVSEDLLCVLIGSWGRLGLAKYC 189

Query: 409  NEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALIHG 588
             E+FGQ+  LGL P+TRLYN++I+ALV++NSLDLAY KFQQM SDNC PDRFTYN LIHG
Sbjct: 190  VEVFGQISFLGLSPSTRLYNAVIDALVKSNSLDLAYLKFQQMTSDNCVPDRFTYNILIHG 249

Query: 589  VCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVSPN 768
            VCK G+VDEALRL+KQME  G  PNVFTYT+L+DGFCN+K+V EA  VLETMK+R V PN
Sbjct: 250  VCKVGVVDEALRLVKQMESVGYCPNVFTYTILIDGFCNSKRVEEAFGVLETMKERNVRPN 309

Query: 769  EATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEFLN 948
            EAT R+L+HG FRC+   KA + L R+ EK +L     C T+L CL+ N+MA EA+EFL 
Sbjct: 310  EATIRSLVHGVFRCVSPRKAVELLFRFVEKESLYSRSACDTILFCLANNSMAREASEFLR 369

Query: 949  KMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLLEEK 1128
            + G +G   D+ TF + + C +K L  ++  E+  ++VERG KPGFSTYL +V+ + E  
Sbjct: 370  EAGLKGYLPDSSTFNMAITCLIKDLDANETHEIFENFVERGVKPGFSTYLALVEAMYEGG 429

Query: 1129 HVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLITFN 1308
             V    ++L +MI DG +S+V SYN +IDCF +  M+  A +  E+MR +G  PNL+T N
Sbjct: 430  RVEVGDEFLDEMIKDGLVSNVYSYNMVIDCFCRAQMIGRAFQAFEEMRLRGIAPNLVTLN 489

Query: 1309 TLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEMVEW 1488
            TLI+G+ K G+ S+AR +LV +LE+G KPD+ TFS +IDGLC+  +I++AF C +EM+EW
Sbjct: 490  TLINGYCKVGELSRARELLVMVLENGFKPDIFTFSPIIDGLCRLKQIEEAFACLSEMLEW 549

Query: 1489 GISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEKFERA 1668
            G++PN+  YNTLIR+LC +G+  +SM+L  +M+++GI PD  S+N L+ + C++ K E+A
Sbjct: 550  GVAPNSCVYNTLIRALCVIGDTGRSMRLLNKMQADGIKPDASSFNVLVQTFCKMNKAEKA 609

Query: 1669 QHLFSAMLRFGVVPDANTYASFIK 1740
            ++LF +ML+  +VPD++ Y   I+
Sbjct: 610  ENLFRSMLKLDLVPDSSVYNVLIR 633



 Score =  146 bits (369), Expect = 4e-32
 Identities = 102/441 (23%), Positives = 197/441 (44%)
 Frame = +1

Query: 595  KRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVSPNEA 774
            + G V  ++ L+K+++ SG   +     +L+  +          +V   +    +SP+  
Sbjct: 147  RNGPVVLSVDLVKEIKKSGFSVSEDLLCVLIGSWGRLGLAKYCVEVFGQISFLGLSPSTR 206

Query: 775  TFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEFLNKM 954
             + A+I    +      AY    +      + D    + ++H +    +  EA   + +M
Sbjct: 207  LYNAVIDALVKSNSLDLAYLKFQQMTSDNCVPDRFTYNILIHGVCKVGVVDEALRLVKQM 266

Query: 955  GERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLLEEKHV 1134
               G C +  T+ +++     S R+ +   +L +  ER  +P  +T   +V G+      
Sbjct: 267  ESVGYCPNVFTYTILIDGFCNSKRVEEAFGVLETMKERNVRPNEATIRSLVHGVFRCVSP 326

Query: 1135 VEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLITFNTL 1314
             +A + L + +    L S  + +T++ C     M   A E L +   +G+ P+  TFN  
Sbjct: 327  RKAVELLFRFVEKESLYSRSACDTILFCLANNSMAREASEFLREAGLKGYLPDSSTFNMA 386

Query: 1315 ISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEMVEWGI 1494
            I+   K  D+++   I    +E G+KP   T+ AL++ + +  R++      +EM++ G+
Sbjct: 387  ITCLIKDLDANETHEIFENFVERGVKPGFSTYLALVEAMYEGGRVEVGDEFLDEMIKDGL 446

Query: 1495 SPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEKFERAQH 1674
              N  +YN +I   C    I ++ + F+ MR  GI P++ + N LI   C++ +  RA+ 
Sbjct: 447  VSNVYSYNMVIDCFCRAQMIGRAFQAFEEMRLRGIAPNLVTLNTLINGYCKVGELSRARE 506

Query: 1675 LFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYSLVADTLI 1854
            L   +L  G  PD  T++  I  LC   +IE A   +  M    ++PNS  Y+ +   L 
Sbjct: 507  LLVMVLENGFKPDIFTFSPIIDGLCRLKQIEEAFACLSEMLEWGVAPNSCVYNTLIRALC 566

Query: 1855 RIGKPAEAEEFIRKCKRKGIR 1917
             IG    +   + K +  GI+
Sbjct: 567  VIGDTGRSMRLLNKMQADGIK 587


>ref|XP_006297164.1| hypothetical protein CARUB_v10013169mg [Capsella rubella]
            gi|482565873|gb|EOA30062.1| hypothetical protein
            CARUB_v10013169mg [Capsella rubella]
          Length = 654

 Score =  619 bits (1597), Expect = e-174
 Identities = 301/612 (49%), Positives = 421/612 (68%), Gaps = 1/612 (0%)
 Frame = +1

Query: 43   KPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQNPLFCFRLYIWAANF 222
            KPLD   ++ V+ +KD  L L+ E   +   L+ R ++S+LQN  NPL   R Y+W +NF
Sbjct: 38   KPLDQRYISQVIERKDWFLLLNQEFTIHRIGLNARFVISVLQNQDNPLHSLRFYLWVSNF 97

Query: 223  DAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCMLFSSWGRLGLAK 402
            D   A   S++ VLG+ L+RKGP++L+ +L+KE+R SGYR+T++++C+L  SWG+LGLAK
Sbjct: 98   DPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRESGYRITDELMCVLIGSWGKLGLAK 157

Query: 403  YANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALI 582
            Y+N++F Q+  LG++P+TRLYN++I+ALV++NSLDLAY KFQQMPSD+C PDRFTYN LI
Sbjct: 158  YSNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMPSDDCKPDRFTYNILI 217

Query: 583  HGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVS 762
            HGVCK+G+VDEA+RL+KQME  G  PNVFTYT+L+DGF  A +V +A + LETM++R ++
Sbjct: 218  HGVCKKGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRVEDALKQLETMRERNLN 277

Query: 763  PNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEF 942
            PNEAT R L+HG FRC+   +A++ L  + EK + +      T+L CLS N+MA E   F
Sbjct: 278  PNEATIRTLVHGIFRCLPPCEAFEVLLGFMEKNSNLHRVAYDTVLFCLSNNSMAKETALF 337

Query: 943  LNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLLE 1122
            L K GER    D  TF   + C LK   L + C + + +V RG KPGF+ YL+VV+ LL 
Sbjct: 338  LRKTGERDYIMDNSTFNGAMNCLLKGHDLVETCGIFDGFVSRGVKPGFNGYLVVVQALLN 397

Query: 1123 EKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLIT 1302
                 E  +YL++M  DG LSSV +YN +IDC  K   ++ A   L +M+++G  PNL+T
Sbjct: 398  AHRFSEGDRYLKQMGDDGLLSSVYTYNAVIDCLCKARRIERAAMFLTEMQDKGISPNLVT 457

Query: 1303 FNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEMV 1482
            FNT +SG+S  GD  K   IL KLLEHG KPDV+TFS +I+ LC+A  I DAF+CF EM+
Sbjct: 458  FNTFLSGYSVRGDVKKVHGILEKLLEHGCKPDVITFSLIINCLCRAKEIKDAFDCFKEML 517

Query: 1483 EWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEKFE 1662
            EWGI PN ITYN LIRS C+ G+  +S+KLF +M+  G+ PD+++ N +I S CR+ K +
Sbjct: 518  EWGIEPNEITYNILIRSSCSSGDTGRSVKLFAKMKENGLSPDLYACNAIIQSFCRMRKIK 577

Query: 1663 RAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYSLVA 1842
            +A+ L   MLR G+ PD  TY++ IKAL ++GR   A E    ME +   P+S +  L+ 
Sbjct: 578  KAEDLLETMLRIGLKPDNFTYSTLIKALTESGRESEASEMFSSMERYGCVPDSYTKRLIE 637

Query: 1843 DTLIRI-GKPAE 1875
            +  +R+ G P E
Sbjct: 638  ELDLRLSGLPRE 649


>ref|XP_006406795.1| hypothetical protein EUTSA_v10022362mg [Eutrema salsugineum]
            gi|557107941|gb|ESQ48248.1| hypothetical protein
            EUTSA_v10022362mg [Eutrema salsugineum]
          Length = 644

 Score =  618 bits (1594), Expect = e-174
 Identities = 297/619 (47%), Positives = 422/619 (68%)
 Frame = +1

Query: 1    PLISSGITQQAASAKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQN 180
            PL+ SG         P+D   ++ ++ +KD  L L  E   +   L+ R ++S+LQN +N
Sbjct: 29   PLLPSG-----KPTNPIDRRYISQIIGRKDWFLVLKQEFSAHRIGLNHRFVISVLQNQEN 83

Query: 181  PLFCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVL 360
            PL   R Y+W +N D   A   S++ VLG+  +RKGP++L+ +L+KE+R SGYR+T++++
Sbjct: 84   PLHSLRFYLWVSNTDPVYARDQSLKSVLGNAFFRKGPLLLSMELLKEIRDSGYRITDELM 143

Query: 361  CMLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPS 540
            C+L  SWGRLGLAKY N++F Q+  LG++P+TRLYN++I+ALV++NSLDLAY KFQQM S
Sbjct: 144  CVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRS 203

Query: 541  DNCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAE 720
            D+C PDRFTYN LIHGVCK+G+VDEA+RL+KQME  G  PNVFT+T+L+DGF  A +V E
Sbjct: 204  DDCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEREGNRPNVFTFTILIDGFLIAGRVEE 263

Query: 721  ACQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLH 900
            A + LETM+ RK++PNEAT R L+HG FRC+   +A++ L  + EK + +      T+L 
Sbjct: 264  ALKQLETMRSRKLNPNEATIRTLVHGIFRCLQPCEAFEVLLEFIEKNSNLQRVAYDTVLC 323

Query: 901  CLSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKP 1080
            CLS+N+MA E   FL K GERG   D+ TF   + C LK   L+++C + + ++ RG KP
Sbjct: 324  CLSSNSMAKETALFLRKTGERGYVPDSSTFNASMICLLKGYDLTEMCGIFDEFISRGVKP 383

Query: 1081 GFSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEIL 1260
            GF+ YL+VVK LL  +   E+ +YL++M +D  LSS   YN +IDC  K    D A   L
Sbjct: 384  GFNGYLVVVKALLSAQRFSESDRYLKQMGVDRLLSSAYDYNAVIDCLCKARRTDRAAMFL 443

Query: 1261 EQMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQA 1440
             +M+++G  P+L+TFNT +SG+S  GD  K   +L KLL+HG KPDV+TFS++I+ LC+A
Sbjct: 444  TEMQDRGISPSLVTFNTFLSGYSANGDVKKVHEVLEKLLDHGCKPDVITFSSVINCLCRA 503

Query: 1441 HRIDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSY 1620
              I DAF+CF EM+EWGI PN ITYN LIR  C+ G+  +S+KLF +M+  G+ PD+++Y
Sbjct: 504  KEIKDAFDCFKEMLEWGIEPNEITYNILIRFSCSTGDTGRSVKLFAKMKENGLSPDVYAY 563

Query: 1621 NPLILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMEL 1800
            N +I S CR+ K + A+ L   MLR G+ PD  TY++ IKAL ++GR   A+E    ME 
Sbjct: 564  NAVIQSFCRMRKVKNAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMER 623

Query: 1801 HSISPNSQSYSLVADTLIR 1857
            H   P+S +  LV +  +R
Sbjct: 624  HGCVPDSYTKRLVKELDLR 642


>ref|XP_004509597.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X1 [Cicer
            arietinum] gi|502154141|ref|XP_004509598.1| PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X2 [Cicer
            arietinum] gi|502154144|ref|XP_004509599.1| PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X3 [Cicer
            arietinum]
          Length = 674

 Score =  617 bits (1592), Expect = e-174
 Identities = 300/629 (47%), Positives = 437/629 (69%), Gaps = 3/629 (0%)
 Frame = +1

Query: 43   KPLDHVRLASVLSQ--KDPLLALDSELRRYEPSLSPRIIVSLLQNLQNPLFCFRLYIWAA 216
            +P++H  L+ +LS+   D LL L+   R  +  L+P  + ++  NL NPL   + Y W +
Sbjct: 40   QPINHSHLSQLLSKPNSDWLLLLNHHFRTNKLLLTPPSLSTIFHNLHNPLHSIKFYTWLS 99

Query: 217  NFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCMLFSSWGRLGL 396
              +  LA++PS++R+L + L+  GP++L+  L+ ++  SG+R+++++LC+L SSWG+LGL
Sbjct: 100  TTNPSLANNPSLQRILSNTLYTNGPVLLSPQLLNDLHKSGFRVSQNLLCILMSSWGKLGL 159

Query: 397  AKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNA 576
            AKY  ++F Q+ +LG+ PTTRLYNS+++ALV++NS+DLAY KFQQM  D+C PDR TYN 
Sbjct: 160  AKYCVDVFSQISILGISPTTRLYNSLMDALVKSNSVDLAYHKFQQMIGDHCFPDRITYNV 219

Query: 577  LIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRK 756
            LIHGVCK G+VDEA+RL++QM+  G  PNVFTYT+L+DGFCNAK+V EA  VLE MK+ K
Sbjct: 220  LIHGVCKIGVVDEAIRLIRQMKGKGIFPNVFTYTILIDGFCNAKRVDEAFGVLEKMKESK 279

Query: 757  VSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQV-CSTMLHCLSTNNMAIEA 933
            VS N+AT R L+HG FRC+ + KA++ LS + +K ++   +V C T+L+CL++N+MA E 
Sbjct: 280  VSANDATVRTLVHGVFRCVDASKAFELLSEFLDKDDVFFGKVACDTLLYCLASNSMAKEI 339

Query: 934  TEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKG 1113
              F+ K  +RG   D+  F VV+AC +K + + + CE+     ++G KP   TYL +V+ 
Sbjct: 340  IVFMRKALDRGYVPDSSIFNVVMACLVKGVEVREACEVFEILRKQGVKPSIGTYLALVEA 399

Query: 1114 LLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPN 1293
                    +  Q   KMI DG +S+V SYN LI+CF +  ++D A +I  +M+ +GF PN
Sbjct: 400  SYNNDRREDGDQISDKMISDGLISNVISYNMLINCFCRSNLMDKASDIFREMQLRGFAPN 459

Query: 1294 LITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFN 1473
            L+TFNTLI+G  K G   KAR +L  LLE+ LKPD+ TFS++IDGLC+  R ++AF CFN
Sbjct: 460  LVTFNTLINGHCKDGAIIKARELLETLLENELKPDIFTFSSMIDGLCRIKRTEEAFECFN 519

Query: 1474 EMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIE 1653
            EM+EWGI+PNAI YN LIRSLC +G   +S+KLF+RM+ EGI PD +SYN LI   CR+ 
Sbjct: 520  EMIEWGINPNAIIYNILIRSLCGIGETVRSLKLFRRMQEEGISPDTYSYNALIQIFCRMN 579

Query: 1654 KFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYS 1833
            K E+AQ LF +ML+ G+ PD  TY++FI+AL  +GR++ AK+    ME +  SP+S   +
Sbjct: 580  KVEKAQKLFESMLKSGLNPDNYTYSAFIEALSQSGRLDDAKKIFYSMEANGCSPDSYLCN 639

Query: 1834 LVADTLIRIGKPAEAEEFIRKCKRKGIRI 1920
            L+  TLIR     EA + + +C++KGI +
Sbjct: 640  LIVKTLIRQDHVEEARKVVERCRQKGISL 668



 Score =  108 bits (271), Expect = 9e-21
 Identities = 81/357 (22%), Positives = 144/357 (40%)
 Frame = +1

Query: 439  GLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALIHGVCKRGIVDEA 618
            G  P + ++N ++  LV+   +  A   F+ +      P   TY AL+         ++ 
Sbjct: 350  GYVPDSSIFNVVMACLVKGVEVREACEVFEILRKQGVKPSIGTYLALVEASYNNDRREDG 409

Query: 619  LRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVSPNEATFRALIHG 798
             ++  +M   G   NV +Y ML++ FC +  + +A  +   M+ R  +PN  TF  LI+G
Sbjct: 410  DQISDKMISDGLISNVISYNMLINCFCRSNLMDKASDIFREMQLRGFAPNLVTFNTLING 469

Query: 799  TFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEFLNKMGERGKCAD 978
                                             HC   +   I+A E L  + E     D
Sbjct: 470  ---------------------------------HC--KDGAIIKARELLETLLENELKPD 494

Query: 979  TLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLLEEKHVVEASQYLR 1158
              TF  ++    +  R  +  E  N  +E G  P    Y I+++ L      V + +  R
Sbjct: 495  IFTFSSMIDGLCRIKRTEEAFECFNEMIEWGINPNAIIYNILIRSLCGIGETVRSLKLFR 554

Query: 1159 KMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLITFNTLISGFSKTG 1338
            +M  +G      SYN LI  F ++  ++ A ++ E M   G +P+  T++  I   S++G
Sbjct: 555  RMQEEGISPDTYSYNALIQIFCRMNKVEKAQKLFESMLKSGLNPDNYTYSAFIEALSQSG 614

Query: 1339 DSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEMVEWGISPNAI 1509
                A+ I   +  +G  PD    + ++  L +   +++A        + GIS N I
Sbjct: 615  RLDDAKKIFYSMEANGCSPDSYLCNLIVKTLIRQDHVEEARKVVERCRQKGISLNCI 671



 Score =  100 bits (248), Expect = 4e-18
 Identities = 64/300 (21%), Positives = 145/300 (48%), Gaps = 2/300 (0%)
 Frame = +1

Query: 406  ANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALIH 585
            A E+F  L   G++P+   Y +++EA    +  +       +M SD    +  +YN LI+
Sbjct: 374  ACEVFEILRKQGVKPSIGTYLALVEASYNNDRREDGDQISDKMISDGLISNVISYNMLIN 433

Query: 586  GVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVSP 765
              C+  ++D+A  + ++M+  G  PN+ T+  L++G C    + +A ++LET+ + ++ P
Sbjct: 434  CFCRSNLMDKASDIFREMQLRGFAPNLVTFNTLINGHCKDGAIIKARELLETLLENELKP 493

Query: 766  NEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEFL 945
            +  TF ++I G  R   + +A++  +   E     +  + + ++  L      + + +  
Sbjct: 494  DIFTFSSMIDGLCRIKRTEEAFECFNEMIEWGINPNAIIYNILIRSLCGIGETVRSLKLF 553

Query: 946  NKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLLEE 1125
             +M E G   DT ++  ++    +  ++ +  ++  S ++ G  P   TY   ++ L + 
Sbjct: 554  RRMQEEGISPDTYSYNALIQIFCRMNKVEKAQKLFESMLKSGLNPDNYTYSAFIEALSQS 613

Query: 1126 KHVVEASQYLRKMILDGYLSSVESY--NTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLI 1299
              + +A +    M  +G   S +SY  N ++   ++   ++ A +++E+ R +G   N I
Sbjct: 614  GRLDDAKKIFYSMEANG--CSPDSYLCNLIVKTLIRQDHVEEARKVVERCRQKGISLNCI 671


>ref|XP_006858848.1| hypothetical protein AMTR_s00066p00184190 [Amborella trichopoda]
            gi|548862959|gb|ERN20315.1| hypothetical protein
            AMTR_s00066p00184190 [Amborella trichopoda]
          Length = 721

 Score =  616 bits (1588), Expect = e-173
 Identities = 301/623 (48%), Positives = 427/623 (68%), Gaps = 1/623 (0%)
 Frame = +1

Query: 46   PLDHVRLASVLSQKDPLLALDSELRRYEPS-LSPRIIVSLLQNLQNPLFCFRLYIWAANF 222
            P+D V +  +LS+KD    L++     + S L+ R +   L++ ++P   F+ YIW +  
Sbjct: 93   PVDAVSVIDILSRKDWFTQLNNVFAHRDSSILTARFVSRALRSQEDPALAFKFYIWVSQL 152

Query: 223  DAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCMLFSSWGRLGLAK 402
            D       S +R+L D+L+ +GP++L+A L++E+R+S  R+TED +C L +SWGRLGLAK
Sbjct: 153  DGFQLKCTSAQRILDDILFTRGPLVLSAGLVRELRISECRITEDAICALINSWGRLGLAK 212

Query: 403  YANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALI 582
            YA+E+F ++  LG + TTR+YN++I+ALV++N LDLAYFKFQQMP++ CSPDRFTYN LI
Sbjct: 213  YASEVFEKISFLGFKATTRVYNTVIDALVKSNCLDLAYFKFQQMPAEGCSPDRFTYNHLI 272

Query: 583  HGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVS 762
            HGVCK GI+DEALRLLKQME  G  PNVFTYTML+DGFC A ++ EA + L  M++R ++
Sbjct: 273  HGVCKLGILDEALRLLKQMETCGHKPNVFTYTMLIDGFCKANRIEEAFRFLGIMEERGIA 332

Query: 763  PNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEF 942
            PN+AT R+LIHG+F+      AY  +    EK  ++ E+ CSTML+CLS   M  E    
Sbjct: 333  PNDATIRSLIHGSFKGNNPKDAYDLVCGLLEKQQVLSEEACSTMLYCLSKEGMVSEILSL 392

Query: 943  LNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLLE 1122
            L K+ E+G   +   F  ++ C +K  + S+ C++L+ + ERGGKP F +Y+I+  GL  
Sbjct: 393  LGKIEEKGYFPNPSVFRGLMICLVKGSKFSESCKLLDKFRERGGKPCFDSYIILTSGLYG 452

Query: 1123 EKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLIT 1302
                 E   Y+  ++LDG L SV +YN+LID F KL +++ A +  ++M  +G+ P L+T
Sbjct: 453  VGRNKEGDLYVGYLVLDGLLCSVYAYNSLIDTFSKLRLMNRASQFFDEMIEKGYTPTLVT 512

Query: 1303 FNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEMV 1482
            FNTLI G+ K+    KAR +L+ LL    KPDV+TFS++I+GLC+  ++DDAF CFNEMV
Sbjct: 513  FNTLIDGYCKSERVEKARELLLMLLNLQFKPDVITFSSIINGLCRIGQLDDAFKCFNEMV 572

Query: 1483 EWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEKFE 1662
            EWG+SPNA+TYN +I SLC +G + +S+KL + M S+GI PD+FSYN +IL+LC+I   E
Sbjct: 573  EWGVSPNALTYNIMIHSLCVMGEMGRSLKLLKEMESQGITPDVFSYNAVILNLCKIGNLE 632

Query: 1663 RAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYSLVA 1842
             AQ++FS+ML+ GV PD  TY +FIK LC++ R + AKE + VME +   PN  SY L+ 
Sbjct: 633  MAQNIFSSMLKSGVTPDHYTYNAFIKVLCNSKRTDEAKELLGVMEANGCVPNCYSYGLIV 692

Query: 1843 DTLIRIGKPAEAEEFIRKCKRKG 1911
            DTL R G   EA+E I K K KG
Sbjct: 693  DTLSRQGCFQEAQELISKFKSKG 715



 Score =  124 bits (311), Expect = 2e-25
 Identities = 97/447 (21%), Positives = 192/447 (42%)
 Frame = +1

Query: 574  ALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQR 753
            ALI+   + G+   A  + +++   G       Y  ++D    +  +  A    + M   
Sbjct: 200  ALINSWGRLGLAKYASEVFEKISFLGFKATTRVYNTVIDALVKSNCLDLAYFKFQQMPAE 259

Query: 754  KVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEA 933
              SP+  T+  LIHG                   K  ++DE                  A
Sbjct: 260  GCSPDRFTYNHLIHGVC-----------------KLGILDE------------------A 284

Query: 934  TEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKG 1113
               L +M   G   +  T+ +++    K+ R+ +    L    ERG  P  +T   ++ G
Sbjct: 285  LRLLKQMETCGHKPNVFTYTMLIDGFCKANRIEEAFRFLGIMEERGIAPNDATIRSLIHG 344

Query: 1114 LLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPN 1293
              +  +  +A   +  ++    + S E+ +T++ C  K GM+   + +L ++  +G+ PN
Sbjct: 345  SFKGNNPKDAYDLVCGLLEKQQVLSEEACSTMLYCLSKEGMVSEILSLLGKIEEKGYFPN 404

Query: 1294 LITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFN 1473
               F  L+    K    S++  +L K  E G KP   ++  L  GL    R  +      
Sbjct: 405  PSVFRGLMICLVKGSKFSESCKLLDKFRERGGKPCFDSYIILTSGLYGVGRNKEGDLYVG 464

Query: 1474 EMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIE 1653
             +V  G+  +   YN+LI +   +  ++++ + F  M  +G  P + ++N LI   C+ E
Sbjct: 465  YLVLDGLLCSVYAYNSLIDTFSKLRLMNRASQFFDEMIEKGYTPTLVTFNTLIDGYCKSE 524

Query: 1654 KFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYS 1833
            + E+A+ L   +L     PD  T++S I  LC  G+++ A +    M    +SPN+ +Y+
Sbjct: 525  RVEKARELLLMLLNLQFKPDVITFSSIINGLCRIGQLDDAFKCFNEMVEWGVSPNALTYN 584

Query: 1834 LVADTLIRIGKPAEAEEFIRKCKRKGI 1914
            ++  +L  +G+   + + +++ + +GI
Sbjct: 585  IMIHSLCVMGEMGRSLKLLKEMESQGI 611



 Score = 74.3 bits (181), Expect = 3e-10
 Identities = 44/163 (26%), Positives = 81/163 (49%)
 Frame = +1

Query: 385  RLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRF 564
            R+G    A + F ++   G+ P    YN MI +L     +  +    ++M S   +PD F
Sbjct: 557  RIGQLDDAFKCFNEMVEWGVSPNALTYNIMIHSLCVMGEMGRSLKLLKEMESQGITPDVF 616

Query: 565  TYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETM 744
            +YNA+I  +CK G ++ A  +   M  SG  P+ +TY   +   CN+K+  EA ++L  M
Sbjct: 617  SYNAVILNLCKIGNLEMAQNIFSSMLKSGVTPDHYTYNAFIKVLCNSKRTDEAKELLGVM 676

Query: 745  KQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMD 873
            +     PN  ++  ++    R     +A + +S++  K +L++
Sbjct: 677  EANGCVPNCYSYGLIVDTLSRQGCFQEAQELISKFKSKGSLIN 719


>ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297331015|gb|EFH61434.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 653

 Score =  614 bits (1584), Expect = e-173
 Identities = 294/619 (47%), Positives = 421/619 (68%)
 Frame = +1

Query: 1    PLISSGITQQAASAKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQN 180
            P +S  +        PL+   ++ V+ +KD  L L+ E   +   L+ R ++S+LQN  N
Sbjct: 23   PKLSKTLNSSGKPTNPLNQRYISQVIERKDWFLILNQEFTTHRIGLNIRFVISVLQNQDN 82

Query: 181  PLFCFRLYIWAANFDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVL 360
            PL   R Y+W +N D   A   S++ VLG+ L+RKGP++L+ +L+KE+R SGYR+T++++
Sbjct: 83   PLHSLRFYLWVSNTDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRESGYRITDELM 142

Query: 361  CMLFSSWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPS 540
            C+L  SWGRLGLAKY N++F Q+  LG++P+TRLYN++I+ALV++NSL+LAY KFQQM S
Sbjct: 143  CVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLNLAYVKFQQMRS 202

Query: 541  DNCSPDRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAE 720
            D+C PDRFTYN LIHGVCK+G+VDEA+RL+KQME  G  PNVFTYT+L+DGF  A ++ E
Sbjct: 203  DDCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEREGNRPNVFTYTILIDGFLIAGRIEE 262

Query: 721  ACQVLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLH 900
            A + LE M+ RK++PNEAT R L+HG FRC+   +A++ L  + EK +++      T+L+
Sbjct: 263  ALKQLEMMQVRKLNPNEATIRTLVHGIFRCLPPCEAFEVLLGFMEKNSILQRVAYDTVLY 322

Query: 901  CLSTNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKP 1080
            CLS N+MA E   FL K GERG   D+ TF   + C LK   L + C + + +V RG KP
Sbjct: 323  CLSNNSMAKETALFLRKTGERGYIPDSSTFNAAMNCLLKGHHLVETCGIFDCFVSRGAKP 382

Query: 1081 GFSTYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEIL 1260
            GF+ YL++V+ LL  +      +YL++M  DG LSSV +YN +IDC  K    ++A   L
Sbjct: 383  GFNGYLVLVQALLNAQRFSAGDRYLKQMGGDGLLSSVYTYNAVIDCLCKARRTEHAAMFL 442

Query: 1261 EQMRNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQA 1440
             +M+++G  PNLITFNT +SG+S  GD  K   ++ KLLEHG  PDV+TFS +I+ LC+A
Sbjct: 443  TEMQDRGISPNLITFNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRA 502

Query: 1441 HRIDDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSY 1620
              I DAF+CF EM+EWGI PN ITYN LIRS C+ G+  +S+KLF  M+  G+ P++++Y
Sbjct: 503  KEIKDAFDCFKEMLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAY 562

Query: 1621 NPLILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMEL 1800
            N +I S C+++K ++A+ L   MLR G+ PD  TY++ IKAL ++GR   A+E    ME 
Sbjct: 563  NAIIQSFCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMER 622

Query: 1801 HSISPNSQSYSLVADTLIR 1857
            H   P+S +  LV +  +R
Sbjct: 623  HGCVPDSYTKRLVEELDLR 641



 Score = 69.7 bits (169), Expect = 6e-09
 Identities = 45/199 (22%), Positives = 84/199 (42%)
 Frame = +1

Query: 439  GLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALIHGVCKRGIVDEA 618
            G+ P    +N+ +        +   +   +++    C+PD  T++ +I+ +C+   + +A
Sbjct: 449  GISPNLITFNTFLSGYSAGGDVKKVHGVVEKLLEHGCNPDVITFSLIINCLCRAKEIKDA 508

Query: 619  LRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVSPNEATFRALIHG 798
                K+M   G  PN  TY +L+   C+      + ++   MK+  +SPN   + A+I  
Sbjct: 509  FDCFKEMLEWGIKPNEITYNILIRSSCSTGDTGRSVKLFANMKESGLSPNLYAYNAIIQS 568

Query: 799  TFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEFLNKMGERGKCAD 978
              +     KA + L          D    ST++  LS +    EA E  + M   G   D
Sbjct: 569  FCKMKKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSMERHGCVPD 628

Query: 979  TLTFGVVVACALKSLRLSQ 1035
            + T  +V    L+   LS+
Sbjct: 629  SYTKRLVEELDLRQSGLSR 647


>ref|XP_006355396.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X1 [Solanum
            tuberosum] gi|565377884|ref|XP_006355397.1| PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like isoform X2 [Solanum
            tuberosum]
          Length = 709

 Score =  608 bits (1569), Expect = e-171
 Identities = 289/625 (46%), Positives = 422/625 (67%)
 Frame = +1

Query: 40   AKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQNPLFCFRLYIWAAN 219
            A  +DH   + +L++KD  L L+ E +    +L+ + +VS+LQN +NPL  FR YIW   
Sbjct: 77   ASVIDHKYFSQILARKDWYLLLNHEYKAKRVTLNQQEVVSILQNQENPLHPFRFYIWVLK 136

Query: 220  FDAKLASHPSVRRVLGDVLWRKGPIILTADLMKEVRVSGYRLTEDVLCMLFSSWGRLGLA 399
                 A + SV+ VL +VL+RKGP++L+A+L++++R SG  +T D+LC+L  SWGRLGL 
Sbjct: 137  ICPSFAKNQSVKVVLSNVLYRKGPLLLSAELVQDIRNSGNVVTVDLLCVLIGSWGRLGLG 196

Query: 400  KYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNAL 579
            KY  +I  Q+  LGL P TRLYN++I+AL++ NSLDLAY KFQQM  DNC PD+FTYN L
Sbjct: 197  KYCTDILEQVSYLGLAPNTRLYNAVIDALIKCNSLDLAYLKFQQMQVDNCKPDKFTYNIL 256

Query: 580  IHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKV 759
            IHGVCK G+V+EALRL+KQME  G  PNVFTYT+LV+GFCNAK+V EA ++   MK R +
Sbjct: 257  IHGVCKAGVVEEALRLVKQMEGVGYSPNVFTYTILVEGFCNAKRVDEAFELFGVMKSRGI 316

Query: 760  SPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATE 939
             PNEAT R+L++G F C+   K ++ LSR+ EK +++    CS+MLHCLSTN +  EA +
Sbjct: 317  VPNEATVRSLVNGVFHCVAPDKGFELLSRWLEKEHVLPNVACSSMLHCLSTNFLPREAAQ 376

Query: 940  FLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLL 1119
             L    +RG   D  T  + + C +K L L   C++L+    RG K     YL +   L 
Sbjct: 377  LLRISIDRGYLLDNSTLNIALTCLIKGLELDDTCQILDFITVRGVKVSVDIYLALADALY 436

Query: 1120 EEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLI 1299
            +   V + ++Y+ ++  DG +S+   YN +IDCF K+ M+D A +  + M  +G  PN++
Sbjct: 437  KGGRVEQGNKYMDQVFKDGLVSNTFFYNRVIDCFCKIKMMDKASDAFKDMLQRGVTPNIV 496

Query: 1300 TFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNCFNEM 1479
            TFNTLISG+SK G+ +K   +LV LLEHG +PD+ TFS++ID LC+ +RIDDA +C  EM
Sbjct: 497  TFNTLISGYSKVGEVNKVHELLVILLEHGFRPDIFTFSSMIDSLCRVNRIDDALDCLTEM 556

Query: 1480 VEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLILSLCRIEKF 1659
            VEWG++PNA+ YN LIR+LC +G++ +S+KL ++M+ +GI  D+FS+N LI S C++ K 
Sbjct: 557  VEWGVAPNAVPYNILIRALCVLGDVGRSLKLLRKMQGDGIKADVFSFNALIQSFCKMNKI 616

Query: 1660 ERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISPNSQSYSLV 1839
            + AQ L  +ML   ++PD +TY +FI+ALC+ GR + AK     ME +   P+  +  L 
Sbjct: 617  DEAQRLLISMLTLDLIPDNHTYGAFIRALCNLGRFDEAKNLFFSMEANGCVPDDLTCKLY 676

Query: 1840 ADTLIRIGKPAEAEEFIRKCKRKGI 1914
             D+LI+ G   EA++ +++C ++G+
Sbjct: 677  LDSLIQSGHTKEAQDVLKECGKRGM 701



 Score =  115 bits (289), Expect = 8e-23
 Identities = 82/396 (20%), Positives = 173/396 (43%)
 Frame = +1

Query: 730  VLETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLS 909
            +LE +    ++PN   + A+I    +C     AY    +        D+   + ++H + 
Sbjct: 202  ILEQVSYLGLAPNTRLYNAVIDALIKCNSLDLAYLKFQQMQVDNCKPDKFTYNILIHGVC 261

Query: 910  TNNMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFS 1089
               +  EA   + +M   G   +  T+ ++V     + R+ +  E+      RG  P  +
Sbjct: 262  KAGVVEEALRLVKQMEGVGYSPNVFTYTILVEGFCNAKRVDEAFELFGVMKSRGIVPNEA 321

Query: 1090 TYLIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQM 1269
            T   +V G+       +  + L + +   ++    + ++++ C     +   A ++L   
Sbjct: 322  TVRSLVNGVFHCVAPDKGFELLSRWLEKEHVLPNVACSSMLHCLSTNFLPREAAQLLRIS 381

Query: 1270 RNQGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRI 1449
             ++G+  +  T N  ++   K  +      IL  +   G+K  V  + AL D L +  R+
Sbjct: 382  IDRGYLLDNSTLNIALTCLIKGLELDDTCQILDFITVRGVKVSVDIYLALADALYKGGRV 441

Query: 1450 DDAFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPL 1629
            +      +++ + G+  N   YN +I   C +  +DK+   F+ M   G+ P+I ++N L
Sbjct: 442  EQGNKYMDQVFKDGLVSNTFFYNRVIDCFCKIKMMDKASDAFKDMLQRGVTPNIVTFNTL 501

Query: 1630 ILSLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSI 1809
            I    ++ +  +   L   +L  G  PD  T++S I +LC   RI+ A + +  M    +
Sbjct: 502  ISGYSKVGEVNKVHELLVILLEHGFRPDIFTFSSMIDSLCRVNRIDDALDCLTEMVEWGV 561

Query: 1810 SPNSQSYSLVADTLIRIGKPAEAEEFIRKCKRKGIR 1917
            +PN+  Y+++   L  +G    + + +RK +  GI+
Sbjct: 562  APNAVPYNILIRALCVLGDVGRSLKLLRKMQGDGIK 597



 Score = 95.9 bits (237), Expect = 8e-17
 Identities = 79/315 (25%), Positives = 124/315 (39%)
 Frame = +1

Query: 568  YNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMK 747
            Y AL   + K G V++  + + Q+   G   N F Y  ++D FC  K + +A    + M 
Sbjct: 428  YLALADALYKGGRVEQGNKYMDQVFKDGLVSNTFFYNRVIDCFCKIKMMDKASDAFKDML 487

Query: 748  QRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAI 927
            QR V+PN  TF  LI G  +     K +                                
Sbjct: 488  QRGVTPNIVTFNTLISGYSKVGEVNKVH-------------------------------- 515

Query: 928  EATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVV 1107
               E L  + E G   D  TF  ++    +  R+    + L   VE G  P    Y I++
Sbjct: 516  ---ELLVILLEHGFRPDIFTFSSMIDSLCRVNRIDDALDCLTEMVEWGVAPNAVPYNILI 572

Query: 1108 KGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFH 1287
            + L     V  + + LRKM  DG  + V S+N LI  F K+  +D A  +L  M      
Sbjct: 573  RALCVLGDVGRSLKLLRKMQGDGIKADVFSFNALIQSFCKMNKIDEAQRLLISMLTLDLI 632

Query: 1288 PNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDDAFNC 1467
            P+  T+   I      G   +A+++   +  +G  PD +T    +D L Q+    +A + 
Sbjct: 633  PDNHTYGAFIRALCNLGRFDEAKNLFFSMEANGCVPDDLTCKLYLDSLIQSGHTKEAQDV 692

Query: 1468 FNEMVEWGISPNAIT 1512
              E  + G+    IT
Sbjct: 693  LKECGKRGMLLEPIT 707


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  606 bits (1562), Expect = e-170
 Identities = 294/612 (48%), Positives = 418/612 (68%), Gaps = 3/612 (0%)
 Frame = +1

Query: 25   QQAASAKPLDHVRLASVLSQKDPLLALDSELRRYEPSLSPRIIVSLLQNLQNPLFCFRLY 204
            + + S KP+D   ++ +L  KD  L L+ E +     LSP+ +VS+LQN  NPL   R Y
Sbjct: 83   KHSLSLKPIDRSYISKILLSKDWFLLLNHEFKAKRVVLSPQFVVSILQNQDNPLSAIRFY 142

Query: 205  IWAANFDAKLASHPSVRRVLGDVLWRKGP---IILTADLMKEVRVSGYRLTEDVLCMLFS 375
            IW +N D  L     ++ VL   L R+GP   ++L+ DL+++++ SG ++TE++LC+LF 
Sbjct: 143  IWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESGLKVTEELLCILFG 202

Query: 376  SWGRLGLAKYANEIFGQLPVLGLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSP 555
            SWGRLGLA Y  E+FGQ+ +LGL PTTRLYN++++AL+++NSLDLAY KFQQM S NC P
Sbjct: 203  SWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVP 262

Query: 556  DRFTYNALIHGVCKRGIVDEALRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVL 735
            DRFTYN LIHGVC+ G+VDEALRL+KQME  G  PNVFTYT+L+DGF NAK+  EA +VL
Sbjct: 263  DRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVL 322

Query: 736  ETMKQRKVSPNEATFRALIHGTFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTN 915
            +TMK+R V PNEAT R+L+HG FRCI   KA++ L  + E+   + + VC  +L+CLS N
Sbjct: 323  QTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVCDNILYCLSNN 382

Query: 916  NMAIEATEFLNKMGERGKCADTLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTY 1095
            +MA EA  FL K G+ G    + TF + +AC LK L L   C + ++ V+ G KPGFSTY
Sbjct: 383  SMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTY 442

Query: 1096 LIVVKGLLEEKHVVEASQYLRKMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRN 1275
            L +++ L +   +   ++Y+ ++I DG +S++ SYN +IDC  K   +D A E+   + N
Sbjct: 443  LTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHN 502

Query: 1276 QGFHPNLITFNTLISGFSKTGDSSKARSILVKLLEHGLKPDVVTFSALIDGLCQAHRIDD 1455
            +G  PN++T+NTLI GF + G+  KA+ +L  LLE   +PD+ TF++LIDGLCQAH+ ++
Sbjct: 503  RGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHEN 562

Query: 1456 AFNCFNEMVEWGISPNAITYNTLIRSLCAVGNIDKSMKLFQRMRSEGIDPDIFSYNPLIL 1635
            AF CF EMVEW + PN ITYN LI S CA+G++ +S  L ++M+  GI PD FS+N LI 
Sbjct: 563  AFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQ 622

Query: 1636 SLCRIEKFERAQHLFSAMLRFGVVPDANTYASFIKALCDAGRIEGAKEAMRVMELHSISP 1815
                  +F++A+ LF +MLR G+ PD  TY + IK+LC +GR + A+E    M+ +  +P
Sbjct: 623  GYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTP 682

Query: 1816 NSQSYSLVADTL 1851
            +S + SL +DTL
Sbjct: 683  DSYTCSLFSDTL 694



 Score = 94.0 bits (232), Expect = 3e-16
 Identities = 75/334 (22%), Positives = 124/334 (37%)
 Frame = +1

Query: 439  GLRPTTRLYNSMIEALVRANSLDLAYFKFQQMPSDNCSPDRFTYNALIHGVCKRGIVDEA 618
            G  P++  +N  +  +++   L +    F         P   TY  LI  + K G ++  
Sbjct: 399  GYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIG 458

Query: 619  LRLLKQMECSGCPPNVFTYTMLVDGFCNAKKVAEACQVLETMKQRKVSPNEATFRALIHG 798
             R + ++   G   N+++Y M++D  C  K +  A ++   +  R +SPN  T+  LI G
Sbjct: 459  NRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGG 518

Query: 799  TFRCIGSGKAYKTLSRYFEKANLMDEQVCSTMLHCLSTNNMAIEATEFLNKMGERGKCAD 978
              R                                   N    +A E L  + E     D
Sbjct: 519  FCR-----------------------------------NGNMDKAQELLEMLLESRFRPD 543

Query: 979  TLTFGVVVACALKSLRLSQVCEMLNSYVERGGKPGFSTYLIVVKGLLEEKHVVEASQYLR 1158
              TF  ++    ++ +           VE    P   TY I++        V  ++  LR
Sbjct: 544  IFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLR 603

Query: 1159 KMILDGYLSSVESYNTLIDCFVKLGMLDNAVEILEQMRNQGFHPNLITFNTLISGFSKTG 1338
            +M L G      S+N LI  +        A ++ + M   G  P+  T+  LI    K+G
Sbjct: 604  QMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSG 663

Query: 1339 DSSKARSILVKLLEHGLKPDVVTFSALIDGLCQA 1440
               KAR I + + E+G  PD  T S   D L  +
Sbjct: 664  RHDKAREIFLSMKENGCTPDSYTCSLFSDTLAHS 697


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