BLASTX nr result

ID: Zingiber25_contig00013183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00013183
         (403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006373853.1| hypothetical protein POPTR_0016s08440g [Popu...    60   3e-07
gb|ABR45692.1| WRKY13 [Herrania nitida]                                56   6e-06

>ref|XP_006373853.1| hypothetical protein POPTR_0016s08440g [Populus trichocarpa]
           gi|566209348|ref|XP_002323445.2| hypothetical protein
           POPTR_0016s08440g [Populus trichocarpa]
           gi|550321111|gb|ERP51650.1| hypothetical protein
           POPTR_0016s08440g [Populus trichocarpa]
           gi|550321112|gb|EEF05206.2| hypothetical protein
           POPTR_0016s08440g [Populus trichocarpa]
          Length = 382

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
 Frame = +1

Query: 142 VERLFDGQIAEIVYEGDNIHPKSQPPKRRLSSGSQEQAFVADENSQIRDRQSAVMEYY*F 321
           VER FDGQIAEIVY+G++ H K QPPKR  SSG+Q    V+D N+Q  DR++ +      
Sbjct: 222 VERSFDGQIAEIVYKGEHNHSKPQPPKRN-SSGTQGLGAVSDSNAQ--DRKAGIQSNKGG 278

Query: 322 AAARGKPQGIVLLQDS-NAFLITDNFEF 402
            +  G  +  V++Q S ++ ++ D F +
Sbjct: 279 ISGEGVQEPRVVVQSSTDSEILGDGFRW 306


>gb|ABR45692.1| WRKY13 [Herrania nitida]
          Length = 196

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/46 (60%), Positives = 33/46 (71%)
 Frame = +1

Query: 142 VERLFDGQIAEIVYEGDNIHPKSQPPKRRLSSGSQEQAFVADENSQ 279
           VER FDGQIAEIVY+G++ H K QPPKR  SSG+Q   F +D   Q
Sbjct: 7   VERXFDGQIAEIVYKGEHXHSKPQPPKRN-SSGTQGLGFASDGTGQ 51


Top