BLASTX nr result
ID: Zingiber25_contig00013150
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00013150
(1209 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1... 310 1e-81
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253... 304 4e-80
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm... 299 1e-78
ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding prote... 296 1e-77
ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Caps... 295 2e-77
gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus pe... 295 3e-77
gb|ADL36850.1| WHY domain class transcription factor [Malus dome... 295 3e-77
ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Popu... 295 3e-77
ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, ch... 294 4e-77
ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabi... 294 6e-77
ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protei... 291 5e-76
pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regul... 291 5e-76
ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyra... 290 6e-76
ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Ar... 289 1e-75
ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding prote... 289 2e-75
ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citr... 289 2e-75
ref|XP_006438626.1| hypothetical protein CICLE_v10032427mg [Citr... 288 3e-75
ref|XP_002315793.2| hypothetical protein POPTR_0010s10260g [Popu... 288 4e-75
ref|XP_002875143.1| ATWHY3/PTAC11 [Arabidopsis lyrata subsp. lyr... 285 3e-74
ref|NP_178377.2| single-stranded DNA-binding protein WHY3 [Arabi... 285 3e-74
>gb|EOY02045.1| SsDNA-binding transcriptional regulator isoform 1 [Theobroma cacao]
Length = 270
Score = 310 bits (793), Expect = 1e-81
Identities = 147/234 (62%), Positives = 190/234 (81%), Gaps = 2/234 (0%)
Frame = -1
Query: 1044 LALNYRRKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALNSKVFVGYSIYK 865
L+L + S++ +S++ DQ+++ +S + P L + +VG+S+YK
Sbjct: 45 LSLTPKPSKFSLKCRQSEYFDQQQRFSNS--------SSTASPPASGLPPRFYVGHSVYK 96
Query: 864 GKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGH 685
GKAALTVEPRAPEF PLDSGA+K+S+EGF+LLQFAPA G RQYDWSRKQVFSLS+ EIG
Sbjct: 97 GKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGA 156
Query: 684 LMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYI 505
L+SLGA++SCEFFHDPFKG++EEGK+RKVLKVEPLPDG+G+FFNL VQNRLLN+D++IYI
Sbjct: 157 LISLGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLGVQNRLLNLDENIYI 216
Query: 504 PISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
PI++ EFT+LNSA +FI+PYLLGWH+FAN+IKPE + R+NNA R+G D+EW R
Sbjct: 217 PITRAEFTVLNSAFSFILPYLLGWHAFANSIKPEEASRVNNANPRYGGDYEWSR 270
>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
gi|296086421|emb|CBI32010.3| unnamed protein product
[Vitis vinifera]
Length = 268
Score = 304 bits (779), Expect = 4e-80
Identities = 145/198 (73%), Positives = 173/198 (87%), Gaps = 7/198 (3%)
Frame = -1
Query: 921 RKPP------GALNSKVFVGYSIYKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFA 760
R+PP GAL +VFVG+SIYKGKAALTVEP+APEF PLDSGA+KVSKEGF+LLQFA
Sbjct: 71 RQPPNDSSFGGALQPRVFVGHSIYKGKAALTVEPKAPEFTPLDSGAFKVSKEGFVLLQFA 130
Query: 759 PAVGNRQYDWSRKQVFSLSIPEIGHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPL 580
PA G RQYDW RKQVFSLS+ EIG L+SLGA++SCEFFHDPFKGR+EEGK+RKVLKVEPL
Sbjct: 131 PAAGVRQYDWGRKQVFSLSVTEIGSLISLGARESCEFFHDPFKGRSEEGKVRKVLKVEPL 190
Query: 579 PDGTGYFFNLSVQNRLLNMDDSIYIPISKPEFTILNSALNFIVPYLLGWHSFANAIKPEN 400
PDG+G+FFNLSVQN+LLNMD++IYIP+++ EF +L SA NFIVPYLLGWH++AN+IKP++
Sbjct: 191 PDGSGHFFNLSVQNKLLNMDENIYIPVTRAEFAVLISAFNFIVPYLLGWHAYANSIKPDD 250
Query: 399 SFRLNNAR-FGADFEWGR 349
+ R+NNA DFEW R
Sbjct: 251 TSRVNNANPRSGDFEWSR 268
>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
gi|223540620|gb|EEF42183.1| conserved hypothetical
protein [Ricinus communis]
Length = 271
Score = 299 bits (766), Expect = 1e-78
Identities = 150/236 (63%), Positives = 191/236 (80%), Gaps = 2/236 (0%)
Frame = -1
Query: 1050 RTLALNYRRKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALNSKVFVGYSI 871
R L+ N R +V+ +S+F DQ++Q +SF+ + P A+ +V+VG+SI
Sbjct: 41 RRLSTNTNR---AVKCRQSEFYDQQQQ-KYNPSRPSSNDSSFASQSPAAV-PRVYVGHSI 95
Query: 870 YKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEI 691
YKGKAALTVEPRAPEFA LDSGA+KV++EGF+LLQFAPA G RQYDWSRKQVFSLS+ EI
Sbjct: 96 YKGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEI 155
Query: 690 GHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSI 511
G ++SLGA+DSCEFFHDP KG+++EGKIRKVLKVEPLPDG+G+FFNLSVQN+ +NMD+SI
Sbjct: 156 GTIISLGARDSCEFFHDPNKGKSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKPMNMDESI 215
Query: 510 YIPISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
YIP++K EF +L SA N+I+PYLLGWH+FAN+IKP+ + +NNA RFG D+EW R
Sbjct: 216 YIPVTKAEFAVLISAFNYILPYLLGWHTFANSIKPDLNGHMNNANPRFGGDYEWSR 271
>ref|XP_004297331.1| PREDICTED: single-stranded DNA-binding protein WHY1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 270
Score = 296 bits (757), Expect = 1e-77
Identities = 139/233 (59%), Positives = 188/233 (80%), Gaps = 4/233 (1%)
Frame = -1
Query: 1035 NYRRKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALN--SKVFVGYSIYKG 862
++R++ L+++ +S++ DQ+R S + P GA ++ +VG+SIYKG
Sbjct: 41 SFRKRRLALKCRQSEYFDQQRLTA---PNPPSTAASAPQSPAGASAGPARFYVGHSIYKG 97
Query: 861 KAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGHL 682
KAALTVEP+APEF LDSGA+K+S+EGF+LLQFAPA G R YDWSRKQVFSLS+ EIG +
Sbjct: 98 KAALTVEPKAPEFTALDSGAFKMSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSI 157
Query: 681 MSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYIP 502
+SLGAK+SCEFFHDPFKG++EEGK+RKVLKVEPLPDG+G FFNLSVQN+L+N+D++IYIP
Sbjct: 158 VSLGAKESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGRFFNLSVQNKLINLDENIYIP 217
Query: 501 ISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
+++ EF +LNSA N+++PYL+GWH++ N++KPE+ R+NNA R+G DFEW R
Sbjct: 218 VTRAEFAVLNSAFNYLLPYLIGWHAYVNSVKPEDMSRVNNATPRYGGDFEWSR 270
>ref|XP_006303274.1| hypothetical protein CARUB_v10010024mg [Capsella rubella]
gi|482571985|gb|EOA36172.1| hypothetical protein
CARUB_v10010024mg [Capsella rubella]
Length = 266
Score = 295 bits (756), Expect = 2e-77
Identities = 140/225 (62%), Positives = 183/225 (81%), Gaps = 2/225 (0%)
Frame = -1
Query: 1017 LSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALNSKVFVGYSIYKGKAALTVEP 838
LSV+ ++D+ +++R S+S + ++ +VG+SIYKGKAALTVEP
Sbjct: 48 LSVKSRQTDYFEKQR------FGDSSSSPSYSSQNAEGSPARFYVGHSIYKGKAALTVEP 101
Query: 837 RAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGHLMSLGAKDS 658
RAPEF LDSGA+K+SK+GF+LLQFAP+ G RQYDWS+KQVFSLS+ EIG L+SLG K+S
Sbjct: 102 RAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPKES 161
Query: 657 CEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYIPISKPEFTI 478
CEFFHDPFKG+++EGK+RKVLKVEPLPDG+G+FFNLSVQN+LLN+DD+IYIPI++ EF +
Sbjct: 162 CEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNVDDNIYIPITRAEFAV 221
Query: 477 LNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
L SA NF++PYL+GWH+FAN+IKPE+S R+NNA +G D+EW R
Sbjct: 222 LISAFNFVLPYLIGWHAFANSIKPEDSNRMNNASPNYGGDYEWNR 266
>gb|EMJ23674.1| hypothetical protein PRUPE_ppa009776mg [Prunus persica]
Length = 278
Score = 295 bits (754), Expect = 3e-77
Identities = 142/233 (60%), Positives = 185/233 (79%), Gaps = 2/233 (0%)
Frame = -1
Query: 1041 ALNYRRKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALNSKVFVGYSIYKG 862
+L+ RK LS++ +S++ DQ+R P + L + FVG+SIYKG
Sbjct: 46 SLSSSRKRLSLKCRQSEYFDQQRASTASAPNKPSPPAPQTPAGGTGLPPRFFVGHSIYKG 105
Query: 861 KAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGHL 682
KAALTVEP+APEF LDSGA+K+S+EGF+LLQFAPA G R YDWSRKQVFSLS+ EIG L
Sbjct: 106 KAALTVEPKAPEFTALDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSL 165
Query: 681 MSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYIP 502
+ LG+K+S EFFHDPFKG+++EGK+RKVLKVEPLPDG+G+FFNLSVQN+L+N+D+S+YIP
Sbjct: 166 VCLGSKESIEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESVYIP 225
Query: 501 ISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNN--ARFGADFEWGR 349
I++ EF +L SA NFI+PY+LGWH++AN+IKPE+S R+NN +R+G DFEW R
Sbjct: 226 ITRAEFAVLKSAFNFILPYILGWHAYANSIKPEDSSRMNNSSSRYGGDFEWSR 278
>gb|ADL36850.1| WHY domain class transcription factor [Malus domestica]
Length = 276
Score = 295 bits (754), Expect = 3e-77
Identities = 144/230 (62%), Positives = 186/230 (80%), Gaps = 4/230 (1%)
Frame = -1
Query: 1026 RKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGA--LNSKVFVGYSIYKGKAA 853
RK LS++ +S++ DQ+R P+ P GA + + +VG+SIYKGKAA
Sbjct: 50 RKRLSLKCRQSEYFDQQRT---STAASPNKPSPAPPTPAGATGMAPRFYVGHSIYKGKAA 106
Query: 852 LTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGHLMSL 673
LTVEP+APEF PLDSGA+K+S+EGF+LLQFAPA G R YDWSRKQVFSLS+ EIG L+SL
Sbjct: 107 LTVEPKAPEFTPLDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQVFSLSVTEIGSLVSL 166
Query: 672 GAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYIPISK 493
G+K+S EFFHDPFKG+++EGK+RKVLKVEPLPDG+G+FFNLSVQN+L+N+D+SIYIPI++
Sbjct: 167 GSKESLEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPITR 226
Query: 492 PEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
EF +L SA NFI+PY+LGWH++AN+IKPE+S R NN+ ++G DFEW R
Sbjct: 227 AEFAVLKSAFNFILPYILGWHAYANSIKPEDSSRANNSGLKYGGDFEWSR 276
>ref|XP_002311601.1| hypothetical protein POPTR_0008s14840g [Populus trichocarpa]
gi|118485247|gb|ABK94483.1| unknown [Populus
trichocarpa] gi|222851421|gb|EEE88968.1| hypothetical
protein POPTR_0008s14840g [Populus trichocarpa]
Length = 265
Score = 295 bits (754), Expect = 3e-77
Identities = 137/194 (70%), Positives = 170/194 (87%), Gaps = 2/194 (1%)
Frame = -1
Query: 924 SRKPPGALNSKVFVGYSIYKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGN 745
S P G KVFVG+SIYKGKAALTVEPR+PEF+PLDSGAYK+ KEGF+LLQFAPA
Sbjct: 72 SAPPVGESPPKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQFAPAASV 131
Query: 744 RQYDWSRKQVFSLSIPEIGHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTG 565
RQYDW+RKQVFSLS+ EIGHL+SL AK SCEFFHDP KG+++EGK+RK+LKVEPLPDG+G
Sbjct: 132 RQYDWTRKQVFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVEPLPDGSG 191
Query: 564 YFFNLSVQNRLLNMDDSIYIPISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLN 385
+FFNLSVQN++LN+D++IYIP++K E+T+L SA N+I+PYLLGWH++AN+IKP++S R N
Sbjct: 192 HFFNLSVQNKVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKPDDSSRGN 251
Query: 384 NA--RFGADFEWGR 349
NA R+G D+EW R
Sbjct: 252 NASPRYGGDYEWSR 265
>ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, chloroplastic [Solanum
tuberosum] gi|75174555|sp|Q9LL85.1|WHY1_SOLTU RecName:
Full=Single-stranded DNA-binding protein WHY1,
chloroplastic; AltName: Full=DNA-binding protein p24;
AltName: Full=PR-10a binding factor 2; Short=PBF-2;
AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
Precursor gi|9651810|gb|AAF91282.1|AF233342_1
DNA-binding protein p24 [Solanum tuberosum]
Length = 274
Score = 294 bits (753), Expect = 4e-77
Identities = 136/193 (70%), Positives = 169/193 (87%), Gaps = 2/193 (1%)
Frame = -1
Query: 921 RKPPGALNSKVFVGYSIYKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNR 742
++P GA KVFVGYSIYKGKAALTVEPR+PEF+PLDSGA+K+S+EG ++LQFAPA G R
Sbjct: 82 QQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVR 141
Query: 741 QYDWSRKQVFSLSIPEIGHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGY 562
QYDWSRKQVFSLS+ EIG ++SLGAKDSCEFFHDP KGR++EG++RKVLKVEPLPDG+G+
Sbjct: 142 QYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGH 201
Query: 561 FFNLSVQNRLLNMDDSIYIPISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNN 382
FFNLSVQN+L+N+D++IYIP++K EF +L SA NF++PYLLGWH+ N+ KPE++ R NN
Sbjct: 202 FFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNN 261
Query: 381 A--RFGADFEWGR 349
A R GA+ EW R
Sbjct: 262 ANPRSGAELEWNR 274
>ref|NP_172893.1| single-stranded DNA-binding protein WHY1 [Arabidopsis thaliana]
gi|75191428|sp|Q9M9S3.1|WHY1_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY1,
chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 1; AltName: Full=Protein WHIRLY
1; Short=AtWHY1; Flags: Precursor
gi|7262683|gb|AAF43941.1|AC012188_18 Contains similarity
to a hypothetical protein from Arabidopsis thaliana
gb|AC002521.2. EST gb|AI995686 comes from this gene
[Arabidopsis thaliana]
gi|12083312|gb|AAG48815.1|AF332452_1 putative DNA-binding
protein p24 [Arabidopsis thaliana]
gi|13877787|gb|AAK43971.1|AF370156_1 putative DNA-binding
protein p24 [Arabidopsis thaliana]
gi|16323418|gb|AAL15203.1| putative DNA-binding protein
p24 [Arabidopsis thaliana] gi|332191039|gb|AEE29160.1|
ssDNA-binding transcriptional regulator [Arabidopsis
thaliana]
Length = 263
Score = 294 bits (752), Expect = 6e-77
Identities = 138/227 (60%), Positives = 183/227 (80%), Gaps = 2/227 (0%)
Frame = -1
Query: 1023 KYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALNSKVFVGYSIYKGKAALTV 844
K SV+ ++D+ +++R +S S P L ++ +VG+SIYKGKAALTV
Sbjct: 47 KLFSVKSRQTDYFEKQR----------FGDSSSSPSPAEGLPARFYVGHSIYKGKAALTV 96
Query: 843 EPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGHLMSLGAK 664
+PRAPEF LDSGA+K+SK+GF+LLQFAP+ G RQYDWS+KQVFSLS+ EIG L+SLG +
Sbjct: 97 DPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPR 156
Query: 663 DSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYIPISKPEF 484
+SCEFFHDPFKG+++EGK+RKVLKVEPLPDG+G+FFNLSVQN+L+N+D+SIYIPI++ EF
Sbjct: 157 ESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEF 216
Query: 483 TILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
+L SA NF++PYL+GWH+FAN+IKPE + R+NNA +G D+EW R
Sbjct: 217 AVLISAFNFVLPYLIGWHAFANSIKPEETSRVNNASPNYGGDYEWNR 263
>ref|XP_004238773.1| PREDICTED: single-stranded DNA-bindig protein WHY1,
chloroplastic-like [Solanum lycopersicum]
Length = 268
Score = 291 bits (744), Expect = 5e-76
Identities = 135/189 (71%), Positives = 165/189 (87%), Gaps = 2/189 (1%)
Frame = -1
Query: 909 GALNSKVFVGYSIYKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDW 730
GA KVFVGYSIYKGKAALTVEPR+PEF+PLDSGA+K+SKEG ++LQFAPA G RQYDW
Sbjct: 80 GASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSKEGMVMLQFAPAAGVRQYDW 139
Query: 729 SRKQVFSLSIPEIGHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNL 550
SRKQVFSLS+ EIG ++SLGAKDSCEFFHDP KGR++EG++RKVLKVEPLPDG+G+FFNL
Sbjct: 140 SRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNL 199
Query: 549 SVQNRLLNMDDSIYIPISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--R 376
SVQN+L+N+D++IYIP++K EF +L SA NF++PYLLGWH+ N+ KPE++ R NN R
Sbjct: 200 SVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNNTNPR 259
Query: 375 FGADFEWGR 349
GA+ EW R
Sbjct: 260 SGAELEWNR 268
>pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regulator Pbf-2
gi|157878743|pdb|1L3A|B Chain B, Structure Of The Plant
Transcriptional Regulator Pbf-2 gi|157878744|pdb|1L3A|C
Chain C, Structure Of The Plant Transcriptional
Regulator Pbf-2 gi|157878745|pdb|1L3A|D Chain D,
Structure Of The Plant Transcriptional Regulator Pbf-2
Length = 227
Score = 291 bits (744), Expect = 5e-76
Identities = 134/191 (70%), Positives = 167/191 (87%), Gaps = 2/191 (1%)
Frame = -1
Query: 921 RKPPGALNSKVFVGYSIYKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNR 742
++P GA KVFVGYSIYKGKAALTVEPR+PEF+PLDSGA+K+S+EG ++LQFAPA G R
Sbjct: 28 QQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVR 87
Query: 741 QYDWSRKQVFSLSIPEIGHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGY 562
QYDWSRKQVFSLS+ EIG ++SLG KDSCEFFHDP KGR++EG++RKVLKVEPLPDG+G+
Sbjct: 88 QYDWSRKQVFSLSVTEIGSIISLGTKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGH 147
Query: 561 FFNLSVQNRLLNMDDSIYIPISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNN 382
FFNLSVQN+L+N+D++IYIP++K EF +L SA NF++PYLLGWH+ N+ KPE++ R NN
Sbjct: 148 FFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNN 207
Query: 381 A--RFGADFEW 355
A R GA+ EW
Sbjct: 208 ANPRSGAELEW 218
>ref|XP_002892804.1| ATWHY1/PTAC1 [Arabidopsis lyrata subsp. lyrata]
gi|297338646|gb|EFH69063.1| ATWHY1/PTAC1 [Arabidopsis
lyrata subsp. lyrata]
Length = 264
Score = 290 bits (743), Expect = 6e-76
Identities = 137/227 (60%), Positives = 183/227 (80%), Gaps = 2/227 (0%)
Frame = -1
Query: 1023 KYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALNSKVFVGYSIYKGKAALTV 844
K SV+ ++D+ +++R +S S + L ++ +VG+SIYKGKAALT+
Sbjct: 47 KLFSVKSRQTDYFEKQR---------FGDSSSSSSQNAEGLPARFYVGHSIYKGKAALTM 97
Query: 843 EPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGHLMSLGAK 664
EPRAPEF LDSGA+K+SK+GF+LLQFAP+ G RQYDWS+KQVFSLS+ EIG L+SLG +
Sbjct: 98 EPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPR 157
Query: 663 DSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYIPISKPEF 484
+SCEFFHDPFKG+++EGK+RKVLKVEPLPDG+G+FFNLSVQN+L+N+D+SIYIPI++ EF
Sbjct: 158 ESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEF 217
Query: 483 TILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
+L SA NF++PYL+GWH+FAN+IKPE++ R NNA +G D+EW R
Sbjct: 218 AVLISAFNFVLPYLIGWHAFANSIKPEDTNRANNAPPNYGGDYEWNR 264
>ref|NP_001077872.1| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
gi|330250525|gb|AEC05619.1| single-stranded DNA-binding
protein WHY3 [Arabidopsis thaliana]
Length = 267
Score = 289 bits (740), Expect = 1e-75
Identities = 139/228 (60%), Positives = 182/228 (79%), Gaps = 2/228 (0%)
Frame = -1
Query: 1026 RKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALNSKVFVGYSIYKGKAALT 847
R L+V+ +SD+ +++R S S + + + +VG+SIYKGKAALT
Sbjct: 51 RLKLTVKSRQSDYFEKQR-----------FGDSSSSQNAEVSSPRFYVGHSIYKGKAALT 99
Query: 846 VEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGHLMSLGA 667
+EPRAPEF L+SGA+K++KEGF+LLQFAPA G RQYDWSRKQVFSLS+ EIG+L+SLG
Sbjct: 100 IEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGP 159
Query: 666 KDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYIPISKPE 487
++SCEFFHDPFKG+ +EGK+RKVLKVEPLPDG+G FFNLSVQN+LLN+D+S+YIPI+K E
Sbjct: 160 RESCEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAE 219
Query: 486 FTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
F +L SA NF++P+L+GW +FAN+IKPE+S RLNNA ++G D+EW R
Sbjct: 220 FAVLISAFNFVLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 267
>ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding protein WHY1,
chloroplastic-like [Citrus sinensis]
Length = 267
Score = 289 bits (739), Expect = 2e-75
Identities = 141/246 (57%), Positives = 188/246 (76%), Gaps = 13/246 (5%)
Frame = -1
Query: 1047 TLALNYRRKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPP-----------GAL 901
T + + ++K L V+ +S++ +Q+ SFS P G L
Sbjct: 37 TESTSIKKKKLYVKCRQSEYYEQK---------------SFSASPSNSSYAPTDVAVGTL 81
Query: 900 NSKVFVGYSIYKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRK 721
++V+VG+SIYKGKAALTVEPR PEF LDSGA K+S+EGF++LQFAPA G RQYDWSRK
Sbjct: 82 PTRVYVGHSIYKGKAALTVEPRGPEFVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRK 141
Query: 720 QVFSLSIPEIGHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQ 541
QVFSLS+ EIG L++LGA++SCEFFHDPFKG++EEGK+RKVLKVEPLPDG+G+FFNLSVQ
Sbjct: 142 QVFSLSVTEIGSLVALGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQ 201
Query: 540 NRLLNMDDSIYIPISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGA 367
N+L+N+D+SIYIP+++ E+T+L SA NFI+PYLLGWH++A+ I+ +++ R NNA R+G
Sbjct: 202 NKLINLDESIYIPVTRAEYTVLVSAFNFILPYLLGWHAYASTIRADDTARTNNANPRYGG 261
Query: 366 DFEWGR 349
D+EW R
Sbjct: 262 DYEWNR 267
>ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
gi|557540823|gb|ESR51867.1| hypothetical protein
CICLE_v10032427mg [Citrus clementina]
Length = 267
Score = 289 bits (739), Expect = 2e-75
Identities = 141/246 (57%), Positives = 188/246 (76%), Gaps = 13/246 (5%)
Frame = -1
Query: 1047 TLALNYRRKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPP-----------GAL 901
T + + ++K L V+ +S++ +Q+ SFS P G L
Sbjct: 37 TESTSIKKKKLYVKCRQSEYYEQK---------------SFSASPSNSSYAPTDVAVGTL 81
Query: 900 NSKVFVGYSIYKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRK 721
++V+VG+SIYKGKAALTVEPR PEF LDSGA K+S+EGF++LQFAPA G RQYDWSRK
Sbjct: 82 PTRVYVGHSIYKGKAALTVEPRGPEFVSLDSGAVKLSREGFVMLQFAPAAGVRQYDWSRK 141
Query: 720 QVFSLSIPEIGHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNLSVQ 541
QVFSLS+ EIG L++LGA++SCEFFHDPFKG++EEGK+RKVLKVEPLPDG+G+FFNLSVQ
Sbjct: 142 QVFSLSVTEIGSLVALGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNLSVQ 201
Query: 540 NRLLNMDDSIYIPISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGA 367
N+L+N+D+SIYIP+++ E+T+L SA NFI+PYLLGWH++A+ I+ +++ R NNA R+G
Sbjct: 202 NKLINLDESIYIPVTRAEYTVLVSAFNFILPYLLGWHAYASTIRADDTARTNNANPRYGG 261
Query: 366 DFEWGR 349
D+EW R
Sbjct: 262 DYEWNR 267
>ref|XP_006438626.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
gi|557540822|gb|ESR51866.1| hypothetical protein
CICLE_v10032427mg [Citrus clementina]
Length = 193
Score = 288 bits (737), Expect = 3e-75
Identities = 131/189 (69%), Positives = 168/189 (88%), Gaps = 2/189 (1%)
Frame = -1
Query: 909 GALNSKVFVGYSIYKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDW 730
G L ++V+VG+SIYKGKAALTVEPR PEF LDSGA K+S+EGF++LQFAPA G RQYDW
Sbjct: 5 GTLPTRVYVGHSIYKGKAALTVEPRGPEFVSLDSGAVKLSREGFVMLQFAPAAGVRQYDW 64
Query: 729 SRKQVFSLSIPEIGHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPDGTGYFFNL 550
SRKQVFSLS+ EIG L++LGA++SCEFFHDPFKG++EEGK+RKVLKVEPLPDG+G+FFNL
Sbjct: 65 SRKQVFSLSVTEIGSLVALGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNL 124
Query: 549 SVQNRLLNMDDSIYIPISKPEFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--R 376
SVQN+L+N+D+SIYIP+++ E+T+L SA NFI+PYLLGWH++A+ I+ +++ R NNA R
Sbjct: 125 SVQNKLINLDESIYIPVTRAEYTVLVSAFNFILPYLLGWHAYASTIRADDTARTNNANPR 184
Query: 375 FGADFEWGR 349
+G D+EW R
Sbjct: 185 YGGDYEWNR 193
>ref|XP_002315793.2| hypothetical protein POPTR_0010s10260g [Populus trichocarpa]
gi|550329499|gb|EEF01964.2| hypothetical protein
POPTR_0010s10260g [Populus trichocarpa]
Length = 271
Score = 288 bits (736), Expect = 4e-75
Identities = 138/199 (69%), Positives = 169/199 (84%), Gaps = 4/199 (2%)
Frame = -1
Query: 933 TSFSRKPPGALNSKVFVGYSIYKGKAALTVEPRAPEFAPLDSGAYKVSKEGFMLLQFAPA 754
+S S P G KVFVG+SIYKGKAALT+EPRAPEF+PL+SGAYK+ KEGF+L QFAPA
Sbjct: 73 SSSSAPPVGESPPKVFVGHSIYKGKAALTIEPRAPEFSPLESGAYKLVKEGFVLSQFAPA 132
Query: 753 VGNRQYDWSRKQVFSLSIPEIGHLMSLGAKDSCEFFHDPFKGRNEEGKIRKVLKVEPLPD 574
RQYDW+RKQVFSLS+ EIGHL+SLGA+DSCEFFHDP KGR+EEGK+RKVLKVEPLPD
Sbjct: 133 SSARQYDWTRKQVFSLSVTEIGHLVSLGARDSCEFFHDPNKGRSEEGKVRKVLKVEPLPD 192
Query: 573 GTGYFFNLSVQNRLLNMDDSIYIPISKPEFTILNSALNFIVPYLLGWHSFANA--IKPEN 400
G+G+FFNLSVQN+ LN+D+SIYIP+++ E+T+L SA N+I+PYLLGWH++ANA IK +
Sbjct: 193 GSGHFFNLSVQNKALNIDESIYIPVTRAEYTVLISAFNYILPYLLGWHAYANANSIKSAD 252
Query: 399 SFRLNNA--RFGADFEWGR 349
S R NN R+G D++W R
Sbjct: 253 SSRENNVNPRYGGDYDWNR 271
>ref|XP_002875143.1| ATWHY3/PTAC11 [Arabidopsis lyrata subsp. lyrata]
gi|297320981|gb|EFH51402.1| ATWHY3/PTAC11 [Arabidopsis
lyrata subsp. lyrata]
Length = 268
Score = 285 bits (729), Expect = 3e-74
Identities = 140/229 (61%), Positives = 185/229 (80%), Gaps = 3/229 (1%)
Frame = -1
Query: 1026 RKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALNSKVFVGYSIYKGKAALT 847
R LSV+ + D+ +++R +S S+ G+ + + +VG+SIYKGKAALT
Sbjct: 51 RLKLSVKSRQDDYFEKQR----------FGDSSSSQNAEGS-SPRFYVGHSIYKGKAALT 99
Query: 846 VEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGHLMSLGA 667
+EPRAPEF L+SGA+K++KEGF+LLQFAPA G RQYDWSRKQVFSLS+ EIG+L+SLG
Sbjct: 100 IEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGP 159
Query: 666 KDSCEFFHDPFKGR-NEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYIPISKP 490
++SCEFFHDPFKG+ ++EGK+RKVLKVEPLPDG+G FFNLSVQN+LLN+D+S+YIPI+K
Sbjct: 160 RESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKA 219
Query: 489 EFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
EF +L SA NFI+P+L+GW +FAN+IKPE++ RLNNA ++G D+EW R
Sbjct: 220 EFAVLISAFNFILPHLIGWSAFANSIKPEDANRLNNASPKYGGDYEWSR 268
>ref|NP_178377.2| single-stranded DNA-binding protein WHY3 [Arabidopsis thaliana]
gi|75115367|sp|Q66GR6.1|WHY3_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY3,
chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 11; AltName: Full=Protein WHIRLY
3; Short=AtWHY3; Flags: Precursor
gi|51536442|gb|AAU05459.1| At2g02740 [Arabidopsis
thaliana] gi|51972072|gb|AAU15140.1| At2g02740
[Arabidopsis thaliana] gi|330250524|gb|AEC05618.1|
single-stranded DNA-binding protein WHY3 [Arabidopsis
thaliana]
Length = 268
Score = 285 bits (729), Expect = 3e-74
Identities = 139/229 (60%), Positives = 183/229 (79%), Gaps = 3/229 (1%)
Frame = -1
Query: 1026 RKYLSVRGHRSDFSDQRRQIGRXXXXXXXXPTSFSRKPPGALNSKVFVGYSIYKGKAALT 847
R L+V+ +SD+ +++R S S + + + +VG+SIYKGKAALT
Sbjct: 51 RLKLTVKSRQSDYFEKQR-----------FGDSSSSQNAEVSSPRFYVGHSIYKGKAALT 99
Query: 846 VEPRAPEFAPLDSGAYKVSKEGFMLLQFAPAVGNRQYDWSRKQVFSLSIPEIGHLMSLGA 667
+EPRAPEF L+SGA+K++KEGF+LLQFAPA G RQYDWSRKQVFSLS+ EIG+L+SLG
Sbjct: 100 IEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGP 159
Query: 666 KDSCEFFHDPFKGR-NEEGKIRKVLKVEPLPDGTGYFFNLSVQNRLLNMDDSIYIPISKP 490
++SCEFFHDPFKG+ ++EGK+RKVLKVEPLPDG+G FFNLSVQN+LLN+D+S+YIPI+K
Sbjct: 160 RESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKA 219
Query: 489 EFTILNSALNFIVPYLLGWHSFANAIKPENSFRLNNA--RFGADFEWGR 349
EF +L SA NF++P+L+GW +FAN+IKPE+S RLNNA ++G D+EW R
Sbjct: 220 EFAVLISAFNFVLPHLIGWSAFANSIKPEDSNRLNNASPKYGGDYEWSR 268