BLASTX nr result
ID: Zingiber25_contig00012973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00012973
(266 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001053453.1| Os04g0543200 [Oryza sativa Japonica Group] g... 86 4e-15
gb|EEE61429.1| hypothetical protein OsJ_15642 [Oryza sativa Japo... 86 4e-15
gb|EEC77732.1| hypothetical protein OsI_16837 [Oryza sativa Indi... 86 4e-15
gb|AFW59037.1| hypothetical protein ZEAMMB73_952837 [Zea mays] g... 86 5e-15
ref|NP_001136652.1| uncharacterized protein LOC100216781 [Zea ma... 86 5e-15
dbj|BAK02098.1| predicted protein [Hordeum vulgare subsp. vulgare] 84 3e-14
ref|XP_006838503.1| hypothetical protein AMTR_s00002p00175460 [A... 83 4e-14
gb|EOX96539.1| RNA-binding family protein isoform 2 [Theobroma c... 83 4e-14
gb|EOX96538.1| RNA-binding family protein isoform 1 [Theobroma c... 83 4e-14
gb|EMS63826.1| Heterogeneous nuclear ribonucleoprotein Q [Tritic... 82 6e-14
ref|XP_006583510.1| PREDICTED: nucleolin-like isoform X1 [Glycin... 82 1e-13
ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citr... 81 2e-13
ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sine... 81 2e-13
tpg|DAA36613.1| TPA: LOW QUALITY PROTEIN: water-stress protein [... 80 3e-13
tpg|DAA36610.1| TPA: hypothetical protein ZEAMMB73_089352 [Zea m... 80 3e-13
ref|NP_001105099.1| RNA recognition water-stress protein1 [Zea m... 80 3e-13
ref|XP_006653629.1| PREDICTED: nucleolin-like [Oryza brachyantha] 80 4e-13
ref|XP_003580257.1| PREDICTED: uncharacterized protein LOC100827... 80 4e-13
ref|XP_003520415.1| PREDICTED: nucleolin-like isoform X1 [Glycin... 79 5e-13
gb|EXB38373.1| Heterogeneous nuclear ribonucleoprotein Q [Morus ... 76 5e-12
>ref|NP_001053453.1| Os04g0543200 [Oryza sativa Japonica Group]
gi|38345947|emb|CAE04271.2| OSJNBb0103I08.18 [Oryza
sativa Japonica Group] gi|38345949|emb|CAE04337.2|
OSJNBb0038F03.1 [Oryza sativa Japonica Group]
gi|113565024|dbj|BAF15367.1| Os04g0543200 [Oryza sativa
Japonica Group] gi|215678877|dbj|BAG95314.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215717042|dbj|BAG95405.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 774
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+CADGI N+ +GEG +K K+RARLSRP QR R+K L G+F+ + PR G
Sbjct: 416 DTHDNAVACADGITNSEIGEGDSKAKVRARLSRPLQRPPRMKHGLRGNFRVGQGAPRGGR 475
Query: 179 VSYHQPPPTR 208
+Y +PPP R
Sbjct: 476 FAYDRPPPLR 485
>gb|EEE61429.1| hypothetical protein OsJ_15642 [Oryza sativa Japonica Group]
Length = 730
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+CADGI N+ +GEG +K K+RARLSRP QR R+K L G+F+ + PR G
Sbjct: 372 DTHDNAVACADGITNSEIGEGDSKAKVRARLSRPLQRPPRMKHGLRGNFRVGQGAPRGGR 431
Query: 179 VSYHQPPPTR 208
+Y +PPP R
Sbjct: 432 FAYDRPPPLR 441
>gb|EEC77732.1| hypothetical protein OsI_16837 [Oryza sativa Indica Group]
Length = 572
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+CADGI N+ +GEG +K K+RARLSRP QR R+K L G+F+ + PR G
Sbjct: 214 DTHDNAVACADGITNSEIGEGDSKAKVRARLSRPLQRPPRMKHGLRGNFRVGQGAPRGGR 273
Query: 179 VSYHQPPPTR 208
+Y +PPP R
Sbjct: 274 FAYDRPPPLR 283
>gb|AFW59037.1| hypothetical protein ZEAMMB73_952837 [Zea mays]
gi|413919106|gb|AFW59038.1| hypothetical protein
ZEAMMB73_952837 [Zea mays]
Length = 381
Score = 85.9 bits (211), Expect = 5e-15
Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+CA+GI+N+ +GEG +K K+RARLSRP QR R+K L G+F+ PR G
Sbjct: 24 DTHDNAVACAEGISNSEIGEGDHKAKVRARLSRPLQRPPRMKHGLRGNFRVGHGAPRGGR 83
Query: 179 VSY-HQPPPTRFSSYAYRPVGARGVP 253
+ Y PPP R RP G+R P
Sbjct: 84 LQYARAPPPRRPPPRLVRPAGSRLPP 109
>ref|NP_001136652.1| uncharacterized protein LOC100216781 [Zea mays]
gi|194696514|gb|ACF82341.1| unknown [Zea mays]
Length = 372
Score = 85.9 bits (211), Expect = 5e-15
Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+CA+GI+N+ +GEG +K K+RARLSRP QR R+K L G+F+ PR G
Sbjct: 15 DTHDNAVACAEGISNSEIGEGDHKAKVRARLSRPLQRPPRMKHGLRGNFRVGHGAPRGGR 74
Query: 179 VSY-HQPPPTRFSSYAYRPVGARGVP 253
+ Y PPP R RP G+R P
Sbjct: 75 LQYARAPPPRRPPPRLVRPAGSRLPP 100
>dbj|BAK02098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+C DGI ++ +GEG +K K+RARLSRP QR R+K L G+F+ PR G
Sbjct: 420 DTHDNAVACVDGITSSEIGEGDSKAKVRARLSRPVQRPPRMKHGLRGNFRIGHSAPRGGR 479
Query: 179 VSYHQPPPTRFSSYAYRP 232
Y +PPP R + RP
Sbjct: 480 FPYTRPPPRRPLPHLVRP 497
>ref|XP_006838503.1| hypothetical protein AMTR_s00002p00175460 [Amborella trichopoda]
gi|548841009|gb|ERN01072.1| hypothetical protein
AMTR_s00002p00175460 [Amborella trichopoda]
Length = 805
Score = 82.8 bits (203), Expect = 4e-14
Identities = 47/94 (50%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQRGRV-KRSLHGSFKSSRDFPRSGH 178
DTHD AV+C +GINN LGEG +KVK+RARLSRPHQRGRV KR G FK R R
Sbjct: 440 DTHDAAVACVEGINNAELGEGDSKVKVRARLSRPHQRGRVSKRGARGDFKVGRGGMRGAK 499
Query: 179 VSY-----HQPPPTRFSSYAYRPVGARGVPSGSR 265
+ + RF + R +G RG P SR
Sbjct: 500 APWAGRGAPRLESRRFPARVPRGLGGRGAPIPSR 533
>gb|EOX96539.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 802
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/83 (53%), Positives = 51/83 (61%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQRGRVKRSLHGSFKSSRDFPRSGHV 181
DTHD AV+CA INNT LGEG +K K+RARLSRPHQRGR K F+S R R
Sbjct: 452 DTHDAAVTCAKSINNTELGEGDSKAKVRARLSRPHQRGRGKHIGRDGFRSGRGSGRVVRG 511
Query: 182 SYHQPPPTRFSSYAYRPVGARGV 250
S+ +PPP F P G RG+
Sbjct: 512 SWGRPPPRGFP-----PRGVRGI 529
>gb|EOX96538.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508704644|gb|EOX96540.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 808
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/83 (53%), Positives = 51/83 (61%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQRGRVKRSLHGSFKSSRDFPRSGHV 181
DTHD AV+CA INNT LGEG +K K+RARLSRPHQRGR K F+S R R
Sbjct: 452 DTHDAAVTCAKSINNTELGEGDSKAKVRARLSRPHQRGRGKHIGRDGFRSGRGSGRVVRG 511
Query: 182 SYHQPPPTRFSSYAYRPVGARGV 250
S+ +PPP F P G RG+
Sbjct: 512 SWGRPPPRGFP-----PRGVRGI 529
>gb|EMS63826.1| Heterogeneous nuclear ribonucleoprotein Q [Triticum urartu]
Length = 735
Score = 82.4 bits (202), Expect = 6e-14
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+C DGI ++ +GEG +K K+RARLSRP QR R+K L G+F+ + PR G
Sbjct: 349 DTHDNAVACVDGITSSEIGEGDSKAKVRARLSRPVQRPPRMKHGLRGNFRIGQSAPRGGR 408
Query: 179 VSYHQPPPTRFSSYAYRP 232
Y +PPP R RP
Sbjct: 409 FPYTRPPPRRPLPRLVRP 426
>ref|XP_006583510.1| PREDICTED: nucleolin-like isoform X1 [Glycine max]
gi|571465910|ref|XP_006583511.1| PREDICTED:
nucleolin-like isoform X2 [Glycine max]
Length = 819
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/83 (51%), Positives = 50/83 (60%)
Frame = +2
Query: 5 THDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQRGRVKRSLHGSFKSSRDFPRSGHVS 184
THD AV CAD I T LGEG K K+RARLSRP QRGR K S G ++SSR S
Sbjct: 462 THDAAVKCADSITGTELGEGHKKAKVRARLSRPLQRGRGKHSSRGDYRSSRGSGMMTRPS 521
Query: 185 YHQPPPTRFSSYAYRPVGARGVP 253
+ +P P F S + R VG+R P
Sbjct: 522 WGRPAPHSFPSRSVRGVGSRTPP 544
>ref|XP_006445454.1| hypothetical protein CICLE_v10018944mg [Citrus clementina]
gi|567905934|ref|XP_006445455.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819727|ref|XP_006464397.1| PREDICTED: nucleolin
isoform X1 [Citrus sinensis]
gi|568819729|ref|XP_006464398.1| PREDICTED: nucleolin
isoform X2 [Citrus sinensis]
gi|568819731|ref|XP_006464399.1| PREDICTED: nucleolin
isoform X3 [Citrus sinensis] gi|557547716|gb|ESR58694.1|
hypothetical protein CICLE_v10018944mg [Citrus
clementina] gi|557547717|gb|ESR58695.1| hypothetical
protein CICLE_v10018944mg [Citrus clementina]
Length = 776
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/85 (48%), Positives = 52/85 (61%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQRGRVKRSLHGSFKSSRDFPRSGHV 181
DTHD AV+CA INN LGEG NK K+RARLSRP QRG+ K + G F+S R R+
Sbjct: 423 DTHDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRG 482
Query: 182 SYHQPPPTRFSSYAYRPVGARGVPS 256
S+ P P + R +G+R P+
Sbjct: 483 SWGLPSPRSLPGRSARGIGSRLPPA 507
>ref|NP_001275825.1| RNA recognition motif protein 1 [Citrus sinensis]
gi|567905936|ref|XP_006445456.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
gi|568819733|ref|XP_006464400.1| PREDICTED: nucleolin
isoform X4 [Citrus sinensis] gi|359386142|gb|AEV43360.1|
RNA recognition motif protein 1 [Citrus sinensis]
gi|557547718|gb|ESR58696.1| hypothetical protein
CICLE_v10018944mg [Citrus clementina]
Length = 775
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/85 (48%), Positives = 52/85 (61%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQRGRVKRSLHGSFKSSRDFPRSGHV 181
DTHD AV+CA INN LGEG NK K+RARLSRP QRG+ K + G F+S R R+
Sbjct: 423 DTHDAAVTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRGDFRSGRGTGRATRG 482
Query: 182 SYHQPPPTRFSSYAYRPVGARGVPS 256
S+ P P + R +G+R P+
Sbjct: 483 SWGLPSPRSLPGRSARGIGSRLPPA 507
>tpg|DAA36613.1| TPA: LOW QUALITY PROTEIN: water-stress protein [Zea mays]
Length = 479
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+C +G++N+ +GEG++K K+RARLSRP QR R+K L G+F+ PR G
Sbjct: 123 DTHDNAVACTEGMSNSEIGEGEHKAKVRARLSRPLQRPPRMKHGLRGNFRVGHGAPRGGR 182
Query: 179 VSYHQ-PPPTRFSSYAYRPVGAR 244
+ Y + PPP R RP +R
Sbjct: 183 LPYSRAPPPRRPPPRLIRPAVSR 205
>tpg|DAA36610.1| TPA: hypothetical protein ZEAMMB73_089352 [Zea mays]
gi|414586040|tpg|DAA36611.1| TPA: RNA recognition
water-stress protein1, mRNA isoform 2 [Zea mays]
gi|414586041|tpg|DAA36612.1| TPA: hypothetical protein
ZEAMMB73_089352 [Zea mays]
Length = 794
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+C +G++N+ +GEG++K K+RARLSRP QR R+K L G+F+ PR G
Sbjct: 438 DTHDNAVACTEGMSNSEIGEGEHKAKVRARLSRPLQRPPRMKHGLRGNFRVGHGAPRGGR 497
Query: 179 VSYHQ-PPPTRFSSYAYRPVGAR 244
+ Y + PPP R RP +R
Sbjct: 498 LPYSRAPPPRRPPPRLIRPAVSR 520
>ref|NP_001105099.1| RNA recognition water-stress protein1 [Zea mays]
gi|22655529|gb|AAN04093.1| water-stress protein [Zea
mays]
Length = 480
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+C +G++N+ +GEG++K K+RARLSRP QR R+K L G+F+ PR G
Sbjct: 124 DTHDNAVACTEGMSNSEIGEGEHKAKVRARLSRPLQRPPRMKHGLRGNFRVGHGAPRGGR 183
Query: 179 VSYHQ-PPPTRFSSYAYRPVGAR 244
+ Y + PPP R RP +R
Sbjct: 184 LPYSRAPPPRRPPPRLIRPAVSR 206
>ref|XP_006653629.1| PREDICTED: nucleolin-like [Oryza brachyantha]
Length = 786
Score = 79.7 bits (195), Expect = 4e-13
Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+CADGI+N+ +GEG +K K+RARLSRP QR R+K L G+F+ + R G
Sbjct: 428 DTHDNAVACADGISNSEIGEGDSKAKVRARLSRPLQRPPRMKHGLRGNFRIGQGASRGGR 487
Query: 179 VSYHQPPPTRFSSYAYRPVGARGVP 253
Y +PP R RP +R P
Sbjct: 488 FPYDRPPLRRPPPRLSRPDVSRLPP 512
>ref|XP_003580257.1| PREDICTED: uncharacterized protein LOC100827844 [Brachypodium
distachyon]
Length = 783
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQR-GRVKRSLHGSFKSSRDFPRSGH 178
DTHDNAV+C DGI ++ +GEG +K K+RARLSRP QR R+K L G+F+ + PR G
Sbjct: 425 DTHDNAVACVDGITSSEIGEGDSKAKVRARLSRPLQRPPRMKHGLRGNFRIGQGAPRGGR 484
Query: 179 VSYHQPPPTR 208
SY +P P R
Sbjct: 485 FSYARPLPPR 494
>ref|XP_003520415.1| PREDICTED: nucleolin-like isoform X1 [Glycine max]
gi|571445111|ref|XP_006576704.1| PREDICTED:
nucleolin-like isoform X2 [Glycine max]
Length = 816
Score = 79.3 bits (194), Expect = 5e-13
Identities = 41/83 (49%), Positives = 49/83 (59%)
Frame = +2
Query: 5 THDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQRGRVKRSLHGSFKSSRDFPRSGHVS 184
+HD AV CAD I T LGEG K K+RARLSRP QRGR K G ++SSR S
Sbjct: 459 SHDAAVKCADSITGTELGEGDKKAKVRARLSRPLQRGRGKHISRGDYRSSRGSGMMTRPS 518
Query: 185 YHQPPPTRFSSYAYRPVGARGVP 253
+ +P P F S + R VG+R P
Sbjct: 519 WSRPAPRSFPSRSVRGVGSRAPP 541
>gb|EXB38373.1| Heterogeneous nuclear ribonucleoprotein Q [Morus notabilis]
Length = 791
Score = 75.9 bits (185), Expect = 5e-12
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +2
Query: 2 DTHDNAVSCADGINNTNLGEGQNKVKIRARLSRPHQRGRVKRSLHGSFKSSRDFPRSGHV 181
DTHD AV+CA INN LGEG NK K+RARLSRP Q+G+ + G F+SSR R
Sbjct: 436 DTHDAAVTCAKSINNVELGEGGNKAKVRARLSRPLQKGKGRHVARGDFRSSRGSGRVVKG 495
Query: 182 SYHQPPPTRFSSYAYRPVGARGVP 253
S+ P P R G+R P
Sbjct: 496 SWSHPSPRSLPMRGLRGAGSRIPP 519