BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00012967
         (1079 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004976290.1| PREDICTED: ATP-dependent Clp protease proteo...   332   2e-88
ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteo...   326   1e-86
ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group] g...   323   6e-86
dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]    322   2e-85
gb|ABK26796.1| unknown [Picea sitchensis]                             322   2e-85
ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subun...   321   3e-85
gb|ACN34096.1| unknown [Zea mays] gi|414586294|tpg|DAA36865.1| T...   320   5e-85
emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group] gi...   320   8e-85
ref|NP_001150578.1| LOC100284211 [Zea mays] gi|195640324|gb|ACG3...   319   1e-84
gb|ABK23566.1| unknown [Picea sitchensis]                             312   1e-82
gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japo...   307   4e-81
gb|AFW63098.1| ATP-dependent Clp protease proteolytic subunit [Z...   301   2e-79
ref|NP_001141255.1| uncharacterized protein LOC100273342 [Zea ma...   301   2e-79
ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Sela...   301   4e-79
ref|XP_004953199.1| PREDICTED: ATP-dependent Clp protease proteo...   298   3e-78
ref|XP_002452493.1| hypothetical protein SORBIDRAFT_04g026880 [S...   298   3e-78
gb|ACG42001.1| ATP-dependent Clp protease proteolytic subunit [Z...   296   7e-78
ref|NP_001150643.1| ATP-dependent Clp protease proteolytic subun...   296   7e-78
ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selag...   296   1e-77
dbj|BAJ90210.1| predicted protein [Hordeum vulgare subsp. vulgare]    295   2e-77

>ref|XP_004976290.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Setaria italica]
          Length = 298

 Score =  332 bits (850), Expect = 2e-88
 Identities = 178/266 (66%), Positives = 202/266 (75%), Gaps = 10/266 (3%)
 Frame = +1

Query: 10  PIGINPNLNCAMLWRRLA------LSGSIIPSARRAGAGC----RSYGLIPMVIEHTSRG 159
           P  +NP+   AML RRLA       S S  P A  A A      R YGL+PMVIEHTSRG
Sbjct: 28  PNPLNPSAAAAML-RRLAAVAPRAFSSSSSPHAPPAAASGYTPRREYGLVPMVIEHTSRG 86

Query: 160 ERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAG 339
           ERAYDIFSRLLKERIVCI+GPISDDTAS+VVAQLLFLESENPAKP+HLYINSPGG VTAG
Sbjct: 87  ERAYDIFSRLLKERIVCIHGPISDDTASLVVAQLLFLESENPAKPVHLYINSPGGVVTAG 146

Query: 340 LAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYSRVMIHQPSGGASGQAT 519
           LAIYDTMQYIRSPV+TLC                  ERRALP +RVMIHQPSGGASGQA+
Sbjct: 147 LAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGASGQAS 206

Query: 520 EIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRP 699
           +IAIHAKEILKVR+RLN+IY +HTGQ I+RIE CMERDMFM P+EA ++GL+DEVI HRP
Sbjct: 207 DIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAHDWGLIDEVIEHRP 266

Query: 700 LALVTDAVPDQEASNEGTKNGNDDGS 777
           ++LV+DAV     +  G  NG + G+
Sbjct: 267 VSLVSDAVGGDPPNLGGGGNGENKGA 292


>ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Brachypodium distachyon]
          Length = 300

 Score =  326 bits (835), Expect = 1e-86
 Identities = 174/256 (67%), Positives = 196/256 (76%), Gaps = 4/256 (1%)
 Frame = +1

Query: 22  NPNLNCAMLWRRLALSGS---IIPSARRAG-AGCRSYGLIPMVIEHTSRGERAYDIFSRL 189
           NP+   AML RRLA + +      S+  AG    R YGL+PMVIEHTSRGERAYDIFSRL
Sbjct: 40  NPSAAAAML-RRLASAAAPRAFFSSSPPAGYTARREYGLVPMVIEHTSRGERAYDIFSRL 98

Query: 190 LKERIVCINGPISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDTMQYI 369
           LKERIVCI+GPI+DDTAS+VVAQLLFLESENPAKPIHLYINSPGG VTAGLAIYDTMQYI
Sbjct: 99  LKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYI 158

Query: 370 RSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYSRVMIHQPSGGASGQATEIAIHAKEIL 549
           RSPV+TLC                  ERRALP +RVMIHQPSGGASGQA++IAIHAKEIL
Sbjct: 159 RSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASDIAIHAKEIL 218

Query: 550 KVRERLNEIYVRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTDAVPD 729
           KVR+RLN+IY +HTGQ IE IE CMERDMFM P EA  +GL+DEVI HRP++LV+DAV  
Sbjct: 219 KVRDRLNKIYAKHTGQAIESIEKCMERDMFMDPVEAHSWGLIDEVIEHRPVSLVSDAVAS 278

Query: 730 QEASNEGTKNGNDDGS 777
              S  G   G + G+
Sbjct: 279 DPPSTGGAGGGENKGT 294


>ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group]
           gi|113564929|dbj|BAF15272.1| Os04g0525600 [Oryza sativa
           Japonica Group] gi|215768496|dbj|BAH00725.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 309

 Score =  323 bits (829), Expect = 6e-86
 Identities = 172/264 (65%), Positives = 198/264 (75%), Gaps = 13/264 (4%)
 Frame = +1

Query: 25  PNLNCAMLWRRLALSG------SIIPSARRAGAGC---RSYGLIPMVIEHTSRGERAYDI 177
           PN + A + RRLA +       S  P A    AG    R YGL+PMVIEHTSRGERAYDI
Sbjct: 44  PNPSPAAMLRRLAAAAPRAFFSSSTPHAPPPPAGYTQRREYGLVPMVIEHTSRGERAYDI 103

Query: 178 FSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDT 357
           FSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAKP+HLYINSPGG VTAGLAIYDT
Sbjct: 104 FSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYINSPGGVVTAGLAIYDT 163

Query: 358 MQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYSRVMIHQPSGGASGQATEIAIHA 537
           MQYIRSPV+TLC                  ERRALP +RVMIHQPSGGASGQA++IAIHA
Sbjct: 164 MQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQPSGGASGQASDIAIHA 223

Query: 538 KEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTD 717
           KEILKVR+RLN+IY +HT Q I+RIE CMERDMFM P+EA ++GL+DEVI HRP++LV+D
Sbjct: 224 KEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGLIDEVIEHRPVSLVSD 283

Query: 718 AV----PDQEASNEGTKNGNDDGS 777
           AV    P+     +G     D+ S
Sbjct: 284 AVGSDLPNLGGGGDGANKATDEPS 307


>dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 256

 Score =  322 bits (825), Expect = 2e-85
 Identities = 168/250 (67%), Positives = 191/250 (76%), Gaps = 4/250 (1%)
 Frame = +1

Query: 52  RRLALSGS----IIPSARRAGAGCRSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCING 219
           RRLA + +      PS     A  R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+G
Sbjct: 3   RRLASAAAPRAFFSPSPAAGHAPRREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHG 62

Query: 220 PISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXX 399
           PI+DDTAS+VVAQLLFLESENPAKPIHLYINSPGG VTAGLAIYDTMQYIRSPV+TLC  
Sbjct: 63  PIADDTASLVVAQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIG 122

Query: 400 XXXXXXXXXXXXXXXXERRALPYSRVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIY 579
                           ERRALP +RVMIHQPSGGASGQA++IAI AKEILKVR+RLN+IY
Sbjct: 123 QAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASDIAIQAKEILKVRDRLNKIY 182

Query: 580 VRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTKN 759
            +HTGQ I+RIE CMERDMFM P EA  +GL+DEVI HRP++LV+DAV     +  G  +
Sbjct: 183 AKHTGQAIDRIEQCMERDMFMDPVEAHAWGLIDEVIEHRPISLVSDAVSSDPPNVSGGGS 242

Query: 760 GNDDGSGGKE 789
           G  +  G +E
Sbjct: 243 GGGESKGTEE 252


>gb|ABK26796.1| unknown [Picea sitchensis]
          Length = 248

 Score =  322 bits (824), Expect = 2e-85
 Identities = 160/212 (75%), Positives = 180/212 (84%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           RSYGLIPMVIEHTSRGERAYDIFSRLLKERI+CINGPI+D+TASVVVAQLLFLESENP K
Sbjct: 33  RSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQK 92

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           PI++YINSPGG VTAGLAIYDTMQYI+SPV+TLC                  ERRALP +
Sbjct: 93  PINMYINSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPNA 152

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGASGQA++IAIHAKEILK RERLN +Y +HTGQ IE+IE  MERD FMSPD
Sbjct: 153 RVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMERDTFMSPD 212

Query: 652 EAKEFGLVDEVITHRPLALVTDAVPDQEASNE 747
           EAKEFGL+DEVI HRP++LVTD+V D + +N+
Sbjct: 213 EAKEFGLIDEVIEHRPISLVTDSVTDDKKNNK 244


>ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
           gi|194700894|gb|ACF84531.1| unknown [Zea mays]
           gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
           gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease
           proteolytic subunit isoform 1 [Zea mays]
           gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease
           proteolytic subunit isoform 2 [Zea mays]
          Length = 260

 Score =  321 bits (823), Expect = 3e-85
 Identities = 162/226 (71%), Positives = 183/226 (80%), Gaps = 4/226 (1%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAK
Sbjct: 33  REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 92

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIRSPV+TLC                  ERRALP +
Sbjct: 93  PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNA 152

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGASGQA++IAIHAKEILKVR+RLN+IY +HTGQ I+RIE CMERDMFM P+
Sbjct: 153 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPE 212

Query: 652 EAKEFGLVDEVITHRPLALVTDAV----PDQEASNEGTKNGNDDGS 777
           EA E+GL+DEVI HRP++LV+DAV    P+          G D+ S
Sbjct: 213 EAHEWGLIDEVIEHRPVSLVSDAVGSDPPNLGGGGTEVNKGTDEPS 258


>gb|ACN34096.1| unknown [Zea mays] gi|414586294|tpg|DAA36865.1| TPA: ATP-dependent
           Clp protease proteolytic subunit [Zea mays]
          Length = 259

 Score =  320 bits (821), Expect = 5e-85
 Identities = 160/222 (72%), Positives = 183/222 (82%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAK
Sbjct: 32  REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 91

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIRSPV+TLC                  ERRALP +
Sbjct: 92  PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNA 151

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGASGQA++IAIHAKEILKVR+RLN+IY +HTGQ I+RIE CMERDMFM P+
Sbjct: 152 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPE 211

Query: 652 EAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTKNGNDDGS 777
           EA ++GL+DEVI HRP++LV+DAV     +  G   G + G+
Sbjct: 212 EAHDWGLIDEVIEHRPVSLVSDAVGSDSQNLGGGGAGVNKGA 253


>emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group]
           gi|116310954|emb|CAH67891.1|
           OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa Indica
           Group] gi|125549084|gb|EAY94906.1| hypothetical protein
           OsI_16707 [Oryza sativa Indica Group]
          Length = 259

 Score =  320 bits (819), Expect = 8e-85
 Identities = 160/226 (70%), Positives = 183/226 (80%), Gaps = 4/226 (1%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAK
Sbjct: 32  REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 91

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIRSPV+TLC                  ERRALP +
Sbjct: 92  PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNA 151

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGASGQA++IAIHAKEILKVR+RLN+IY +HT Q I+RIE CMERDMFM P+
Sbjct: 152 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPE 211

Query: 652 EAKEFGLVDEVITHRPLALVTDAV----PDQEASNEGTKNGNDDGS 777
           EA ++GL+DEVI HRP++LV+DAV    P+     +G     D+ S
Sbjct: 212 EAHDWGLIDEVIEHRPVSLVSDAVGSDLPNLGGGGDGANKATDEPS 257


>ref|NP_001150578.1| LOC100284211 [Zea mays] gi|195640324|gb|ACG39630.1| ATP-dependent
           Clp protease proteolytic subunit [Zea mays]
          Length = 260

 Score =  319 bits (818), Expect = 1e-84
 Identities = 159/222 (71%), Positives = 183/222 (82%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAK
Sbjct: 33  REYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAK 92

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIRSPV+TLC                  +RRALP +
Sbjct: 93  PVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGQRRALPNA 152

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGASGQA++IAIHAKEILKVR+RLN+IY +HTGQ I+RIE CMERDMFM P+
Sbjct: 153 RVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPE 212

Query: 652 EAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTKNGNDDGS 777
           EA ++GL+DEVI HRP++LV+DAV     +  G   G + G+
Sbjct: 213 EAHDWGLIDEVIEHRPVSLVSDAVGSDSQNLGGGGAGVNKGA 254


>gb|ABK23566.1| unknown [Picea sitchensis]
          Length = 243

 Score =  312 bits (800), Expect = 1e-82
 Identities = 158/212 (74%), Positives = 174/212 (82%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           RSYGLIPMVIE TSRGERAYDIFSRLLKERI+CING I DDTA+VVVAQLLFLESENPAK
Sbjct: 29  RSYGLIPMVIEQTSRGERAYDIFSRLLKERIICINGVIEDDTAAVVVAQLLFLESENPAK 88

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           PI+LYINSPGG VTAGLAIYDTMQYIRSPVST C                  ERR+LP +
Sbjct: 89  PINLYINSPGGVVTAGLAIYDTMQYIRSPVSTFCMGQAASMGSLLLAAGAKGERRSLPNA 148

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           R+MIHQPSGGASGQA++IAI AKEIL  R+RLN +Y +HTGQ I++IE CMERDMFMSP+
Sbjct: 149 RIMIHQPSGGASGQASDIAIQAKEILLTRDRLNSLYAKHTGQSIDKIEKCMERDMFMSPE 208

Query: 652 EAKEFGLVDEVITHRPLALVTDAVPDQEASNE 747
           EAKEFGLVD VI  RP++LVTDAV D  A NE
Sbjct: 209 EAKEFGLVDTVIEQRPMSLVTDAVGDASADNE 240


>gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japonica Group]
          Length = 221

 Score =  307 bits (787), Expect = 4e-81
 Identities = 155/219 (70%), Positives = 177/219 (80%), Gaps = 4/219 (1%)
 Frame = +1

Query: 133 MVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAKPIHLYIN 312
           MVIEHTSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENPAKP+HLYIN
Sbjct: 1   MVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYIN 60

Query: 313 SPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYSRVMIHQP 492
           SPGG VTAGLAIYDTMQYIRSPV+TLC                  ERRALP +RVMIHQP
Sbjct: 61  SPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQP 120

Query: 493 SGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPDEAKEFGL 672
           SGGASGQA++IAIHAKEILKVR+RLN+IY +HT Q I+RIE CMERDMFM P+EA ++GL
Sbjct: 121 SGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGL 180

Query: 673 VDEVITHRPLALVTDAV----PDQEASNEGTKNGNDDGS 777
           +DEVI HRP++LV+DAV    P+     +G     D+ S
Sbjct: 181 IDEVIEHRPVSLVSDAVGSDLPNLGGGGDGANKATDEPS 219


>gb|AFW63098.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
          Length = 395

 Score =  301 bits (772), Expect = 2e-79
 Identities = 148/204 (72%), Positives = 170/204 (83%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCINGPI+DDTAS+VVAQLLFLESENP K
Sbjct: 164 REYGLVPMVIETTSRGERAYDIFSRLLKERIVCINGPIADDTASLVVAQLLFLESENPLK 223

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                  ERRALP +
Sbjct: 224 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 283

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM PD
Sbjct: 284 RVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPD 343

Query: 652 EAKEFGLVDEVITHRPLALVTDAV 723
           EA+++GL+DEVI +RP +L+ D +
Sbjct: 344 EARDWGLIDEVIENRPASLMPDGI 367


>ref|NP_001141255.1| uncharacterized protein LOC100273342 [Zea mays]
           gi|194703568|gb|ACF85868.1| unknown [Zea mays]
          Length = 304

 Score =  301 bits (772), Expect = 2e-79
 Identities = 148/204 (72%), Positives = 170/204 (83%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCINGPI+DDTAS+VVAQLLFLESENP K
Sbjct: 73  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCINGPIADDTASLVVAQLLFLESENPLK 132

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                  ERRALP +
Sbjct: 133 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 192

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM PD
Sbjct: 193 RVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPD 252

Query: 652 EAKEFGLVDEVITHRPLALVTDAV 723
           EA+++GL+DEVI +RP +L+ D +
Sbjct: 253 EARDWGLIDEVIENRPASLMPDGI 276


>ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
           gi|300141641|gb|EFJ08350.1| hypothetical protein
           SELMODRAFT_131898 [Selaginella moellendorffii]
          Length = 253

 Score =  301 bits (770), Expect = 4e-79
 Identities = 158/242 (65%), Positives = 184/242 (76%), Gaps = 3/242 (1%)
 Frame = +1

Query: 46  LWR---RLALSGSIIPSARRAGAGCRSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCIN 216
           LWR   R ALS   +   +R     R YGLIPMVIEHT+RGERAYDIFSRLLKERIVCI+
Sbjct: 5   LWRHAARCALSPPALDHHQR-----RLYGLIPMVIEHTARGERAYDIFSRLLKERIVCIH 59

Query: 217 GPISDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCX 396
           GPI+DDTAS+VVAQLL+LESENP KPIHLYINSPGG VTAGLAIYDTMQYIRSPVSTLC 
Sbjct: 60  GPIADDTASLVVAQLLYLESENPLKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTLCV 119

Query: 397 XXXXXXXXXXXXXXXXXERRALPYSRVMIHQPSGGASGQATEIAIHAKEILKVRERLNEI 576
                            +RR+LP +RVM+HQPSGGASGQA++IAI A+EIL +R RLN++
Sbjct: 120 GQAASMGSLLLAAGEPGQRRSLPNARVMVHQPSGGASGQASDIAIQAREILDMRSRLNKL 179

Query: 577 YVRHTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTK 756
           Y +HTG  IE+I+  MERD FMSP+EAKEFGL+DEVI  RP +LV D+V  + A+  G  
Sbjct: 180 YAKHTGSSIEKIDQSMERDHFMSPEEAKEFGLIDEVIVQRPESLVADSVGVKAAAEGGGA 239

Query: 757 NG 762
            G
Sbjct: 240 GG 241


>ref|XP_004953199.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Setaria italica]
          Length = 304

 Score =  298 bits (763), Expect = 3e-78
 Identities = 146/204 (71%), Positives = 171/204 (83%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENP K
Sbjct: 73  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLK 132

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                  ERRALP +
Sbjct: 133 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 192

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM P+
Sbjct: 193 RVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPE 252

Query: 652 EAKEFGLVDEVITHRPLALVTDAV 723
           EA+++GL+DEVI +RP +L+T+ +
Sbjct: 253 EARDWGLIDEVIENRPASLMTEGL 276


>ref|XP_002452493.1| hypothetical protein SORBIDRAFT_04g026880 [Sorghum bicolor]
           gi|241932324|gb|EES05469.1| hypothetical protein
           SORBIDRAFT_04g026880 [Sorghum bicolor]
          Length = 309

 Score =  298 bits (763), Expect = 3e-78
 Identities = 146/204 (71%), Positives = 170/204 (83%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENP K
Sbjct: 80  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLK 139

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                  ERRALP +
Sbjct: 140 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 199

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM P+
Sbjct: 200 RVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPE 259

Query: 652 EAKEFGLVDEVITHRPLALVTDAV 723
           EA+++GL+DEVI +RP +L+ D +
Sbjct: 260 EARDWGLIDEVIENRPASLMPDGI 283


>gb|ACG42001.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
          Length = 302

 Score =  296 bits (759), Expect = 7e-78
 Identities = 145/204 (71%), Positives = 169/204 (82%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENP K
Sbjct: 73  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLK 132

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                  ERRALP +
Sbjct: 133 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 192

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM P+
Sbjct: 193 RVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPE 252

Query: 652 EAKEFGLVDEVITHRPLALVTDAV 723
           EA+++GL+DEVI +RP + + D +
Sbjct: 253 EARDWGLIDEVIENRPASFMPDVI 276


>ref|NP_001150643.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
           gi|195640820|gb|ACG39878.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
           gi|413937908|gb|AFW72459.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
          Length = 302

 Score =  296 bits (759), Expect = 7e-78
 Identities = 145/204 (71%), Positives = 169/204 (82%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGL+PMVIE TSRGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLLFLESENP K
Sbjct: 73  REYGLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLK 132

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           P+HLYINSPGG VTAGLAIYDTMQYIR PV+TLC                  ERRALP +
Sbjct: 133 PVHLYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNA 192

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +HT QPI++IE CMERD+FM P+
Sbjct: 193 RVMIHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPE 252

Query: 652 EAKEFGLVDEVITHRPLALVTDAV 723
           EA+++GL+DEVI +RP + + D +
Sbjct: 253 EARDWGLIDEVIENRPASFMPDGI 276


>ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
           gi|300148617|gb|EFJ15276.1| hypothetical protein
           SELMODRAFT_48156 [Selaginella moellendorffii]
          Length = 206

 Score =  296 bits (757), Expect = 1e-77
 Identities = 147/204 (72%), Positives = 169/204 (82%)
 Frame = +1

Query: 112 RSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPISDDTASVVVAQLLFLESENPAK 291
           R YGLIPMVIEHT+RGERAYDIFSRLLKERIVCI+GPI+DDTAS+VVAQLL+LESENP K
Sbjct: 2   RLYGLIPMVIEHTARGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLYLESENPLK 61

Query: 292 PIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXXXXXXXXXXXXXXXXERRALPYS 471
           PIHLYINSPGG VTAGLAIYDTMQYIRSPVSTLC                  +RR+LP +
Sbjct: 62  PIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQRRSLPNA 121

Query: 472 RVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVRHTGQPIERIEHCMERDMFMSPD 651
           RVM+HQPSGGASGQA++IAI A+EIL +R RLN++Y +HTG  IE+I+  MERD FMSP+
Sbjct: 122 RVMVHQPSGGASGQASDIAIQAREILDMRSRLNKLYAKHTGSSIEKIDQSMERDHFMSPE 181

Query: 652 EAKEFGLVDEVITHRPLALVTDAV 723
           EAKEFGL+DEVI  RP +LV D+V
Sbjct: 182 EAKEFGLIDEVIVQRPESLVADSV 205


>dbj|BAJ90210.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 285

 Score =  295 bits (756), Expect = 2e-77
 Identities = 153/245 (62%), Positives = 184/245 (75%), Gaps = 2/245 (0%)
 Frame = +1

Query: 52  RRLAL--SGSIIPSARRAGAGCRSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCINGPI 225
           RRLA+  S    P      +  R YGL+PMV+E TSRGERAYDIFSRLLKERIVCI+GPI
Sbjct: 31  RRLAVFSSAPYQPPEPEGYSSVREYGLVPMVVETTSRGERAYDIFSRLLKERIVCIHGPI 90

Query: 226 SDDTASVVVAQLLFLESENPAKPIHLYINSPGGAVTAGLAIYDTMQYIRSPVSTLCXXXX 405
           +D+TAS+VVAQLLFLESENP KPI LYINSPGG VTAGLAIYDTMQYIR PV+T+C    
Sbjct: 91  ADETASLVVAQLLFLESENPLKPISLYINSPGGVVTAGLAIYDTMQYIRCPVNTICIGQA 150

Query: 406 XXXXXXXXXXXXXXERRALPYSRVMIHQPSGGASGQATEIAIHAKEILKVRERLNEIYVR 585
                         ERRALP +RVMIHQPSGGA GQAT+IAI AKEILK+R+RLN+IY +
Sbjct: 151 ASMGSLLLAAGARGERRALPNARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYAK 210

Query: 586 HTGQPIERIEHCMERDMFMSPDEAKEFGLVDEVITHRPLALVTDAVPDQEASNEGTKNGN 765
           HTGQ I++IE CMERD+FM P+EA+E+GL+DEVI +RP +L+ + +   +  + G   G 
Sbjct: 211 HTGQNIDKIEQCMERDLFMDPEEAREWGLIDEVIENRPASLMPEGLSAVDPPHHG-GGGG 269

Query: 766 DDGSG 780
            +G G
Sbjct: 270 PNGRG 274