BLASTX nr result
ID: Zingiber25_contig00012778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00012778
(472 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II tra... 91 2e-16
ref|XP_006385271.1| hypothetical protein POPTR_0003s02320g [Popu... 90 3e-16
ref|XP_002332445.1| predicted protein [Populus trichocarpa] 90 3e-16
ref|XP_002298205.2| hypothetical protein POPTR_0001s21210g [Popu... 89 5e-16
ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago ... 89 8e-16
ref|XP_004974264.1| PREDICTED: mediator of RNA polymerase II tra... 88 1e-15
ref|XP_004974263.1| PREDICTED: mediator of RNA polymerase II tra... 88 1e-15
ref|XP_004974262.1| PREDICTED: mediator of RNA polymerase II tra... 88 1e-15
ref|XP_004974261.1| PREDICTED: mediator of RNA polymerase II tra... 88 1e-15
ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra... 88 1e-15
ref|XP_002332876.1| predicted protein [Populus trichocarpa] 88 1e-15
ref|XP_006389371.1| hypothetical protein POPTR_0027s00430g [Popu... 88 1e-15
ref|XP_006389370.1| hypothetical protein POPTR_0027s00430g [Popu... 88 1e-15
ref|XP_006389369.1| hypothetical protein POPTR_0027s00430g [Popu... 88 1e-15
gb|EOY25953.1| Uncharacterized protein TCM_027312 [Theobroma cacao] 88 1e-15
ref|XP_006660397.1| PREDICTED: mediator of RNA polymerase II tra... 87 2e-15
tpg|DAA48539.1| TPA: hypothetical protein ZEAMMB73_618405 [Zea m... 87 2e-15
ref|XP_006389363.1| hypothetical protein POPTR_0027s00370g [Popu... 87 3e-15
ref|XP_004506980.1| PREDICTED: mediator of RNA polymerase II tra... 87 3e-15
gb|EMJ09915.1| hypothetical protein PRUPE_ppa023324mg, partial [... 87 3e-15
>ref|XP_004486632.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like [Cicer arietinum]
Length = 1313
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/77 (57%), Positives = 58/77 (75%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP+Q A P+ S+DWR QLQP++R+R+ NKIMD LKRHLP+ EGL+EL+
Sbjct: 1 MDSNNWRPNQ---GAEPNMDSSDWRGQLQPESRQRVVNKIMDTLKRHLPVSGQEGLLELR 57
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA RFEEKI+ A +Q
Sbjct: 58 KIAQRFEEKIFTAATSQ 74
>ref|XP_006385271.1| hypothetical protein POPTR_0003s02320g [Populus trichocarpa]
gi|550342211|gb|ERP63068.1| hypothetical protein
POPTR_0003s02320g [Populus trichocarpa]
Length = 1293
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP P P + DWR QLQPD+R+RI NKIM+ LKRHLP EGL EL+
Sbjct: 1 MDANNWRPTA--PGGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELK 58
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA+RFEEKIY A NQ
Sbjct: 59 KIAVRFEEKIYTAATNQ 75
>ref|XP_002332445.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 90.1 bits (222), Expect = 3e-16
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP P P + DWR QLQPD+R+RI NKIM+ LKRHLP EGL EL+
Sbjct: 1 MDANNWRPTA--PGGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELK 58
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA+RFEEKIY A NQ
Sbjct: 59 KIAVRFEEKIYTAATNQ 75
>ref|XP_002298205.2| hypothetical protein POPTR_0001s21210g [Populus trichocarpa]
gi|550347800|gb|EEE83010.2| hypothetical protein
POPTR_0001s21210g [Populus trichocarpa]
Length = 540
Score = 89.4 bits (220), Expect = 5e-16
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP P P + DWR QLQPDAR+RI NKIM+ LKRHLP EGL EL+
Sbjct: 1 MDANNWRPTA--PGGEPVMDTGDWRTQLQPDARQRIVNKIMETLKRHLPFSGQEGLQELK 58
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA+RFEEKIY A +Q
Sbjct: 59 KIAVRFEEKIYTAATSQ 75
>ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago truncatula]
gi|355487003|gb|AES68206.1| hypothetical protein
MTR_2g104400 [Medicago truncatula]
Length = 1289
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/77 (58%), Positives = 57/77 (74%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP+Q A P+ ++DWR QLQP++R+RI NKIMD LKRHLP+ EGL EL+
Sbjct: 1 MDTNNWRPNQ---GAEPNMDTSDWRGQLQPESRQRIVNKIMDTLKRHLPVSGQEGLHELR 57
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA RFEEKIY A +Q
Sbjct: 58 KIAQRFEEKIYTAATSQ 74
>ref|XP_004974264.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X4 [Setaria italica]
Length = 1328
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/64 (67%), Positives = 49/64 (76%)
Frame = +2
Query: 281 SAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQKIAIRFEEKIYAE 460
+A P G DWR QLQP+AR RI NKIM+ LK+HLP+ PEGL ELQKIA+RFEEKIY
Sbjct: 28 AAAPAGG--DWRTQLQPEARSRIVNKIMETLKKHLPVSVPEGLSELQKIAVRFEEKIYTA 85
Query: 461 AANQ 472
A NQ
Sbjct: 86 ATNQ 89
>ref|XP_004974263.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X3 [Setaria italica]
Length = 1329
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/64 (67%), Positives = 49/64 (76%)
Frame = +2
Query: 281 SAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQKIAIRFEEKIYAE 460
+A P G DWR QLQP+AR RI NKIM+ LK+HLP+ PEGL ELQKIA+RFEEKIY
Sbjct: 28 AAAPAGG--DWRTQLQPEARSRIVNKIMETLKKHLPVSVPEGLSELQKIAVRFEEKIYTA 85
Query: 461 AANQ 472
A NQ
Sbjct: 86 ATNQ 89
>ref|XP_004974262.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X2 [Setaria italica]
Length = 1361
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/64 (67%), Positives = 49/64 (76%)
Frame = +2
Query: 281 SAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQKIAIRFEEKIYAE 460
+A P G DWR QLQP+AR RI NKIM+ LK+HLP+ PEGL ELQKIA+RFEEKIY
Sbjct: 28 AAAPAGG--DWRTQLQPEARSRIVNKIMETLKKHLPVSVPEGLSELQKIAVRFEEKIYTA 85
Query: 461 AANQ 472
A NQ
Sbjct: 86 ATNQ 89
>ref|XP_004974261.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X1 [Setaria italica]
Length = 1362
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/64 (67%), Positives = 49/64 (76%)
Frame = +2
Query: 281 SAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQKIAIRFEEKIYAE 460
+A P G DWR QLQP+AR RI NKIM+ LK+HLP+ PEGL ELQKIA+RFEEKIY
Sbjct: 28 AAAPAGG--DWRTQLQPEARSRIVNKIMETLKKHLPVSVPEGLSELQKIAVRFEEKIYTA 85
Query: 461 AANQ 472
A NQ
Sbjct: 86 ATNQ 89
>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like, partial [Cucumis sativus]
Length = 589
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP Q + P + DWR QLQPD+R+RI NKIM+ LKRHLP+ EGL EL+
Sbjct: 1 MDNNNWRPTQ---AVEPGMETVDWRSQLQPDSRQRIVNKIMETLKRHLPVSGQEGLSELR 57
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA+RFEEKI+ A +Q
Sbjct: 58 KIAVRFEEKIFTAATSQ 74
>ref|XP_002332876.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/77 (55%), Positives = 54/77 (70%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP P P + DWRIQLQPD+R+RI +KI+++LKRHLP EGL EL+
Sbjct: 1 MDANNWRPTA--PGGEPVIDTGDWRIQLQPDSRKRIVDKIIEILKRHLPFSGQEGLQELK 58
Query: 422 KIAIRFEEKIYAEAANQ 472
KI +RFEEKIY A NQ
Sbjct: 59 KIVVRFEEKIYTAATNQ 75
>ref|XP_006389371.1| hypothetical protein POPTR_0027s00430g [Populus trichocarpa]
gi|550312142|gb|ERP48285.1| hypothetical protein
POPTR_0027s00430g [Populus trichocarpa]
Length = 981
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP V D + DWR QLQPD+R+RI NKIM+ LKRHLP EGL EL+
Sbjct: 1 MDANNRRPTALGGEPVMD--TGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELK 58
Query: 422 KIAIRFEEKIYAEAANQ 472
K+A+RFEEKIY A NQ
Sbjct: 59 KVAVRFEEKIYTAATNQ 75
>ref|XP_006389370.1| hypothetical protein POPTR_0027s00430g [Populus trichocarpa]
gi|550312141|gb|ERP48284.1| hypothetical protein
POPTR_0027s00430g [Populus trichocarpa]
Length = 942
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP V D + DWR QLQPD+R+RI NKIM+ LKRHLP EGL EL+
Sbjct: 1 MDANNRRPTALGGEPVMD--TGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELK 58
Query: 422 KIAIRFEEKIYAEAANQ 472
K+A+RFEEKIY A NQ
Sbjct: 59 KVAVRFEEKIYTAATNQ 75
>ref|XP_006389369.1| hypothetical protein POPTR_0027s00430g [Populus trichocarpa]
gi|550312140|gb|ERP48283.1| hypothetical protein
POPTR_0027s00430g [Populus trichocarpa]
Length = 874
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP V D + DWR QLQPD+R+RI NKIM+ LKRHLP EGL EL+
Sbjct: 1 MDANNRRPTALGGEPVMD--TGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELK 58
Query: 422 KIAIRFEEKIYAEAANQ 472
K+A+RFEEKIY A NQ
Sbjct: 59 KVAVRFEEKIYTAATNQ 75
>gb|EOY25953.1| Uncharacterized protein TCM_027312 [Theobroma cacao]
Length = 1367
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP PS P + DWR QLQ D+R+RI NKIMD LKRHLP EGL EL+
Sbjct: 1 MDNNNWRPTP--PSGEPTMDTGDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLNELR 58
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA+RFEEKI+ A++Q
Sbjct: 59 KIAVRFEEKIFTAASSQ 75
>ref|XP_006660397.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like, partial [Oryza brachyantha]
Length = 1297
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = +2
Query: 290 PDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQKIAIRFEEKIYAEAAN 469
P S DWR QLQP+AR RI NKIM+ LK+HLP+ PEGL ELQKIA+RFEEKIY A +
Sbjct: 1 PAPSGGDWRAQLQPEARTRIVNKIMETLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATS 60
Query: 470 Q 472
Q
Sbjct: 61 Q 61
>tpg|DAA48539.1| TPA: hypothetical protein ZEAMMB73_618405 [Zea mays]
Length = 540
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/64 (65%), Positives = 50/64 (78%)
Frame = +2
Query: 281 SAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQKIAIRFEEKIYAE 460
+A P GS DWR QLQP+AR+RI NKIM+ LK+HLP+ PEGL EL KIA+RFEEKIY
Sbjct: 28 AAAPTGS--DWRTQLQPEARQRIVNKIMETLKKHLPVSVPEGLTELHKIAVRFEEKIYTA 85
Query: 461 AANQ 472
A +Q
Sbjct: 86 ATSQ 89
>ref|XP_006389363.1| hypothetical protein POPTR_0027s00370g [Populus trichocarpa]
gi|550312134|gb|ERP48277.1| hypothetical protein
POPTR_0027s00370g [Populus trichocarpa]
Length = 1005
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/65 (63%), Positives = 47/65 (72%)
Frame = +2
Query: 278 PSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQKIAIRFEEKIYA 457
P P + DWR QLQPD+R+RI NKIM+ LKRHLP EGL EL+KIA+RFEEKIY
Sbjct: 11 PGGEPVMDTGDWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGLQELKKIAVRFEEKIYT 70
Query: 458 EAANQ 472
A NQ
Sbjct: 71 AATNQ 75
>ref|XP_004506980.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like [Cicer arietinum]
Length = 1503
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP+ P P +++WR QLQPD+R+RI NKIMD LK+HLP+ EGL+EL
Sbjct: 120 MDSNNWRPN---PGTEPTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVSGSEGLLELW 176
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA RFEEKI+ A +Q
Sbjct: 177 KIAQRFEEKIFTAATSQ 193
Score = 86.7 bits (213), Expect = 3e-15
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP+ P P +++WR QLQPD+R+RI NKIMD LK+HLP+ EGL+EL
Sbjct: 239 MDSNNWRPN---PGTEPTIDTSEWRAQLQPDSRQRIVNKIMDTLKKHLPVSGSEGLLELW 295
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA RFEEKI+ A +Q
Sbjct: 296 KIAQRFEEKIFTAATSQ 312
Score = 84.3 bits (207), Expect = 1e-14
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP+ P P +++WR QLQPD+R+RI NKIMD K+HLP+ EGL+EL
Sbjct: 1 MDSNNWRPN---PGTEPTIDTSEWRAQLQPDSRQRIVNKIMDTSKKHLPVSGSEGLLELW 57
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA RFEEKI+ A +Q
Sbjct: 58 KIAQRFEEKIFTAATSQ 74
>gb|EMJ09915.1| hypothetical protein PRUPE_ppa023324mg, partial [Prunus persica]
Length = 634
Score = 86.7 bits (213), Expect = 3e-15
Identities = 45/77 (58%), Positives = 54/77 (70%)
Frame = +2
Query: 242 MEGNSGRPDQRKPSAVPDGSSADWRIQLQPDARRRIANKIMDVLKRHLPIHSPEGLIELQ 421
M+ N+ RP Q + + G DWR QLQPD+R+RI NKIMD LKRHLP EGL EL+
Sbjct: 1 MDTNNWRPPQVGEAPMDAG---DWRSQLQPDSRQRIVNKIMDTLKRHLPFSGHEGLQELK 57
Query: 422 KIAIRFEEKIYAEAANQ 472
KIA+RFEEKIY A +Q
Sbjct: 58 KIAVRFEEKIYTAATSQ 74