BLASTX nr result

ID: Zingiber25_contig00012557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00012557
         (262 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ90258.1| predicted protein [Hordeum vulgare subsp. vulgar...    62   8e-08
ref|XP_006661749.1| PREDICTED: delta(24)-sterol reductase-like i...    57   2e-06
gb|EMT16029.1| Cell elongation protein DIMINUTO [Aegilops tauschii]    56   4e-06
gb|EMS57493.1| Delta(24)-sterol reductase [Triticum urartu]            56   4e-06
dbj|BAJ89089.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06
gb|AAM01136.1|AC108884_18 Putative Cell elongation protein DIMIN...    56   6e-06

>dbj|BAJ90258.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|552350601|gb|AGY46368.1| Delta24(25)-sterol reductase
           [Hordeum vulgare subsp. vulgare]
          Length = 607

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
 Frame = -3

Query: 176 YISFRFTSPSPKTIG--RLLAPPSSASRCKMSDLQQPLVRPKRKKVLVDYLVQLRWIVVI 3
           +ISF  +S S  T G  R   PP+      M+DLQ PLVRPKRKKVLVDYLVQ RWI+VI
Sbjct: 23  FISFHSSSSSSGTTGKKRRSQPPA------MADLQTPLVRPKRKKVLVDYLVQFRWILVI 76


>ref|XP_006661749.1| PREDICTED: delta(24)-sterol reductase-like isoform X1 [Oryza
          brachyantha] gi|573959104|ref|XP_006661750.1|
          PREDICTED: delta(24)-sterol reductase-like isoform X2
          [Oryza brachyantha]
          Length = 561

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -3

Query: 92 MSDLQQPLVRPKRKKVLVDYLVQLRWIVVI 3
          M+DLQ+PLVRPKRKKVLVDYLVQ RWI+VI
Sbjct: 1  MADLQEPLVRPKRKKVLVDYLVQFRWILVI 30


>gb|EMT16029.1| Cell elongation protein DIMINUTO [Aegilops tauschii]
          Length = 561

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 92 MSDLQQPLVRPKRKKVLVDYLVQLRWIVVI 3
          M+DLQ PLVRPKRKKVLVDYLVQ RWI+VI
Sbjct: 1  MADLQTPLVRPKRKKVLVDYLVQFRWILVI 30


>gb|EMS57493.1| Delta(24)-sterol reductase [Triticum urartu]
          Length = 488

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 92 MSDLQQPLVRPKRKKVLVDYLVQLRWIVVI 3
          M+DLQ PLVRPKRKKVLVDYLVQ RWI+VI
Sbjct: 1  MADLQTPLVRPKRKKVLVDYLVQFRWILVI 30


>dbj|BAJ89089.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 561

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 92 MSDLQQPLVRPKRKKVLVDYLVQLRWIVVI 3
          M+DLQ PLVRPKRKKVLVDYLVQ RWI+VI
Sbjct: 1  MADLQTPLVRPKRKKVLVDYLVQFRWILVI 30


>gb|AAM01136.1|AC108884_18 Putative Cell elongation protein DIMINUTO (Cell elongation
          protein Dwarf1) [Oryza sativa Japonica Group]
          gi|31431903|gb|AAP53615.1| Cell elongation protein
          DIMINUTO, putative, expressed [Oryza sativa Japonica
          Group] gi|110289050|gb|ABG66069.1| Cell elongation
          protein DIMINUTO, putative, expressed [Oryza sativa
          Japonica Group] gi|125531808|gb|EAY78373.1|
          hypothetical protein OsI_33459 [Oryza sativa Indica
          Group] gi|125574699|gb|EAZ15983.1| hypothetical protein
          OsJ_31428 [Oryza sativa Japonica Group]
          Length = 561

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = -3

Query: 92 MSDLQQPLVRPKRKKVLVDYLVQLRWIVVI 3
          M+DLQ+PLVRPKRKKVLVDYLV+ RWI+VI
Sbjct: 1  MADLQEPLVRPKRKKVLVDYLVKFRWILVI 30


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