BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00012456
         (2557 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24290.3| unnamed protein product [Vitis vinifera]              860   0.0  
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li...   858   0.0  
ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-li...   853   0.0  
tpg|DAA42160.1| TPA: hypothetical protein ZEAMMB73_255627 [Zea m...   848   0.0  
gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao]       847   0.0  
gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]       845   0.0  
ref|XP_002462723.1| hypothetical protein SORBIDRAFT_02g030910 [S...   835   0.0  
ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citr...   831   0.0  
ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-li...   828   0.0  
ref|XP_003575946.1| PREDICTED: replication factor C subunit 1-li...   827   0.0  
gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus pe...   825   0.0  
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi...   825   0.0  
ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis ...   825   0.0  
ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-li...   818   0.0  
ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutr...   816   0.0  
ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-li...   815   0.0  
ref|XP_006663537.1| PREDICTED: replication factor C subunit 1-li...   814   0.0  
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li...   814   0.0  
gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus...   813   0.0  
ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-li...   810   0.0  

>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  860 bits (2223), Expect = 0.0
 Identities = 476/766 (62%), Positives = 543/766 (70%), Gaps = 9/766 (1%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATASSKPAV----ASQKTPNSPNT-EKPNPVQVTQENSERRKTSKY 451
            SDIRKWFMK+HD       KPA     ASQ    SP T ++  PV   QE+S RRKTSKY
Sbjct: 6    SDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65

Query: 452  FAPSSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXX 631
            F             K+EK   + P+KRK QK +++    + P   K  + VDDD DDF  
Sbjct: 66   FQKP----------KDEKEMEELPAKRKTQKGTKESL--NPPPSKKIRRVVDDDDDDFVL 113

Query: 632  XXXXXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXX 811
                                      HK     DDE  DKD E P+K             
Sbjct: 114  --------------------------HKS----DDEKVDKDTEPPIKSGGRGRGGRGALV 143

Query: 812  XXXXXXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAE 988
                          FMNFGERKDPPHKGEKEVPEGA DCLAG TFV+SGTLDSLEREEAE
Sbjct: 144  TPAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAE 203

Query: 989  DLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKT 1168
            DLIKRHGGR+T +VSKKT+FLL DED+GG KS+KAKELG  FLTEDGLFDMI  S  AK 
Sbjct: 204  DLIKRHGGRVTGSVSKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKA 263

Query: 1169 PKKEEQNKKTSEKMHILYTTSSPSKV--KHDQA-SALGRKEVAKGVKPCIYPDKRKTKSG 1339
            P + E  KK+ +K+ +     SP KV  K DQ  ++ G++ V     P     K   ++ 
Sbjct: 264  PARGEP-KKSLDKVVLATPKKSPQKVEKKVDQVVNSSGKRTVLAATTP-----KHIYQTI 317

Query: 1340 VQSPLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXA 1519
              + LTWT+KY+PKVP DIIGNQS+VKQLH+WL HW++QFLH G               A
Sbjct: 318  GHASLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKA 377

Query: 1520 VLLSGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSN 1699
            VLLSG+PGIGK+TSAKLVSQMLGFQA+EVNASD+RGKA+ KI KG+GG+ +NSIKELVSN
Sbjct: 378  VLLSGTPGIGKTTSAKLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSN 437

Query: 1700 VALDSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLK 1879
             AL + +D SK PK+VLIMDEVDGMSAGDRGGVADL               NDRYSQKLK
Sbjct: 438  EALGAHMDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLK 497

Query: 1880 SLVNYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYM 2059
            SLVNYCL L+FRKPTKQQMAKRL Q+A+AEGLQ+NEIALEELAERV+GDMRMA+NQLQYM
Sbjct: 498  SLVNYCLLLSFRKPTKQQMAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYM 557

Query: 2060 SISQLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPL 2239
            S+S  VI YDD+R+RLLSSAKDEDISPF AVDKLFGFNGGKLRMDERIDLSMSDPDLVPL
Sbjct: 558  SLSMSVIKYDDVRQRLLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPL 617

Query: 2240 IVQENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFAS 2419
            ++QENY+NYRP+  G+DDNGVKRM+LLA AAESIGDGDI NVQIRRYRQWQLSQ+ SFAS
Sbjct: 618  LIQENYINYRPTLAGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFAS 677

Query: 2420 CIIPAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            CI PAAL+HGQRETLE GERNFNRFGGWLGKNST GKN RLL+D+H
Sbjct: 678  CITPAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLH 723


>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
          Length = 933

 Score =  858 bits (2218), Expect = 0.0
 Identities = 473/763 (61%), Positives = 539/763 (70%), Gaps = 6/763 (0%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATASSKPAV----ASQKTPNSPNT-EKPNPVQVTQENSERRKTSKY 451
            SDIRKWFMK+HD       KPA     ASQ    SP T ++  PV   QE+S RRKTSKY
Sbjct: 6    SDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRRKTSKY 65

Query: 452  FAPSSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXX 631
            F             K+EK   + P+KRK QK +++    + P   K  + VDDD DDF  
Sbjct: 66   FQKP----------KDEKEMEELPAKRKTQKGTKESL--NPPPSKKIRRVVDDDDDDFVL 113

Query: 632  XXXXXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXX 811
                                      HK     DDE  DKD E P+K             
Sbjct: 114  --------------------------HKS----DDEKVDKDTEPPIKSGGRGRGGRGALV 143

Query: 812  XXXXXXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAE 988
                          FMNFGERKDPPHKGEKEVPEGA DCLAG TFV+SGTLDSLEREEAE
Sbjct: 144  TPAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAE 203

Query: 989  DLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKT 1168
            DLIKRHGGR+T +VSKKT+FLL DED+GG KS+KAKELG  FLTEDGLFDMI  S  AK 
Sbjct: 204  DLIKRHGGRVTGSVSKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKA 263

Query: 1169 PKKEEQNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQS 1348
            P + E  KK+ +K+ +     SP KV+       G++ V     P     K   ++   +
Sbjct: 264  PARGEP-KKSLDKVVLATPKKSPQKVEKK-----GKRTVLAATTP-----KHIYQTIGHA 312

Query: 1349 PLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLL 1528
             LTWT+KY+PKVP DIIGNQS+VKQLH+WL HW++QFLH G               AVLL
Sbjct: 313  SLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLL 372

Query: 1529 SGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVAL 1708
            SG+PGIGK+TSAKLVSQMLGFQA+EVNASD+RGKA+ KI KG+GG+ +NSIKELVSN AL
Sbjct: 373  SGTPGIGKTTSAKLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEAL 432

Query: 1709 DSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLV 1888
             + +D SK PK+VLIMDEVDGMSAGDRGGVADL               NDRYSQKLKSLV
Sbjct: 433  GAHMDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLV 492

Query: 1889 NYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSIS 2068
            NYCL L+FRKPTKQQMAKRL Q+A+AEGLQ+NEIALEELAERV+GDMRMA+NQLQYMS+S
Sbjct: 493  NYCLLLSFRKPTKQQMAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLS 552

Query: 2069 QLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQ 2248
              VI YDD+R+RLLSSAKDEDISPF AVDKLFGFNGGKLRMDERIDLSMSDPDLVPL++Q
Sbjct: 553  MSVIKYDDVRQRLLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQ 612

Query: 2249 ENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCII 2428
            ENY+NYRP+  G+DDNGVKRM+LLA AAESIGDGDI NVQIRRYRQWQLSQ+ SFASCI 
Sbjct: 613  ENYINYRPTLAGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCIT 672

Query: 2429 PAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            PAAL+HGQRETLE GERNFNRFGGWLGKNST GKN RLL+D+H
Sbjct: 673  PAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLH 715


>ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-like [Setaria italica]
          Length = 989

 Score =  853 bits (2203), Expect = 0.0
 Identities = 459/774 (59%), Positives = 542/774 (70%), Gaps = 15/774 (1%)
 Frame = +2

Query: 281  MSSDIRKWFMKQHDKG----ATASSKPAVASQKTPNSPNTEK----PNPVQVTQENSERR 436
            MSSDIRKWFMK  DKG    A   S PA A +K P     EK    P+      + S RR
Sbjct: 1    MSSDIRKWFMKTQDKGGASGAVKPSGPAAAEKKKPVLSIPEKKQAPPSLASCDHDPSARR 60

Query: 437  KTSKYFAPSSKEVNPQTIIKEE--KVAAKTPSKRKPQKSSEDIAEDSKPTLPKR-SKTVD 607
            KTSKYF   +++ +   +      K   K  +KRK QK S ++ +D+KP   K+ SK  +
Sbjct: 61   KTSKYFGSKTEKDSDVEMADATAGKSTEKNAAKRKLQKGSNELKDDTKPLPAKKMSKDDE 120

Query: 608  DDHDDFXXXXXXXXXXXXXXXXXXXXVTEMTKSSHKVG--DNLDDEINDKDPETPVKXXX 781
            DD+DDF                     + +       G  D  +++  D+D +TP K   
Sbjct: 121  DDNDDFVSPSKKKTPVKPPPSKKPKVESNVEAPGRTTGTDDGEEEDKMDEDAKTPSKGAG 180

Query: 782  XXXXXXXXXXXXXXXXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGT 958
                                    FMNFGERKDPPHKGEKEVPEGAPDCL+G TFV+SGT
Sbjct: 181  RGRGRGGRGGAAPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGT 240

Query: 959  LDSLEREEAEDLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFD 1138
            LDSLEREEA DLIKR+GGR+T ++SKKTS+LLADED+GG KS+KAK+LG+PFLTEDGLFD
Sbjct: 241  LDSLEREEATDLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLTEDGLFD 300

Query: 1139 MIRKSKPAKTPKKEEQNKKTSEKMHILYTTSSPSKV-KHDQASALGRKEVAKGVKPCIYP 1315
            +IRKSKPAK P    Q+   SEK+  L T SSP+KV K  +AS +G+   +K        
Sbjct: 301  LIRKSKPAKAPVDGHQSSNGSEKLQKLQTKSSPAKVEKRAEASPVGKSFASKSNVANASA 360

Query: 1316 DKRKTKSGVQSPLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXX 1495
            + RK K+  +  + WT+KYRPKVP DI+GNQS+VKQLHDWL  WD QFLH+GQ       
Sbjct: 361  ENRKAKNIDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDTQFLHSGQKGKGKKQ 420

Query: 1496 XXXXXXXAVLLSGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSN 1675
                   AVLLSG PGIGK+T+AK+VSQMLG QA+EVNASDSRGKAD+KI KGVGG+TSN
Sbjct: 421  ADNGAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSN 480

Query: 1676 SIKELVSNVALDSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXN 1855
            S+KEL+SN  L+   +  K PK+VLIMDEVDGMSAGDRGGVADL               N
Sbjct: 481  SVKELISNATLNYSDNRLKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICN 540

Query: 1856 DRYSQKLKSLVNYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRM 2035
            DRYSQKLKSLVNYCL LNFRKPTKQQM+KRL +IA  EG+Q  E A+EELAERV GD+RM
Sbjct: 541  DRYSQKLKSLVNYCLMLNFRKPTKQQMSKRLMEIAKKEGIQAQENAMEELAERVHGDIRM 600

Query: 2036 AINQLQYMSISQLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 2215
            A+N LQYMS+SQ V+ YDDIR+RL SSAKDEDISPFTAVDKLFGFNGG+LRMDERID  M
Sbjct: 601  ALNHLQYMSLSQSVVKYDDIRERLNSSAKDEDISPFTAVDKLFGFNGGRLRMDERIDFGM 660

Query: 2216 SDPDLVPLIVQENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQL 2395
            SDPDLVPLI+QENY+NYRP++IG+D++GVKRMN LA AAESI DGD+ NVQIRRYRQWQL
Sbjct: 661  SDPDLVPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQL 720

Query: 2396 SQSSSFASCIIPAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            SQ++ FAS I+PAA MHG RE LE GERNFNRFGGWLGK STT KN RLL+D H
Sbjct: 721  SQAACFASSIVPAAFMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDAH 774


>tpg|DAA42160.1| TPA: hypothetical protein ZEAMMB73_255627 [Zea mays]
          Length = 985

 Score =  848 bits (2191), Expect = 0.0
 Identities = 459/773 (59%), Positives = 542/773 (70%), Gaps = 14/773 (1%)
 Frame = +2

Query: 281  MSSDIRKWFMKQHDKGATASS---KPA-VASQKTPNSPNTEK----PNPVQVTQENSERR 436
            MSSDIRKWFMK  DK A AS    KP+  A++K P     EK    P       + S RR
Sbjct: 1    MSSDIRKWFMKPQDKSAAASGAAGKPSGSAAEKKPVLSIPEKKSAPPALASCDHDTSARR 60

Query: 437  KTSKYFAPSSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDH 616
            KTSKYF   SK      +   +    K+ +KRK QK ++++ EDSKP   K  K  DD+ 
Sbjct: 61   KTSKYFG--SKAEKDSDVQMADASGGKSAAKRKLQKCNDEVKEDSKPFPAK--KMFDDEE 116

Query: 617  DDFXXXXXXXXXXXXXXXXXXXXVTEMTKSSHK---VGDNLDDEINDKDPETPVKXXXXX 787
            DD                     V    ++  K   V D  D++  D+D +TP K     
Sbjct: 117  DDDFVAPAKKKTPVKPPPSKKLKVESNVEAPAKTTGVDDAEDEDRMDEDAKTPSKGAGRG 176

Query: 788  XXXXXXXXXXXXXXXXXXXXX--FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTL 961
                                   FMNFGERKDPPHKGEKEVPEGAPDCL+G TFV+SGTL
Sbjct: 177  RGRGGRGGAGAAPGGRGRGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGTL 236

Query: 962  DSLEREEAEDLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDM 1141
            DSLEREEA DLIKR+GGR+T ++SKKTS+LLADED+GG KS+KAK+LG+PFLTEDGLFD+
Sbjct: 237  DSLEREEATDLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLTEDGLFDL 296

Query: 1142 IRKSKPAKTPKKEEQNKKTSEKMHILYTTSSPSKV-KHDQASALGRKEVAKGVKPCIYPD 1318
            IRKSKPAK P  + QN  +SEK+    T SSP+KV K  +ASA+G+   +         D
Sbjct: 297  IRKSKPAKAPVDKRQNNNSSEKLQKSQTKSSPAKVEKRAEASAVGKSIASNSNAASASAD 356

Query: 1319 KRKTKSGVQSPLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXX 1498
            K+K K   +  + WT+KYRPKVP DI+GNQS+VKQLHDWL  WD  FLH+GQ        
Sbjct: 357  KQKPKIVDRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGKGKKQT 416

Query: 1499 XXXXXXAVLLSGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNS 1678
                  AVLLSG PGIGK+T+AK+VSQMLG QA+EVNASDSRGKAD+KI KGVGG+TSNS
Sbjct: 417  DSAAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNS 476

Query: 1679 IKELVSNVALDSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXND 1858
            IKEL++N  L+   +  K PK+VL+MDEVDGMSAGDRGGVADL               ND
Sbjct: 477  IKELINNATLNYSDNRLKHPKAVLVMDEVDGMSAGDRGGVADLIASIKISKIPIICICND 536

Query: 1859 RYSQKLKSLVNYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMA 2038
            RYSQKLK+LVNYCL LNFRKPTKQQM KRL +IA  EG+Q  E A+EELAERV GD+RMA
Sbjct: 537  RYSQKLKNLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIRMA 596

Query: 2039 INQLQYMSISQLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMS 2218
            +N LQYMS+SQ V+ YDDI++RL SS+KDEDISPFTAVDKLFGFNGG+LRMDER+D  MS
Sbjct: 597  LNHLQYMSLSQSVVKYDDIKERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERMDFGMS 656

Query: 2219 DPDLVPLIVQENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLS 2398
            DPDLVPLI+QENY+NYRP++IG+D++GVKRMN LA AAESI DGD+ NVQIRRYRQWQLS
Sbjct: 657  DPDLVPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLS 716

Query: 2399 QSSSFASCIIPAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            Q++ FAS I+PAALMHG RE LE GERNFNRFGGWLGK STT KN RLL+DVH
Sbjct: 717  QAACFASSIVPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDVH 769


>gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao]
          Length = 1012

 Score =  847 bits (2189), Expect = 0.0
 Identities = 468/761 (61%), Positives = 538/761 (70%), Gaps = 4/761 (0%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATASSKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSKYFAPSS 466
            SDIRKWFMK HDKG   +SKPA      P   NT+    V   +ENS RRKTSKYF P+ 
Sbjct: 2    SDIRKWFMKAHDKGKGNASKPA-----NPAPTNTDS---VPGGRENSGRRKTSKYF-PAG 52

Query: 467  KEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXXXXXXX 646
            K+       K E+   + P+KRK Q  +E +    KP   K+   V  D DDF       
Sbjct: 53   KQQP-----KGEQGTEELPAKRKVQNENESV---EKPPPSKKPSKVGID-DDFVLPKSRN 103

Query: 647  XXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXXXXXXX 826
                                  +  D  D++ + KD E+PVK                  
Sbjct: 104  TVDVTPSKKRKSGSGRGVAQKAEDNDESDED-DAKDLESPVKSGGRGGRGGTGASVAPAS 162

Query: 827  XXXXXXXX--FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAEDLIK 1000
                      FMNFGERKDPPHKGEKEVPEGAPDCLAG TFV+SGTLDSLEREEAEDLIK
Sbjct: 163  GRGRGRGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIK 222

Query: 1001 RHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTPKKE 1180
            RHGGRIT+AVSKKT++LL DED+ GRKSSKAKELGIPFLTEDGLFDMIR S   K   KE
Sbjct: 223  RHGGRITTAVSKKTNYLLCDEDIEGRKSSKAKELGIPFLTEDGLFDMIRASNCGKAHSKE 282

Query: 1181 EQNKKTSEKMHILYTTSSPSK--VKHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQSPL 1354
            E +KK++E         SP K  VK + +SA   K   K +   +   K++ +    S L
Sbjct: 283  E-SKKSAESFAASLPKKSPQKMEVKSNSSSA---KISGKSLTTSVSSTKQRGQPIQHSSL 338

Query: 1355 TWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLLSG 1534
            TWT+KYRPKVP ++ GNQS+V QLH+WL HW++QFL  G               AVLLSG
Sbjct: 339  TWTEKYRPKVPNEMTGNQSLVNQLHNWLAHWNEQFLGTGSKGKGKKQNDPGAKKAVLLSG 398

Query: 1535 SPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVALDS 1714
            +PGIGK+TSAKLVSQMLGFQ +EVNASDSRGKAD KI KG+GG+ +NSIKELVSN AL  
Sbjct: 399  TPGIGKTTSAKLVSQMLGFQTIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSV 458

Query: 1715 GLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNY 1894
             +D SK  K+VLIMDEVDGMSAGDRGG+ADL               NDRYSQKLKSLVNY
Sbjct: 459  NMDRSKHVKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNY 518

Query: 1895 CLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSISQL 2074
            CL L+FRKPTKQQMAKRL Q+A+AEGLQ+NEIAL+ELAERV+GDMRMA+NQLQYMS+S  
Sbjct: 519  CLLLSFRKPTKQQMAKRLMQVANAEGLQVNEIALQELAERVNGDMRMALNQLQYMSLSMS 578

Query: 2075 VINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQEN 2254
            VI YDDIR+RLLS +KDEDISPFTAVDKLFG  GGKLRMD+RIDLSMSDPDLVPL++QEN
Sbjct: 579  VIKYDDIRQRLLSGSKDEDISPFTAVDKLFGIYGGKLRMDQRIDLSMSDPDLVPLLIQEN 638

Query: 2255 YVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPA 2434
            Y+NYRPSSIG+DD+G+KRMNL+A AAESIGDGDI NVQIRRYRQWQLSQ+ S +SCIIPA
Sbjct: 639  YINYRPSSIGKDDSGMKRMNLIAQAAESIGDGDIINVQIRRYRQWQLSQAGSLSSCIIPA 698

Query: 2435 ALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            AL+HGQRETLE GERNFNRFGGWLGKNST  KN RLL+D+H
Sbjct: 699  ALLHGQRETLEQGERNFNRFGGWLGKNSTMSKNYRLLEDLH 739


>gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]
          Length = 1047

 Score =  845 bits (2183), Expect = 0.0
 Identities = 458/767 (59%), Positives = 534/767 (69%), Gaps = 5/767 (0%)
 Frame = +2

Query: 272  DKEMSSDIRKWFMKQHDKG-ATASSKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSK 448
            D    SDIRKWFMK H+KG   ++SKPA ++Q  P  P       VQ +Q+NS RRKTSK
Sbjct: 83   DAMSQSDIRKWFMKSHEKGNGNSASKPAKSAQALPEEP-------VQGSQDNSGRRKTSK 135

Query: 449  YFAPSSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFX 628
            YF+            K+EK   + P KRK Q  S ++    KP+  K+   VDDD D   
Sbjct: 136  YFSAEKP--------KDEKEMVEVPVKRKTQTDSHEMV---KPSPAKKIHKVDDDDDFVL 184

Query: 629  XXXXXXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEIND--KDPETPVKXXXXXXXXXX 802
                                   T       D  DD  +D  K  ETP K          
Sbjct: 185  PNTKEKPVASTPRKKLKSGSGRGTGQKPLDIDESDDGDDDEVKHVETPSKSGGRGRGGGR 244

Query: 803  XXXXXXXXXXXXXXXX--FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLER 976
                              FMNFGERKDPPHKGEKEVPEGA DCLAG TFV+SGTLDSLER
Sbjct: 245  GASVAPSGGRGRGAGRGGFMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLER 304

Query: 977  EEAEDLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSK 1156
            EEAEDLIK HGGR+T +VSKKT++LL DED+ GRKS KAKELG PFL+EDGLFDMIR S 
Sbjct: 305  EEAEDLIKCHGGRVTGSVSKKTNYLLCDEDIEGRKSEKAKELGTPFLSEDGLFDMIRASS 364

Query: 1157 PAKTPKKEEQNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKS 1336
             AK PK+E +       + I   +    ++K+   SA  +   +K +      D++K ++
Sbjct: 365  RAK-PKQESKKSVDDADVPISKKSMQKIELKNCTGSAAPKDVASKSLAARASLDRKKIQT 423

Query: 1337 GVQSPLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXX 1516
               S LTWT+KY+PKV  DIIGNQS+VKQLH WL +W +QFL AG               
Sbjct: 424  AEHSALTWTEKYKPKVTNDIIGNQSLVKQLHYWLANWHEQFLDAGSKKKGKKANDPGVKK 483

Query: 1517 AVLLSGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVS 1696
            AVLLSG+PGIGK+TSAKLVSQMLGFQ +EVNASDSRGKAD KI KG+GG+ +NSIKELVS
Sbjct: 484  AVLLSGTPGIGKTTSAKLVSQMLGFQMIEVNASDSRGKADAKIEKGIGGSNANSIKELVS 543

Query: 1697 NVALDSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKL 1876
            N AL   +DWSK PK+VLIMDEVDGMSAGDRGG+ADL               NDRYSQKL
Sbjct: 544  NEALSVNMDWSKHPKTVLIMDEVDGMSAGDRGGIADLISSIKISKIPIICICNDRYSQKL 603

Query: 1877 KSLVNYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQY 2056
            KSLVNYCL L+FRKPTKQQMAKRL Q+A++EGLQ+NEIALEELAERVSGDMRMA+NQL Y
Sbjct: 604  KSLVNYCLLLSFRKPTKQQMAKRLMQVANSEGLQVNEIALEELAERVSGDMRMALNQLHY 663

Query: 2057 MSISQLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVP 2236
            MS+S  VI YDD+R+RLL+SAKDEDISPFTAVDKLFGFN GKLRMDER+DLSMSD DLVP
Sbjct: 664  MSLSMSVIKYDDVRQRLLASAKDEDISPFTAVDKLFGFNAGKLRMDERMDLSMSDLDLVP 723

Query: 2237 LIVQENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFA 2416
            L++QENYVNYRPSS+G+DDNG+ RM+L+A AAESIGDGDIFNVQIR+YRQWQLSQSS+ +
Sbjct: 724  LLIQENYVNYRPSSVGKDDNGISRMSLIARAAESIGDGDIFNVQIRKYRQWQLSQSSALS 783

Query: 2417 SCIIPAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            SCIIP AL+HGQR+ LE GERNFNRF GWLGKNST  KN+RLL+D+H
Sbjct: 784  SCIIPTALLHGQRQILEQGERNFNRFSGWLGKNSTFNKNMRLLEDLH 830


>ref|XP_002462723.1| hypothetical protein SORBIDRAFT_02g030910 [Sorghum bicolor]
            gi|241926100|gb|EER99244.1| hypothetical protein
            SORBIDRAFT_02g030910 [Sorghum bicolor]
          Length = 1025

 Score =  835 bits (2157), Expect = 0.0
 Identities = 464/815 (56%), Positives = 552/815 (67%), Gaps = 56/815 (6%)
 Frame = +2

Query: 281  MSSDIRKWFMKQHDKGAT----ASSKP---AVASQKTPNSPNTEKPN------------- 400
            MSSDIRKWFMK H K A     A++KP   A A +K P     EK +             
Sbjct: 1    MSSDIRKWFMKAHGKNAAPSGAAATKPSGAAAAEKKKPVLSIPEKKSAPPALGSSFGQCV 60

Query: 401  -----------PVQ--VTQENSE----------------RRKTSKYFAPSSKEVNPQTII 493
                       PV   VT  N+                 RRKTSKYF   +++ +   + 
Sbjct: 61   TCSNNRAIGNFPVGQCVTCSNNRAIGNFPVASCDHDPPARRKTSKYFGSKAEKDSDVEMA 120

Query: 494  KEE--KVAAKTPSKRKPQKSSEDIAEDSKPTLPKR-SKTVDDDHDDFXXXXXXXXXXXXX 664
                   A K+ +KRK QK + ++ ED+KP   K+ SK  +DD DDF             
Sbjct: 121  DASAGNSADKSAAKRKLQKCNNELKEDNKPLPAKKISKDEEDDDDDFVAPPKKKTPVKPP 180

Query: 665  XXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVK---XXXXXXXXXXXXXXXXXXXXX 835
                        +S+ +V D  D++  D+D +TP K                        
Sbjct: 181  PSK-----KAKVESNAQVDDAEDEDRMDEDAKTPSKGAGRGRGRGGRGGAGAAPGGRGRG 235

Query: 836  XXXXXFMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAEDLIKRHGGR 1015
                 FMNFGERKDPPHKGEKEVPEGAPDCL+G TFV+SGTLDSLEREEA DLIKR+GGR
Sbjct: 236  GGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGTLDSLEREEAADLIKRYGGR 295

Query: 1016 ITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTPKKEEQNKK 1195
            +T ++SKKTS+LLADED+GG KS+KAK+LG+PFLTEDGLFD+IRKSKPAK P  ++Q+  
Sbjct: 296  VTGSISKKTSYLLADEDLGGVKSNKAKDLGVPFLTEDGLFDLIRKSKPAKAPVDKQQSNN 355

Query: 1196 TSEKMHILYTTSSPSKV-KHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQSPLTWTDKY 1372
            + EK+    T SSP+KV K  +ASA+G+   +         DK+K K+  +  + WT+KY
Sbjct: 356  SFEKLQKSQTKSSPAKVEKRAEASAVGKSIASNSNAASASADKQKPKNVDRGSMQWTEKY 415

Query: 1373 RPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLLSGSPGIGK 1552
            RPKVP DI+GNQS+VKQLHDWL  WD  FLH+GQ              AVLLSG PGIGK
Sbjct: 416  RPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGKGKKQADSAAKKAVLLSGPPGIGK 475

Query: 1553 STSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVALDSGLDWSK 1732
            +T+AK+VSQMLG QA+EVNASDSRGKAD+KI KGVGG+TSNSIKEL+SN  L+ G + SK
Sbjct: 476  TTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATLNYGDNRSK 535

Query: 1733 PPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLALNF 1912
             PK+VLIMDEVDGMSAGDRGGVADL               NDRYSQKLKSLVNYCL LNF
Sbjct: 536  HPKAVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLMLNF 595

Query: 1913 RKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSISQLVINYDD 2092
            RKPTKQQM KRL +IA  EG+Q  E A+EELAERV GD+RMA+N LQYMS+SQ V+ YDD
Sbjct: 596  RKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDD 655

Query: 2093 IRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENYVNYRP 2272
            IR+RL SS+KDEDISPFTAVDKLFGFNGG+LRMDERID  MSDPDLVPLI+QENY+NYRP
Sbjct: 656  IRERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERIDFGMSDPDLVPLIIQENYINYRP 715

Query: 2273 SSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAALMHGQ 2452
            +++G+D++GVKRMN LA AAESI DGD+ NVQIRRYRQWQLSQ++ FAS I+PAA MHG 
Sbjct: 716  NTLGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQLSQAACFASSIVPAAWMHGN 775

Query: 2453 RETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            RE LE GERNFNRFGGWLGK STT KN RLL+DVH
Sbjct: 776  REVLEAGERNFNRFGGWLGKYSTTNKNRRLLEDVH 810


>ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citrus clementina]
            gi|557525989|gb|ESR37295.1| hypothetical protein
            CICLE_v10027762mg [Citrus clementina]
          Length = 958

 Score =  831 bits (2146), Expect = 0.0
 Identities = 454/760 (59%), Positives = 537/760 (70%), Gaps = 1/760 (0%)
 Frame = +2

Query: 281  MSSDIRKWFMKQHDKGATASSKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSKYFAP 460
            M  DIRKWF+K H K    ++ PA  +     + N+E   P     E+  RRKTSKYFA 
Sbjct: 1    MPQDIRKWFLKPHSKDKDNATIPANTALSNLETTNSE---PGCGGHESMGRRKTSKYFAT 57

Query: 461  SSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXXXXX 640
              ++  P+   ++E++    P+KRK +K   D  +  + +  K+    DDD DDF     
Sbjct: 58   DKQK--PEDGGEKEEL----PAKRKAEK---DDGKSVRSSPLKKFHKADDDDDDFVPPSV 108

Query: 641  XXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXXXXX 820
                            +    +   V  + D+E + K  E+P+K                
Sbjct: 109  KKNSVGATPSKKLKSGSGRAVAQKSVDIDDDEEEDVKKTESPLKSSGRGRGGRGASGAPA 168

Query: 821  XXXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAEDLI 997
                       FMNFGERKDPPHKGEKEVPEGAPDCLAG TFV+SGTLDSLEREEAEDLI
Sbjct: 169  VGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLI 228

Query: 998  KRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTPKK 1177
            KRHGGR+T +V KKT++LL DED+GG KS+KAKELG PFLTEDGLFDMIR SKP K   +
Sbjct: 229  KRHGGRVTESVPKKTNYLLCDEDIGGAKSTKAKELGTPFLTEDGLFDMIRASKPMKALAQ 288

Query: 1178 EEQNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQSPLT 1357
             E +KK+ EK+       SP  ++    SA   K  ++ +K    P KRK ++  QS LT
Sbjct: 289  AE-SKKSVEKVAASLPKKSPQNIEAKSTSA--PKAPSERMKTVASPAKRKGQNIQQSLLT 345

Query: 1358 WTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLLSGS 1537
            WT+KYRPK P +I+GNQ +VKQLH WL HW+++FL  G               A LLSGS
Sbjct: 346  WTEKYRPKTPNEIVGNQQLVKQLHAWLAHWNEKFLDTGTKRNGKKQNDASAEKAALLSGS 405

Query: 1538 PGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVALDSG 1717
            PG+GK+T+AKLV QMLGFQA+EVNASDSRGKAD KI KG+GG+ +NSIKELVSN AL + 
Sbjct: 406  PGMGKTTAAKLVCQMLGFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSAN 465

Query: 1718 LDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYC 1897
            +D SK PK+VLIMDEVDGMSAGDRGG+ADL               NDRYSQKLKSLVNYC
Sbjct: 466  MDRSKHPKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYC 525

Query: 1898 LALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSISQLV 2077
              L FRKP KQ++AKRL QIA+AEGL++NEIALEELA+RV+GD+RMAINQLQYMS+S  V
Sbjct: 526  SDLRFRKPRKQEIAKRLMQIANAEGLEVNEIALEELADRVNGDIRMAINQLQYMSLSMSV 585

Query: 2078 INYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENY 2257
            I YDDIR+RLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPL++QENY
Sbjct: 586  IKYDDIRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENY 645

Query: 2258 VNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAA 2437
            +NYRPSS GRD+  VKR++L+A AAESI DGDIFNVQIRR +QWQLSQSSS ASCIIPAA
Sbjct: 646  INYRPSSAGRDE--VKRLSLIARAAESISDGDIFNVQIRRNQQWQLSQSSSLASCIIPAA 703

Query: 2438 LMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            LMHGQRETLE GERNFNRFGGWLGKNST GKNLRLL+D+H
Sbjct: 704  LMHGQRETLEQGERNFNRFGGWLGKNSTMGKNLRLLEDLH 743


>ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Citrus
            sinensis] gi|568869228|ref|XP_006487830.1| PREDICTED:
            replication factor C subunit 1-like isoform X2 [Citrus
            sinensis]
          Length = 958

 Score =  828 bits (2138), Expect = 0.0
 Identities = 453/760 (59%), Positives = 533/760 (70%), Gaps = 1/760 (0%)
 Frame = +2

Query: 281  MSSDIRKWFMKQHDKGATASSKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSKYFAP 460
            M  DIRKWF+K H K    ++ PA  +     + N+E   P     E+  RRKTSKYFA 
Sbjct: 1    MPQDIRKWFLKPHSKDKDNATIPANTALSNLETTNSE---PGCGGHESMGRRKTSKYFAT 57

Query: 461  SSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXXXXX 640
              ++  P+   ++E++ AK  +K+   KS       S P   K+    DDD DDF     
Sbjct: 58   DKQK--PEDGGEKEELPAKRKAKKDDGKSVR-----SSPL--KKFHKADDDDDDFVPPSV 108

Query: 641  XXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXXXXX 820
                            +    +   V  + D+E + K  E+P+K                
Sbjct: 109  KKNSVGATPSKKLKSGSGRAVAQKSVDIDDDEEEDVKKTESPLKSSGRGRGGRGASGAPA 168

Query: 821  XXXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAEDLI 997
                       FMNFGERKDPPHKGEKEVPEGAPDCL G TFV+SGTLDSLEREEAEDLI
Sbjct: 169  VGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLGGLTFVISGTLDSLEREEAEDLI 228

Query: 998  KRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTPKK 1177
            KRHGGR+T +VSKKT++LL DED+ G KS+KAKELG PFLTEDGLFDMIR SKP K   +
Sbjct: 229  KRHGGRVTGSVSKKTNYLLCDEDIAGAKSTKAKELGTPFLTEDGLFDMIRASKPMKALAQ 288

Query: 1178 EEQNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQSPLT 1357
             E +KK+ EK+       SP  ++    SA   K   + +K    P KRK ++  QS LT
Sbjct: 289  AE-SKKSVEKVAASLPKKSPQNIEAKSTSA--PKAPIERMKTVASPAKRKGQNIQQSSLT 345

Query: 1358 WTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLLSGS 1537
            WT+KYRPK P +I+GNQ +VKQLH WL HW+++FL  G               A +LSGS
Sbjct: 346  WTEKYRPKTPNEIVGNQQLVKQLHTWLAHWNEKFLDTGTKRNGKKQNDASAEKAAILSGS 405

Query: 1538 PGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVALDSG 1717
            PG+GK+T+AKLV QMLGFQA+EVNASDSRGKAD KI KG+GG+ +NSIKELVSN AL + 
Sbjct: 406  PGMGKTTAAKLVCQMLGFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSAN 465

Query: 1718 LDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYC 1897
            +D SK PK+VLIMDEVDGMSAGDRGG+ADL               NDRYSQKLKSLVNYC
Sbjct: 466  MDRSKHPKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYC 525

Query: 1898 LALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSISQLV 2077
              L FRKP KQ++AKRL QIA+AEGL++NEIALEELA+RV+GD+RMAINQLQYMS+S  V
Sbjct: 526  SDLRFRKPRKQEIAKRLMQIANAEGLEVNEIALEELADRVNGDIRMAINQLQYMSLSLSV 585

Query: 2078 INYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENY 2257
            I YDDIR+RLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPL++QENY
Sbjct: 586  IKYDDIRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENY 645

Query: 2258 VNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAA 2437
            +NYRPSS GRD+  VKR++L+A AAESI DGDIFNVQIRR +QWQLSQSSS ASCIIPAA
Sbjct: 646  INYRPSSAGRDE--VKRLSLIARAAESISDGDIFNVQIRRNQQWQLSQSSSLASCIIPAA 703

Query: 2438 LMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            LMHGQRETLE GERNFNRFGGWLGKNST GKNLRLL+D+H
Sbjct: 704  LMHGQRETLEQGERNFNRFGGWLGKNSTMGKNLRLLEDLH 743


>ref|XP_003575946.1| PREDICTED: replication factor C subunit 1-like [Brachypodium
            distachyon]
          Length = 1048

 Score =  827 bits (2136), Expect = 0.0
 Identities = 467/807 (57%), Positives = 538/807 (66%), Gaps = 46/807 (5%)
 Frame = +2

Query: 275  KEMSSDIRKWFMKQHDKGATASSKPAVASQ-----KTP--NSPNTEKPNPVQVTQENSER 433
            +  SSDIRKWFMK  DK A A+ KP+ AS      K P  + P    P+ V   ++ S R
Sbjct: 40   RRRSSDIRKWFMKPCDKNAGAA-KPSGASAGATGAKKPVLSIPEKAAPSKVPGDKDTSAR 98

Query: 434  RKTSKYFAPSSKEVNPQTIIKEEKVAAKTPSKRKPQKSS--------------------- 550
            RK SKYFAP ++         +  V   + SKRK QKSS                     
Sbjct: 99   RKASKYFAPKTET--------DSDVTETSLSKRKLQKSSDELDDDVKPLAAHKVLEDEDD 150

Query: 551  EDIAEDSK---PTLPKRSKTV-----DDDHDDFXXXXXXXXXXXXXXXXXXXXVTEM--- 697
            +D    SK   P  P  SK +     DDD D                             
Sbjct: 151  DDFVSPSKKKTPVKPPPSKKLKAASNDDDEDRMDEDAKTPSKAAGRGRGRGRGRGGRGAG 210

Query: 698  TKSSHKVGDNLDDEIN----DKDPETPVKXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFG 865
              ++H    +LDD+      D+D +T  K                          FMNFG
Sbjct: 211  AGAAHGKTSSLDDDGEEDRMDEDDKTTSKAAGRGRGGRGGATPGGRGRGGGGRG-FMNFG 269

Query: 866  ERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAEDLIKRHGGRITSAVSKKTS 1045
            ERKDPPHKGEKEVPEGAPDCLAG TFV+SGTLDSLEREEA DLIKRHGGR+T ++SKKTS
Sbjct: 270  ERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAGDLIKRHGGRVTGSISKKTS 329

Query: 1046 FLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTPKKEEQNKKTSEKMHILYT 1225
            +LLADEDVGG KS+KAK+LG+PFLTEDGLFDMIRKSKPAK P  + +  K SEK+    +
Sbjct: 330  YLLADEDVGGVKSTKAKDLGVPFLTEDGLFDMIRKSKPAKPPVNKHEMNKISEKLQKSPS 389

Query: 1226 TSSPSKVKH---DQASALGRKEVAKGVKPCIYPDKRKTKSGVQSPLTWTDKYRPKVPADI 1396
             SSP KV+    DQ S + +   +K  K     D +K K   +  L WT+KYRPKVP DI
Sbjct: 390  KSSPVKVERRAVDQVSTINKSIASKSNKESASTDYQKAKIVDRGALQWTEKYRPKVPNDI 449

Query: 1397 IGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLLSGSPGIGKSTSAKLVS 1576
            +GNQS+VKQLHDWL  W+ QFLH+ Q              AVLLSG PGIGK+T+AK+VS
Sbjct: 450  VGNQSMVKQLHDWLKSWEGQFLHSAQKGKGKKQIDGGAKKAVLLSGPPGIGKTTTAKVVS 509

Query: 1577 QMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVALDSGLDWSKPPKSVLIM 1756
            QMLG QA+EVNASDSRGKAD+KI KGVGG+TSNSIK L+SN  L+   + +KPPK+VL+M
Sbjct: 510  QMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKVLISNATLNYSDNRTKPPKAVLVM 569

Query: 1757 DEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLALNFRKPTKQQM 1936
            DEVDGMSAGDRGGVADL               NDRYSQKLKSLVNYCL LNFRKPTKQQM
Sbjct: 570  DEVDGMSAGDRGGVADLIASIKISKIPIVCICNDRYSQKLKSLVNYCLLLNFRKPTKQQM 629

Query: 1937 AKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSISQLVINYDDIRKRLLSS 2116
             KRL  IA  EG+Q  E A+EELAERV GD+RMA+N LQYMS+SQ V+ YDDIR RL SS
Sbjct: 630  GKRLMDIARKEGIQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIRLRLNSS 689

Query: 2117 AKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENYVNYRPSSIGRDDN 2296
            AKDEDISPFTAVDKLFGFNGG+LRMDERIDLSMSDPDLVPLI+QENY+NYRPS++G+DD+
Sbjct: 690  AKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPSAVGKDDS 749

Query: 2297 GVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAALMHGQRETLEPGE 2476
            GVKRMN LA AAESI DGDI NVQIRRYRQWQLSQ++  AS I+PAALMHG RET E GE
Sbjct: 750  GVKRMNCLARAAESIADGDIVNVQIRRYRQWQLSQAACLASSIVPAALMHGNRETFEAGE 809

Query: 2477 RNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            RNFNRFGGWLGK STT KN RLL+DVH
Sbjct: 810  RNFNRFGGWLGKYSTTNKNKRLLEDVH 836


>gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
          Length = 961

 Score =  825 bits (2132), Expect = 0.0
 Identities = 455/773 (58%), Positives = 528/773 (68%), Gaps = 14/773 (1%)
 Frame = +2

Query: 281  MSSDIRKWFMKQHDKGATASSKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSKYFAP 460
            M +DIRKWFMK HDKG     KPA  + +TP++        V   QEN  RRKTSKYF  
Sbjct: 1    MHADIRKWFMKSHDKGN--GKKPAPTTSQTPST--------VHGGQENPGRRKTSKYFTT 50

Query: 461  SSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXXXXX 640
               +   +T         + P+KRK  K  +   E  KP+  K+   V DD DDF     
Sbjct: 51   DKPKAEKET---------EVPAKRKTHKEPD---ESVKPSPAKKVHKVVDDDDDFVLPHS 98

Query: 641  XXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXXXXX 820
                            + +         +   + + KD E+P K                
Sbjct: 99   KKNSVDATPSKKLKSASGVGVPQKLTAIDEGGDNDVKDAESPHKPGGKGRGGRGTSAGPA 158

Query: 821  XXXXXXXXXX-----------FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDS 967
                                 FMNFG+RKDPPHKGEKEVPEGAPDCLAG TFV+SGTLDS
Sbjct: 159  GGRGTSAGPAGGRGRGAGRGGFMNFGDRKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDS 218

Query: 968  LEREEAEDLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIR 1147
            LEREEAE+LIKRHGGRIT +VSKKT++LL DED+ GRKSSKAKELG  FLTEDGLFDMIR
Sbjct: 219  LEREEAEELIKRHGGRITGSVSKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIR 278

Query: 1148 KSKPAKTPKKEEQNKKTSEKMHILYTTSSPSKVKHDQ---ASALGRKEVAKGVKPCIYPD 1318
             S  AK P +E + K   +         SP+KV       AS++  K++           
Sbjct: 279  ASIRAKVPVQEAK-KSVDDAAAAPLPKKSPNKVASKSISLASSVSHKQLESDASHA---- 333

Query: 1319 KRKTKSGVQSPLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXX 1498
            +RK +    S  TWT+KYRPKVP DIIGNQS+VKQLHDWL+HW +QFL  G         
Sbjct: 334  RRKKQPTEHSASTWTEKYRPKVPNDIIGNQSLVKQLHDWLVHWHEQFLDTGNKKKGKNPT 393

Query: 1499 XXXXXXAVLLSGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNS 1678
                  AVLLSG+PGIGK+TSAKLVSQMLGFQ +EVNASDSRGKAD+KI KG+GG+ +NS
Sbjct: 394  NSSAKKAVLLSGTPGIGKTTSAKLVSQMLGFQTIEVNASDSRGKADSKIEKGIGGSNANS 453

Query: 1679 IKELVSNVALDSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXND 1858
            IKELVSN AL   +D  K PK+VLIMDEVDGMSAGDRGGVADL               ND
Sbjct: 454  IKELVSNKALS--MDGLKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPVICICND 511

Query: 1859 RYSQKLKSLVNYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMA 2038
            RYSQKLKSLVNYCL L+FRKPTKQQMAKRL QIA+AEGL++NEIALEELAE+V+GDMRMA
Sbjct: 512  RYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMA 571

Query: 2039 INQLQYMSISQLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMS 2218
            +NQLQYMS+S  VI YDD+R+RLLSSAKDEDISPFTAVDKLFGFN GKLRMDER+DLSMS
Sbjct: 572  VNQLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMS 631

Query: 2219 DPDLVPLIVQENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLS 2398
            DPDLVPL++QENY+NYRPSS  +DD+G+KRMNL+A AAESIG+GDIFNVQIR+YRQWQLS
Sbjct: 632  DPDLVPLLIQENYINYRPSSAVKDDSGIKRMNLIAHAAESIGNGDIFNVQIRKYRQWQLS 691

Query: 2399 QSSSFASCIIPAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            QS+  +S I PAAL+ GQRETLE GERNFNRFGGWLGKNST GKN RLL+D+H
Sbjct: 692  QSACLSSSIFPAALLRGQRETLEQGERNFNRFGGWLGKNSTLGKNSRLLEDLH 744


>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
            gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
            Full=Replication factor C subunit 1; Short=AtRFC1;
            AltName: Full=Activator 1 large subunit; AltName:
            Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
            replication factor C large subunit-like protein
            [Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
            At5g22010 [Arabidopsis thaliana]
            gi|332005585|gb|AED92968.1| replication factor C1
            [Arabidopsis thaliana]
          Length = 956

 Score =  825 bits (2132), Expect = 0.0
 Identities = 457/763 (59%), Positives = 527/763 (69%), Gaps = 6/763 (0%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATASSKPAVASQKTPNSPNTEKPNPVQVTQ-----ENSERRKTSKY 451
            SDIRKWFMK H+KG    S P   S K     N  +  P++  Q     E ++RRKTSKY
Sbjct: 2    SDIRKWFMKAHEKGN--GSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKY 59

Query: 452  FAPSSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXX 631
            F         +T +K+EK     P+KRK +  S+D+    KP   K +K VDDD DDF  
Sbjct: 60   FGKD------KTKVKDEKEVEAIPAKRKLKTESDDLV---KPRPRKVTKVVDDDDDDFDV 110

Query: 632  XXXXXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXX 811
                                    S  K  DN DD+ + +D ETP+K             
Sbjct: 111  PISRKTRDTTPSKKLKSGSGRGIAS--KTVDN-DDDDDGEDKETPLKSAGRGRGGRAAPG 167

Query: 812  XXXXXXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAE 988
                          FMNFGERKDPPHKGEKEVPEG PDCLAG TFV+SGTLDSLEREEAE
Sbjct: 168  ASTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVISGTLDSLEREEAE 227

Query: 989  DLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKT 1168
            DLIKRHGGRIT +VSKKT++LL DED+GGRKS KAKELG  FLTEDGLFD+IR SKP K 
Sbjct: 228  DLIKRHGGRITGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDIIRSSKPVKK 287

Query: 1169 PKKEEQNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQS 1348
               E  NK T +         +P K    +    G K +AK     + P K K K  +++
Sbjct: 288  SLPERSNKGTEK-------ICAPPKTSPQKEETRG-KPLAKSSPKKVPPAKGKNKI-IET 338

Query: 1349 PLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLL 1528
             L WT+KYRPKVP +I+GNQS+V QLH+WL HW DQF   G               AVLL
Sbjct: 339  SLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKAVLL 398

Query: 1529 SGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVAL 1708
            SG+PGIGK+TSAKLVSQMLGFQAVEVNASDSRGKA++ I KG+GG+ +NS+KELV+N A+
Sbjct: 399  SGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANSVKELVNNEAM 458

Query: 1709 DSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLV 1888
             +  D SK PK+VLIMDEVDGMSAGDRGGVADL               NDRYSQKLKSLV
Sbjct: 459  AANFDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLV 518

Query: 1889 NYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSIS 2068
            NYCL LN+RKPTKQQMAKRL  IA AEGL+INEIALEELAERV+GD+R+A+NQLQYMS+S
Sbjct: 519  NYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLS 578

Query: 2069 QLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQ 2248
              VI YDDIR+RLLSSAKDEDISPFTAVDKLFG+NGGKLRMDERIDLSMSDPDLVPL++Q
Sbjct: 579  MSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQ 638

Query: 2249 ENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCII 2428
            ENY+NYRPS  G+D+   KRM+LLA AAESI DGDI NVQIRRYRQWQLSQS   AS I+
Sbjct: 639  ENYLNYRPS--GKDE--AKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSIL 694

Query: 2429 PAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            PA+L+HG RE LE GERNFNRFGGWLGKNST GKN RL++D+H
Sbjct: 695  PASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLH 737


>ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297319877|gb|EFH50299.1| AAA-type ATPase family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 960

 Score =  825 bits (2130), Expect = 0.0
 Identities = 456/764 (59%), Positives = 532/764 (69%), Gaps = 7/764 (0%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATASSKPAVASQKTPNSPNTEKPNPVQVTQ-----ENSERRKTSKY 451
            SDIRKWFMK H+KG   +S P   S K   + N  +  P++  Q     E + RRKTSK+
Sbjct: 2    SDIRKWFMKAHEKGN--ASAPKSTSSKAGPARNAAETAPLKSEQASEDLETAARRKTSKF 59

Query: 452  FAPSSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXX 631
            F         +T +K+EK   + P+KRK +  S+D+A   KP   K +K VDDD DD   
Sbjct: 60   FGKD------KTKVKDEKEVEEIPAKRKLKTDSDDLA---KPRPRKVTKVVDDDDDDDFD 110

Query: 632  XXXXXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEIND-KDPETPVKXXXXXXXXXXXX 808
                               +    +S  V ++ DD+  D +D ETP+K            
Sbjct: 111  VPISRKTRDSTPSKKLKSGSGRGIASKTVDNDEDDDGEDAQDKETPLKAAGRGRGGRAAP 170

Query: 809  XXXXXXXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEA 985
                           FMNFGERKDPPHKGEKEVPEG PDCLAG TFV+SGTLDSLEREEA
Sbjct: 171  GASTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVISGTLDSLEREEA 230

Query: 986  EDLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAK 1165
            EDLIKRHGGRIT +VSKKT++LL DED+GGRKS KAKELG  FLTEDGLFDMIR SKP K
Sbjct: 231  EDLIKRHGGRITGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPVK 290

Query: 1166 TPKKEEQNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQ 1345
                E  NK T +         +P K    +    G K +AK     + P K K K  ++
Sbjct: 291  KSLPERTNKGTEK-------ICAPPKTSPQKEETRG-KPLAKSSPNKVPPAKGKKKI-IE 341

Query: 1346 SPLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVL 1525
            + L WT+KYRPKVP +I+GNQS+V QLH+WL HW DQF   G               AVL
Sbjct: 342  TSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGAKKAVL 401

Query: 1526 LSGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVA 1705
            LSG+PGIGK+TSAKLVSQMLGFQAVEVNASDSRGKA++ I KG+GG+ +N++KELV+N A
Sbjct: 402  LSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEA 461

Query: 1706 LDSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSL 1885
            + + LD SK PK+VLIMDEVDGMSAGDRGGVADL               NDRYSQKLKSL
Sbjct: 462  MAANLDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSL 521

Query: 1886 VNYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSI 2065
            VNYCL LN+RKPTKQQMAKRL  IA AEGL+INEIALEELAERV+GD+R+A+NQLQYMS+
Sbjct: 522  VNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLALNQLQYMSL 581

Query: 2066 SQLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIV 2245
            S   I YDDIR+RLLSSAKDEDISPFTAVDKLFG+NGGKLRMDERIDLSMSDPDLVPL++
Sbjct: 582  SMSAIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLI 641

Query: 2246 QENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCI 2425
            QENY+NYRPS  G+D+   KRM+LLALAAESI DGDI NVQIRRYRQWQLSQS   AS I
Sbjct: 642  QENYLNYRPS--GKDE--AKRMDLLALAAESIADGDIINVQIRRYRQWQLSQSCCVASSI 697

Query: 2426 IPAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            +PA+L+HG RE LE GERNFNRFGGWLGKNST GKN RL++D+H
Sbjct: 698  LPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLH 741


>ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Glycine
            max]
          Length = 947

 Score =  818 bits (2112), Expect = 0.0
 Identities = 452/759 (59%), Positives = 522/759 (68%), Gaps = 2/759 (0%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATA-SSKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSKYFAPS 463
            SDIRKWFMK HDKG  A SSKP+  +Q  P+S   +    V   QE+S RR TSKYF  +
Sbjct: 2    SDIRKWFMKTHDKGNNAASSKPS--NQPKPSSDKPQSEKTVAGGQESSGRRITSKYFNSN 59

Query: 464  SKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXXXXXX 643
             ++       K++K   + P+KRK  K SE+I        P+  K  +DD DD       
Sbjct: 60   KQKG------KDKKEMQELPAKRKNMKDSEEI--------PEPKKIHEDDGDDSVLPTNK 105

Query: 644  XXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXXXXXX 823
                           +              DE +DKD  +  K                 
Sbjct: 106  KKLADTTPTKKLKSGSGRGLPQKSAVLEESDEDDDKDAVSAAKSAGRGDGGRGAPGRSTS 165

Query: 824  XXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAEDLIK 1000
                      FMNFGERKDPPHKGEKEVPEGAPDCLAG TFV+SGTLDSLEREEAEDLIK
Sbjct: 166  GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIK 225

Query: 1001 RHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTPKKE 1180
            RHGGR+T +VSKKT++LL DED+GGRKS KAK+LG  FLTEDGLFDMIR SKPAK P +E
Sbjct: 226  RHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKQLGTSFLTEDGLFDMIRGSKPAKAPSQE 285

Query: 1181 EQNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQSPLTW 1360
            +  KK   K       +S SKV       L  +  +   KP       KT + VQS L W
Sbjct: 286  D--KKPVNKA---VAVASQSKVSPKSQVPLSSRSPSNQAKP-------KTATTVQSSLMW 333

Query: 1361 TDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLLSGSP 1540
            T+KYRPK P DIIGNQS+V QL +WL  W++ FL  G               AVLLSG+P
Sbjct: 334  TEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTP 393

Query: 1541 GIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVALDSGL 1720
            GIGK+TSA LV Q LGFQA+EVNASDSRGKAD+KI KG+ G+ +NS+KELV+N A+   +
Sbjct: 394  GIGKTTSATLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGINM 453

Query: 1721 DWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCL 1900
              SK  KSVLIMDEVDGMSAGDRGGVADL               NDRYSQKLKSLVNYCL
Sbjct: 454  GRSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCL 513

Query: 1901 ALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSISQLVI 2080
             L+FRKPTKQQMAKRL  +A AE LQ+NEIALEELAERV+GDMRMA+NQLQYMS+S  +I
Sbjct: 514  LLSFRKPTKQQMAKRLMDVAKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSII 573

Query: 2081 NYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENYV 2260
            NYDDIR+R L++AKDEDISPFTAVDKLFGFN GKL+MDERI+LSMSDPDLVPLI+QENY+
Sbjct: 574  NYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYI 633

Query: 2261 NYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAAL 2440
            NYRPS  G+DD+G+KRMNL+A AAESI DGDI NVQIRRYRQWQLSQ+SS A+ IIPA+L
Sbjct: 634  NYRPSMAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSVATSIIPASL 693

Query: 2441 MHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            +HGQRE LE GERNFNRFGGWLGKNST GKNLRLLDD+H
Sbjct: 694  LHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLH 732


>ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutrema salsugineum]
            gi|557101796|gb|ESQ42159.1| hypothetical protein
            EUTSA_v10012587mg [Eutrema salsugineum]
          Length = 962

 Score =  816 bits (2109), Expect = 0.0
 Identities = 453/764 (59%), Positives = 524/764 (68%), Gaps = 7/764 (0%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATA------SSKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSK 448
            SDIRKWFMK H+KG  +      S   AV S     S  +E+ +     QE++ RRKTSK
Sbjct: 2    SDIRKWFMKAHEKGNGSAPNRLLSKAVAVTSAAETASIKSEQASE---DQESAARRKTSK 58

Query: 449  YFAPSSKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFX 628
            YF         +TI K+EK   + P+KRK +  S+D+ +      P+++  VDDD DDF 
Sbjct: 59   YFGKD------KTIAKDEKEVGEIPAKRKLKTDSDDLGKSR----PRKAIKVDDDDDDFE 108

Query: 629  XXXXXXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXX 808
                                     S     D  DD  + ++ ETP+K            
Sbjct: 109  VPNSRKTRDSTPSKKLKSGSGRGVTSKAVDIDEDDDGEDAQEKETPLKSGGRGRGGRAAS 168

Query: 809  XXXXXXXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEA 985
                           FMNFGERKDPPHKGEKEVPEG PDCLAG TFV+SGTLDSLEREEA
Sbjct: 169  GASTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGNPDCLAGLTFVISGTLDSLEREEA 228

Query: 986  EDLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAK 1165
            EDLIKRHGGR+T +VSKKT++LL DED+GGRKS KAKELG  FLTEDGLFDMIR SKP K
Sbjct: 229  EDLIKRHGGRVTGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPVK 288

Query: 1166 TPKKEEQNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQ 1345
                E  NK T +    L      S  K +    L  K     V P   P K K K  +Q
Sbjct: 289  KSLPERTNKGTEKVSAQLKI----SPQKEETRGKLVAKISPNKVPPHSSPAKAKKKI-IQ 343

Query: 1346 SPLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVL 1525
            + L WT+KYRPKVP +I+GNQS+V QLH+WL HW DQF   G               AVL
Sbjct: 344  TSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGAKKAVL 403

Query: 1526 LSGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVA 1705
            +SG+PGIGK+TSAKLVSQMLGFQAVEVNASDSRGKA++ I KG+GG+ +N++KELV+N A
Sbjct: 404  MSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEA 463

Query: 1706 LDSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSL 1885
            + + +D SK PK+VLIMDEVDGMSAGDRGGVADL               NDRYSQKLKSL
Sbjct: 464  IAANIDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSL 523

Query: 1886 VNYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSI 2065
            VNYCL LNFRKPTKQQMAKRL  IA AEGL++NEIALEELAERV+GD+R+A+NQLQYMS+
Sbjct: 524  VNYCLPLNFRKPTKQQMAKRLTHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSL 583

Query: 2066 SQLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIV 2245
            S  VI YDDIR+RLLSSAKDEDISPFTAVDKLFG+NGGKLRMDERIDLSMSD DLVPL+V
Sbjct: 584  SMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDFDLVPLLV 643

Query: 2246 QENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCI 2425
            QENY+NYRPSS G+D+   KRM LLA AAESI DGDI NVQIRR+RQWQLS SS  AS I
Sbjct: 644  QENYLNYRPSSTGKDE--AKRMELLARAAESIADGDIINVQIRRHRQWQLSLSSCVASSI 701

Query: 2426 IPAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            +PA+L+HG RE LE GERNFNRFGGWLGKNST GKN RLL+D+H
Sbjct: 702  LPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNTRLLEDLH 745


>ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Glycine
            max]
          Length = 949

 Score =  815 bits (2104), Expect = 0.0
 Identities = 453/761 (59%), Positives = 523/761 (68%), Gaps = 4/761 (0%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATA-SSKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSKYFAPS 463
            SDIRKWFMK HDKG  A SSKP+  +Q  P+S   +    V   QE+S RR TSKYF  +
Sbjct: 2    SDIRKWFMKTHDKGNNAASSKPS--NQPKPSSDKPQSEKTVAGGQESSGRRITSKYFNSN 59

Query: 464  SKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXXXXXX 643
             ++       K++K   + P+KRK  K SE+I        P+  K  +DD DD       
Sbjct: 60   KQKG------KDKKEMQELPAKRKNMKDSEEI--------PEPKKIHEDDGDDSVLPTNK 105

Query: 644  XXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXXXXXX 823
                           +              DE +DKD  +  K                 
Sbjct: 106  KKLADTTPTKKLKSGSGRGLPQKSAVLEESDEDDDKDAVSAAKSAGRGDGGRGAPGRSTS 165

Query: 824  XXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAEDLIK 1000
                      FMNFGERKDPPHKGEKEVPEGAPDCLAG TFV+SGTLDSLEREEAEDLIK
Sbjct: 166  GRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIK 225

Query: 1001 RHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTPKKE 1180
            RHGGR+T +VSKKT++LL DED+GGRKS KAK+LG  FLTEDGLFDMIR SKPAK P +E
Sbjct: 226  RHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKQLGTSFLTEDGLFDMIRGSKPAKAPSQE 285

Query: 1181 EQNKKTSEKMHILYTTSSPSKV--KHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQSPL 1354
            +  KK   K       +S SKV  K      L  +  +   KP       KT + VQS L
Sbjct: 286  D--KKPVNKA---VAVASQSKVSPKSQVKVPLSSRSPSNQAKP-------KTATTVQSSL 333

Query: 1355 TWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLLSG 1534
             WT+KYRPK P DIIGNQS+V QL +WL  W++ FL  G               AVLLSG
Sbjct: 334  MWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSG 393

Query: 1535 SPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVALDS 1714
            +PGIGK+TSA LV Q LGFQA+EVNASDSRGKAD+KI KG+ G+ +NS+KELV+N A+  
Sbjct: 394  TPGIGKTTSATLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGI 453

Query: 1715 GLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNY 1894
             +  SK  KSVLIMDEVDGMSAGDRGGVADL               NDRYSQKLKSLVNY
Sbjct: 454  NMGRSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNY 513

Query: 1895 CLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSISQL 2074
            CL L+FRKPTKQQMAKRL  +A AE LQ+NEIALEELAERV+GDMRMA+NQLQYMS+S  
Sbjct: 514  CLLLSFRKPTKQQMAKRLMDVAKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMS 573

Query: 2075 VINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQEN 2254
            +INYDDIR+R L++AKDEDISPFTAVDKLFGFN GKL+MDERI+LSMSDPDLVPLI+QEN
Sbjct: 574  IINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQEN 633

Query: 2255 YVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPA 2434
            Y+NYRPS  G+DD+G+KRMNL+A AAESI DGDI NVQIRRYRQWQLSQ+SS A+ IIPA
Sbjct: 634  YINYRPSMAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSVATSIIPA 693

Query: 2435 ALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            +L+HGQRE LE GERNFNRFGGWLGKNST GKNLRLLDD+H
Sbjct: 694  SLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLH 734


>ref|XP_006663537.1| PREDICTED: replication factor C subunit 1-like [Oryza brachyantha]
          Length = 1061

 Score =  814 bits (2103), Expect = 0.0
 Identities = 455/811 (56%), Positives = 531/811 (65%), Gaps = 53/811 (6%)
 Frame = +2

Query: 284  SSDIRKWFMKQHDK----------GATASSKPAVASQKTPNSPNTEKPNPVQVTQENSER 433
            SSDIRKWFMK  DK          G  A++ PA A +   + P    P+     Q+ S R
Sbjct: 43   SSDIRKWFMKAQDKNGGAAKPAGVGGAAAAAPA-AKKPVLSIPEKPAPSLAPCDQDCSAR 101

Query: 434  RKTSKYFAPSSKE----------------------------VNPQTIIKEEK-------V 508
            RKTSKYFA  ++E                            + P    ++E         
Sbjct: 102  RKTSKYFASKTEEEDASAGNGAGRGLSKRKLQKGSDELEDDMKPLRATEQEDDDDFMAPS 161

Query: 509  AAKTPSKRKPQKSSEDI--AEDSKPTLPKRSKTVDDDHDDFXXXXXXXXXXXXXXXXXXX 682
              KTP K+ P K  +    AE    T+   +   +D  D+                    
Sbjct: 162  KRKTPVKQPPSKKLKGASNAETHAKTVGLDNDDKEDKMDEDAKTPSKAAGSGRGRGRGRG 221

Query: 683  XVTEMTKSSHKVGDNLDDEIN----DKDPETPVKXXXXXXXXXXXXXXXXXXXXXXXXXX 850
                   ++H     LDD+      D+D +TP K                          
Sbjct: 222  RGGRGAGAAHGKAVGLDDDGEEDRMDEDAKTPSKSTGRGRGGASGGRGRGGGGRG----- 276

Query: 851  FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAEDLIKRHGGRITSAV 1030
            FMNFGERKDPPHKGEKEVPEGAPDCL G TFV+SGTLDSLEREEA DLIKR+GGR+T ++
Sbjct: 277  FMNFGERKDPPHKGEKEVPEGAPDCLTGLTFVISGTLDSLEREEATDLIKRYGGRVTGSI 336

Query: 1031 SKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTPKKEEQNKKTSEKM 1210
            SKKTS+LLADEDVGG KS+KAKELG+PFLTEDGLFDMIRKSKPAK+   + Q+   SEK 
Sbjct: 337  SKKTSYLLADEDVGGVKSNKAKELGVPFLTEDGLFDMIRKSKPAKSTVAKHQSDNNSEKQ 396

Query: 1211 HILYTTSSPSKVKHDQASAL--GRKEVAKGVKPCIYPDKRKTKSGVQSPLTWTDKYRPKV 1384
                  S P KV+   A+ +  G+    K  K  +  D +K K   +  + WT+KYRPKV
Sbjct: 397  QKSPIKSCPVKVERKDANQITTGKNISPKSNKERVSTDNQKAKIIDRGSMQWTEKYRPKV 456

Query: 1385 PADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLLSGSPGIGKSTSA 1564
            P DI+GNQS+VKQLHDWL  WDDQFLH+GQ              AVLLSG PGIGK+T+A
Sbjct: 457  PNDIVGNQSMVKQLHDWLKGWDDQFLHSGQKGKGKKQSDGGSKKAVLLSGPPGIGKTTTA 516

Query: 1565 KLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVALDSGLDWSKPPKS 1744
            K+VSQMLG QA+EVNASDSRGKAD+KI +GVGG+TSNSIKEL+SNV L+   + SK PK+
Sbjct: 517  KVVSQMLGLQAIEVNASDSRGKADSKIERGVGGSTSNSIKELISNVTLNYSNNRSKQPKA 576

Query: 1745 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLALNFRKPT 1924
            VL+MDEVDGMSAGDRGGVADL               NDRYSQKLKSLVNYCL LNFRKPT
Sbjct: 577  VLVMDEVDGMSAGDRGGVADLIASIKISKIPIVCICNDRYSQKLKSLVNYCLLLNFRKPT 636

Query: 1925 KQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSISQLVINYDDIRKR 2104
            KQQM KRL +IA  EGLQ  E A+EELAERV GD+RMA+N LQYMS+SQ V+ YDDIR+R
Sbjct: 637  KQQMGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIRQR 696

Query: 2105 LLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENYVNYRPSSIG 2284
            L SS KDEDISPFTAVDKLFGFNGG+LRMDERIDLSMSDPDLVPLI+QENY+NYRP ++G
Sbjct: 697  LSSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPITVG 756

Query: 2285 RDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAALMHGQRETL 2464
            +DD+GVKRMN LA AAESI DGDI NVQIRRYRQWQLSQ++  +S I+PAALMHG RE L
Sbjct: 757  KDDSGVKRMNFLARAAESIADGDIVNVQIRRYRQWQLSQAACLSSSIVPAALMHGNREIL 816

Query: 2465 EPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            E GERNFNRFGGWLGK STT KN RLL+D H
Sbjct: 817  EAGERNFNRFGGWLGKYSTTNKNKRLLEDAH 847


>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 981

 Score =  814 bits (2102), Expect = 0.0
 Identities = 445/765 (58%), Positives = 525/765 (68%), Gaps = 9/765 (1%)
 Frame = +2

Query: 290  DIRKWFMKQHDKGATASSKPAV-ASQKTPNSPNTEKPNPVQVTQENSERRKTSKYFAPSS 466
            DIRKWFMK HDK   + SK A  A      S +  K  P     E++ R+ TSKYFA   
Sbjct: 3    DIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSASAGKTGPSG--GESAGRQITSKYFASEK 60

Query: 467  KEVNPQT-------IIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDF 625
            +E            I K  +   ++P+KRK QK +E   E  K +  K+S  VDD+ DD 
Sbjct: 61   QEAKDAEETEVLPIIRKSPRDTKESPAKRKFQKYNE---ESPKASPLKKSNKVDDNDDDA 117

Query: 626  XXXXXXXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXX 805
                                 +    +   V     D+   K  ++ +K           
Sbjct: 118  VLSSSKKNMSEVTPNKKLKSGSGKGITQKPVEIEASDDEETKGTDSSLKPSGRGRGGKGS 177

Query: 806  XXXXXXXXXXXXXXX-FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREE 982
                            FMNFGERKDPPHKGEKEVPEGAPDCLAG TFV+SGTLDSLEREE
Sbjct: 178  SAATIGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREE 237

Query: 983  AEDLIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPA 1162
            AEDLIKRHGGR+T +VSKKT++LL DED+GGRKSSKAKELG  FLTEDGLFDMIR S   
Sbjct: 238  AEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASGKK 297

Query: 1163 KTPKKEEQNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKSGV 1342
              P+++        K  ++ +  SP+K    +  A   K++A G  P     K+K+ +  
Sbjct: 298  APPRQDP-------KKSVVKSEESPTKKNFQKVQAKSHKDLAAGASPA----KQKSGTAE 346

Query: 1343 QSPLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAV 1522
             S LTWT+KYRPKVP DIIGNQS+VKQLHDWL HW++ FL  G               AV
Sbjct: 347  FSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAV 406

Query: 1523 LLSGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNV 1702
            LL G PGIGK+TSAKLVSQMLGF+A+EVNASD+RGK+D KI KG+GG+ +NSIKEL+SN 
Sbjct: 407  LLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNE 466

Query: 1703 ALDSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKS 1882
            +L   ++  K  K+VLIMDEVDGMSAGDRGGVADL               NDRYSQKLKS
Sbjct: 467  SLHFKMNQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKS 526

Query: 1883 LVNYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMS 2062
            LVNYCL L+FRKPTKQQMAKRL Q+A+AEGLQ+NEIALEELAERV+GDMRMA+NQLQY+S
Sbjct: 527  LVNYCLILSFRKPTKQQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLS 586

Query: 2063 ISQLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLI 2242
            +S  VI YDDIR+RLLSS KDEDISPFTAVDKLFGFN GKLRMDERIDLSMSD DLVPL+
Sbjct: 587  LSMSVIKYDDIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLL 646

Query: 2243 VQENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASC 2422
            +QENY+NYRPS++ +DD G+KRM+L+A AAESI DGDI NVQIRR+RQWQLSQSS  ASC
Sbjct: 647  IQENYINYRPSAVSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASC 706

Query: 2423 IIPAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            IIPA+L+HGQRETLE  ERNFNRFG WLGKNST GKN+RLL+D+H
Sbjct: 707  IIPASLLHGQRETLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLH 751


>gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus vulgaris]
          Length = 938

 Score =  813 bits (2101), Expect = 0.0
 Identities = 448/758 (59%), Positives = 524/758 (69%), Gaps = 1/758 (0%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATAS-SKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSKYFAPS 463
            SDIRKWFMK HDKG  A+ SKP+  +Q  P+S   +    V   QE+S RR TSKYF  +
Sbjct: 2    SDIRKWFMKSHDKGNNAAPSKPS--NQPKPSSDKPQPEKNVAGGQESSGRRVTSKYFNTN 59

Query: 464  SKEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDSKPTLPKRSKTVDDDHDDFXXXXXX 643
             ++V      KEEK   + P+KRK  K SED  E      PKR    +D  DD       
Sbjct: 60   KQKV------KEEKETQELPAKRKNVKDSEDTPE------PKRVH--EDVGDDSVLPTNK 105

Query: 644  XXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXXXXXX 823
                           +        V     DE +DK   + VK                 
Sbjct: 106  KKLAEATPTKKLKSGSGRGIPKKSVVLEESDEDDDKGAVSAVKSAGRGGGGRGAPGRGRG 165

Query: 824  XXXXXXXXXFMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAEDLIKR 1003
                     FMNFGERKDPPHKGEKEVPEGAP+CLAG TFV+SGTLDSLEREEAEDLIKR
Sbjct: 166  GGRGG----FMNFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKR 221

Query: 1004 HGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTPKKEE 1183
            HGGR+T +VSKKT++LL DED+GGRKS KAKELG  FLTEDGLFDMIR SKPAK+P + E
Sbjct: 222  HGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKSPSQAE 281

Query: 1184 QNKKTSEKMHILYTTSSPSKVKHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQSPLTWT 1363
              KK   K   +    SP  +     S+    + AK V            + ++S + WT
Sbjct: 282  --KKPVNKAVAVAPKVSPKPLVKVPLSSRSPSKQAKPV----------AATTIESSVMWT 329

Query: 1364 DKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVLLSGSPG 1543
            +KYRPK P DIIGNQS++ QL +WL  W++QF   G               AVLLSG+PG
Sbjct: 330  EKYRPKDPKDIIGNQSLIVQLRNWLKAWNEQFSDTGNKKKGKKQNDSVLKKAVLLSGTPG 389

Query: 1544 IGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVALDSGLD 1723
            IGK+TSAKLV + LGFQA+EVNASDSRGKAD+KI KG+ G+ +NS+KELV+N ++ + ++
Sbjct: 390  IGKTTSAKLVCEQLGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNESIGANME 449

Query: 1724 WSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLA 1903
             SK  KSVLIMDEVDGMSAGDRGGVADL               NDRYSQKLKSLVNYCL 
Sbjct: 450  RSKISKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLL 509

Query: 1904 LNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSISQLVIN 2083
            L+FRKPTKQQMAKRL  +A AEGLQ+NEIALEELAERV+GD+RMA+NQLQYMS+S  VIN
Sbjct: 510  LSFRKPTKQQMAKRLMDVAKAEGLQVNEIALEELAERVNGDVRMAVNQLQYMSLSMSVIN 569

Query: 2084 YDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIVQENYVN 2263
            YDDIR+R L++AKDEDISPFTAVDKLFGFN GKLRMDERI+LSMSDPDLVPL++QENY+N
Sbjct: 570  YDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLRMDERINLSMSDPDLVPLLIQENYIN 629

Query: 2264 YRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCIIPAALM 2443
            Y+PS  G+DDNG+KRMNL+A AAESI DGDI NVQIRRYRQWQLSQ+S  A+CIIPA+L+
Sbjct: 630  YKPSLAGKDDNGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQASCTATCIIPASLL 689

Query: 2444 HGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            HGQRE LE GERNFNRFGGWLGKNST GKN RLLDD+H
Sbjct: 690  HGQREILEQGERNFNRFGGWLGKNSTMGKNFRLLDDLH 727


>ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
          Length = 938

 Score =  810 bits (2091), Expect = 0.0
 Identities = 455/764 (59%), Positives = 527/764 (68%), Gaps = 7/764 (0%)
 Frame = +2

Query: 287  SDIRKWFMKQHDKGATASSKPAVASQKTPNSPNTEKPNPVQVTQENSERRKTSKYFAPSS 466
            SDIRKWFMK HDKG  A+S     S+ + + P +EK   V   QE+S RR TSKYF  + 
Sbjct: 2    SDIRKWFMKTHDKGNNAAS-----SKPSSDKPQSEKT--VAGGQESSGRRITSKYFNSNK 54

Query: 467  KEVNPQTIIKEEKVAAKTPSKRKPQKSSEDIAEDS--KPTLPKRSKTVDDDHDDFXXXXX 640
            ++       K+EK   + P+KRK  K SE+I ED      LP   K + D          
Sbjct: 55   QKG------KDEKEKQELPAKRKNAKDSEEIHEDDGDDSVLPTNKKKLADTTPTKKLKSG 108

Query: 641  XXXXXXXXXXXXXXXVTEMTKSSHKVGDNLDDEINDKDPETPVKXXXXXXXXXXXXXXXX 820
                              + K S  + ++  DE +DKD  +  K                
Sbjct: 109  SGRG--------------IPKKSAVLEES--DEDDDKDAVSAAKSAGRGGGGGGRGAPGR 152

Query: 821  XXXXXXXXXX---FMNFGERKDPPHKGEKEVPEGAPDCLAGQTFVLSGTLDSLEREEAED 991
                         FMNFGERKDPPHKGEKEVPEGAPDCLAG TFV+SGTLDSLEREEAED
Sbjct: 153  STGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAED 212

Query: 992  LIKRHGGRITSAVSKKTSFLLADEDVGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAKTP 1171
            LIKRHGGR+T +VSKKT++LL DED+GGRKS KAKELG  FLTEDGLFDMIR SKPAK  
Sbjct: 213  LIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKAS 272

Query: 1172 KKEEQNKKTSEKMHILYTTSSPSKV--KHDQASALGRKEVAKGVKPCIYPDKRKTKSGVQ 1345
             +E+  KK   K       +S SKV  K      L  +  +K  KP       KT + VQ
Sbjct: 273  SQED--KKLVNKA---VAVASQSKVSPKSQVKVPLSSRSPSKQAKP-------KTATTVQ 320

Query: 1346 SPLTWTDKYRPKVPADIIGNQSIVKQLHDWLMHWDDQFLHAGQXXXXXXXXXXXXXXAVL 1525
            S   WT+KYRPK P DIIGNQS+V QL +WL  W++ FL  G               AVL
Sbjct: 321  SSSMWTEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVL 380

Query: 1526 LSGSPGIGKSTSAKLVSQMLGFQAVEVNASDSRGKADTKIVKGVGGNTSNSIKELVSNVA 1705
            LSG+PGIGK+TSAKLV Q LGFQA+EVNASDSRGKAD+KI KG+ G+ +NS+KELV+N A
Sbjct: 381  LSGTPGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEA 440

Query: 1706 LDSGLDWSKPPKSVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSL 1885
            +   ++ SK  KSVLIMDEVDGMSAGDRGGVADL               NDRYSQKLKSL
Sbjct: 441  IGVNMERSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSL 500

Query: 1886 VNYCLALNFRKPTKQQMAKRLKQIADAEGLQINEIALEELAERVSGDMRMAINQLQYMSI 2065
            VNYCL L+FRKPTKQQMAKRL  ++ AE LQ+NEIALEELAERV+GDMRMA+NQLQYMS+
Sbjct: 501  VNYCLLLSFRKPTKQQMAKRLMDVSKAERLQVNEIALEELAERVNGDMRMALNQLQYMSL 560

Query: 2066 SQLVINYDDIRKRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLIV 2245
            S  VINYDDIR+R L++AKDEDISPFTAVDKLFGFN GKL+MDERI+LSMSDPDLVPLI+
Sbjct: 561  SMSVINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLII 620

Query: 2246 QENYVNYRPSSIGRDDNGVKRMNLLALAAESIGDGDIFNVQIRRYRQWQLSQSSSFASCI 2425
            QENY+NYRPS  G+DD+G+KRMNL+A AAESI DGDI NVQIRRYRQWQLSQ+SS A+ I
Sbjct: 621  QENYINYRPSLAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSLATSI 680

Query: 2426 IPAALMHGQRETLEPGERNFNRFGGWLGKNSTTGKNLRLLDDVH 2557
            IPA+L+HGQRE LE GERNFNRFGGWLGKNST GKNLRLLDD+H
Sbjct: 681  IPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLH 724