BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00012310
         (717 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006655361.1| PREDICTED: pentatricopeptide repeat-containi...   345   6e-93
ref|XP_004961943.1| PREDICTED: pentatricopeptide repeat-containi...   344   1e-92
gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indi...   341   1e-91
ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group] g...   341   1e-91
ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [S...   340   3e-91
gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japo...   340   4e-91
ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containi...   337   2e-90
gb|ACN27578.1| unknown [Zea mays] gi|414586292|tpg|DAA36863.1| T...   334   2e-89
gb|EMJ28472.1| hypothetical protein PRUPE_ppa017736mg [Prunus pe...   318   1e-84
ref|XP_002516590.1| pentatricopeptide repeat-containing protein,...   315   7e-84
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi...   314   2e-83
gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis]     313   3e-83
ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containi...   313   5e-83
ref|XP_004247963.1| PREDICTED: pentatricopeptide repeat-containi...   313   5e-83
ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Caps...   309   5e-82
ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containi...   309   7e-82
ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containi...   308   1e-81
ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citr...   308   1e-81
ref|XP_006481440.1| PREDICTED: pentatricopeptide repeat-containi...   308   1e-81
ref|XP_002324255.1| pentatricopeptide repeat-containing family p...   308   1e-81

>ref|XP_006655361.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Oryza brachyantha]
          Length = 564

 Score =  345 bits (886), Expect = 6e-93
 Identities = 158/238 (66%), Positives = 197/238 (82%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+AHARLG MRKAR +FN MP +T+VSWTA++SGYT++  +S A+EAF  MQ+EG EPD
Sbjct: 191 LISAHARLGLMRKARALFNSMPNKTIVSWTAMVSGYTAVRNFSGAVEAFRSMQTEGFEPD 250

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           D+SIV+VLPACA LGALELG+WI+A+C KH +L +T ICN LMEMYAKCG IDQA Q+FD
Sbjct: 251 DVSIVTVLPACAQLGALELGRWIYAYCDKHGMLRRTHICNGLMEMYAKCGRIDQALQMFD 310

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  +DVISWST I GLA HG+A +A++LF EME + +VRPN ITF+G+LSACSHAGLVD
Sbjct: 311 GMTEKDVISWSTAIGGLAAHGKADEAVRLFNEMEKEGKVRPNGITFVGILSACSHAGLVD 370

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ +F  MK+VYG++P +EHYGC+VDLLGR G IRRA++LV  MP  PD  +WGSLL
Sbjct: 371 EGLSHFDRMKDVYGVEPGVEHYGCVVDLLGRLGQIRRALDLVRDMPMPPDAKVWGSLL 428



 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 37/275 (13%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           L  AH R      A  +F+++ E  +    A+I  Y+    + DA+  +  M      P 
Sbjct: 55  LCNAHGRAAH---AARVFSQVREPNLHLHNAMIKAYSQNHQHRDAVAVYVRMLRCPTFPP 111

Query: 535 D-------ISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNID 377
           D        +   +L AC  L ALELGK +HA   +        + N+L+EMY + G+++
Sbjct: 112 DGRAGGDRFTYPFLLKACGGLAALELGKQVHAHVVRSGCQSNAIVENSLIEMYTRAGDLE 171

Query: 376 QARQIFDSLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRV-------------- 239
            A ++FD +R RDV+SW+T+IS  A  G    A  LF  M N T V              
Sbjct: 172 LAHKVFDGMRDRDVVSWNTLISAHARLGLMRKARALFNSMPNKTIVSWTAMVSGYTAVRN 231

Query: 238 ----------------RPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYG 107
                            P+ ++ + +L AC+  G ++ G ++  +  + +G+        
Sbjct: 232 FSGAVEAFRSMQTEGFEPDDVSIVTVLPACAQLGALELG-RWIYAYCDKHGMLRRTHICN 290

Query: 106 CMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
            ++++  + G I +A+++ +GM    DV  W + +
Sbjct: 291 GLMEMYAKCGRIDQALQMFDGMT-EKDVISWSTAI 324


>ref|XP_004961943.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Setaria italica]
          Length = 549

 Score =  344 bits (883), Expect = 1e-92
 Identities = 159/238 (66%), Positives = 198/238 (83%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+AHARLGQMR+AR +F+ MP++TVVSWTAL+SGYT++G ++ A+E F  MQ EG EPD
Sbjct: 190 LISAHARLGQMRRARALFDSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRLMQMEGFEPD 249

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           D+SIV+VLPACA LGALELG+WI+A+C+KH +L KT+ICNALMEMYAKCG IDQA Q+FD
Sbjct: 250 DVSIVAVLPACAQLGALELGRWIYAYCNKHDMLRKTYICNALMEMYAKCGCIDQALQLFD 309

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  +DVISWST I GLA HGRA +A+ LF  M+ + RVRPN +TF+GLLSACSHAGL+D
Sbjct: 310 GMPEKDVISWSTAIGGLAAHGRAREAVWLFEAMDREERVRPNGVTFVGLLSACSHAGLLD 369

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG++YF  MK  YG++P +EHYGC+VDLLGR+G I+RA+E V GMP   D  IWGSLL
Sbjct: 370 EGLRYFDRMKEAYGVEPGVEHYGCLVDLLGRSGRIQRALETVRGMPVPADAKIWGSLL 427



 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 69/276 (25%), Positives = 126/276 (45%), Gaps = 38/276 (13%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEM-------Q 557
           L  AH   G+   A  +F ++P+  +    A+I  Y     + DA+E +           
Sbjct: 53  LCNAH---GRAEHAARVFAQVPDPNLHLHNAMIKAYAQNHLHRDAVEVYVRTLRCLPLPS 109

Query: 556 SEGLEPDD-ISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNI 380
           S G    D  +   +L AC  L A+ELG+ +HA   +        + N+++EMY +CG++
Sbjct: 110 SGGFSGGDRFTYPFLLKACGGLAAVELGRQVHAHVVRSGCEAHDIVRNSMIEMYTRCGDL 169

Query: 379 DQARQIFDSLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRV------------- 239
             AR++FD +R +D +SW+T+IS  A  G+   A  LF  M + T V             
Sbjct: 170 SLARRVFDEMRNKDAVSWNTLISAHARLGQMRRARALFDSMPDKTVVSWTALVSGYTAVG 229

Query: 238 -----------------RPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHY 110
                             P+ ++ + +L AC+  G ++ G ++  +  N + +  +    
Sbjct: 230 DFAGAVEVFRLMQMEGFEPDDVSIVAVLPACAQLGALELG-RWIYAYCNKHDMLRKTYIC 288

Query: 109 GCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
             ++++  + GCI +A++L +GMP   DV  W + +
Sbjct: 289 NALMEMYAKCGCIDQALQLFDGMP-EKDVISWSTAI 323


>gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
          Length = 551

 Score =  341 bits (875), Expect = 1e-91
 Identities = 156/238 (65%), Positives = 197/238 (82%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+AHARLGQMRKA  +FN MP++T+V+WTA++SGYT++G Y  A++AF  MQ+EG EPD
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPD 250

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           D+SIV+VLPACA LGALELG+WI+A+C +H +L  T ICNALMEMYAKCG IDQA Q+FD
Sbjct: 251 DVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFD 310

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  +DVISWST+I GLA HGRA +A+ LF EME + +VRPN ITF+GLLSACS+AGLVD
Sbjct: 311 GMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD 370

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ +F  M +VYG++P +EHYGC+VDLLGR+G IRRA++LV  MP   D  +WGSLL
Sbjct: 371 EGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLL 428



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 37/275 (13%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           L  AH R+     A  +F ++ +  +    A+I  Y     + DA+  +  M      P 
Sbjct: 55  LCNAHRRVTH---AARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPP 111

Query: 535 D-------ISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNID 377
           D        +   +L AC    ALELGK +H    +        + N+L+EMY + G++ 
Sbjct: 112 DGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLA 171

Query: 376 QARQIFDSLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRV-------------- 239
            A ++FD +R RDV+SW+ +IS  A  G+   A  LF  M + T V              
Sbjct: 172 LAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGD 231

Query: 238 ----------------RPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYG 107
                            P+ ++ + +L AC+  G ++ G   ++  K  +G+        
Sbjct: 232 YPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKR-HGMLTSTHICN 290

Query: 106 CMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
            ++++  + GCI +A++L +GM    DV  W +++
Sbjct: 291 ALMEMYAKCGCIDQALQLFDGMA-DKDVISWSTVI 324


>ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
           gi|46981301|gb|AAT07619.1| putative pentatricopeptide
           repeat-containing protein [Oryza sativa Japonica Group]
           gi|215769333|dbj|BAH01562.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa
           Japonica Group]
          Length = 551

 Score =  341 bits (875), Expect = 1e-91
 Identities = 156/238 (65%), Positives = 197/238 (82%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+AHARLGQMRKA  +FN MP++T+V+WTA++SGYT++G Y  A++AF  MQ+EG EPD
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPD 250

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           D+SIV+VLPACA LGALELG+WI+A+C +H +L  T ICNALMEMYAKCG IDQA Q+FD
Sbjct: 251 DVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFD 310

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  +DVISWST+I GLA HGRA +A+ LF EME + +VRPN ITF+GLLSACS+AGLVD
Sbjct: 311 GMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD 370

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ +F  M +VYG++P +EHYGC+VDLLGR+G IRRA++LV  MP   D  +WGSLL
Sbjct: 371 EGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLL 428



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 37/275 (13%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           L  AH R+     A  +F ++ +  +    A+I  Y     + DA+  +  M      P 
Sbjct: 55  LCNAHRRVTH---AARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPP 111

Query: 535 D-------ISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNID 377
           D        +   +L AC    ALELGK +H    +        + N+L+EMY + G++ 
Sbjct: 112 DGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLA 171

Query: 376 QARQIFDSLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRV-------------- 239
            A ++FD +R RDV+SW+ +IS  A  G+   A  LF  M + T V              
Sbjct: 172 LAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGD 231

Query: 238 ----------------RPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYG 107
                            P+ ++ + +L AC+  G ++ G   ++  K  +G+        
Sbjct: 232 YPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKR-HGMLTSTHICN 290

Query: 106 CMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
            ++++  + GCI +A++L +GM    DV  W +++
Sbjct: 291 ALMEMYAKCGCIDQALQLFDGMA-DKDVISWSTVI 324


>ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
           gi|241937996|gb|EES11141.1| hypothetical protein
           SORBIDRAFT_06g023080 [Sorghum bicolor]
          Length = 547

 Score =  340 bits (872), Expect = 3e-91
 Identities = 155/238 (65%), Positives = 198/238 (83%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+AHAR+GQMRKAR +F+ MP++TVVSWTAL+SGYT++G ++ A+E F +MQ EG EPD
Sbjct: 189 LISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPD 248

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           D+SIV+VLPACA LGALELG+WI+A+C+KH +L K +ICNALMEMYAKCG I++A Q+F 
Sbjct: 249 DVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQLFH 308

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  +DVISWST I GLA HGRA +A+KLF  M+ + RV PN ITF+GLLSACSHAGL+D
Sbjct: 309 GMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLLD 368

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG++YF  MK  YG++P +EHYGC+VDLLGR+G I+RA++ + GMP  PD  IWGSLL
Sbjct: 369 EGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLL 426



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 39/269 (14%)
 Frame = -3

Query: 691 GQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEM--------QSEGLEPD 536
           G+   A  +F  +P   +    A+I  Y     + DA+E +  M         S G    
Sbjct: 56  GRAAHAARVFAHVPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVG 115

Query: 535 D-ISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIF 359
           D  +   +L AC  L A +LG+ +HA  ++        + N+L+EMY +CG++  AR++F
Sbjct: 116 DRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVF 175

Query: 358 DSLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRV-------------------- 239
           D +R +D +SW+T+IS  A  G+   A +LF  M + T V                    
Sbjct: 176 DGMREKDAVSWNTLISAHARMGQMRKARELFHSMPDKTVVSWTALVSGYTAVGDFAGAVE 235

Query: 238 ----------RPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYGCMVDLL 89
                      P+ ++ + +L AC+  G ++ G ++  +  N +G+  +I     ++++ 
Sbjct: 236 VFRQMQMEGFEPDDVSIVAVLPACAQLGALELG-RWIYAYCNKHGMLGKIYICNALMEMY 294

Query: 88  GRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
            + GCI  A++L +GM    DV  W + +
Sbjct: 295 AKCGCIEEALQLFHGMS-EKDVISWSTAI 322


>gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
          Length = 551

 Score =  340 bits (871), Expect = 4e-91
 Identities = 155/238 (65%), Positives = 196/238 (82%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+AHARLGQMRKA  +FN MP++T+V+WTA++SGYT++G Y  A++AF  MQ+EG EPD
Sbjct: 191 LISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPD 250

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           D+SIV+VLPACA LG LELG+WI+A+C +H +L  T ICNALMEMYAKCG IDQA Q+FD
Sbjct: 251 DVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFD 310

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  +DVISWST+I GLA HGRA +A+ LF EME + +VRPN ITF+GLLSACS+AGLVD
Sbjct: 311 GMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVD 370

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ +F  M +VYG++P +EHYGC+VDLLGR+G IRRA++LV  MP   D  +WGSLL
Sbjct: 371 EGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLL 428



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 37/275 (13%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           L  AH R+     A  +F ++ +  +    A+I  Y     + DA+  +  M      P 
Sbjct: 55  LCNAHRRVTH---AARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPP 111

Query: 535 D-------ISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNID 377
           D        +   +L AC    ALELGK +H    +        + N+L+EMY + G++ 
Sbjct: 112 DGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLA 171

Query: 376 QARQIFDSLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRV-------------- 239
            A ++FD +R RDV+SW+ +IS  A  G+   A  LF  M + T V              
Sbjct: 172 LAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGD 231

Query: 238 ----------------RPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYG 107
                            P+ ++ + +L AC+  G ++ G   ++  K  +G+        
Sbjct: 232 YPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGTLELGRWIYAYCKR-HGMLTSTHICN 290

Query: 106 CMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
            ++++  + GCI +A++L +GM    DV  W +++
Sbjct: 291 ALMEMYAKCGCIDQALQLFDGMA-DKDVISWSTVI 324


>ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Brachypodium distachyon]
          Length = 554

 Score =  337 bits (864), Expect = 2e-90
 Identities = 154/238 (64%), Positives = 199/238 (83%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           +I+AHARLGQMRKAR +FN MP++TVVSWTAL+SGYT+ G +S A+EAF  MQ EG EPD
Sbjct: 190 VISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPD 249

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           D+SIV+VLPACA LGALELG+WI+A+C++H++L +T++CNAL+EMYAKCG IDQA Q+F+
Sbjct: 250 DVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQLFN 309

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  +DVISWSTM+ GLA HGRA +A++LF EME    V+PN ITF+GLLSACSHAGL+D
Sbjct: 310 GMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLD 369

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ YF  M +VYGI+P +EHYGC+VDLL R+G I+R ++L++ MP   D  IWGS+L
Sbjct: 370 EGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVL 427



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 37/275 (13%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEP- 539
           L  AH R+     A  +F+++ E  +    A+I  Y     + DAI  +  M      P 
Sbjct: 54  LCNAHGRVAH---ATRVFSQVREPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPW 110

Query: 538 ------DDISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNID 377
                 D  +   +L AC  L AL+LGK +H    +        + N+L+EMY + G++ 
Sbjct: 111 ISCTGGDRFTYPFLLKACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLV 170

Query: 376 QARQIFDSLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRV-------------- 239
            AR++FD ++ RDV+SW+T+IS  A  G+   A  +F  M + T V              
Sbjct: 171 LARKVFDGMQERDVVSWNTVISAHARLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGD 230

Query: 238 ----------------RPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYG 107
                            P+ ++ + +L AC+  G ++ G ++  +  N + +  E     
Sbjct: 231 FSGAVEAFRLMQMEGFEPDDVSIVAVLPACAQLGALELG-RWIYAYCNRHQMLRETYVCN 289

Query: 106 CMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
            +V++  + GCI +A++L NGM    DV  W +++
Sbjct: 290 ALVEMYAKCGCIDQALQLFNGMA-EKDVISWSTMV 323


>gb|ACN27578.1| unknown [Zea mays] gi|414586292|tpg|DAA36863.1| TPA: hypothetical
           protein ZEAMMB73_743648 [Zea mays]
          Length = 545

 Score =  334 bits (856), Expect = 2e-89
 Identities = 154/238 (64%), Positives = 195/238 (81%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+AHAR+GQMR+AR +F  MP++TVVSWTAL+SGYT++G ++ A+E F  MQ EG EPD
Sbjct: 188 LISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPD 247

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           D+SIV+VLPACA LGALELG+WI+A+CSKH +L K +ICNALMEMYAKCG I++A Q+F 
Sbjct: 248 DVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFH 307

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  +DVISWST I GLA HGRA +A++LF  M+ + RV PN ITF+GLLSACSHAGLVD
Sbjct: 308 GMSEKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVD 367

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG++Y   MK  YG++P +EHYGC+VDLLGR+G I+RA++ + GMP  PD  IWGSLL
Sbjct: 368 EGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLL 425



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 66/268 (24%), Positives = 123/268 (45%), Gaps = 38/268 (14%)
 Frame = -3

Query: 691 GQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEM-------QSEGLEPDD 533
           G+   A  +F ++P   +    A+I  Y     + DA+E +  M        + G    D
Sbjct: 56  GRAAHAARVFAQIPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGD 115

Query: 532 -ISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
             +   +L AC  L A  LG+ +HA  ++        + N+L+EMY +CG++  AR+ FD
Sbjct: 116 RFTYPFLLKACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFD 175

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRV--------------------- 239
            +R +DV+SW+T+IS  A  G+   A +LF  M + T V                     
Sbjct: 176 GMREKDVVSWNTLISAHARMGQMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEV 235

Query: 238 ---------RPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYGCMVDLLG 86
                     P+ ++ + +L AC+  G ++ G ++  +  + +G+  ++     ++++  
Sbjct: 236 FRLMQMEGFEPDDVSIVAVLPACAQLGALELG-RWIYAYCSKHGMLGKVYICNALMEMYA 294

Query: 85  RAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           + GCI  A++L +GM    DV  W + +
Sbjct: 295 KCGCIEEALQLFHGMS-EKDVISWSTAI 321


>gb|EMJ28472.1| hypothetical protein PRUPE_ppa017736mg [Prunus persica]
          Length = 544

 Score =  318 bits (815), Expect = 1e-84
 Identities = 151/238 (63%), Positives = 190/238 (79%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           L++ +ARLGQMRKAR +F  +P +T+VSWT +ISGYT IGCY+DA++ F +MQ  G+E D
Sbjct: 189 LLSGYARLGQMRKARGVFEEIPNKTIVSWTTMISGYTRIGCYADALDIFRQMQVLGIEAD 248

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           +ISIVSVLPACA LGALE+GKWIH +  K RLL+ T +CNAL+EMY KCG +DQA Q+FD
Sbjct: 249 EISIVSVLPACAQLGALEVGKWIHMYSDKKRLLQSTCVCNALIEMYVKCGCVDQAWQLFD 308

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  RDVISWSTMI+GLA HG+A +AIKLF  M+   +V+PN ITFLGLLSAC+HAGL +
Sbjct: 309 KMLERDVISWSTMIAGLANHGKAREAIKLFQGMQR-AKVKPNGITFLGLLSACTHAGLWN 367

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG++YF SM+  Y I+PEIEHYGC+VDLLGRAG + +A + V  MP  P+  IWGSLL
Sbjct: 368 EGVKYFDSMRENYNIEPEIEHYGCLVDLLGRAGHLDQAFDRVKKMPMKPESKIWGSLL 425



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
 Frame = -3

Query: 691 GQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEM----QSEG-LEPDDIS 527
           G +  A  +F ++ E  V  + A+I  YT    Y  A+  + +M    Q+E  + PD  +
Sbjct: 60  GNLGYASLLFKQVLEPNVFLFNAMIRAYTHHQMYDLAVTLYKQMPRYSQAENPIFPDKFT 119

Query: 526 IVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDSLR 347
              ++ +CA L    LG  IHA   K        I NAL+++Y KC N+  A ++FD + 
Sbjct: 120 FPFIIKSCAGLFCEGLGTQIHAQVRKFGPKSHLLIENALLDLYTKCENLTDAHKVFDGMT 179

Query: 346 IRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVDEGM 167
             DV+SW++++SG A  G+   A  +F E+ N T      +++  ++S  +  G   + +
Sbjct: 180 EMDVVSWNSLLSGYARLGQMRKARGVFEEIPNKT-----IVSWTTMISGYTRIGCYADAL 234

Query: 166 QYFSSMKNVYGIDPE 122
             F  M+ V GI+ +
Sbjct: 235 DIFRQMQ-VLGIEAD 248


>ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544410|gb|EEF45931.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score =  315 bits (808), Expect = 7e-84
 Identities = 149/238 (62%), Positives = 187/238 (78%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           +I+ H RLGQMR+AR +F+ MP RT+VSWTA+ISGYT IG Y DA++ F EMQ  G+EPD
Sbjct: 167 IISGHVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPD 226

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           + SI+SVLPACA LGALE GKWIH FC+++ LL +T ICNAL+EMY KCG IDQA Q+FD
Sbjct: 227 EASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFD 286

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +R RDVISWSTMI GLA HG+  +AI +F  M+  T ++PN ITF+GLLSAC+HAG  +
Sbjct: 287 QMRGRDVISWSTMIGGLANHGKVREAIAIFERMK-QTNIKPNGITFVGLLSACAHAGFWE 345

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ YF +MK  + I+PEIEHYG +VDLLGRAG + +A+++V  MP  PD  IWGSLL
Sbjct: 346 EGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLL 403



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
 Frame = -3

Query: 685 MRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEG---------LEPDD 533
           M  A  +F  + +     + A+I   T    YS  I+ + +M  E          + PD+
Sbjct: 36  MDYASFLFKEVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDE 95

Query: 532 ISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDS 353
            +   V+ ACA LG   LGK +HA   K          NAL++MY KC N+  A  +FD 
Sbjct: 96  FTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDE 155

Query: 352 LRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVDE 173
           +  R  ISW+ +ISG    G+   A  LF EM N T      +++  ++S  +  G   +
Sbjct: 156 MHERGAISWNGIISGHVRLGQMRRARALFDEMPNRT-----IVSWTAIISGYTRIGSYID 210

Query: 172 GMQYFSSMKNVYGIDPE 122
            +  F  M+ + GI+P+
Sbjct: 211 ALDVFREMQ-IAGIEPD 226


>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Vitis vinifera]
          Length = 541

 Score =  314 bits (805), Expect = 2e-83
 Identities = 145/238 (60%), Positives = 187/238 (78%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+ H RLGQMR+AR +F  M ++T+ SWTA++SGY  IGCY+DA+E F  MQ  G+EPD
Sbjct: 189 LISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPD 248

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           +IS+VSVLPACA LGALELGKWIH +  K   L    +CNAL+EMYAKCG+ID+ R++FD
Sbjct: 249 EISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFD 308

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  RDVISWSTMI GLA HGRA +AI+LF EM+   ++ PN ITF+GLLSAC+HAGL++
Sbjct: 309 QMNERDVISWSTMIVGLANHGRAHEAIELFQEMQK-AKIEPNIITFVGLLSACAHAGLLN 367

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG++YF SMK  Y I+P +EHYGC+V+LLG +G + +A+EL+  MP  PD +IWGSLL
Sbjct: 368 EGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLL 425



 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 5/190 (2%)
 Frame = -3

Query: 676 ARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEM--QSEG---LEPDDISIVSVL 512
           A  +F R+ +     + A+I  Y     Y  AI  + +M   S G   + PD  +   V+
Sbjct: 65  ANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVV 124

Query: 511 PACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDSLRIRDVI 332
            +CA L   +LGK +H    K      T + N+L+EMY KC ++D A ++F+ +  RD +
Sbjct: 125 KSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAV 184

Query: 331 SWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVDEGMQYFSS 152
           SW+T+ISG    G+   A  +F EM++ T       ++  ++S  +  G   + +++F  
Sbjct: 185 SWNTLISGHVRLGQMRRARAIFEEMQDKT-----IFSWTAIVSGYARIGCYADALEFFRR 239

Query: 151 MKNVYGIDPE 122
           M+ V GI+P+
Sbjct: 240 MQMV-GIEPD 248


>gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis]
          Length = 549

 Score =  313 bits (803), Expect = 3e-83
 Identities = 144/238 (60%), Positives = 187/238 (78%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           L++ +ARLGQMRKAR +F  MP++++VSWT LISGY  IGCYS+A+E F EMQ   +EPD
Sbjct: 191 LLSGYARLGQMRKARELFEEMPDKSIVSWTVLISGYVGIGCYSEALEIFREMQMLDIEPD 250

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           ++S++SVLPACA LG LE+GKWIH +  K+ L   T +CNAL+EMYAKCG ID A Q+F+
Sbjct: 251 EVSVISVLPACAQLGVLEIGKWIHIYSDKNGLSRSTGVCNALIEMYAKCGCIDPALQLFE 310

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  RDV+SWSTMI GLA HG+A +AI+LF +M+  TR+ PN ITFLGLLSAC HAG  +
Sbjct: 311 KMMERDVVSWSTMIGGLANHGKAHEAIELFRDMQR-TRIEPNGITFLGLLSACIHAGFWN 369

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG++YF SM+  Y ++PE+EHYGC+VDLLGR+G + +A+E+V  MP  PD  IWGSLL
Sbjct: 370 EGLKYFDSMRKDYHLEPEVEHYGCLVDLLGRSGRLDQALEIVKKMPMKPDSKIWGSLL 427



 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 65/269 (24%), Positives = 127/269 (47%), Gaps = 37/269 (13%)
 Frame = -3

Query: 697 RLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLE-------P 539
           + GQ+  A  +F ++ +  V  + A+I  Y +   YS A+  + +M S+  E       P
Sbjct: 58  KTGQVEYASLLFQQVVQGNVFLYNAIIKAYANNSRYSLALILYKQMVSQISEDEKNPMLP 117

Query: 538 DDISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIF 359
           +  +   V+ +CA L  + LG+ +HA   K      +   NALM+MY KCG+++ A ++F
Sbjct: 118 NKFTFPFVVKSCAGLLCVSLGRQVHAHVWKFGTKSHSITDNALMDMYMKCGSLEYAHKLF 177

Query: 358 DSLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDT---------------------- 245
           + +R RD++SW+ ++SG A  G+   A +LF EM + +                      
Sbjct: 178 EEMRERDLVSWNGLLSGYARLGQMRKARELFEEMPDKSIVSWTVLISGYVGIGCYSEALE 237

Query: 244 --------RVRPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYGCMVDLL 89
                    + P+ ++ + +L AC+  G+++ G ++     +  G+         ++++ 
Sbjct: 238 IFREMQMLDIEPDEVSVISVLPACAQLGVLEIG-KWIHIYSDKNGLSRSTGVCNALIEMY 296

Query: 88  GRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
            + GCI  A++L   M    DV  W +++
Sbjct: 297 AKCGCIDPALQLFEKM-MERDVVSWSTMI 324


>ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum tuberosum]
          Length = 536

 Score =  313 bits (801), Expect = 5e-83
 Identities = 147/238 (61%), Positives = 187/238 (78%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI  H RL Q+RKAR +F+ MP++++VSWTA+ISGYT  GCY DA++ F  MQ  G++PD
Sbjct: 184 LICGHVRLRQVRKARALFDVMPDKSIVSWTAMISGYTKTGCYGDALDVFRRMQMVGVKPD 243

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
            IS+VSVLPACA LGALELGKWIH +  K+  L KT +CNALMEMYAKCG++++A Q+F+
Sbjct: 244 WISLVSVLPACAQLGALELGKWIHFYAEKYGYLRKTSVCNALMEMYAKCGSVNEAWQLFN 303

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  RDVISWSTMI GLA HGRA +A+KLF EM+  + V PN ITF+GLL AC+HAGL D
Sbjct: 304 QMSERDVISWSTMIGGLANHGRAQEALKLFHEMQR-SAVEPNEITFVGLLCACAHAGLCD 362

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           +G++YF SMKN Y I+P IEHYGC+VD+LGR G + RA+ ++  MP  PD +IWGSLL
Sbjct: 363 DGLRYFDSMKNDYNIEPGIEHYGCLVDILGRTGRLERALAIIKTMPVKPDSAIWGSLL 420



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 60/261 (22%), Positives = 115/261 (44%), Gaps = 31/261 (11%)
 Frame = -3

Query: 691 GQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPDDISIVSVL 512
           G++  A+ +F ++ +     + ++I  YT    Y   I  + +M    + PD+ +   V+
Sbjct: 60  GEIEYAKLLFKQVEDPNNYLYNSIIRAYTHKQRYISCINVYKQMMICTISPDEYTYPFVI 119

Query: 511 PACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDSLRIRDVI 332
            +C+ +  +++G+  H    K  L     I N+L++MY KC  +  A  +FD +  RDVI
Sbjct: 120 RSCSAILRVDVGEQFHVHVWKFGLYYSNVIANSLLDMYVKCDRMRDAHMVFDEMSDRDVI 179

Query: 331 SWST-------------------------------MISGLATHGRAFDAIKLFMEMENDT 245
           SW++                               MISG    G   DA+ +F  M+   
Sbjct: 180 SWNSLICGHVRLRQVRKARALFDVMPDKSIVSWTAMISGYTKTGCYGDALDVFRRMQM-V 238

Query: 244 RVRPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRR 65
            V+P+ I+ + +L AC+  G ++ G ++       YG   +      ++++  + G +  
Sbjct: 239 GVKPDWISLVSVLPACAQLGALELG-KWIHFYAEKYGYLRKTSVCNALMEMYAKCGSVNE 297

Query: 64  AMELVNGMPFTPDVSIWGSLL 2
           A +L N M    DV  W +++
Sbjct: 298 AWQLFNQMS-ERDVISWSTMI 317


>ref|XP_004247963.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum lycopersicum]
          Length = 534

 Score =  313 bits (801), Expect = 5e-83
 Identities = 147/238 (61%), Positives = 187/238 (78%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI  H RL Q+RKAR +F+ MP++++VSWTA+ISGYT  GCY DA++ F  MQ  G++PD
Sbjct: 182 LICGHVRLRQVRKARALFDVMPDKSIVSWTAMISGYTKTGCYGDALDVFRRMQMVGVKPD 241

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
            IS+VSVLPACA LGALELGKWIH +  K+  L KT +CNALMEMYAKCG++++A Q+F+
Sbjct: 242 WISLVSVLPACAQLGALELGKWIHFYADKYGYLRKTSVCNALMEMYAKCGSVNEAWQLFN 301

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  RDVISWSTMI GLA HGRA +A+KLF EM+  + V PN ITF+GLL AC+HAGL D
Sbjct: 302 QMSERDVISWSTMIGGLANHGRAQEALKLFHEMQR-SAVEPNEITFVGLLCACAHAGLCD 360

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           +G++YF SMKN Y I+P IEHYGC+VD+LGR G + RA+ ++  MP  PD +IWGSLL
Sbjct: 361 DGLRYFDSMKNDYNIEPGIEHYGCLVDILGRTGRLERALAIIKTMPVKPDSAIWGSLL 418



 Score = 90.1 bits (222), Expect = 6e-16
 Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 31/263 (11%)
 Frame = -3

Query: 697 RLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPDDISIVS 518
           ++G++  A  +F ++       + ++I  YT    Y   I  + +M +  + PD+ +   
Sbjct: 56  KIGEIEYANLLFKQVEHPNNYLYNSIIRAYTHKHRYISCINVYKQMMTCAISPDEYTYPF 115

Query: 517 VLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDSLRIRD 338
           V+ +C+ +  +++G+  H    K  L     I N+L++MY KC  +  A  +FD +  RD
Sbjct: 116 VIRSCSAILRVDVGEQFHVHVCKFGLYCSNVIANSLLDMYVKCDRMRDAHMVFDEMSDRD 175

Query: 337 VISWST-------------------------------MISGLATHGRAFDAIKLFMEMEN 251
           VISW++                               MISG    G   DA+ +F  M+ 
Sbjct: 176 VISWNSLICGHVRLRQVRKARALFDVMPDKSIVSWTAMISGYTKTGCYGDALDVFRRMQM 235

Query: 250 DTRVRPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCI 71
              V+P+ I+ + +L AC+  G ++ G ++     + YG   +      ++++  + G +
Sbjct: 236 -VGVKPDWISLVSVLPACAQLGALELG-KWIHFYADKYGYLRKTSVCNALMEMYAKCGSV 293

Query: 70  RRAMELVNGMPFTPDVSIWGSLL 2
             A +L N M    DV  W +++
Sbjct: 294 NEAWQLFNQMS-ERDVISWSTMI 315


>ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Capsella rubella]
           gi|482568195|gb|EOA32384.1| hypothetical protein
           CARUB_v10015651mg [Capsella rubella]
          Length = 534

 Score =  309 bits (792), Expect = 5e-82
 Identities = 142/238 (59%), Positives = 189/238 (79%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           L++ +ARLGQM+KA+ +F  MP++T+VSWTA+ISGY+ IGCY +A++ F EMQ  G+EPD
Sbjct: 181 LLSGYARLGQMKKAKALFRLMPDKTIVSWTAMISGYSGIGCYVEAMDFFREMQLAGIEPD 240

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           +IS++SVLP+CAHLG+LELGKWIH +  + R L++T +CNAL+EMY+KCG I QA Q+FD
Sbjct: 241 EISLISVLPSCAHLGSLELGKWIHMYAERRRFLKQTGVCNALIEMYSKCGVISQAIQLFD 300

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            ++ +DVISWSTMISG A HG A  AI++F EM+   +V+PN ITFLGLLSACSH GL  
Sbjct: 301 QMKRKDVISWSTMISGYAHHGNAHRAIEIFNEMQR-AKVKPNGITFLGLLSACSHVGLWQ 359

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG++YF  M+  Y I+P+IEHYGC++D+L RAG + RA+E+   MP  PD  IWGSLL
Sbjct: 360 EGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLL 417



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
 Frame = -3

Query: 697 RLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLE-PDDISIV 521
           ++G M  A  +FN++    V  + ++I  YT    Y + I  + ++  + +E PD  +  
Sbjct: 54  KIGDMEYATRLFNQVSYPNVFLYNSIIRAYTHHSLYCEVIRIYRQLFMKSIELPDRFTFP 113

Query: 520 SVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDSLRIR 341
            +  +CA LG+  LGK +H    K          NAL++MY K  ++  A ++FD +  R
Sbjct: 114 FMFKSCASLGSCYLGKQVHGHLCKFGPKFHVVTENALIDMYMKFDDLADADRVFDEMSDR 173

Query: 340 DVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVDEGMQY 161
           DVISW++++SG A  G+   A  LF  M + T      +++  ++S  S  G   E M +
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKALFRLMPDKT-----IVSWTAMISGYSGIGCYVEAMDF 228

Query: 160 FSSMKNVYGIDPE 122
           F  M+ + GI+P+
Sbjct: 229 FREMQ-LAGIEPD 240


>ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
           [Vitis vinifera]
          Length = 537

 Score =  309 bits (791), Expect = 7e-82
 Identities = 144/238 (60%), Positives = 186/238 (78%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+ H RLGQMR+AR +F  M ++T+ SWTA++SGY  IGCY+DA+E F  MQ  G+EPD
Sbjct: 189 LISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPD 248

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           +IS+VSVLP CA LGALELGKWIH +  K   L    +CNAL+EMYAKCG+IDQ R++FD
Sbjct: 249 EISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFD 308

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            ++ RDVISWSTMI GLA HGRA +AI+LF EM+   ++ P+ ITF+GLL+AC+HAGL++
Sbjct: 309 QMKERDVISWSTMIVGLANHGRAREAIELFQEMQK-AKIEPSIITFVGLLTACAHAGLLN 367

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG++YF SMK  Y I+P +EHYGC+V+LLG +G + +A+ELV  MP  PD  IWGSLL
Sbjct: 368 EGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLL 425



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 5/195 (2%)
 Frame = -3

Query: 691 GQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEG-----LEPDDIS 527
           G+   A  +F  + +     + A+I  Y     Y  AI  + +M         + PD  +
Sbjct: 60  GETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFT 119

Query: 526 IVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDSLR 347
              V+ +CA L   +LGK +H    K      T + N+L+EMY KC ++D A ++F+ + 
Sbjct: 120 FPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMT 179

Query: 346 IRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVDEGM 167
            RD +SW+T+ISG    G+   A  +F EM++ T       ++  ++S  +  G   + +
Sbjct: 180 ERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKT-----IFSWTAIVSGYARIGCYADAL 234

Query: 166 QYFSSMKNVYGIDPE 122
           ++F  M+ V GI+P+
Sbjct: 235 EFFRRMQMV-GIEPD 248


>ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Citrus sinensis]
          Length = 541

 Score =  308 bits (789), Expect = 1e-81
 Identities = 145/238 (60%), Positives = 188/238 (78%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+ +ARLGQM+KAR +F++MP +T+VSWTA+ISGYT IG Y++A++ F +MQ  G+EPD
Sbjct: 189 LISGYARLGQMKKARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           +ISIVSVLPACA LG+LELG+WIH +C K+ LL +T ICNAL+EMY KCG I+QA Q+FD
Sbjct: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  RDV+SWST+I GLA HG+A  AI LF EM+   +V PN ITF+GLLSAC+H G  +
Sbjct: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR-LKVPPNDITFIGLLSACAHTGFWN 367

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ YF SMK  + I+ +IEHYGC+VDLLGRAG + +A+ ++  MP  PD  IWGSLL
Sbjct: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
 Frame = -3

Query: 691 GQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEG-----LEPDDIS 527
           G +  A  +F ++ E  V  + A+I  YT+   Y  AI  + +M  +      + PD  +
Sbjct: 60  GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119

Query: 526 IVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDSLR 347
           +  V+ +CA L    LGK IHA   K  L   +   NAL+++Y KC  + +A ++F+ + 
Sbjct: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179

Query: 346 IRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVDEGM 167
            RD+++W+ +ISG A  G+   A  LF +M   T      +++  ++S  +H G   E +
Sbjct: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYKT-----IVSWTAMISGYTHIGSYAEAL 234

Query: 166 QYFSSMKNVYGIDPE 122
             F  M+ V GI+P+
Sbjct: 235 DVFRQMQMV-GIEPD 248


>ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citrus clementina]
           gi|557553822|gb|ESR63836.1| hypothetical protein
           CICLE_v10010742mg [Citrus clementina]
          Length = 605

 Score =  308 bits (789), Expect = 1e-81
 Identities = 145/238 (60%), Positives = 188/238 (78%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+ +ARLGQM+KAR +F++MP +T+VSWTA+ISGYT IG Y++A++ F +MQ  G+EPD
Sbjct: 189 LISGYARLGQMKKARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 248

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           +ISIVSVLPACA LG+LELG+WIH +C K+ LL +T ICNAL+EMY KCG I+QA Q+FD
Sbjct: 249 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 308

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  RDV+SWST+I GLA HG+A  AI LF EM+   +V PN ITF+GLLSAC+H G  +
Sbjct: 309 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR-LKVPPNDITFIGLLSACAHTGFWN 367

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ YF SMK  + I+ +IEHYGC+VDLLGRAG + +A+ ++  MP  PD  IWGSLL
Sbjct: 368 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 425



 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
 Frame = -3

Query: 691 GQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEG-----LEPDDIS 527
           G +  A  +F ++ E  V  + A+I  YT+   Y  AI  + +M  +      + PD  +
Sbjct: 60  GDLAYASLLFKQVKEPNVFLYNAMIRAYTNNHLYGLAINLYKQMLRDPRTGSLILPDKFT 119

Query: 526 IVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDSLR 347
           +  V+ +CA L    LGK IHA   K  L   +   NAL+++Y KC  + +A ++F+ + 
Sbjct: 120 LPFVIKSCAGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKVFEEMT 179

Query: 346 IRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVDEGM 167
            RD+++W+ +ISG A  G+   A  LF +M   T      +++  ++S  +H G   E +
Sbjct: 180 DRDIVAWNNLISGYARLGQMKKARMLFDKMPYKT-----IVSWTAMISGYTHIGSYAEAL 234

Query: 166 QYFSSMKNVYGIDPE 122
             F  M+ V GI+P+
Sbjct: 235 DVFRQMQMV-GIEPD 248


>ref|XP_006481440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like, partial [Citrus sinensis]
          Length = 436

 Score =  308 bits (788), Expect = 1e-81
 Identities = 145/238 (60%), Positives = 188/238 (78%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           LI+ +ARLGQM+KAR +F++MP +T+VSWTA+ISGYT IG Y++A++ F +MQ  G+EPD
Sbjct: 84  LISGNARLGQMKKARMLFDKMPYKTIVSWTAMISGYTHIGSYAEALDVFRQMQMVGIEPD 143

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           +ISIVSVLPACA LG+LELG+WIH +C K+ LL +T ICNAL+EMY KCG I+QA Q+FD
Sbjct: 144 EISIVSVLPACAQLGSLELGEWIHMYCDKNHLLRRTVICNALIEMYIKCGCINQASQLFD 203

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +  RDV+SWST+I GLA HG+A  AI LF EM+   +V PN ITF+GLLSAC+H G  +
Sbjct: 204 QMVERDVVSWSTVIGGLANHGKAHKAIHLFHEMQR-LKVPPNDITFIGLLSACAHTGFWN 262

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ YF SMK  + I+ +IEHYGC+VDLLGRAG + +A+ ++  MP  PD  IWGSLL
Sbjct: 263 EGLMYFDSMKRDHHIEHKIEHYGCLVDLLGRAGRLDQALNIIEEMPMKPDAKIWGSLL 320



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 44/140 (31%), Positives = 76/140 (54%)
 Frame = -3

Query: 541 PDDISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQI 362
           PD  +++ V+ +C  L    LGK IHA   K  L   +   NAL+++Y KC  + +A ++
Sbjct: 10  PDKFTLLFVIKSCVGLLCPSLGKQIHAHVCKFGLKSHSITENALLDLYGKCDELIEAHKV 69

Query: 361 FDSLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGL 182
           F+ +  RD+++W+ +ISG A  G+   A  LF +M   T      +++  ++S  +H G 
Sbjct: 70  FEEMTDRDIVAWNNLISGNARLGQMKKARMLFDKMPYKT-----IVSWTAMISGYTHIGS 124

Query: 181 VDEGMQYFSSMKNVYGIDPE 122
             E +  F  M+ V GI+P+
Sbjct: 125 YAEALDVFRQMQMV-GIEPD 143


>ref|XP_002324255.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222865689|gb|EEF02820.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 547

 Score =  308 bits (788), Expect = 1e-81
 Identities = 145/238 (60%), Positives = 185/238 (77%)
 Frame = -3

Query: 715 LITAHARLGQMRKARNMFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEMQSEGLEPD 536
           +I+ H  +GQMRKA  +F+ MP RT+VSWTA+ISGYT +G Y+DA+  F +MQ  G+EPD
Sbjct: 191 IISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPD 250

Query: 535 DISIVSVLPACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFD 356
           +ISI+SVLPACA LGALE+GKWIH +C ++ LL KT ICNALMEMY+KCG I QA Q+FD
Sbjct: 251 EISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFD 310

Query: 355 SLRIRDVISWSTMISGLATHGRAFDAIKLFMEMENDTRVRPNCITFLGLLSACSHAGLVD 176
            +   DVISWSTMI GLA HG+A +AI+LF  M+   ++ PN ITFLGLLSAC+HAG  +
Sbjct: 311 QMSKGDVISWSTMIGGLANHGKAREAIELFKRMKK-AKIEPNGITFLGLLSACAHAGFWN 369

Query: 175 EGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRAMELVNGMPFTPDVSIWGSLL 2
           EG+ YF SM   Y I+PE+EHYGC+VD+LGRAG + +A++++  MP  PD  IWGSLL
Sbjct: 370 EGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLL 427



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 38/260 (14%)
 Frame = -3

Query: 667 MFNRMPERTVVSWTALISGYTSIGCYSDAIEAFSEM------QSEG-LEPDDISIVSVLP 509
           +F ++ E     + A+I  +T    Y+ AI  + EM      +SE  + PD  +   V+ 
Sbjct: 68  LFKQVKEPNGYLYNAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIK 127

Query: 508 ACAHLGALELGKWIHAFCSKHRLLEKTFICNALMEMYAKCGNIDQARQIFDSLRIRD--- 338
           +C+ L    LGK +HA   K        + NAL++MY KC ++  A ++FD +  RD   
Sbjct: 128 SCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAIS 187

Query: 337 ----------------------------VISWSTMISGLATHGRAFDAIKLFMEMENDTR 242
                                       ++SW+ MISG    G   DA+ +F +M+    
Sbjct: 188 WNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQ-IVG 246

Query: 241 VRPNCITFLGLLSACSHAGLVDEGMQYFSSMKNVYGIDPEIEHYGCMVDLLGRAGCIRRA 62
           V P+ I+ + +L AC+  G ++ G ++     +  G+  +      ++++  + GCI +A
Sbjct: 247 VEPDEISIISVLPACAQLGALEVG-KWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQA 305

Query: 61  MELVNGMPFTPDVSIWGSLL 2
            +L + M    DV  W +++
Sbjct: 306 YQLFDQMS-KGDVISWSTMI 324