BLASTX nr result
ID: Zingiber25_contig00012268
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00012268
(420 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB65262.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 94 1e-17
gb|AFW74985.1| putative RING zinc finger domain superfamily prot... 92 9e-17
ref|XP_006654903.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 91 2e-16
gb|EEE62065.1| hypothetical protein OsJ_16849 [Oryza sativa Japo... 91 2e-16
ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group] g... 91 2e-16
gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza... 91 2e-16
ref|XP_003597390.1| RING finger protein [Medicago truncatula] gi... 90 4e-16
emb|CBI31649.3| unnamed protein product [Vitis vinifera] 90 4e-16
ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 90 4e-16
emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera] 90 4e-16
gb|AFW82888.1| putative RING zinc finger domain superfamily prot... 88 1e-15
ref|XP_003569102.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 88 1e-15
ref|XP_004503159.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 87 2e-15
ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 87 2e-15
gb|AGB52033.1| ring H2 finger protein, partial [Elaeis guineensis] 87 3e-15
ref|XP_004486987.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 86 4e-15
emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera] 86 4e-15
ref|XP_004294651.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 86 5e-15
ref|XP_003569088.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 86 5e-15
dbj|BAJ87816.1| predicted protein [Hordeum vulgare subsp. vulgare] 86 5e-15
>gb|EXB65262.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 390
Score = 94.4 bits (233), Expect = 1e-17
Identities = 52/114 (45%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPA----AKDDEPVAPARSDEEETVRLTIWRLPXXX 253
HIYH +CILPWLSLHNSCPVCRH++PA + + E P +EEE V LTIWRLP
Sbjct: 216 HIYHPECILPWLSLHNSCPVCRHELPADAPNSSEPENGQPLTPNEEENVGLTIWRLPGGG 275
Query: 252 XXXXXXXXXXXXXAEQLPAAYTEMDVPSLNH--RRRSAPAATPERLTARGGIRR 97
+LP YTEMD N RR + ++ R RGG+RR
Sbjct: 276 FAVGRFSGGRRGGERELPVVYTEMDGGFNNGGLPRRISWSSRGSRGRERGGLRR 329
>gb|AFW74985.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 348
Score = 91.7 bits (226), Expect = 9e-17
Identities = 50/111 (45%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYH DCILPWL+L NSCPVCRHQMP P +EE TV LTIWRLP
Sbjct: 188 HIYHADCILPWLALRNSCPVCRHQMPT-----DAIPLEQEEEATVGLTIWRLPGGGFAVG 242
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLNHRRRSAPAATPERLTA---RGGIRR 97
+LP YTEMD N R + R A RG +RR
Sbjct: 243 RFAGGRTPEERELPVVYTEMDGAGFNSGRAPRRVSWGSRQAASTNRGTVRR 293
>ref|XP_006654903.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like, partial [Oryza
brachyantha]
Length = 260
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/110 (47%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYHQDCILPWL+L NSCPVCRH+MP P EEETV LTIWRLP
Sbjct: 90 HIYHQDCILPWLALRNSCPVCRHEMP-TDAARPRPSNAGTEEETVGLTIWRLPGGGFAVG 148
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGGIRR 97
+LP YTEMD N RR + + R T R IRR
Sbjct: 149 RFAGGRRPEERELPVVYTEMDGGFNNGGAPRRISWGSRQSRSTERSAIRR 198
>gb|EEE62065.1| hypothetical protein OsJ_16849 [Oryza sativa Japonica Group]
Length = 243
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/110 (47%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYHQDCILPWL+L NSCPVCRH+MP P EEETV LTIWRLP
Sbjct: 73 HIYHQDCILPWLALRNSCPVCRHEMP-TDAARPRPSNAGTEEETVGLTIWRLPGGGFAVG 131
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGGIRR 97
+LP YTEMD N RR + + R T R IRR
Sbjct: 132 RFAGGRRPEERELPVVYTEMDGGFNNGGAPRRISWGSRQSRSTERSAIRR 181
>ref|NP_001054437.2| Os05g0110000 [Oryza sativa Japonica Group]
gi|52353630|gb|AAU44196.1| putative ring-H2 finger
protein [Oryza sativa Japonica Group]
gi|255675945|dbj|BAF16351.2| Os05g0110000 [Oryza sativa
Japonica Group]
Length = 333
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/110 (47%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYHQDCILPWL+L NSCPVCRH+MP P EEETV LTIWRLP
Sbjct: 163 HIYHQDCILPWLALRNSCPVCRHEMP-TDAARPRPSNAGTEEETVGLTIWRLPGGGFAVG 221
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGGIRR 97
+LP YTEMD N RR + + R T R IRR
Sbjct: 222 RFAGGRRPEERELPVVYTEMDGGFNNGGAPRRISWGSRQSRSTERSAIRR 271
>gb|AAK73147.1|AC079022_20 putative RING-H2 finger protein [Oryza sativa]
Length = 386
Score = 90.9 bits (224), Expect = 2e-16
Identities = 52/110 (47%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYHQDCILPWL+L NSCPVCRH+MP P EEETV LTIWRLP
Sbjct: 216 HIYHQDCILPWLALRNSCPVCRHEMP-TDAARPRPSNAGTEEETVGLTIWRLPGGGFAVG 274
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGGIRR 97
+LP YTEMD N RR + + R T R IRR
Sbjct: 275 RFAGGRRPEERELPVVYTEMDGGFNNGGAPRRISWGSRQSRSTERSAIRR 324
>ref|XP_003597390.1| RING finger protein [Medicago truncatula]
gi|87241270|gb|ABD33128.1| Zinc finger, RING-type;
Thioredoxin-related [Medicago truncatula]
gi|355486438|gb|AES67641.1| RING finger protein
[Medicago truncatula] gi|388498558|gb|AFK37345.1|
unknown [Medicago truncatula]
Length = 355
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
H+YH DCILPWLS+ NSCPVCRH++P+ ++ + +EE V LTIWRLP
Sbjct: 209 HLYHSDCILPWLSMRNSCPVCRHELPSDQNASESRISGQIDEEAVGLTIWRLPGGGFAVG 268
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLNH-RRRSAPAATPERLTARGGIRR 97
QLP YTEMD + N RR + R+ R GIRR
Sbjct: 269 RFAGGRRAGEIQLPIVYTEMDGNNSNEDSRRISLTVGSNRVRERRGIRR 317
>emb|CBI31649.3| unnamed protein product [Vitis vinifera]
Length = 761
Score = 89.7 bits (221), Expect = 4e-16
Identities = 49/110 (44%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYH DCILPWLSL NSCPVCRH++P+ + + P + ++ EETV LTIWRLP
Sbjct: 181 HIYHSDCILPWLSLRNSCPVCRHELPSEERNSPESNEQT-PEETVGLTIWRLPGGGFAVG 239
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGGIRR 97
+LP YTEMD N RR + + R RGG+ R
Sbjct: 240 RFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISWTSRTNRNQERGGLGR 289
>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 361
Score = 89.7 bits (221), Expect = 4e-16
Identities = 49/110 (44%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYH DCILPWLSL NSCPVCRH++P+ + + P + ++ EETV LTIWRLP
Sbjct: 196 HIYHSDCILPWLSLRNSCPVCRHELPSEERNSPESNEQT-PEETVGLTIWRLPGGGFAVG 254
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGGIRR 97
+LP YTEMD N RR + + R RGG+ R
Sbjct: 255 RFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISWTSRTNRNQERGGLGR 304
>emb|CAN70319.1| hypothetical protein VITISV_016758 [Vitis vinifera]
Length = 365
Score = 89.7 bits (221), Expect = 4e-16
Identities = 49/110 (44%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYH DCILPWLSL NSCPVCRH++P+ + + P + ++ EETV LTIWRLP
Sbjct: 200 HIYHSDCILPWLSLRNSCPVCRHELPSEERNSPESNEQT-PEETVGLTIWRLPGGGFAVG 258
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGGIRR 97
+LP YTEMD N RR + + R RGG+ R
Sbjct: 259 RFSGGRRGGERELPVVYTEMDGGFNNGGAPRRISWTSRTNRNQERGGLGR 308
>gb|AFW82888.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 293
Score = 87.8 bits (216), Expect = 1e-15
Identities = 50/113 (44%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAK-DDEPVAPARSDEEETVRLTIWRLPXXXXXX 244
HIYH DCILPWL+L NSCPVCRH+MPA A A +DE+ V LTIWRLP
Sbjct: 118 HIYHADCILPWLALRNSCPVCRHEMPADNAAPRAAAAAAADEDARVGLTIWRLPGGGFAV 177
Query: 243 XXXXXXXXXXAEQLPAAYTEMD----VPSLNHRRRSAPAATPERLTARGGIRR 97
+LP YTEM+ S + RR + A T RG +RR
Sbjct: 178 GRFAGGPRPDERELPVVYTEMESGFNFNSGHAPRRISWGARQAAATDRGTVRR 230
>ref|XP_003569102.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 410
Score = 87.8 bits (216), Expect = 1e-15
Identities = 51/110 (46%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYH DCILPWL L NSCPVCRH+MP + A EEETV LTIWRLP
Sbjct: 239 HIYHPDCILPWLQLRNSCPVCRHEMPTDAARSRASNA-GTEEETVGLTIWRLPGGGFAVG 297
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGGIRR 97
+LP YTEMD N RR + A + T R IRR
Sbjct: 298 RFAGGRRPEERELPVVYTEMDGGFNNGGAPRRISWGARQSQSTERSAIRR 347
>ref|XP_004503159.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum]
Length = 380
Score = 87.4 bits (215), Expect = 2e-15
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARS----DEEETVRLTIWRLPXXX 253
HIYH DCILPWL+LHNSCPVCRH++P+ + + ++S +E+ V LTIWRLP
Sbjct: 212 HIYHPDCILPWLALHNSCPVCRHELPSDNELQSQTQSQSVGLNEEDNNVGLTIWRLPGGG 271
Query: 252 XXXXXXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGGIR 100
+LP YTEMD N RR + ++ R RGG R
Sbjct: 272 FAVGRFAGGRRGAERELPVVYTEMDGAFNNGGEPRRISWSSGGSRERERGGFR 324
>ref|XP_002283212.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 388
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/90 (48%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPA---------AKDDEPVAPARSDEEETVRLTIWR 268
HIYH DCILPWLSL NSCPVCRH++P +E ++PA +EEETV LTIWR
Sbjct: 208 HIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRNSPVSGNEALSPA-PNEEETVGLTIWR 266
Query: 267 LPXXXXXXXXXXXXXXXXAEQLPAAYTEMD 178
LP +LP YTEMD
Sbjct: 267 LPGGGFAVGRFSGGRRAGERELPVVYTEMD 296
>gb|AGB52033.1| ring H2 finger protein, partial [Elaeis guineensis]
Length = 207
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/89 (48%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMP--------AAKDDEPVAPARSDEEETVRLTIWRL 265
HIYHQDCILPWLSL NSCPVCRH+MP A D + AP ++ V LTIWRL
Sbjct: 10 HIYHQDCILPWLSLRNSCPVCRHEMPTDVREMGAAETDGDEHAPMGGSADDLVGLTIWRL 69
Query: 264 PXXXXXXXXXXXXXXXXAEQLPAAYTEMD 178
P +LP YTEMD
Sbjct: 70 PGGGFAIGRFSGGRRAGERELPVVYTEMD 98
>ref|XP_004486987.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum]
Length = 328
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
H+YH DCILPWLS+ NSCPVCRH++P+ ++ + +EE V LTIWRLP
Sbjct: 196 HLYHSDCILPWLSMRNSCPVCRHELPSDQNSSETRISGQIDEEAVGLTIWRLPGGGFAVG 255
Query: 240 XXXXXXXXXAEQLPAAYTEMDVPSLNHR--RRSAPAATPERLTARGGIRR 97
LP +TEMD + ++ RR + A + R GIRR
Sbjct: 256 RFIGGRRAGESHLPVVFTEMDGGNNSNEGSRRISLAVGSNGVRERRGIRR 305
>emb|CAN72193.1| hypothetical protein VITISV_022309 [Vitis vinifera]
Length = 1218
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/90 (48%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPA---------AKDDEPVAPARSDEEETVRLTIWR 268
HIYH DCILPWLSL NSCPVCRH++P E ++PA +EEETV LTIWR
Sbjct: 318 HIYHSDCILPWLSLRNSCPVCRHELPTDVPGTRNSPVSGTEALSPA-PNEEETVGLTIWR 376
Query: 267 LPXXXXXXXXXXXXXXXXAEQLPAAYTEMD 178
LP +LP YTEMD
Sbjct: 377 LPGGGFAVGRFSGGRRAGERELPVVYTEMD 406
>ref|XP_004294651.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Fragaria vesca
subsp. vesca]
Length = 356
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/81 (48%), Positives = 46/81 (56%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVAPARSDEEETVRLTIWRLPXXXXXXX 241
HIYH DCILPWLS+ NSCPVCRH++P ++ EP +EE LTIWRLP
Sbjct: 198 HIYHSDCILPWLSMRNSCPVCRHELPVDRNSEP-----GHDEEATGLTIWRLPGGGFAVG 252
Query: 240 XXXXXXXXXAEQLPAAYTEMD 178
+LP YTEMD
Sbjct: 253 RFSGARRPGERELPVVYTEMD 273
>ref|XP_003569088.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 415
Score = 85.9 bits (211), Expect = 5e-15
Identities = 51/123 (41%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMPAAKDDEPVA-PARSD------------EEETVRL 280
H+YHQDCILPWL+L NSCPVCRH++P P + PA ++ EEETV L
Sbjct: 239 HMYHQDCILPWLALRNSCPVCRHELPTDVPRPPASDPAAAEDQGSNTGAEAGSEEETVGL 298
Query: 279 TIWRLPXXXXXXXXXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTARGG 106
TIWRLP +LP YTE+D N RR + ++ R + RG
Sbjct: 299 TIWRLPGGGFAVGRFAGGRRAGERELPVVYTEVDGGFNNGPAPRRISWSSRGSRSSQRGT 358
Query: 105 IRR 97
IRR
Sbjct: 359 IRR 361
>dbj|BAJ87816.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 85.9 bits (211), Expect = 5e-15
Identities = 52/125 (41%), Positives = 65/125 (52%), Gaps = 17/125 (13%)
Frame = -1
Query: 420 HIYHQDCILPWLSLHNSCPVCRHQMP------------AAKDDE---PVAPARSDEEETV 286
H+YHQDCILPWL+L NSCPVCRH++P A DD+ A A S+EE TV
Sbjct: 218 HMYHQDCILPWLALRNSCPVCRHELPTDVPRSAPAGDLGAADDQGSNTGAEAGSEEETTV 277
Query: 285 RLTIWRLPXXXXXXXXXXXXXXXXAEQLPAAYTEMDVPSLN--HRRRSAPAATPERLTAR 112
LTIWRLP +LP YTE+D N RR + ++ R + R
Sbjct: 278 GLTIWRLPGGGFAVGRFAGGRRAGERELPVVYTEVDGGFNNGGAPRRISWSSRGSRSSQR 337
Query: 111 GGIRR 97
G +RR
Sbjct: 338 GIVRR 342