BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00012233
         (2409 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   529   e-147
ref|XP_002451419.1| hypothetical protein SORBIDRAFT_04g001815 [S...   521   e-145
ref|NP_001045722.1| Os02g0121900 [Oryza sativa Japonica Group] g...   521   e-145
ref|XP_004952080.1| PREDICTED: pentatricopeptide repeat-containi...   508   e-141
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]   505   e-140
ref|NP_001169582.1| hypothetical protein [Zea mays] gi|224030203...   504   e-140
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   497   e-138
gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [...   496   e-137
ref|XP_003573599.1| PREDICTED: pentatricopeptide repeat-containi...   496   e-137
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu...   493   e-136
ref|XP_002326829.1| predicted protein [Populus trichocarpa]           493   e-136
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi...   490   e-135
emb|CBI39452.3| unnamed protein product [Vitis vinifera]              489   e-135
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]     488   e-135
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   488   e-135
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi...   486   e-134
ref|XP_006648252.1| PREDICTED: pentatricopeptide repeat-containi...   485   e-134
gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily p...   482   e-133
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   481   e-133
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi...   476   e-131

>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  529 bits (1363), Expect = e-147
 Identities = 311/673 (46%), Positives = 416/673 (61%), Gaps = 17/673 (2%)
 Frame = -2

Query: 2294 AIADLVNAEATDSWPPSLPASLTALVRSHTHALSPSDLLHSLYLLRRPNAAGHLLLWSLN 2115
            A+A L+N   T+ W   L +SL  L  S    LS + +L +L L+R P  A H   W   
Sbjct: 68   AMARLIN---TEPWSHELQSSLAELAPS----LSKTTVLQTLQLIRTPAKALHFFRW--- 117

Query: 2114 LVPLEPAVTGKVIYLLL-----RSRXXXXXXXXXXXXXXXXXXXXS-----FNALLRRLA 1965
             V  +     +  Y L+     RSR                          FN+L+R   
Sbjct: 118  -VEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYG 176

Query: 1964 TAGHLRYAVRLFRLIP----SPSVFSYNSLLXXXXXXXXXXXASDLFEEML-ARAVRPDV 1800
             AG  + ++++F+ +     SPSV ++NSLL           A  LF+EML    V PD 
Sbjct: 177  WAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDT 236

Query: 1799 CTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNG 1620
             TFN LIRGFC+NSMV E F  FKEMSR  C PDVVTYNTL+DGLCRAG+V+IAH ++ G
Sbjct: 237  YTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKG 296

Query: 1619 MRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCKS 1440
            M + +P+ +PNVV+YTTLIRGYC K           +M+S GL+PN ITYNTLIQGLC++
Sbjct: 297  MVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEA 356

Query: 1439 RRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLD 1260
            +++D +KE+L+ G  GD    F PDTCT NTLI AHC MG   +A  VFEKM+E++V  D
Sbjct: 357  QKLDKIKEILE-GMVGDGG--FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 413

Query: 1259 SVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPMLNYLCHSGKTE 1083
            S TY +L+R LC+ G+F RAEE  DEL  KE+L    GC PLVA YNPM  YLC +GKT+
Sbjct: 414  SATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTK 473

Query: 1082 KARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPDAEIYQILI 903
            KA  V +QL+  +   D  ++KT+ILG+C+EG  + G++LLV M +RD VPDAE Y ++I
Sbjct: 474  KAERVFRQLM-KRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMI 532

Query: 902  NGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLVIVMLERSV 726
            +G L++     A + L KM  S H P+T  FH +L  +V+K     ES  LV +MLER +
Sbjct: 533  DGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKG-CAHESASLVKLMLERRI 591

Query: 725  RPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKFLEAREMLL 546
            R NIDLST  V  L++S   D+AF  + LLYE GY +KMEELV  LC+SRK LEA++MLL
Sbjct: 592  RQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLL 651

Query: 545  FSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENG 366
            FSLEK + +  D+ +TVI+ LC   K  EAF L+YE+ E+G      +C   L+++LE  
Sbjct: 652  FSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQH-RLTCQEDLRISLEAE 710

Query: 365  EKMNEAKFVAKQI 327
             ++NEAKFV+K++
Sbjct: 711  GRLNEAKFVSKKM 723


>ref|XP_002451419.1| hypothetical protein SORBIDRAFT_04g001815 [Sorghum bicolor]
            gi|241931250|gb|EES04395.1| hypothetical protein
            SORBIDRAFT_04g001815 [Sorghum bicolor]
          Length = 613

 Score =  521 bits (1343), Expect = e-145
 Identities = 277/574 (48%), Positives = 377/574 (65%), Gaps = 13/574 (2%)
 Frame = -2

Query: 1988 NALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXASDLFEEMLARA-V 1812
            NALLR LA AG +R A  LFR IP P+  S+NSLL           AS L    L     
Sbjct: 44   NALLRALAAAGRVRAATSLFRSIPVPTPHSFNSLLAALLRRGRRRAASALLAAFLRSPDA 103

Query: 1811 RPDVCTFNTLIRGFCLNSMVHEAFHVFKEM----SRHGCAPDVVTYNTLLDGLCRAGEVR 1644
             PDV T NTLI G    S    A  +FK        +  APDV+TYN++L  LCRAG++ 
Sbjct: 104  SPDVATLNTLIHGLSTASPRPSAPTLFKLFLFLPETYAFAPDVITYNSMLSALCRAGDLA 163

Query: 1643 IAHKLLNGMRRN----TPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNI 1476
             AHKL +GMR +      D  PNVV+YTT+IR  C+K            M++ G+ PN I
Sbjct: 164  TAHKLFDGMRVSGQGGKADAFPNVVTYTTMIRACCAKRLADEALSLFKMMVADGVPPNRI 223

Query: 1475 TYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKV 1296
            TYNT++QG C++ RM+LVKE+            F+PDTCTFNTL+AAHC  G   DA+KV
Sbjct: 224  TYNTMVQGFCEAGRMELVKEVFGMDS-------FKPDTCTFNTLMAAHCREGRIEDAMKV 276

Query: 1295 FEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNP 1119
            F++M E++V  DS +Y ++IR LCENGEFGR EE +D+LL KEVL+++GGC+PL+A Y+P
Sbjct: 277  FDQMMELRVRRDSASYSMVIRALCENGEFGRVEEFVDDLLEKEVLKKKGGCVPLIAAYSP 336

Query: 1118 MLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRD 939
            +L Y C +GK +KAR++  QLLD ++K D  AFKT+ILG+CKEG F++GY+L++SM KRD
Sbjct: 337  VLKYFCENGKAKKARVLFGQLLDRRSKVDFLAFKTLILGHCKEGDFEEGYQLVLSMLKRD 396

Query: 938  LVPDAEIYQILINGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKES 762
            L PD E Y  +I+GF+Q+  +  AWE L +M NS  +PST  FH VL+G++KK    KE+
Sbjct: 397  LRPDTECYIAVIDGFMQKGRMKSAWEALHRMLNSGLQPSTSTFHSVLLGLLKKDGCAKEA 456

Query: 761  GDLVIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCK 582
            GDL+ +MLER +R N+DLST ++  LF+SD NDRA+KI K LY+ GY +KME+++ +LC+
Sbjct: 457  GDLIEIMLERKIRQNVDLSTNLIGVLFKSDLNDRAYKITKRLYDNGYYIKMEKVIATLCQ 516

Query: 581  SRKFLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSS 402
             +KF++A E  LFSL+K  ++  +V++ V++ LCS G+  EAF LFYE+ E    S  ++
Sbjct: 517  DKKFIDAAEFTLFSLQKRHELGVEVHSLVLDGLCSDGRTSEAFQLFYELMENRSTSAVAA 576

Query: 401  --CLCALKVALENGEKMNEAKFVAKQINRAVDEV 306
               L  L  ALE   K+ EA FVAKQ+ RA   +
Sbjct: 577  PRSLVLLHHALEEAGKVKEADFVAKQMRRATARI 610


>ref|NP_001045722.1| Os02g0121900 [Oryza sativa Japonica Group]
            gi|41052752|dbj|BAD07608.1| putative pentatricopeptide
            (PPR) repeat-containing protein [Oryza sativa Japonica
            Group] gi|113535253|dbj|BAF07636.1| Os02g0121900 [Oryza
            sativa Japonica Group] gi|125580614|gb|EAZ21545.1|
            hypothetical protein OsJ_05173 [Oryza sativa Japonica
            Group] gi|218189948|gb|EEC72375.1| hypothetical protein
            OsI_05641 [Oryza sativa Indica Group]
          Length = 624

 Score =  521 bits (1342), Expect = e-145
 Identities = 281/572 (49%), Positives = 375/572 (65%), Gaps = 15/572 (2%)
 Frame = -2

Query: 1988 NALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXASDLFEEML-ARAV 1812
            NALLR LA AG +R A  LFR IPSP+  S+NSLL           AS LF  +L + + 
Sbjct: 53   NALLRALAAAGRVRAAAALFRRIPSPTPHSFNSLLAALLRRGRRRAASALFAALLRSPSA 112

Query: 1811 RPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSR-----HGCAPDVVTYNTLLDGLCRAGEV 1647
             PD  T NTL+ G    S  H +      + R     +  APD ++YN+LL  LCRAG+V
Sbjct: 113  SPDAATLNTLLHGLSTASP-HPSTPALLRLFRFLPDTYAFAPDAISYNSLLSALCRAGDV 171

Query: 1646 RIAHKLLNGMRRNTPD----TAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNN 1479
              A KL +GMR    +      PNV++YTT+I+ YC+K            M++ G+ PN 
Sbjct: 172  LTARKLFDGMRVGGEEGRGAVFPNVITYTTMIKAYCAKRLVNEALAIFKLMVADGVAPNR 231

Query: 1478 ITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALK 1299
            ITYNT++QG C + RM+LVKE+L+          F PDTCTFNTL+A HC  G   DA+K
Sbjct: 232  ITYNTMVQGFCDAGRMELVKEVLEMDS-------FRPDTCTFNTLVAVHCREGRIEDAMK 284

Query: 1298 VFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYN 1122
            VF +M E++V  DS +Y ++IR LCENGEFG+AEEL+DELL KEVL++RGGC PL+A YN
Sbjct: 285  VFNQMVELRVRRDSASYSMVIRVLCENGEFGQAEELVDELLEKEVLKKRGGCTPLIAAYN 344

Query: 1121 PMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKR 942
            P+  YLC  GKT+KAR++  QLLD ++K D+ AFKT+ILG+C+EG F++GY LL+SM KR
Sbjct: 345  PVFVYLCEHGKTKKARMLFGQLLDRRSKVDVPAFKTLILGHCREGDFEEGYALLLSMLKR 404

Query: 941  DLVPDAEIYQILINGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKE 765
            DLVPD E Y  +I GF Q+  + FAWE L +M NS  RPST  FH VL+G++ K    KE
Sbjct: 405  DLVPDDECYIAVIEGFSQRGRMKFAWEALHRMLNSGLRPSTSTFHSVLLGLLNKDGCAKE 464

Query: 764  SGDLVIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLC 585
            + DL+ +MLER +R N+DLST +V+ LFR++ NDRA+KIV  LY+ GY +KME+L+ +LC
Sbjct: 465  AADLIEIMLERKIRQNVDLSTNLVDTLFRNNLNDRAYKIVTSLYDHGYYIKMEKLIANLC 524

Query: 584  KSRKFLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINS 405
            + +KF+EA +  LFSLEKS+     + + V++ LC  G+A EAF LFYE+ E   A  + 
Sbjct: 525  EEKKFIEAADFTLFSLEKSQNFGVAIPSMVLDGLCMTGRASEAFRLFYELIENRSALASV 584

Query: 404  SC---LCALKVALENGEKMNEAKFVAKQINRA 318
            +    L AL  ALE   KM EA F+A+Q+ RA
Sbjct: 585  AAPRSLVALHHALEESGKMKEADFIARQMRRA 616


>ref|XP_004952080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Setaria italica]
          Length = 620

 Score =  508 bits (1307), Expect = e-141
 Identities = 271/574 (47%), Positives = 377/574 (65%), Gaps = 13/574 (2%)
 Frame = -2

Query: 1988 NALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXASDLFEEMLARA-V 1812
            NALLR LA AG +R A  LFR IP+P+  S+NSLL           AS L    L     
Sbjct: 50   NALLRALAAAGRVRAATSLFRSIPAPTPHSFNSLLAALLRRGRRRAASALLAAFLRSPDA 109

Query: 1811 RPDVCTFNTLIRGFCLNS---MVHEAFHVFKEMSR-HGCAPDVVTYNTLLDGLCRAGEVR 1644
             PDV T NTL+ G    S     H    +F+ +   +  APD +TYN+LL  LCR G++ 
Sbjct: 110  SPDVTTLNTLLHGLSTASPRPSAHTLLKLFRFLPETYAFAPDAITYNSLLSALCRGGDLA 169

Query: 1643 IAHKLLNGMRRNTPDTAP----NVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNI 1476
             A KL +GM  +  D+      NVV+YTT+IR YC+K            M++ G+ PN +
Sbjct: 170  TARKLFDGMHVSEEDSKSGAFANVVTYTTMIRAYCAKGLADEALALFKVMVANGVPPNRV 229

Query: 1475 TYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKV 1296
            T+NT++QG C++ RM+LVKE+ +          F+PDTCTFNTL+AAH + G F DA+KV
Sbjct: 230  TFNTMVQGFCEAGRMELVKEVFEMES-------FKPDTCTFNTLMAAHYSEGRFEDAMKV 282

Query: 1295 FEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKE-VLRRRGGCLPLVATYNP 1119
            F++MTE+ V  DS +Y ++IR LCE+ EFGRAEEL+DE+L+E +L++RGG +PL+A YNP
Sbjct: 283  FDQMTELHVRRDSASYSMVIRALCESREFGRAEELVDEILEEELLKKRGGSVPLIAAYNP 342

Query: 1118 MLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRD 939
            +  Y C +GK +KARI+  QLLD ++K D +AFKT+ILG+CKEG F++ YEL++SM KRD
Sbjct: 343  VFVYFCENGKAKKARILFGQLLDRRSKVDFQAFKTLILGHCKEGNFEEAYELVLSMLKRD 402

Query: 938  LVPDAEIYQILINGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKES 762
            L+PD E Y  +I+GF+Q+  +  AWE L +M NS  RPST  FH VL+G++KK    KE+
Sbjct: 403  LIPDNECYIAVIDGFMQKGRMKSAWETLHRMLNSGLRPSTSTFHSVLLGLLKKDGCAKEA 462

Query: 761  GDLVIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCK 582
             DL+ +MLER +R N+DLST +++ LF+SD NDRA+KI K LY+ GY +KME+L+ +LC+
Sbjct: 463  ADLIEIMLERKIRQNVDLSTNLIDVLFKSDLNDRAYKITKRLYDNGYYIKMEKLIETLCE 522

Query: 581  SRKFLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSS 402
             +KF++A E  LFSL+K  ++   V++ V++ L   GKA EAF LFYE+ E G  S  ++
Sbjct: 523  DKKFIDAAEFTLFSLQKHHELGVAVHSLVLDGLSMDGKASEAFRLFYELIENGSTSAVAA 582

Query: 401  --CLCALKVALENGEKMNEAKFVAKQINRAVDEV 306
               +  L  ALE   KM EA FV KQ++RA   +
Sbjct: 583  PRSVILLHHALEEAGKMKEADFVGKQMSRATARI 616


>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  505 bits (1300), Expect = e-140
 Identities = 299/664 (45%), Positives = 402/664 (60%), Gaps = 8/664 (1%)
 Frame = -2

Query: 2294 AIADLVNAEATDSWPPSLPASLTALVRSHTHALSPSDLLHSLYLLRRPNAAGHLLLWSLN 2115
            A+A L+N   T+ W   L +SL  L  S    LS + +L +L L+R P  A H   W   
Sbjct: 161  AMARLIN---TEPWSHELQSSLAELAPS----LSKTTVLQTLQLIRTPAKALHFFRW--- 210

Query: 2114 LVPLEPAVTGKVIYLLL-----RSRXXXXXXXXXXXXXXXXXXXXSFNALLRRLATAGHL 1950
             V  +     +  Y L+     RSR                       ++ ++   A  +
Sbjct: 211  -VEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVF-------------SIEKKSGGAESI 256

Query: 1949 RYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXASDLFEEML-ARAVRPDVCTFNTLIRG 1773
            +    +  +  SPSV ++NSLL           A  LF+EML    V PD  TFN LIRG
Sbjct: 257  KVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRG 316

Query: 1772 FCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNGMRRNTPDTA 1593
            FC+NSMV E F  FKEMSR  C PDVVTYNTL+DGLCRAG+V+IAH ++ GM + +P+ +
Sbjct: 317  FCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLS 376

Query: 1592 PNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCKSRRMDLVKEL 1413
            PNVV+YTTLIRGYC K           +M+S GL+PN ITYNTLIQGLC+++++D +KE+
Sbjct: 377  PNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEI 436

Query: 1412 LDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLDSVTYGILIR 1233
            L+ G  GD    F PDTCT NTLI AHC MG   +A  VFEKM+E++V  DS TY +L+R
Sbjct: 437  LE-GMVGDGG--FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVR 493

Query: 1232 GLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPMLNYLCHSGKTEKARIVLQQL 1056
             LC+ G+F RAEE  DEL  KE+L    GC PLVA YNPM  YLC +GKT+KA  V +QL
Sbjct: 494  SLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL 553

Query: 1055 LDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPDAEIYQILINGFLQQNID 876
            +  +   D  ++KT+ILG+C+EG  + G++LLV M +RD VPDAE Y ++I+G L++   
Sbjct: 554  M-KRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDP 612

Query: 875  -FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLVIVMLERSVRPNIDLSTK 699
              A + L KM  S H P+T  FH +L  +V+K               ER +R NIDLST 
Sbjct: 613  VLAHKSLEKMLKSSHLPTTAIFHSILAALVEK---------------ERRIRQNIDLSTH 657

Query: 698  VVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKFLEAREMLLFSLEKSEKI 519
             V  L++S   D+AF  + LLYE GY +KMEELV  LC+SRK LEA++MLLFSLEK + +
Sbjct: 658  TVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSV 717

Query: 518  SNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENGEKMNEAKFV 339
              D+ +TVI+ LC   K  EAF L+YE+ E+G      +C   L+++LE   ++NEAKFV
Sbjct: 718  DIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQH-RLTCQEDLRISLEAEGRLNEAKFV 776

Query: 338  AKQI 327
            +K++
Sbjct: 777  SKKM 780


>ref|NP_001169582.1| hypothetical protein [Zea mays] gi|224030203|gb|ACN34177.1| unknown
            [Zea mays] gi|413935329|gb|AFW69880.1| hypothetical
            protein ZEAMMB73_684747 [Zea mays]
          Length = 622

 Score =  504 bits (1298), Expect = e-140
 Identities = 274/570 (48%), Positives = 369/570 (64%), Gaps = 13/570 (2%)
 Frame = -2

Query: 1988 NALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXASDLFEEML-ARAV 1812
            NALLR LA AG +R A  LFR IP+P+  S+NS L           AS L    L     
Sbjct: 52   NALLRALAAAGRVRAAASLFRAIPAPTPHSFNSFLAALLRRGRRRAASALLAAFLRCPGA 111

Query: 1811 RPDVCTFNTLIRGFCLNSMVHEA---FHVFKEMSR-HGCAPDVVTYNTLLDGLCRAGEVR 1644
             PDV T NTLI G    S    +     +F+ +   +  APD +TYN++L  LCRAG++ 
Sbjct: 112  SPDVATLNTLIHGLSTASPRPSSPALLRLFRFLPEAYAFAPDAITYNSMLAALCRAGDLA 171

Query: 1643 IAHKLLNGMRRNTPD----TAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNI 1476
             A +L +GMR           PNVV+YTT+IR  C+             M++ G++PN I
Sbjct: 172  TARRLFDGMRAGEQGGEAGAFPNVVAYTTMIRACCASRLADEALSLFKMMLADGVRPNRI 231

Query: 1475 TYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKV 1296
            TYNT++QG C++ RM+LVKE+            F+PDTCTFNTL+AAHC  G   DA KV
Sbjct: 232  TYNTMVQGFCQAGRMELVKEVFGMDS-------FKPDTCTFNTLMAAHCREGRIQDAKKV 284

Query: 1295 FEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNP 1119
            F++M E++V  DS +Y I+ R LCENGEFGRAEEL+D LL KEVL++RGGC+PL+A+YNP
Sbjct: 285  FDQMMELRVRRDSASYSIVTRALCENGEFGRAEELVDSLLEKEVLKKRGGCVPLIASYNP 344

Query: 1118 MLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRD 939
            +  YLC +GK +KAR++  QLLD ++K D  AFKT+ILG+CKEG F++GYEL++SM KRD
Sbjct: 345  VFKYLCENGKAKKARLLFGQLLDIRSKVDFLAFKTLILGHCKEGDFEEGYELVLSMLKRD 404

Query: 938  LVPDAEIYQILINGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKES 762
            L+PD+E Y  +I+GF+Q+  +  AWE L +M NS  RPST  FH VL+G++KK    KE+
Sbjct: 405  LMPDSECYIAVIDGFMQKGRMKSAWEALHRMLNSGLRPSTSTFHSVLLGLLKKDGCAKEA 464

Query: 761  GDLVIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCK 582
             DL+ +MLER +R N+DLST ++  LF+SD NDRA+KI K LY+ GY +KME+L+ +LC+
Sbjct: 465  ADLIEIMLERKIRQNVDLSTNLIGVLFKSDLNDRAYKITKHLYDNGYYIKMEKLIATLCE 524

Query: 581  SRKFLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKE--RGCASIN 408
             +KF++A E  LFSL K  ++   V++ V++ LCS  +  EAF LFYE+ E  R  A   
Sbjct: 525  DKKFIDAAEFSLFSLRKRHELGVAVHSQVLDGLCSDRRTSEAFQLFYELNENKRTSAVAA 584

Query: 407  SSCLCALKVALENGEKMNEAKFVAKQINRA 318
               L  L  ALE    + EA FVAKQ+ RA
Sbjct: 585  PRSLVFLHHALEEAGMVQEAGFVAKQMRRA 614


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  497 bits (1280), Expect = e-138
 Identities = 259/562 (46%), Positives = 375/562 (66%), Gaps = 7/562 (1%)
 Frame = -2

Query: 1991 FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXASDLFEEML 1824
            FN+L+R    AG  + ++++F ++ S    PSV ++NSLL           A  +++EML
Sbjct: 152  FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 1823 AR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 1647
            +   V PD  TFN LIRGFC+N MV + F +F ++SR GC PDVVTYNTL+DGLCRAG+V
Sbjct: 212  STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271

Query: 1646 RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYN 1467
             +A+ ++ GM + + D  PNVV+YTTLIRGYC+K           +M++ GL+ NNITYN
Sbjct: 272  TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331

Query: 1466 TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 1287
            TLI+GLC++R+ + +K++L+ G  GD    F PDTCTFNTL+  HC+ G   DALKVFE+
Sbjct: 332  TLIKGLCEARKFEKIKDILE-GTAGDG--TFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 1286 MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPMLN 1110
            M+E+++  DS TY  L+R LC+ G + +AE+L+D+LL +++L    GC PLVA YNP+  
Sbjct: 389  MSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFK 448

Query: 1109 YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVP 930
            YLC +GKT+KA    +QL+  +   D  ++KT+I+G+CKEG F+ GYELLV M ++D +P
Sbjct: 449  YLCETGKTKKAEKAFRQLM-RRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLP 507

Query: 929  DAEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 753
            D E Y+ LING L  +    A + L KM  S HRP++  FH +L  ++++ + T ES  L
Sbjct: 508  DFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGR-TSESASL 566

Query: 752  VIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 573
            + +ML++++R N+  ST  V  LF +  ND+AF++V LLY KGY +KMEEL+  LC  RK
Sbjct: 567  IQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRK 626

Query: 572  FLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 393
             ++  ++LLFSLE  + +  D+  TVI +LC   K  EAF L+Y++ E G      SC  
Sbjct: 627  VIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQ-QLSCQN 685

Query: 392  ALKVALENGEKMNEAKFVAKQI 327
             LKV+LE GEK+ EA+FV+K++
Sbjct: 686  QLKVSLEAGEKLEEAEFVSKRM 707


>gb|EMJ20355.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
          Length = 721

 Score =  496 bits (1277), Expect = e-137
 Identities = 294/673 (43%), Positives = 401/673 (59%), Gaps = 18/673 (2%)
 Frame = -2

Query: 2285 DLVNAEATDSWPPSLPASLTALVRSHTHALSPSDLLHSLYLLRRPNAAGHLLLWSLNLVP 2106
            D+     T++W   L +SL+ +  S    LS + +  +L+L++ P+ A     W    V 
Sbjct: 51   DMARLVNTNTWSSELESSLSTISSS----LSKTTVHQTLHLIKTPHKALQFFKW----VE 102

Query: 2105 LEPAVTGKVIYLL----------LRSRXXXXXXXXXXXXXXXXXXXXSFNALLRRLATAG 1956
            +         Y L          L +                      FN+L+R    AG
Sbjct: 103  VMGFSHNDQSYFLMLEILGRARNLNAARNLLFSIEKRSNGAVKLEDRFFNSLIRNYGRAG 162

Query: 1955 HLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXASDLFEEMLAR-AVRPDVCTF 1791
              + +++LF  + S    PSV S+NSLL           A ++++EML+   V PD  TF
Sbjct: 163  LFQESIKLFTTMKSLGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTF 222

Query: 1790 NTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNGMRR 1611
            N LIRGFC+NSMV E +  FK+MS   C PDV+TYNTL+DGLCRAG+V IAH ++NGM +
Sbjct: 223  NILIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMSK 282

Query: 1610 NTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCKSRRM 1431
             + D  PNVV+YTTLIRGYC K           +M + GL+PN  TYNTLI+GLC+++++
Sbjct: 283  RSGDLTPNVVTYTTLIRGYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKL 342

Query: 1430 DLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLDSVT 1251
            D +KE+ +    G E   F PDTCTFNTL+ +HCN G   +ALKVF KM+E++V  DS T
Sbjct: 343  DKIKEIFEGTMIGGE---FTPDTCTFNTLMHSHCNAGNLDEALKVFAKMSELKVPPDSAT 399

Query: 1250 YGILIRGLCENGEFGRAEELIDEL-LKEVLRRRGGCLPLVATYNPMLNYLCHSGKTEKAR 1074
            Y +LI  LC+ G++ RAEEL DEL  KE+L R  GC PLVA+YNP+  YL  +GKT+KA 
Sbjct: 400  YSVLICSLCQRGDYPRAEELFDELSKKEILLRDDGCKPLVASYNPIFGYLSSNGKTQKAE 459

Query: 1073 IVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPDAEIYQILINGF 894
             V +QL+  +   D  ++KT+I+G CKEG ++ GYELLV M +RD VPD EIY  LI+G 
Sbjct: 460  EVFRQLM-RRGTQDPLSYKTLIMGNCKEGTYEAGYELLVWMLRRDFVPDEEIYVSLIDGL 518

Query: 893  LQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLVIVMLERSVRPN 717
            LQ+     A + L KM  S H P T  FH +L  ++K+     ES   V +MLE+ +R N
Sbjct: 519  LQKGKPLLAQQTLEKMLKSSHLPQTSTFHSLLAELLKQ-HCAHESASFVTLMLEKKIRQN 577

Query: 716  IDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKFLEAREMLLFSL 537
            I+LST +V  LF     D+AF+IV +LYE GY +KMEELV  LC+SRK LEA EML FSL
Sbjct: 578  INLSTHLVRLLFSHGLRDKAFEIVGMLYENGYSIKMEELVCFLCQSRKLLEACEMLQFSL 637

Query: 536  EKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKE-RGCASINSSCLCALKVALENGEK 360
            +K + +  D +  VI  LC   K  EAF L+YE+ E +G   +   CL +LK ALE   +
Sbjct: 638  QKHQSVDIDNFNQVIVGLCDINKLSEAFGLYYELVENKGYQQL--PCLDSLKSALEVAGR 695

Query: 359  MNEAKFVAKQINR 321
              EA+F++K+I R
Sbjct: 696  SVEAEFLSKRIPR 708


>ref|XP_003573599.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Brachypodium distachyon]
          Length = 627

 Score =  496 bits (1277), Expect = e-137
 Identities = 268/574 (46%), Positives = 377/574 (65%), Gaps = 13/574 (2%)
 Frame = -2

Query: 1988 NALLRRLATAGHLRYAVRLFRLIPSPSVFSYNSLLXXXXXXXXXXXASDLFEEML-ARAV 1812
            NALLR LA AG +R A  LFR IP+P+  S+NSLL           A+ L    L +R  
Sbjct: 57   NALLRALAAAGRVRAATDLFRRIPTPTPHSFNSLLSALLRRGRLRAANALLAAFLRSRTA 116

Query: 1811 RPDVCTFNTLIRGFCL---NSMVHEAFHVFKEMSR-HGCAPDVVTYNTLLDGLCRAGEVR 1644
             PD  T NTL+ G       +      ++F+ +   +  APD V+YN+LL  LCRAG++ 
Sbjct: 117  SPDAATLNTLLHGLSAAAPRASPPALVNLFRFLPETYAFAPDAVSYNSLLCALCRAGDLP 176

Query: 1643 IAHKLLNGMRRNTP----DTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNI 1476
             A KL + MR           P+VV+YTT+IR YC++            M + G+ PN I
Sbjct: 177  AARKLFDVMRVRATGGNGSVPPDVVTYTTMIRAYCARRLADEALAVFRMMAADGVPPNRI 236

Query: 1475 TYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKV 1296
            TYNT++QG C+  R+DLVK LL+          F+PDTCTFNTL+A HC  G   +A++V
Sbjct: 237  TYNTMVQGFCEVGRVDLVKGLLETDS-------FKPDTCTFNTLMATHCREGQVKEAMEV 289

Query: 1295 FEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNP 1119
            F +M E++V  DS +Y  +IRGLCENGEF RAEEL+DEL+ KEVL++RGGC+PL+A YNP
Sbjct: 290  FGQMVELRVSRDSASYSTVIRGLCENGEFVRAEELVDELVEKEVLKKRGGCVPLIAAYNP 349

Query: 1118 MLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRD 939
            +  YLC +GK  KAR++  QLLD ++K D  AFKT+ILG+CKEG F++GY+L++SM KRD
Sbjct: 350  VFVYLCENGKANKARVLFGQLLDQRSKVDFAAFKTLILGHCKEGDFEEGYQLVLSMLKRD 409

Query: 938  LVPDAEIYQILINGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKES 762
            LVPD E Y  +++GF ++  +  AWE L +M +S  RPST  FH VL+G++KK    KE+
Sbjct: 410  LVPDDECYIAVVDGFSRRGRMKIAWEALHRMLDSGLRPSTSTFHSVLLGLLKKDGCAKEA 469

Query: 761  GDLVIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCK 582
             DL+ +MLER++R N+DLST ++++L +S+ N+RA++I+  LY+ GY +KME L+ SLC+
Sbjct: 470  ADLIEIMLERNIRQNLDLSTNMIDSLLKSNLNERAYRIITSLYDHGYYIKMETLIESLCE 529

Query: 581  SRKFLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYE-IKERG-CASIN 408
             +KF+EA E+ LFSL+K  ++   V + V++ LC+ G+A +AF LFYE I+ RG  A++ 
Sbjct: 530  EKKFIEAAELTLFSLQKHHELGVAVCSMVLDGLCTAGRASDAFRLFYELIENRGTSAAVA 589

Query: 407  SSCLCALKVALENGEKMNEAKFVAKQINRAVDEV 306
             S L AL  AL+   KM EA F+AKQ+ RA   +
Sbjct: 590  PSSLVALYHALKEDGKMKEADFIAKQMRRAAARI 623


>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
            gi|550323558|gb|ERP53036.1| hypothetical protein
            POPTR_0014s05550g [Populus trichocarpa]
          Length = 728

 Score =  493 bits (1268), Expect = e-136
 Identities = 267/561 (47%), Positives = 364/561 (64%), Gaps = 7/561 (1%)
 Frame = -2

Query: 1988 NALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXASDLFEEMLA 1821
            N LLR    AG    A++LF L+ S    PSV ++NSLL           A  +F+EM  
Sbjct: 165  NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG 224

Query: 1820 R-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVR 1644
               V PD  TFN LIRGFC NSMV E F  FKEMSR  C PDVVTYNTL+DGLCRAG+VR
Sbjct: 225  TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 284

Query: 1643 IAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNT 1464
            IAH ++ GM +   D +P+VV+YTTL+RGYC K           +M+S GL+PN+ITYNT
Sbjct: 285  IAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNT 344

Query: 1463 LIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKM 1284
            LI+GLC+ ++ D +KE+L     G     F PDTCT+NTL+ A C+ G F +ALK+F+KM
Sbjct: 345  LIKGLCEVQKFDKIKEILGGAVGGRG---FVPDTCTYNTLMNAQCDAGNFDEALKMFKKM 401

Query: 1283 TEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKE-VLRRRGGCLPLVATYNPMLNY 1107
             E++V  DS TY +LIR LC+ G+F RAE+L D+L  E +L R  GC PLVA YNP+ ++
Sbjct: 402  KELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDF 461

Query: 1106 LCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPD 927
            LC +GKT KA  V +QL+  K   D  ++KT+I+G+CKEG F+ GY+LL+ M +RD VPD
Sbjct: 462  LCKNGKTHKAERVFRQLM-KKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPD 520

Query: 926  AEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLV 750
             E Y +LINGFLQ+     A++ L +M  S + P T  FH +L  ++ K+ + +ES   V
Sbjct: 521  FETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELL-KNDFARESASFV 579

Query: 749  IVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKF 570
            ++M++R +R NI+LST  +  LF S    +AF+IV+LLY+ GY + MEEL+  +C++ K 
Sbjct: 580  VLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGFICQNGKL 639

Query: 569  LEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCA 390
            L+A++ML F LEK   +  +V   VI  LC   + LEAF L+Y + E+       SCL  
Sbjct: 640  LDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQ-QLSCLEG 698

Query: 389  LKVALENGEKMNEAKFVAKQI 327
            L+ ALE G +  EAKFV+K++
Sbjct: 699  LRTALEAGGRSEEAKFVSKRM 719



 Score =  147 bits (370), Expect = 3e-32
 Identities = 121/496 (24%), Positives = 218/496 (43%), Gaps = 13/496 (2%)
 Frame = -2

Query: 1748 EAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNGMRRNTPDTAPNVVSY-T 1572
            +AF  F   SR+G A D  +Y  +LD L R G + IA   L  + R +  +      +  
Sbjct: 106  KAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCN 165

Query: 1571 TLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCKSRRMDLVKELLDR--GK 1398
            TL+R Y +             M S G+ P+ IT+N+L+  L K  R ++   + D   G 
Sbjct: 166  TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT 225

Query: 1397 NGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLDSVTYGILIRGLCEN 1218
             G       PDT TFN LI   C      +  + F++M+    + D VTY  L+ GLC  
Sbjct: 226  YG-----VTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRA 280

Query: 1217 GEFGRAEELIDELLKEVLRRRGGCLPLVATYNPMLNYLCHSGKTEKARIVLQQLLDNKAK 1038
            G+   A  ++    K ++++     P V TY  ++   C   + ++A +V ++++    K
Sbjct: 281  GKVRIAHNVV----KGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLK 336

Query: 1037 FDLEAFKTVILGYCKEGKFKKGYELL-VSMSKRDLVPDAEIYQILINGFLQQ-NIDFAWE 864
             +   + T+I G C+  KF K  E+L  ++  R  VPD   Y  L+N      N D A +
Sbjct: 337  PNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALK 396

Query: 863  VLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTK------ESGDLVIVMLERSVRPNIDLST 702
            + +KM   K +P +  + +++  + ++  + +      +  D  I++ +    P +    
Sbjct: 397  MFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYN 456

Query: 701  KVVENLFRSDSNDRAFKIVKLLYEKGYR--LKMEELVVSLCKSRKFLEAREMLLFSLEKS 528
             + + L ++    +A ++ + L +KG +     + L++  CK   F    ++LLF L + 
Sbjct: 457  PIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRD 516

Query: 527  EKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENGEKMNEA 348
                 + Y  +IN    KG+ + A+     + +       S     L   L+N      A
Sbjct: 517  YVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESA 576

Query: 347  KFVAKQINRAVDEVAN 300
             FV   I+R + +  N
Sbjct: 577  SFVVLMIDRKIRQNIN 592


>ref|XP_002326829.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  493 bits (1268), Expect = e-136
 Identities = 267/561 (47%), Positives = 364/561 (64%), Gaps = 7/561 (1%)
 Frame = -2

Query: 1988 NALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXASDLFEEMLA 1821
            N LLR    AG    A++LF L+ S    PSV ++NSLL           A  +F+EM  
Sbjct: 101  NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG 160

Query: 1820 R-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVR 1644
               V PD  TFN LIRGFC NSMV E F  FKEMSR  C PDVVTYNTL+DGLCRAG+VR
Sbjct: 161  TYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVR 220

Query: 1643 IAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNT 1464
            IAH ++ GM +   D +P+VV+YTTL+RGYC K           +M+S GL+PN+ITYNT
Sbjct: 221  IAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNT 280

Query: 1463 LIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKM 1284
            LI+GLC+ ++ D +KE+L     G     F PDTCT+NTL+ A C+ G F +ALK+F+KM
Sbjct: 281  LIKGLCEVQKFDKIKEILGGAVGGRG---FVPDTCTYNTLMNAQCDAGNFDEALKMFKKM 337

Query: 1283 TEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLKE-VLRRRGGCLPLVATYNPMLNY 1107
             E++V  DS TY +LIR LC+ G+F RAE+L D+L  E +L R  GC PLVA YNP+ ++
Sbjct: 338  KELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDF 397

Query: 1106 LCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPD 927
            LC +GKT KA  V +QL+  K   D  ++KT+I+G+CKEG F+ GY+LL+ M +RD VPD
Sbjct: 398  LCKNGKTHKAERVFRQLM-KKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPD 456

Query: 926  AEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLV 750
             E Y +LINGFLQ+     A++ L +M  S + P T  FH +L  ++ K+ + +ES   V
Sbjct: 457  FETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELL-KNDFARESASFV 515

Query: 749  IVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKF 570
            ++M++R +R NI+LST  +  LF S    +AF+IV+LLY+ GY + MEEL+  +C++ K 
Sbjct: 516  VLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGFICQNGKL 575

Query: 569  LEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCA 390
            L+A++ML F LEK   +  +V   VI  LC   + LEAF L+Y + E+       SCL  
Sbjct: 576  LDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQ-QLSCLEG 634

Query: 389  LKVALENGEKMNEAKFVAKQI 327
            L+ ALE G +  EAKFV+K++
Sbjct: 635  LRTALEAGGRSEEAKFVSKRM 655



 Score =  147 bits (370), Expect = 3e-32
 Identities = 121/496 (24%), Positives = 218/496 (43%), Gaps = 13/496 (2%)
 Frame = -2

Query: 1748 EAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNGMRRNTPDTAPNVVSY-T 1572
            +AF  F   SR+G A D  +Y  +LD L R G + IA   L  + R +  +      +  
Sbjct: 42   KAFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCN 101

Query: 1571 TLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCKSRRMDLVKELLDR--GK 1398
            TL+R Y +             M S G+ P+ IT+N+L+  L K  R ++   + D   G 
Sbjct: 102  TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT 161

Query: 1397 NGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLDSVTYGILIRGLCEN 1218
             G       PDT TFN LI   C      +  + F++M+    + D VTY  L+ GLC  
Sbjct: 162  YG-----VTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRA 216

Query: 1217 GEFGRAEELIDELLKEVLRRRGGCLPLVATYNPMLNYLCHSGKTEKARIVLQQLLDNKAK 1038
            G+   A  ++    K ++++     P V TY  ++   C   + ++A +V ++++    K
Sbjct: 217  GKVRIAHNVV----KGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLK 272

Query: 1037 FDLEAFKTVILGYCKEGKFKKGYELL-VSMSKRDLVPDAEIYQILINGFLQQ-NIDFAWE 864
             +   + T+I G C+  KF K  E+L  ++  R  VPD   Y  L+N      N D A +
Sbjct: 273  PNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALK 332

Query: 863  VLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTK------ESGDLVIVMLERSVRPNIDLST 702
            + +KM   K +P +  + +++  + ++  + +      +  D  I++ +    P +    
Sbjct: 333  MFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYN 392

Query: 701  KVVENLFRSDSNDRAFKIVKLLYEKGYR--LKMEELVVSLCKSRKFLEAREMLLFSLEKS 528
             + + L ++    +A ++ + L +KG +     + L++  CK   F    ++LLF L + 
Sbjct: 393  PIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRD 452

Query: 527  EKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENGEKMNEA 348
                 + Y  +IN    KG+ + A+     + +       S     L   L+N      A
Sbjct: 453  YVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESA 512

Query: 347  KFVAKQINRAVDEVAN 300
             FV   I+R + +  N
Sbjct: 513  SFVVLMIDRKIRQNIN 528


>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 718

 Score =  490 bits (1261), Expect = e-135
 Identities = 283/674 (41%), Positives = 400/674 (59%), Gaps = 13/674 (1%)
 Frame = -2

Query: 2309 SELGHAIADLVNAEATDSWPPSLPASLTALVRSHTHALSPSDLLHSLYLLRRPNAAGHLL 2130
            S+    IA ++N   T+ W   L +SL++L +    +LS + +LH+L  ++ P  A +  
Sbjct: 53   SKKARNIASIIN---TNPWSSHLESSLSSLTQP---SLSHTTVLHTLRFIKIPFKALYFF 106

Query: 2129 LWSLNLVPLEPAVTGKVIYLLL------RSRXXXXXXXXXXXXXXXXXXXXSFNALLRRL 1968
             W+  +       +  ++  LL       S                      FN L++  
Sbjct: 107  NWTQKMGFQHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNGTVPLQDRYFNTLIQSY 166

Query: 1967 ATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXASDLFEEMLAR-AVRPD 1803
              AG  + ++++F+++ S    PSV ++NSL              +LF+EML     +PD
Sbjct: 167  GKAGLFQESLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEMLKTFGAKPD 226

Query: 1802 VCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLN 1623
            V TFN LIRGFC+NSMV + F  FKEM RH C PDV+TYNT++DGLCRAG+V IAH +L 
Sbjct: 227  VYTFNILIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLK 286

Query: 1622 GMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCK 1443
            GM +     +PNVVSYTTL+RGYC K           +MI  GL+P +ITYNTL+QGLC+
Sbjct: 287  GMVKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCE 346

Query: 1442 SRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDL 1263
            ++R D +KE+L+ G  G   L+  PDTCTFNTLI  HCN+G   +A+KVFE M  ++V  
Sbjct: 347  AKRFDRIKEILE-GTLGSGGLI--PDTCTFNTLITFHCNVGNLDEAVKVFENMLYLKVKP 403

Query: 1262 DSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPMLNYLCHSGKT 1086
            DS TY ILIR  C+ G F RAE+L D+L+ KE+L R  GC PL+A YNPM  Y C  GKT
Sbjct: 404  DSATYSILIRSFCQKGYFDRAEKLFDDLMKKEILLRDDGCTPLIAAYNPMFEYFCKIGKT 463

Query: 1085 EKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPDAEIYQIL 906
            +KA  V +QL+  +   D  A++ +I+G+CKEG F   +ELLV M +RD VP+  IY+ L
Sbjct: 464  KKAEKVFRQLM-RRGTQDPFAYELLIMGHCKEGTFNDAHELLVLMLRRDYVPNIVIYESL 522

Query: 905  INGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLVIVMLERS 729
            I G LQ+N    A++ L KM  S H P +  FH +L  ++KK+    E   LV +ML+  
Sbjct: 523  IEGLLQKNDPKVAYDTLEKMLKSSHLPRSSTFHQILTELIKKN-CASECASLVTLMLDNK 581

Query: 728  VRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKFLEAREML 549
            VR NI+LST  V  LF++   +RAF+IV+ LYE  Y + ME LV  LC+ RK LEA ++L
Sbjct: 582  VRQNINLSTDTVRILFQAGLRERAFEIVRCLYENEYVVDMEGLVAFLCQCRKLLEACKLL 641

Query: 548  LFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALEN 369
            LFS  K   ++ D  +T+++ LC   + LEAF+++YE+ E+G       C+  L +ALE 
Sbjct: 642  LFSSSKGHILNVDTCSTLLSALCKASRTLEAFEIYYELLEKGVQQ-PLECVEELGLALET 700

Query: 368  GEKMNEAKFVAKQI 327
              +  EA+FV K+I
Sbjct: 701  EGRTKEAEFVKKRI 714


>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  489 bits (1259), Expect = e-135
 Identities = 298/673 (44%), Positives = 398/673 (59%), Gaps = 17/673 (2%)
 Frame = -2

Query: 2294 AIADLVNAEATDSWPPSLPASLTALVRSHTHALSPSDLLHSLYLLRRPNAAGHLLLWSLN 2115
            A+A L+N   T+ W   L +SL  L  S    LS + +L +L L+R P  A H   W   
Sbjct: 68   AMARLIN---TEPWSHELQSSLAELAPS----LSKTTVLQTLQLIRTPAKALHFFRW--- 117

Query: 2114 LVPLEPAVTGKVIYLLL-----RSRXXXXXXXXXXXXXXXXXXXXS-----FNALLRRLA 1965
             V  +     +  Y L+     RSR                          FN+L+R   
Sbjct: 118  -VEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYG 176

Query: 1964 TAGHLRYAVRLFRLIP----SPSVFSYNSLLXXXXXXXXXXXASDLFEEML-ARAVRPDV 1800
             AG  + ++++F+ +     SPSV ++NSLL           A  LF+EML    V PD 
Sbjct: 177  WAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDT 236

Query: 1799 CTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNG 1620
             TFN LIRGFC+NSMV E F  FKEMSR  C PDVVTYNTL+DGLCRAG+V+IAH ++ G
Sbjct: 237  YTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKG 296

Query: 1619 MRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCKS 1440
            M + +P+ +PNVV+YTTLIRGYC K           +M+S GL+PN ITYNTLIQGLC++
Sbjct: 297  MVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEA 356

Query: 1439 RRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLD 1260
            +++D +KE+L+ G  GD    F PDTCT NTLI AHC MG   +A  VFEKM+E++V  D
Sbjct: 357  QKLDKIKEILE-GMVGDGG--FIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPD 413

Query: 1259 SVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPMLNYLCHSGKTE 1083
            S TY +L+R LC+ G+F RAEE  DEL  KE+L    GC PLVA YNPM  YLC +GKT+
Sbjct: 414  SATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTK 473

Query: 1082 KARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPDAEIYQILI 903
            KA  V +QL+  +   D  ++KT+ILG+C+EG  + G++LLV M +RD VPDAE Y ++I
Sbjct: 474  KAERVFRQLM-KRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMI 532

Query: 902  NGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLVIVMLERSV 726
            +G L++     A + L KM  S H P+T  FH +L  +V+K     ES  LV +MLER +
Sbjct: 533  DGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKG-CAHESASLVKLMLERRI 591

Query: 725  RPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKFLEAREMLL 546
            R NIDLST                              MEELV  LC+SRK LEA++MLL
Sbjct: 592  RQNIDLSTHT----------------------------MEELVSFLCQSRKLLEAQKMLL 623

Query: 545  FSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENG 366
            FSLEK + +  D+ +TVI+ LC   K  EAF L+YE+ E+G      +C   L+++LE  
Sbjct: 624  FSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQH-RLTCQEDLRISLEAE 682

Query: 365  EKMNEAKFVAKQI 327
             ++NEAKFV+K++
Sbjct: 683  GRLNEAKFVSKKM 695


>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
          Length = 786

 Score =  488 bits (1257), Expect = e-135
 Identities = 287/659 (43%), Positives = 393/659 (59%), Gaps = 13/659 (1%)
 Frame = -2

Query: 2264 TDSWPPSLPASLTALVRSHTHALSPSDLLHSLYLLRRPNAAGHLLLWSLNL-VPLEPAVT 2088
            T+ W   L +SL++L       LS + +L +L L+  P+ A     W   +         
Sbjct: 117  TNPWSTDLESSLSSLF---PFPLSKTTVLQTLRLITSPSKAFQFFKWVPQMGFSHNDQSC 173

Query: 2087 GKVIYLLLRSRXXXXXXXXXXXXXXXXXXXXS-----FNALLRRLATAGHLRYAVRLF-- 1929
              ++ +L RSR                          FN+L+R    AG  + +V+LF  
Sbjct: 174  FMMLEILGRSRNLNAARNFLFSIEKKSNGSVKLEDRFFNSLIRSYGNAGLFQESVKLFST 233

Query: 1928 --RLIPSPSVFSYNSLLXXXXXXXXXXXASDLFEEMLAR-AVRPDVCTFNTLIRGFCLNS 1758
               L  +PSV ++NSLL           A ++F+EML    V PD  TFN LIRGFC+NS
Sbjct: 234  MKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNVLIRGFCMNS 293

Query: 1757 MVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNGMRRNTPDTAPNVVS 1578
            MV E FH FKEMSR  C PDVVTYNTL+DGLCRAG+V IA  ++ GM + + D  PN+V+
Sbjct: 294  MVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVT 353

Query: 1577 YTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCKSRRMDLVKELLDRGK 1398
            YTTLI+GYC K           +M   GL+PN ITYNTLI+GLC+++++D V+++LD   
Sbjct: 354  YTTLIKGYCGKQEIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTM 413

Query: 1397 NGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLDSVTYGILIRGLCEN 1218
               E   F P+TCTFNTLI  HC  G   +ALKVFEKM E+QV  DS TY  LIR LC+ 
Sbjct: 414  RRGE---FVPNTCTFNTLIHTHCQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQR 470

Query: 1217 GEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPMLNYLCHSGKTEKARIVLQQLLDNKA 1041
            G++ RAEEL D+L  KE+L    GC P+VA YNPM  +LC +GKT+KA  V +QL+  + 
Sbjct: 471  GDYIRAEELFDKLSDKEILLSDDGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQLM-KRG 529

Query: 1040 KFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPDAEIYQILINGFLQQNID-FAWE 864
              D  ++KT+I+G+C+EG F+ GYELLV M +RD VPDAEIY+ LI G LQ++    A  
Sbjct: 530  TQDPPSYKTLIMGHCREGTFEAGYELLVLMLRRDFVPDAEIYESLITGLLQKDKPLLAKT 589

Query: 863  VLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLVIVMLERSVRPNIDLSTKVVENL 684
             L KM  S H P   AFH +L  ++KK    KES     +MLE+  R NI LST ++  L
Sbjct: 590  TLEKMLRSSHLPRASAFHCILEELLKKG-CAKESASFATLMLEQKFRQNITLSTNLITLL 648

Query: 683  FRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKFLEAREMLLFSLEKSEKISNDVY 504
            F +   D+AF+++K+LYE GY +K+EELV  LC+  K LEA ++L FSL+K++ +  +++
Sbjct: 649  FSNGLGDKAFELIKVLYESGYSVKIEELVSFLCQKSKLLEACKLLQFSLQKNQSVGIEIF 708

Query: 503  ATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENGEKMNEAKFVAKQI 327
              VI  L    +  EAFDL+Y++ E+G       CL  LK AL+   +  EA FV+K++
Sbjct: 709  NKVIGGLSKIRRVSEAFDLYYKLVEKG-VHHRLVCLEDLKTALKLAGRSAEADFVSKRM 766


>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  488 bits (1257), Expect = e-135
 Identities = 256/564 (45%), Positives = 371/564 (65%), Gaps = 7/564 (1%)
 Frame = -2

Query: 1991 FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXASDLFEEML 1824
            FN+L+R    AG  + ++++F ++ S    PSV ++NSLL           A  +++EML
Sbjct: 152  FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 1823 AR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 1647
            +   V PD  TFN LIRGFC+N MV + F +F ++SR GC PDVVTYNTL+DGLCRAG+V
Sbjct: 212  STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271

Query: 1646 RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYN 1467
             +A+ ++ GM + + D  PNVV+YTTLIRGYC+K           +M++ GL+ NNITYN
Sbjct: 272  TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331

Query: 1466 TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 1287
            TLI+GLC++R+ + +K++L+ G  GD    F PDTCTFNTL+  HC+ G   DALKVFE+
Sbjct: 332  TLIKGLCEARKFEKIKDILE-GTAGDG--TFSPDTCTFNTLMHCHCHAGNLDDALKVFER 388

Query: 1286 MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPMLN 1110
            M+E+++  DS TY  L+R LC+ G + +AE+L+D+LL +++L    GC PLVA YNP+  
Sbjct: 389  MSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFK 448

Query: 1109 YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVP 930
            YLC +GKT+KA    +QL+  +   D  ++KT+I+G+CKEG F+ GYELLV M ++D  P
Sbjct: 449  YLCETGKTKKAEKAFRQLM-RRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXP 507

Query: 929  DAEIYQILINGFLQQNID-FAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 753
            D E Y+ LING L  +    A + L KM  S HRP++  FH +L  ++++ +   ES  L
Sbjct: 508  DFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGR-ASESASL 566

Query: 752  VIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 573
            + +ML++++R N+  ST  V  LF +  ND+AF++V LLY KGY +KMEEL+  LC  RK
Sbjct: 567  IQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRK 626

Query: 572  FLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 393
             ++  ++LLFSLE  + +  D+  TVI +LC   K  EAF L+Y++ E G      SC  
Sbjct: 627  VIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQ-QLSCQN 685

Query: 392  ALKVALENGEKMNEAKFVAKQINR 321
             LKV+L+ G K+ EA+ V K++ R
Sbjct: 686  QLKVSLKAGGKLEEAESVQKRMER 709


>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Solanum lycopersicum]
          Length = 710

 Score =  486 bits (1250), Expect = e-134
 Identities = 281/674 (41%), Positives = 402/674 (59%), Gaps = 13/674 (1%)
 Frame = -2

Query: 2309 SELGHAIADLVNAEATDSWPPSLPASLTALVRSHTHALSPSDLLHSLYLLRRPNAAGHLL 2130
            S+    IA ++N   T+ W   L +SL+++ +    +LS + +LH+L  ++ P+ A +  
Sbjct: 47   SKKARKIATIIN---TNPWSSHLESSLSSITQP---SLSHTTVLHTLRFIKIPSKALYFF 100

Query: 2129 LWSLNLVPLEPAVTGKVIYLLL------RSRXXXXXXXXXXXXXXXXXXXXSFNALLRRL 1968
             W+  +       +  ++  LL       S                      FN L++  
Sbjct: 101  NWTQKMGFQHTHQSYLLMLQLLGSSRSLNSARNFLLSIPRRSNGAVPLQDRYFNTLIQSY 160

Query: 1967 ATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXASDLFEEMLAR-AVRPD 1803
              AG  + ++++F+++ S    PSV ++NSL              +LF+EML     +PD
Sbjct: 161  GKAGLFQESLKVFKVMKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEMLKTFGAKPD 220

Query: 1802 VCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLN 1623
            V TFN LIRGFC+NSMV + F  FKEM RH C P+V+TYNT++DGLCRAG+V IAH +L 
Sbjct: 221  VYTFNILIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLK 280

Query: 1622 GMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCK 1443
            GM +     +PNVVSYTTL+RGYC K           +MI  GL+P +ITYNTL+QGLC+
Sbjct: 281  GMAKRGHQLSPNVVSYTTLVRGYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCE 340

Query: 1442 SRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDL 1263
            ++R D +KE+L+ G  G   L+  PDTCTFNTLI  HCN+G   +A+KVFE M  ++V  
Sbjct: 341  AKRFDRIKEILE-GTLGSGGLI--PDTCTFNTLITYHCNVGNLDEAVKVFENMLYLKVKP 397

Query: 1262 DSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPMLNYLCHSGKT 1086
            DS TY ILIR  C+ G F RAE+L D+L+ KEVL R  GC PL+A YNPM  Y C  GKT
Sbjct: 398  DSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKIGKT 457

Query: 1085 EKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPDAEIYQIL 906
            +KA  V +QL+  +   D  A++ +I G+CKEG F   + LLV M +RD VP+  IY+ L
Sbjct: 458  KKAEKVFRQLM-RRGTQDPFAYELLIRGHCKEGTFNDAHGLLVLMLRRDYVPNIVIYESL 516

Query: 905  INGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLVIVMLERS 729
            I G LQ+N    A++ L KM  S H P +  +H +L  ++KK+    E   LV +ML+  
Sbjct: 517  IEGLLQKNDPKVAYDTLEKMLKSSHLPRSSIYHQILTELIKKN-CASECASLVTLMLDNK 575

Query: 728  VRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKFLEAREML 549
            VR NI+LST  V+ LF++   +RAF+IV+ LYE  Y + ME LV  LC+ RK LEA ++L
Sbjct: 576  VRQNINLSTDTVKILFQTGLRERAFEIVRCLYENEYVVDMEGLVAFLCQRRKLLEACKLL 635

Query: 548  LFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALEN 369
            LFSL K   ++ D  +T+++ LC   +A EAF+++YE+ E+G       C+  L +ALE 
Sbjct: 636  LFSLSKGHILNVDTCSTLLSALCKARRASEAFEIYYELLEKGVQQ-PLECIEELGLALET 694

Query: 368  GEKMNEAKFVAKQI 327
              ++ EA+FV K+I
Sbjct: 695  EGRIKEAEFVKKRI 708


>ref|XP_006648252.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Oryza brachyantha]
          Length = 590

 Score =  485 bits (1248), Expect = e-134
 Identities = 267/571 (46%), Positives = 364/571 (63%), Gaps = 17/571 (2%)
 Frame = -2

Query: 1979 LRRLATAGHLRYAVRLFRLIPSP-SVFSYNSLLXXXXXXXXXXXASDLFEEML-ARAVRP 1806
            L  L  +  L  A+   R +PSP ++   ++L            AS LF   L + +  P
Sbjct: 21   LHLLLRSRDLHPALAYLRALPSPLTLLPNHALNALLRALAAARAASALFAAFLRSPSASP 80

Query: 1805 DVCTFNTLIRGFCLNS------MVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVR 1644
            D  T NTL+ G    S       +   FH   E   +  APD ++YN+LL  LCRAG++ 
Sbjct: 81   DAATLNTLLHGLSTASPQPSPPALLRLFHFLPET--YAFAPDAISYNSLLSALCRAGDLV 138

Query: 1643 IAHKLLNGMR---RNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNIT 1473
             A KL +GMR       D  PNV++YTT+I+ YC K            M++ G++PN IT
Sbjct: 139  TARKLFDGMRVGEEGRGDVFPNVITYTTMIKAYCGKRLVSEALAIFKIMVADGVEPNRIT 198

Query: 1472 YNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVF 1293
            YNT++QG C + RM+LVKE+LD          F+PDTCTFN L+AAHC  G   DA+KVF
Sbjct: 199  YNTMVQGFCDAGRMELVKEVLDMDS-------FKPDTCTFNILVAAHCREGRIEDAMKVF 251

Query: 1292 EKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPM 1116
             +M E++V  DS +Y ++IR LCEN EF +AEEL+DELL KEVL++RGGC PL+A YNP+
Sbjct: 252  NQMVELRVRRDSASYSMVIRALCENEEFAQAEELVDELLEKEVLKKRGGCTPLIAAYNPV 311

Query: 1115 LNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDL 936
              YLC  GKT+KAR++   LLD ++K D+ AFKT+ILG+C+EG F++GYEL++SM KRDL
Sbjct: 312  FVYLCEHGKTKKARMLFGLLLDRRSKVDVPAFKTLILGHCREGDFEQGYELVLSMLKRDL 371

Query: 935  VPDAEIYQILINGFLQQN-IDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESG 759
            VPD E Y  +I+GF Q+  + FAWE L +M NS  RPST  FH VL+G++ K    KE+ 
Sbjct: 372  VPDNECYIGVIDGFSQKGRMKFAWEALHRMLNSGLRPSTSTFHSVLLGLLNKDGCAKEAA 431

Query: 758  DLVIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKS 579
            DL+ +MLER +R N+DLST +++ LFR+  NDRA+KIV  LY+ GY +KME+L+ SLCK 
Sbjct: 432  DLIEIMLERKIRQNVDLSTNLIDTLFRNCLNDRAYKIVTSLYDHGYYIKMEKLIASLCKE 491

Query: 578  RKFLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSC 399
            +KF+EA ++ LFS +K + +     + V++ LC  G+A EAF LFYE+ E   +S +S+ 
Sbjct: 492  KKFMEAADLTLFSFKKCQNLGVAFPSMVMDGLCITGRASEAFWLFYELIENRSSSSSSAA 551

Query: 398  ----LCALKVALENGEKMNEAKFVAKQINRA 318
                L AL  ALE   KM EA FVAKQ+ RA
Sbjct: 552  APRSLVALHHALEESGKMKEADFVAKQMRRA 582


>gb|EOX96382.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 724

 Score =  482 bits (1241), Expect = e-133
 Identities = 287/656 (43%), Positives = 393/656 (59%), Gaps = 13/656 (1%)
 Frame = -2

Query: 2255 WPPSLPASLTALVRSHTHALSPSDLLHSLYLLRRPNAAGHLLLWSLNL-VPLEPAVTGKV 2079
            W   L +SL++L  S    LS + +L +L L++ P+ A     W   +  P        +
Sbjct: 73   WSSELESSLSSLSPS----LSKTTVLQTLRLIKAPSKALQFFDWVQKMGFPHNAQSFFLI 128

Query: 2078 IYLL-----LRSRXXXXXXXXXXXXXXXXXXXXSFNALLRRLATAGHLRYAVRLFRLIP- 1917
            + +L     L +                      FN+L+R    AG  + ++++F  +  
Sbjct: 129  LEILGKERNLNAARNLLLSIEKRSNGSVKLEDQFFNSLIRSYGKAGLFQESIKVFETMKG 188

Query: 1916 ---SPSVFSYNSLLXXXXXXXXXXXASDLFEEMLAR-AVRPDVCTFNTLIRGFCLNSMVH 1749
               SPSV S+N+LL           A  +F+EML+   V PDV TFN LIRGFC+NSMV 
Sbjct: 189  IGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEMLSTYGVSPDVYTFNILIRGFCMNSMVD 248

Query: 1748 EAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEVRIAHKLLNGMRRNTPDTAPNVVSYTT 1569
            E F  FKEM R  C PDVVTYNT++DGLCRAG+V IA  ++ GM + + D  PNVV+YTT
Sbjct: 249  EGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKKSLDLNPNVVTYTT 308

Query: 1568 LIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYNTLIQGLCKSRRMDLVKELLDRGKNGD 1389
            L+RGYC K           +MIS  L+PN ITYNTLI+GL +    + +KE+L+      
Sbjct: 309  LVRGYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILE---GMG 365

Query: 1388 EDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEKMTEMQVDLDSVTYGILIRGLCENGEF 1209
            ED  F PDTCT NTLI AHCN     +AL VF++M+E+ V  DS TY ++IR LC+ G+F
Sbjct: 366  EDGRFVPDTCTLNTLINAHCNAENMDEALNVFKRMSELNVLPDSATYSVIIRSLCQRGDF 425

Query: 1208 GRAEELIDELL-KEVLRRRGGCLPLVATYNPMLNYLCHSGKTEKARIVLQQLLDNKAKFD 1032
             +AEE  DEL  KE+L    GC PLVA YNPM  YLC +GKT+KA IV +QL+  + + D
Sbjct: 426  EKAEEFFDELAEKEILLSDVGCTPLVAAYNPMFEYLCGNGKTKKAEIVFRQLM-KRGRQD 484

Query: 1031 LEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVPDAEIYQILINGFLQQNID-FAWEVLR 855
              A+KT+ILG+C+EG FK GYELLV M +RD  P  EIY  LI G LQ+     A   L 
Sbjct: 485  PPAYKTLILGHCREGTFKDGYELLVLMLRRDFEPGFEIYDSLICGLLQKGEPLLAHLTLE 544

Query: 854  KMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDLVIVMLERSVRPNIDLSTKVVENLFRS 675
            KM  S H P T + H +L  ++KKS   +E+  LV +ML+  +R N++LST+  + LF  
Sbjct: 545  KMLKSSHLPQTSSVHSILAELLKKS-CAQEAASLVTLMLDTRIRQNVNLSTQTAKLLFAR 603

Query: 674  DSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRKFLEAREMLLFSLEKSEKISNDVYATV 495
               D+AF+I+ LLY+ GY ++MEELV  LC+S K LEA +ML FSLEK + +  ++ + V
Sbjct: 604  RLQDKAFQIIGLLYDNGYVVEMEELVGFLCQSGKLLEACKMLQFSLEKHKSVDIEMCSMV 663

Query: 494  INKLCSKGKALEAFDLFYEIKERGCASINSSCLCALKVALENGEKMNEAKFVAKQI 327
            I  LC+  +  EAF L+YE+ ERG       CL  LK+ALE G +++EA+FV+K++
Sbjct: 664  IEGLCNSKRLSEAFGLYYELVERG-KHQQLRCLENLKIALEAGGRLDEAEFVSKRM 718


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  481 bits (1238), Expect = e-133
 Identities = 270/562 (48%), Positives = 357/562 (63%), Gaps = 7/562 (1%)
 Frame = -2

Query: 1991 FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXASDLFEEML 1824
            FN+L+R    AG  + +V++F  + S    PSV ++NSLL           A  +F+EML
Sbjct: 159  FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218

Query: 1823 AR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 1647
            +   V PD  TFN LIRGFC NSMV E F  FKEMSR  C PD+VTYNTL+DGLCRAG+V
Sbjct: 219  STYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKV 278

Query: 1646 RIAHKLLNGMRRNTPDTAPNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPNNITYN 1467
             IAH ++NGM + + +  P+VV+YTTL+RGYC K           +M+S GL+PN ITYN
Sbjct: 279  NIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYN 338

Query: 1466 TLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDALKVFEK 1287
            TLI+GLC+ +++D +K++ +    G     F PDTCT NTL+ AHCN G  +DAL+VFEK
Sbjct: 339  TLIKGLCEVQKIDKIKQIFEGALGGGG---FIPDTCTLNTLMNAHCNAGNLNDALEVFEK 395

Query: 1286 MTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELL-KEVLRRRGGCLPLVATYNPMLN 1110
            M  + V  DS TY +LIR LC+ G F RAE+L DEL  KE+L R  GC PLVA Y  M  
Sbjct: 396  MMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFE 455

Query: 1109 YLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSKRDLVP 930
            +LC +GKT KA  V +QL+  +   D  +FK +I G+C+EG F+ GYELLV M +RD VP
Sbjct: 456  FLCRNGKTAKAERVFRQLM-KRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVP 514

Query: 929  DAEIYQILINGFLQQNIDF-AWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTKESGDL 753
            D E YQ LI+G LQ+     A++ L KM  S H P T  FH +L  ++ K     ES   
Sbjct: 515  DLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKG-CAHESARF 573

Query: 752  VIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSLCKSRK 573
            +++MLE  +R NI+LST  V  LF S   D+AFKIV LLY  GY + MEEL+  L  +RK
Sbjct: 574  IMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEELIGFLSHNRK 633

Query: 572  FLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASINSSCLC 393
            FL A ++LLF LEK + +  D+  TVI  LC   +  EAF L+YE+ E+G  +    CL 
Sbjct: 634  FLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYELVEKG-NNQPLRCLE 692

Query: 392  ALKVALENGEKMNEAKFVAKQI 327
             L+VALE   ++ E KF++K++
Sbjct: 693  NLRVALEARGRLEEVKFLSKRM 714


>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1128

 Score =  476 bits (1224), Expect = e-131
 Identities = 290/695 (41%), Positives = 410/695 (58%), Gaps = 20/695 (2%)
 Frame = -2

Query: 2333 SSAGGLEYSELGHAIADLVNAEATDSWPPSLPASLTALVRSHTHALSPSDLLHSLYLLRR 2154
            SS+   + S+   A+A L+N+     W P L +SL++L  S    +S + +  +L  ++ 
Sbjct: 40   SSSSKSQCSKTAQAMASLINSTP---WSPHLQSSLSSLSPS----ISTTTVSQTLRRIKT 92

Query: 2153 PNAAGHLLLWSLNLVPLEPAVTG-KVIYLLLRSRXXXXXXXXXXXXXXXXXXXXS----- 1992
            P+ A     W  +L     + +   ++ LL R+R                          
Sbjct: 93   PSQAIKFFNWVESLGFSHTSHSYFTILELLGRNRNLNAARNFLFSIEKRSNGKVKLEDKF 152

Query: 1991 FNALLRRLATAGHLRYAVRLFRLIPS----PSVFSYNSLLXXXXXXXXXXXASDLFEEML 1824
            FN+L+R    AG  + AV +F+ + S     SVFS+NSL              ++++EML
Sbjct: 153  FNSLIRSYGAAGLFQEAVNVFKTMKSMGISASVFSFNSLFSVLLKRGRTSMVRNVYDEML 212

Query: 1823 AR-AVRPDVCTFNTLIRGFCLNSMVHEAFHVFKEMSRHGCAPDVVTYNTLLDGLCRAGEV 1647
                V PD  TFN LIRGFC++SMV E F  FKEM R  C PDVVTYNTL+DGLCR G+V
Sbjct: 213  GMYGVEPDTHTFNILIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKV 272

Query: 1646 RIAHKLLNGMRRNTPDTA-----PNVVSYTTLIRGYCSKXXXXXXXXXXXDMISVGLQPN 1482
             IA  ++ GM   + +       PNVV+YTTLIRGYC +           +M S G++PN
Sbjct: 273  EIARNVVKGMMSKSSEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEMTSQGMKPN 332

Query: 1481 NITYNTLIQGLCKSRRMDLVKELLDRGKNGDEDLVFEPDTCTFNTLIAAHCNMGCFSDAL 1302
             ITYNTL +GLC+++R+D +KE+L+    G+    F PDTCTFNTL+ +HC  G   +AL
Sbjct: 333  EITYNTLFKGLCEAKRLDKIKEILEGAMRGEG---FTPDTCTFNTLMHSHCIAGNLEEAL 389

Query: 1301 KVFEKMTEMQVDLDSVTYGILIRGLCENGEFGRAEELIDELLK-EVLRRRGGCLPLVATY 1125
            KVF  M+E++V  DS TY +LIR  CE  ++ +AEEL DEL K ++L    GC P+VA+Y
Sbjct: 390  KVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQILLSDCGCTPIVASY 449

Query: 1124 NPMLNYLCHSGKTEKARIVLQQLLDNKAKFDLEAFKTVILGYCKEGKFKKGYELLVSMSK 945
             P+  YLC +G+T+KA  V +QLL    + D  +FKT+I+G+C+EG ++ GY+L+V M +
Sbjct: 450  KPIFEYLCSNGRTKKADEVFRQLLKRGTQ-DPPSFKTLIMGHCREGTYEAGYKLVVLMLR 508

Query: 944  RDLVPDAEIYQILINGFLQQ-NIDFAWEVLRKMFNSKHRPSTDAFHLVLMGMVKKSKYTK 768
            RD VPD +IY  LI+GFL++ N   A + L KM  S H P T  FH +L  +++K    +
Sbjct: 509  RDYVPDVKIYDSLIDGFLEKGNPLLAQQTLEKMLKSSHLPRTSTFHSILAALLEKH-CAR 567

Query: 767  ESGDLVIVMLERSVRPNIDLSTKVVENLFRSDSNDRAFKIVKLLYEKGYRLKMEELVVSL 588
            ES  L  +MLE++ RPNIDLST +++ LF     ++AFKIV LL++ GY +K+EELV  L
Sbjct: 568  ESASLFSLMLEKNFRPNIDLSTDLLKLLFSEGLQEKAFKIVGLLHDGGYSIKLEELVKFL 627

Query: 587  CKSRKFLEAREMLLFSLEKSEKISNDVYATVINKLCSKGKALEAFDLFYEIKERGCASIN 408
            C+SRK LEA E+L FSL K E +S D+   VI  LC   K  EAF L+YE+ E G     
Sbjct: 628  CQSRKLLEACELLQFSLRKQENVSIDILDQVILGLCEINKLREAFGLYYELIENGDHG-Q 686

Query: 407  SSCLCALKVALENGEKMNEAKFVAKQ--INRAVDE 309
              CL  LK +LE   +  EA FV+K+  I++ VD+
Sbjct: 687  LPCLHHLKSSLEVAGRSVEADFVSKRMPIHQLVDK 721