BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00012212
         (592 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006663947.1| PREDICTED: probable E3 ubiquitin-protein lig...    64   2e-08
ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein lig...    63   7e-08
gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indi...    63   7e-08
ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group] g...    62   1e-07
ref|XP_004962592.1| PREDICTED: ultraviolet-B receptor UVR8-like ...    60   4e-07
ref|XP_006647457.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    56   8e-06
dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   8e-06
gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japo...    56   8e-06
gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indi...    56   8e-06
ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea ma...    56   8e-06

>ref|XP_006663947.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           X1 [Oryza brachyantha] gi|573963628|ref|XP_006663948.1|
           PREDICTED: probable E3 ubiquitin-protein ligase
           HERC1-like isoform X2 [Oryza brachyantha]
           gi|573963630|ref|XP_006663949.1| PREDICTED: probable E3
           ubiquitin-protein ligase HERC1-like isoform X3 [Oryza
           brachyantha]
          Length = 534

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/43 (69%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
 Frame = +2

Query: 467 MDAT-ASGSSSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFGD 592
           MDAT +SG+SSS+  H I+D +L+LVSPLQQ+FQR+QRHCFGD
Sbjct: 1   MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFGD 43


>ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 31/43 (72%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
 Frame = +2

Query: 467 MDAT-ASGSSSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFGD 592
           MDAT +SG+SSS+    IVD +LSLVSPLQQ+FQR+QRHCFGD
Sbjct: 1   MDATTSSGASSSLPLRLIVDDTLSLVSPLQQSFQRSQRHCFGD 43


>gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
          Length = 534

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 29/43 (67%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
 Frame = +2

Query: 467 MDAT-ASGSSSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFGD 592
           MDAT +SG+SSS+  H I+D +L+ VSPLQQ+FQR+QRHCFGD
Sbjct: 1   MDATTSSGASSSLPLHLIIDDALAFVSPLQQSFQRSQRHCFGD 43


>ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
           gi|77554669|gb|ABA97465.1| regulator of chromosome
           condensation, putative, expressed [Oryza sativa Japonica
           Group] gi|77554670|gb|ABA97466.1| regulator of
           chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group] gi|108862484|gb|ABA97467.2|
           regulator of chromosome condensation, putative,
           expressed [Oryza sativa Japonica Group]
           gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa
           Japonica Group] gi|215694343|dbj|BAG89336.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215694576|dbj|BAG89767.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215704369|dbj|BAG93803.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222616915|gb|EEE53047.1| hypothetical protein
           OsJ_35777 [Oryza sativa Japonica Group]
          Length = 534

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 29/42 (69%), Positives = 37/42 (88%), Gaps = 1/42 (2%)
 Frame = +2

Query: 467 MDAT-ASGSSSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFG 589
           MDAT +SG+SSS+  H I+D +L+LVSPLQQ+FQR+QRHCFG
Sbjct: 1   MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFG 42


>ref|XP_004962592.1| PREDICTED: ultraviolet-B receptor UVR8-like [Setaria italica]
          Length = 534

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/43 (69%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = +2

Query: 467 MDATAS-GSSSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFGD 592
           MDAT S G+SSS+  H IVD +L+LVSPLQQ+FQR+QR CFGD
Sbjct: 1   MDATTSRGASSSLPLHLIVDDTLALVSPLQQSFQRSQRLCFGD 43


>ref|XP_006647457.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryza
           brachyantha]
          Length = 537

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +2

Query: 458 QCPMDATASGSSSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFG 589
           QCPMDA ASG+S  + FH IVD   S  SPL    +R+QRHC+G
Sbjct: 2   QCPMDAAASGTSPVMQFHGIVDEPTSHSSPLHAVLERSQRHCYG 45


>dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 28/43 (65%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
 Frame = +2

Query: 467 MDATASGS-SSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFGD 592
           MDAT S    SS+  H IVD ++S+VSPLQQ FQRAQ HCFGD
Sbjct: 1   MDATMSSEVRSSLPRHLIVDDTISVVSPLQQPFQRAQHHCFGD 43


>gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
          Length = 609

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +2

Query: 449 RIRQCPMDATASGSSSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFG 589
           R  QCPMDA ASG+S  + FH IVD   S  SPL    +R+QRHC+G
Sbjct: 71  RSMQCPMDAAASGTSPVMQFHGIVDEPPSHSSPLHTALERSQRHCYG 117


>gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
          Length = 634

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = +2

Query: 449 RIRQCPMDATASGSSSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFG 589
           R  QCPMDA ASG+S  + FH IVD   S  SPL    +R+QRHC+G
Sbjct: 96  RSMQCPMDAAASGTSPVMQFHGIVDEPPSHSSPLHTALERSQRHCYG 142


>ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
           gi|194702102|gb|ACF85135.1| unknown [Zea mays]
           gi|194704788|gb|ACF86478.1| unknown [Zea mays]
           gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like
           domain-containing protein 2 [Zea mays]
           gi|219884475|gb|ACL52612.1| unknown [Zea mays]
           gi|223949899|gb|ACN29033.1| unknown [Zea mays]
           gi|224030775|gb|ACN34463.1| unknown [Zea mays]
           gi|413922916|gb|AFW62848.1| putative regulator of
           chromosome condensation (RCC1) family protein isoform 1
           [Zea mays] gi|413922917|gb|AFW62849.1| putative
           regulator of chromosome condensation (RCC1) family
           protein isoform 2 [Zea mays] gi|413922918|gb|AFW62850.1|
           putative regulator of chromosome condensation (RCC1)
           family protein isoform 3 [Zea mays]
          Length = 535

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = +2

Query: 458 QCPMDATASGSSSSITFHTIVDSSLSLVSPLQQTFQRAQRHCFGD 592
           QCPMD  ASG+S  + FH+  D S++  SPL    QR+QRHC+GD
Sbjct: 2   QCPMDTAASGTSPVMQFHSNADESIAHSSPLATLIQRSQRHCYGD 46