BLASTX nr result
ID: Zingiber25_contig00012211
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00012211
(483 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein lig... 120 1e-25
ref|XP_006663947.1| PREDICTED: probable E3 ubiquitin-protein lig... 118 7e-25
gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indi... 117 2e-24
ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group] g... 115 5e-24
ref|XP_004962592.1| PREDICTED: ultraviolet-B receptor UVR8-like ... 115 6e-24
dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare] 107 2e-21
ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea ma... 100 2e-19
ref|XP_006852257.1| hypothetical protein AMTR_s00049p00167370 [A... 100 3e-19
ref|XP_006591478.1| PREDICTED: probable E3 ubiquitin-protein lig... 99 4e-19
ref|XP_003551939.1| PREDICTED: ultraviolet-B receptor UVR8-like ... 99 8e-19
gb|EOY00751.1| Regulator of chromosome condensation (RCC1) famil... 98 1e-18
ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [S... 98 1e-18
ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig... 98 1e-18
emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera] 98 1e-18
ref|XP_006647457.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 97 2e-18
gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japo... 97 2e-18
gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indi... 97 2e-18
ref|XP_006438172.1| hypothetical protein CICLE_v10031198mg [Citr... 97 3e-18
gb|ESW31619.1| hypothetical protein PHAVU_002G253200g [Phaseolus... 96 4e-18
ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group] g... 96 4e-18
>ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 534
Score = 120 bits (302), Expect = 1e-25
Identities = 58/77 (75%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 MDAT-ASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVLH 431
MDAT +SG SSS+P R +VD +L LV PLQQ+FQR QRHCFGDS+PGEFPLAANPSIVLH
Sbjct: 1 MDATTSSGASSSLPLRLIVDDTLSLVSPLQQSFQRSQRHCFGDSSPGEFPLAANPSIVLH 60
Query: 432 VLTACNLNPQDLANLEA 482
VLT+CN+ P+DLA+LEA
Sbjct: 61 VLTSCNVEPEDLAHLEA 77
>ref|XP_006663947.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
X1 [Oryza brachyantha] gi|573963628|ref|XP_006663948.1|
PREDICTED: probable E3 ubiquitin-protein ligase
HERC1-like isoform X2 [Oryza brachyantha]
gi|573963630|ref|XP_006663949.1| PREDICTED: probable E3
ubiquitin-protein ligase HERC1-like isoform X3 [Oryza
brachyantha]
Length = 534
Score = 118 bits (296), Expect = 7e-25
Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 MDAT-ASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVLH 431
MDAT +SG SSS+P ++D +L LV PLQQ+FQR QRHCFGDS PGEFPLAANPSIVLH
Sbjct: 1 MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFGDSAPGEFPLAANPSIVLH 60
Query: 432 VLTACNLNPQDLANLEA 482
VLT+CNL P DLA+LEA
Sbjct: 61 VLTSCNLEPDDLAHLEA 77
>gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
Length = 534
Score = 117 bits (292), Expect = 2e-24
Identities = 56/77 (72%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 MDAT-ASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVLH 431
MDAT +SG SSS+P ++D +L V PLQQ+FQR QRHCFGDS PGEFPLAANPSIVLH
Sbjct: 1 MDATTSSGASSSLPLHLIIDDALAFVSPLQQSFQRSQRHCFGDSAPGEFPLAANPSIVLH 60
Query: 432 VLTACNLNPQDLANLEA 482
VLT+CNL P DLA+LEA
Sbjct: 61 VLTSCNLEPDDLAHLEA 77
>ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
gi|77554669|gb|ABA97465.1| regulator of chromosome
condensation, putative, expressed [Oryza sativa Japonica
Group] gi|77554670|gb|ABA97466.1| regulator of
chromosome condensation, putative, expressed [Oryza
sativa Japonica Group] gi|108862484|gb|ABA97467.2|
regulator of chromosome condensation, putative,
expressed [Oryza sativa Japonica Group]
gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa
Japonica Group] gi|215694343|dbj|BAG89336.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215694576|dbj|BAG89767.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215704369|dbj|BAG93803.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222616915|gb|EEE53047.1| hypothetical protein
OsJ_35777 [Oryza sativa Japonica Group]
Length = 534
Score = 115 bits (289), Expect = 5e-24
Identities = 56/77 (72%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 MDAT-ASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVLH 431
MDAT +SG SSS+P ++D +L LV PLQQ+FQR QRHCFG S PGEFPLAANPSIVLH
Sbjct: 1 MDATTSSGASSSLPLHLIIDDALALVSPLQQSFQRSQRHCFGGSAPGEFPLAANPSIVLH 60
Query: 432 VLTACNLNPQDLANLEA 482
VLT+CNL P DLA+LEA
Sbjct: 61 VLTSCNLEPDDLAHLEA 77
>ref|XP_004962592.1| PREDICTED: ultraviolet-B receptor UVR8-like [Setaria italica]
Length = 534
Score = 115 bits (288), Expect = 6e-24
Identities = 57/77 (74%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 MDATAS-GGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVLH 431
MDAT S G SSS+P +VD +L LV PLQQ+FQR QR CFGDS PGEFPLAANPSIVLH
Sbjct: 1 MDATTSRGASSSLPLHLIVDDTLALVSPLQQSFQRSQRLCFGDSAPGEFPLAANPSIVLH 60
Query: 432 VLTACNLNPQDLANLEA 482
VLT+CNL+P+DLA+LEA
Sbjct: 61 VLTSCNLDPEDLAHLEA 77
>dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 534
Score = 107 bits (267), Expect = 2e-21
Identities = 53/77 (68%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 MDATASGG-SSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVLH 431
MDAT S SS+P +VD ++ +V PLQQ FQR Q HCFGDS PGEFPLAANPSIVLH
Sbjct: 1 MDATMSSEVRSSLPRHLIVDDTISVVSPLQQPFQRAQHHCFGDSAPGEFPLAANPSIVLH 60
Query: 432 VLTACNLNPQDLANLEA 482
VLT+CNL P+DLA+LEA
Sbjct: 61 VLTSCNLYPEDLAHLEA 77
>ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
gi|194702102|gb|ACF85135.1| unknown [Zea mays]
gi|194704788|gb|ACF86478.1| unknown [Zea mays]
gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like
domain-containing protein 2 [Zea mays]
gi|219884475|gb|ACL52612.1| unknown [Zea mays]
gi|223949899|gb|ACN29033.1| unknown [Zea mays]
gi|224030775|gb|ACN34463.1| unknown [Zea mays]
gi|413922916|gb|AFW62848.1| putative regulator of
chromosome condensation (RCC1) family protein isoform 1
[Zea mays] gi|413922917|gb|AFW62849.1| putative
regulator of chromosome condensation (RCC1) family
protein isoform 2 [Zea mays] gi|413922918|gb|AFW62850.1|
putative regulator of chromosome condensation (RCC1)
family protein isoform 3 [Zea mays]
Length = 535
Score = 100 bits (250), Expect = 2e-19
Identities = 47/79 (59%), Positives = 57/79 (72%)
Frame = +3
Query: 246 QCPMDATASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIV 425
QCPMD ASG S + F + D S+ PL QR QRHC+GD +PGEFPLA +PSIV
Sbjct: 2 QCPMDTAASGTSPVMQFHSNADESIAHSSPLATLIQRSQRHCYGDGSPGEFPLAVSPSIV 61
Query: 426 LHVLTACNLNPQDLANLEA 482
LHVL++C+L P+DLANLEA
Sbjct: 62 LHVLSSCDLGPKDLANLEA 80
>ref|XP_006852257.1| hypothetical protein AMTR_s00049p00167370 [Amborella trichopoda]
gi|548855861|gb|ERN13724.1| hypothetical protein
AMTR_s00049p00167370 [Amborella trichopoda]
Length = 536
Score = 100 bits (248), Expect = 3e-19
Identities = 53/79 (67%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
Frame = +3
Query: 255 MDATASGGSSSIP---FRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIV 425
MDAT SG S P + + D L LV LQ FQR QRHC+GDSTPGEFPL+ANPSIV
Sbjct: 1 MDATTSGTFSQTPTIQYHGIPDQPLALVSQLQ-IFQRQQRHCYGDSTPGEFPLSANPSIV 59
Query: 426 LHVLTACNLNPQDLANLEA 482
LHVLT CNL+PQDLA LEA
Sbjct: 60 LHVLTDCNLDPQDLAKLEA 78
>ref|XP_006591478.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
X2 [Glycine max] gi|571490401|ref|XP_003538581.2|
PREDICTED: probable E3 ubiquitin-protein ligase
HERC1-like isoform X1 [Glycine max]
Length = 531
Score = 99.4 bits (246), Expect = 4e-19
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 MDATASGGSSSIPFRTVVDSSLPLV--PPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVL 428
MDAT SG + +I + + D + + PL TFQR QRHCFGDSTPGEFPL+ANPSIVL
Sbjct: 2 MDATTSG-TPTIQYHNIPDQPITAIIATPLP-TFQRQQRHCFGDSTPGEFPLSANPSIVL 59
Query: 429 HVLTACNLNPQDLANLEA 482
HVLTACNL+PQDLA LEA
Sbjct: 60 HVLTACNLDPQDLAKLEA 77
>ref|XP_003551939.1| PREDICTED: ultraviolet-B receptor UVR8-like isoform X1 [Glycine
max] gi|571542196|ref|XP_006601920.1| PREDICTED:
ultraviolet-B receptor UVR8-like isoform X2 [Glycine
max] gi|571542200|ref|XP_006601921.1| PREDICTED:
ultraviolet-B receptor UVR8-like isoform X3 [Glycine
max]
Length = 535
Score = 98.6 bits (244), Expect = 8e-19
Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 MDATASGGSSSIPFRTVVDSSLPLV--PPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVL 428
MDAT SG + ++ + + D + + PL TFQR QRHCFGDSTPGEFPL+ANPSIVL
Sbjct: 1 MDATTSG-TPTVQYHNIPDQPITAIIATPLP-TFQRQQRHCFGDSTPGEFPLSANPSIVL 58
Query: 429 HVLTACNLNPQDLANLEA 482
HVLTACNL PQDLA LEA
Sbjct: 59 HVLTACNLEPQDLAKLEA 76
>gb|EOY00751.1| Regulator of chromosome condensation (RCC1) family protein isoform
1 [Theobroma cacao]
Length = 534
Score = 97.8 bits (242), Expect = 1e-18
Identities = 51/77 (66%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 MDATASGGSSSIPFRTVVDSSLP-LVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVLH 431
MDAT SG + +I + + D + +V TFQR RHCFGDSTPGEFPLAANPSIVLH
Sbjct: 1 MDATTSG-TPTIQYHNIPDQPITAIVAAPVPTFQRQVRHCFGDSTPGEFPLAANPSIVLH 59
Query: 432 VLTACNLNPQDLANLEA 482
VLTACNL+PQDLA LEA
Sbjct: 60 VLTACNLDPQDLAKLEA 76
>ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
gi|241933956|gb|EES07101.1| hypothetical protein
SORBIDRAFT_04g024990 [Sorghum bicolor]
Length = 535
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = +3
Query: 246 QCPMDATASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIV 425
QCPMD ASG S + F + D S PL +R QRHC GD PGEFPLA +PSIV
Sbjct: 2 QCPMDTAASGTSPVLQFHSNADESTSHSSPLPTLIERSQRHCCGDGIPGEFPLAVSPSIV 61
Query: 426 LHVLTACNLNPQDLANLEA 482
LHVL+AC+L+P+DLANLEA
Sbjct: 62 LHVLSACDLDPKDLANLEA 80
>ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
[Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed
protein product [Vitis vinifera]
Length = 534
Score = 97.8 bits (242), Expect = 1e-18
Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 MDATASGGSSSIPFRTVVDSSLPLV--PPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVL 428
MDAT SG + ++ + + D + + PL TFQR QRHCFGDS+PGEFPLAANPSIVL
Sbjct: 1 MDATRSG-TPTVQYHNIPDQPIAAIVTSPLP-TFQRQQRHCFGDSSPGEFPLAANPSIVL 58
Query: 429 HVLTACNLNPQDLANLEA 482
HVLTACNL PQDLA LEA
Sbjct: 59 HVLTACNLEPQDLAKLEA 76
>emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
Length = 541
Score = 97.8 bits (242), Expect = 1e-18
Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 MDATASGGSSSIPFRTVVDSSLPLV--PPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVL 428
MDAT SG + ++ + + D + + PL TFQR QRHCFGDS+PGEFPLAANPSIVL
Sbjct: 1 MDATRSG-TPTVQYHNIPDQPIAAIVTSPLP-TFQRQQRHCFGDSSPGEFPLAANPSIVL 58
Query: 429 HVLTACNLNPQDLANLEA 482
HVLTACNL PQDLA LEA
Sbjct: 59 HVLTACNLEPQDLAKLEA 76
>ref|XP_006647457.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryza
brachyantha]
Length = 537
Score = 97.1 bits (240), Expect = 2e-18
Identities = 46/79 (58%), Positives = 54/79 (68%)
Frame = +3
Query: 246 QCPMDATASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIV 425
QCPMDA ASG S + F +VD PL +R QRHC+G TPGEFPLA +PSIV
Sbjct: 2 QCPMDAAASGTSPVMQFHGIVDEPTSHSSPLHAVLERSQRHCYGHETPGEFPLAVSPSIV 61
Query: 426 LHVLTACNLNPQDLANLEA 482
LHVL+ C L+P+DLA LEA
Sbjct: 62 LHVLSTCELDPKDLAALEA 80
>gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
Length = 609
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/82 (57%), Positives = 55/82 (67%)
Frame = +3
Query: 237 RIRQCPMDATASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANP 416
R QCPMDA ASG S + F +VD PL +R QRHC+G TPGEFPLA +P
Sbjct: 71 RSMQCPMDAAASGTSPVMQFHGIVDEPPSHSSPLHTALERSQRHCYGHETPGEFPLAVSP 130
Query: 417 SIVLHVLTACNLNPQDLANLEA 482
SIVLHVL+ C L+P+DLA LEA
Sbjct: 131 SIVLHVLSTCELDPKDLAALEA 152
>gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
Length = 634
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/82 (57%), Positives = 55/82 (67%)
Frame = +3
Query: 237 RIRQCPMDATASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANP 416
R QCPMDA ASG S + F +VD PL +R QRHC+G TPGEFPLA +P
Sbjct: 96 RSMQCPMDAAASGTSPVMQFHGIVDEPPSHSSPLHTALERSQRHCYGHETPGEFPLAVSP 155
Query: 417 SIVLHVLTACNLNPQDLANLEA 482
SIVLHVL+ C L+P+DLA LEA
Sbjct: 156 SIVLHVLSTCELDPKDLAALEA 177
>ref|XP_006438172.1| hypothetical protein CICLE_v10031198mg [Citrus clementina]
gi|568861010|ref|XP_006484001.1| PREDICTED: probable E3
ubiquitin-protein ligase HERC1-like isoform X1 [Citrus
sinensis] gi|568861012|ref|XP_006484002.1| PREDICTED:
probable E3 ubiquitin-protein ligase HERC1-like isoform
X2 [Citrus sinensis] gi|557540368|gb|ESR51412.1|
hypothetical protein CICLE_v10031198mg [Citrus
clementina]
Length = 534
Score = 96.7 bits (239), Expect = 3e-18
Identities = 51/78 (65%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 MDATASGGSSSIPFRTVVDSSLP--LVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIVL 428
MDAT SG + +I + + D + +V P+ TFQR QRHCFG+STPGEFPLAA+PSIVL
Sbjct: 1 MDATTSG-TPAIQYHNIPDQPITAIIVAPVP-TFQRNQRHCFGESTPGEFPLAASPSIVL 58
Query: 429 HVLTACNLNPQDLANLEA 482
HVLTACNL+PQDLA LEA
Sbjct: 59 HVLTACNLDPQDLAKLEA 76
>gb|ESW31619.1| hypothetical protein PHAVU_002G253200g [Phaseolus vulgaris]
Length = 534
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Frame = +3
Query: 255 MDATASGGSSSIPFRTVVDSSLPLVPPLQ-QTFQRMQRHCFGDSTPGEFPLAANPSIVLH 431
MDAT SG + +I + + D + + Q TFQR QRHCFGDS+PGEFPL+ANPSIVLH
Sbjct: 1 MDATTSG-TPTIQYHNIPDQPITTIVATQLPTFQRHQRHCFGDSSPGEFPLSANPSIVLH 59
Query: 432 VLTACNLNPQDLANLEA 482
VLT+CNL PQDLA LEA
Sbjct: 60 VLTSCNLYPQDLAKLEA 76
>ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza
sativa Japonica Group] gi|113536855|dbj|BAF09238.1|
Os02g0597000 [Oryza sativa Japonica Group]
gi|215717087|dbj|BAG95450.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 537
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/79 (58%), Positives = 54/79 (68%)
Frame = +3
Query: 246 QCPMDATASGGSSSIPFRTVVDSSLPLVPPLQQTFQRMQRHCFGDSTPGEFPLAANPSIV 425
QCPMDA ASG S + F +VD PL +R QRHC+G TPGEFPLA +PSIV
Sbjct: 2 QCPMDAAASGTSPVMQFHGIVDEPPSHSSPLHTALERSQRHCYGHETPGEFPLAVSPSIV 61
Query: 426 LHVLTACNLNPQDLANLEA 482
LHVL+ C L+P+DLA LEA
Sbjct: 62 LHVLSTCELDPKDLAALEA 80