BLASTX nr result
ID: Zingiber25_contig00012180
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00012180
(498 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522602.1| ring finger protein, putative [Ricinus commu... 77 3e-12
ref|XP_002310500.2| hypothetical protein POPTR_0007s03610g, part... 74 2e-11
ref|XP_004979696.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 71 1e-10
ref|XP_004155494.1| PREDICTED: RING-H2 finger protein ATL54-like... 69 5e-10
ref|XP_004137067.1| PREDICTED: RING-H2 finger protein ATL54-like... 69 5e-10
ref|XP_006412342.1| hypothetical protein EUTSA_v10025767mg [Eutr... 69 8e-10
ref|XP_006284126.1| hypothetical protein CARUB_v10005258mg [Caps... 67 2e-09
ref|XP_002869206.1| hypothetical protein ARALYDRAFT_328381 [Arab... 67 2e-09
ref|XP_002323964.2| hypothetical protein POPTR_0017s07650g [Popu... 67 2e-09
gb|EMJ02495.1| hypothetical protein PRUPE_ppa008738mg [Prunus pe... 67 3e-09
ref|XP_004252713.1| PREDICTED: RING-H2 finger protein ATL54-like... 67 3e-09
ref|XP_003576630.1| PREDICTED: RING-H2 finger protein ATL51-like... 67 3e-09
ref|XP_006827953.1| hypothetical protein AMTR_s00008p00200880 [A... 66 4e-09
dbj|BAD19749.1| zinc finger (C3HC4-type RING finger) family prot... 66 4e-09
ref|XP_002449840.1| hypothetical protein SORBIDRAFT_05g024250 [S... 66 4e-09
gb|EEC84728.1| hypothetical protein OsI_31710 [Oryza sativa Indi... 66 4e-09
ref|NP_001130761.1| uncharacterized LOC100191865 [Zea mays] gi|1... 66 4e-09
gb|ABF19017.1| At4g33565 [Arabidopsis thaliana] 66 6e-09
gb|EOX92004.1| RING/U-box superfamily protein, putative [Theobro... 66 6e-09
gb|AAL91149.1| unknown protein [Arabidopsis thaliana] gi|2645058... 66 6e-09
>ref|XP_002522602.1| ring finger protein, putative [Ricinus communis]
gi|223538078|gb|EEF39689.1| ring finger protein,
putative [Ricinus communis]
Length = 378
Score = 76.6 bits (187), Expect = 3e-12
Identities = 52/133 (39%), Positives = 62/133 (46%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTADCVPGTSTTALXXXXXXXXXXXXN 180
KC HAFH+ CIDTWLRSH NCPLCRAPIVA +S A GTS +
Sbjct: 174 KCSHAFHIPCIDTWLRSHTNCPLCRAPIVA-NSARATSSEGTSES--------LSSGEET 224
Query: 181 TITSADNDQMGSRQTELGPGXXXXXXXXXXXXXXXXXXXVPVPILSAELKMPIDIGEDGF 360
I ++NDQ R+ E G G L+ E E+G
Sbjct: 225 RIGVSENDQESERELEGGDGELRVGIEEEREVEDENTRK-RSEFLNGE--------EEGI 275
Query: 361 QPIGRSFSMDSIS 399
QPI RS S+DS+S
Sbjct: 276 QPIRRSVSLDSLS 288
>ref|XP_002310500.2| hypothetical protein POPTR_0007s03610g, partial [Populus
trichocarpa] gi|550334061|gb|EEE90950.2| hypothetical
protein POPTR_0007s03610g, partial [Populus trichocarpa]
Length = 311
Score = 73.9 bits (180), Expect = 2e-11
Identities = 46/133 (34%), Positives = 61/133 (45%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTADCVPGTSTTALXXXXXXXXXXXXN 180
KC HAFH+ CIDTWLRSH NCPLCRAPIV +++ T+
Sbjct: 127 KCSHAFHIPCIDTWLRSHTNCPLCRAPIVTSTAIATSSQANLDDTS---------SGEET 177
Query: 181 TITSADNDQMGSRQTELGPGXXXXXXXXXXXXXXXXXXXVPVPILSAELKMPIDIGEDGF 360
I ++ DQ SR+ E G L+ E + ++ EDG
Sbjct: 178 RIEVSEEDQESSREMEGRDGGVRVVTEEESELQSEN--------LNEEEEEEVE-EEDGI 228
Query: 361 QPIGRSFSMDSIS 399
QP+ RS S+DS+S
Sbjct: 229 QPLRRSVSLDSLS 241
>ref|XP_004979696.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Setaria
italica]
Length = 399
Score = 71.2 bits (173), Expect = 1e-10
Identities = 29/45 (64%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPI-VAPSSVTADCVPGTST 132
+C HAFH GCIDTWLR+HVNCPLCRAP+ VA ++ +++ VPG +T
Sbjct: 232 RCGHAFHRGCIDTWLRAHVNCPLCRAPVQVAAAAASSNTVPGAAT 276
>ref|XP_004155494.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
Length = 360
Score = 69.3 bits (168), Expect = 5e-10
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTADCVP 120
KC HAFHL CIDTWLRSH NCP+CRAP+VA S+ A P
Sbjct: 186 KCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPP 225
>ref|XP_004137067.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
Length = 360
Score = 69.3 bits (168), Expect = 5e-10
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTADCVP 120
KC HAFHL CIDTWLRSH NCP+CRAP+VA S+ A P
Sbjct: 186 KCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPP 225
>ref|XP_006412342.1| hypothetical protein EUTSA_v10025767mg [Eutrema salsugineum]
gi|557113512|gb|ESQ53795.1| hypothetical protein
EUTSA_v10025767mg [Eutrema salsugineum]
Length = 315
Score = 68.6 bits (166), Expect = 8e-10
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTAD 111
KC HAFHL CIDTWLRSH NCPLCRAPIV ++V D
Sbjct: 180 KCRHAFHLSCIDTWLRSHTNCPLCRAPIVVTNTVNDD 216
>ref|XP_006284126.1| hypothetical protein CARUB_v10005258mg [Capsella rubella]
gi|482552831|gb|EOA17024.1| hypothetical protein
CARUB_v10005258mg [Capsella rubella]
Length = 321
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTAD 111
KC HAFHL CIDTWLRSH NCPLCRAPIV +++ D
Sbjct: 180 KCRHAFHLSCIDTWLRSHTNCPLCRAPIVVANTMMID 216
>ref|XP_002869206.1| hypothetical protein ARALYDRAFT_328381 [Arabidopsis lyrata subsp.
lyrata] gi|297315042|gb|EFH45465.1| hypothetical protein
ARALYDRAFT_328381 [Arabidopsis lyrata subsp. lyrata]
Length = 315
Score = 67.4 bits (163), Expect = 2e-09
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTAD 111
KC HAFHL CIDTWLRSH NCPLCRAPIV +++ D
Sbjct: 183 KCKHAFHLSCIDTWLRSHTNCPLCRAPIVVANTMIDD 219
>ref|XP_002323964.2| hypothetical protein POPTR_0017s07650g [Populus trichocarpa]
gi|550319719|gb|EEF04097.2| hypothetical protein
POPTR_0017s07650g [Populus trichocarpa]
Length = 338
Score = 67.0 bits (162), Expect = 2e-09
Identities = 45/137 (32%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTADCVPGTSTTALXXXXXXXXXXXXN 180
KC HAFH+ CIDTWLRSH NCPLCRAPIV + T+
Sbjct: 139 KCSHAFHIPCIDTWLRSHTNCPLCRAPIVTNTDEATSSQANLGNTS---------SGEET 189
Query: 181 TITSADNDQMGSRQTELGPGXXXXXXXXXXXXXXXXXXXVPVPILSAE----LKMPIDIG 348
I ++DQ R+TE V + I++ E ++
Sbjct: 190 QIEVLEDDQESDRETE--------------------GRDVELRIVTEEESRFQNENLNGE 229
Query: 349 EDGFQPIGRSFSMDSIS 399
EDG Q + RS S+DS+S
Sbjct: 230 EDGIQQLRRSVSLDSLS 246
>gb|EMJ02495.1| hypothetical protein PRUPE_ppa008738mg [Prunus persica]
Length = 321
Score = 66.6 bits (161), Expect = 3e-09
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTA 108
KC+HAFH+ CIDTWLRSH NCP+CRAPIV P + A
Sbjct: 175 KCNHAFHVPCIDTWLRSHTNCPMCRAPIVKPLATPA 210
>ref|XP_004252713.1| PREDICTED: RING-H2 finger protein ATL54-like [Solanum lycopersicum]
Length = 315
Score = 66.6 bits (161), Expect = 3e-09
Identities = 25/30 (83%), Positives = 29/30 (96%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVA 90
KC+HAFH+ CIDTWLRSHVNCPLCRAPI++
Sbjct: 157 KCNHAFHIDCIDTWLRSHVNCPLCRAPIIS 186
>ref|XP_003576630.1| PREDICTED: RING-H2 finger protein ATL51-like [Brachypodium
distachyon]
Length = 353
Score = 66.6 bits (161), Expect = 3e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTAD 111
+C H FH CIDTWLR+HVNCPLCR+P+V PS+ AD
Sbjct: 176 RCAHPFHAPCIDTWLRAHVNCPLCRSPVVVPSAAVAD 212
>ref|XP_006827953.1| hypothetical protein AMTR_s00008p00200880 [Amborella trichopoda]
gi|548832588|gb|ERM95369.1| hypothetical protein
AMTR_s00008p00200880 [Amborella trichopoda]
Length = 401
Score = 66.2 bits (160), Expect = 4e-09
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPS 96
KC HAFHL CIDTWLRSH NCPLCRAPIV+ S
Sbjct: 169 KCSHAFHLPCIDTWLRSHTNCPLCRAPIVSNS 200
>dbj|BAD19749.1| zinc finger (C3HC4-type RING finger) family protein-like [Oryza
sativa Japonica Group] gi|47848401|dbj|BAD22259.1| zinc
finger (C3HC4-type RING finger) family protein-like
[Oryza sativa Japonica Group]
gi|222641748|gb|EEE69880.1| hypothetical protein
OsJ_29697 [Oryza sativa Japonica Group]
Length = 357
Score = 66.2 bits (160), Expect = 4e-09
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTADCVPG 123
+C H FH CIDTWLR+HVNCPLCR+P+V PS + A G
Sbjct: 175 RCSHPFHAPCIDTWLRAHVNCPLCRSPVVVPSDLPATATEG 215
>ref|XP_002449840.1| hypothetical protein SORBIDRAFT_05g024250 [Sorghum bicolor]
gi|241935683|gb|EES08828.1| hypothetical protein
SORBIDRAFT_05g024250 [Sorghum bicolor]
Length = 424
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/47 (59%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTAD---CVPGTST 132
+C HAFH GCIDTWLR+HVNCPLCRAP+ + AD PG T
Sbjct: 252 RCGHAFHRGCIDTWLRAHVNCPLCRAPVQVSLAAAADNPNAAPGAPT 298
>gb|EEC84728.1| hypothetical protein OsI_31710 [Oryza sativa Indica Group]
Length = 357
Score = 66.2 bits (160), Expect = 4e-09
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTADCVPG 123
+C H FH CIDTWLR+HVNCPLCR+P+V PS + A G
Sbjct: 175 RCSHPFHAPCIDTWLRAHVNCPLCRSPVVVPSDLPATATEG 215
>ref|NP_001130761.1| uncharacterized LOC100191865 [Zea mays] gi|194690046|gb|ACF79107.1|
unknown [Zea mays] gi|194707674|gb|ACF87921.1| unknown
[Zea mays] gi|195645956|gb|ACG42446.1| zinc finger,
C3HC4 type family protein [Zea mays]
gi|223949085|gb|ACN28626.1| unknown [Zea mays]
gi|414591723|tpg|DAA42294.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 390
Score = 66.2 bits (160), Expect = 4e-09
Identities = 28/44 (63%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPI-VAPSSVTADCVPGTS 129
+C HAFH CIDTWLR+HVNCPLCRAP+ VA ++ + PGTS
Sbjct: 225 RCAHAFHRACIDTWLRAHVNCPLCRAPVQVAAAAANPNPAPGTS 268
>gb|ABF19017.1| At4g33565 [Arabidopsis thaliana]
Length = 204
Score = 65.9 bits (159), Expect = 6e-09
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTAD 111
KC HAFHL CIDTWLRSH NCPLCRAPIV +++ D
Sbjct: 72 KCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANTMIDD 108
>gb|EOX92004.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 386
Score = 65.9 bits (159), Expect = 6e-09
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSV 102
KC HAFHL CIDTWLRSH NCPLCRAP+V S V
Sbjct: 162 KCSHAFHLPCIDTWLRSHKNCPLCRAPVVCESIV 195
>gb|AAL91149.1| unknown protein [Arabidopsis thaliana] gi|26450582|dbj|BAC42403.1|
unknown protein [Arabidopsis thaliana]
Length = 314
Score = 65.9 bits (159), Expect = 6e-09
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +1
Query: 1 KCDHAFHLGCIDTWLRSHVNCPLCRAPIVAPSSVTAD 111
KC HAFHL CIDTWLRSH NCPLCRAPIV +++ D
Sbjct: 182 KCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANTMIDD 218