BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00012121
         (896 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   160   8e-37
dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Gr...   155   2e-35
ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|1...   155   2e-35
gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indi...   155   2e-35
ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group] g...   155   2e-35
dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]    155   2e-35
ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   154   6e-35
ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   148   3e-33
ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [S...   148   3e-33
tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamil...   142   1e-31
ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|1...   142   2e-31
ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   141   3e-31
ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   138   3e-30
ref|NP_001053687.1| Os04g0586700 [Oryza sativa Japonica Group] g...   136   1e-29
ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea ma...   132   1e-28
ref|XP_003581575.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   132   2e-28
gb|AFW59092.1| putative RING zinc finger domain superfamily prot...   131   4e-28
ref|XP_002443481.1| hypothetical protein SORBIDRAFT_08g020240 [S...   125   2e-26
ref|XP_002447001.1| hypothetical protein SORBIDRAFT_06g026740 [S...   124   4e-26
gb|EXB38370.1| E3 ubiquitin-protein ligase ATL4 [Morus notabilis]     122   2e-25

>ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Brachypodium
           distachyon]
          Length = 443

 Score =  160 bits (404), Expect = 8e-37
 Identities = 108/278 (38%), Positives = 133/278 (47%), Gaps = 24/278 (8%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI +LP+FT             DCAVCL PF  D ELRLLPACRHAFH++CVD WL TTP
Sbjct: 189 LIASLPLFTMASALAALPKSSPDCAVCLSPFLADAELRLLPACRHAFHAACVDAWLRTTP 248

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTG--------DQSASRSGSFRIEIGNVSRRRTLSA- 449
           SCPLCR                   G         +S++ S SFR+EIG++S RR+ +A 
Sbjct: 249 SCPLCRAAISLPHPPLPTAAAAAGAGAGLQEPLDSRSSTNSRSFRVEIGSISNRRSSAAG 308

Query: 450 -DDXXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXX 626
            DD            H+RTYS+G SF+Y VDEEVEAVVS+I                   
Sbjct: 309 GDD------------HRRTYSLG-SFDYRVDEEVEAVVSRI--ISRPTSAAAAKSTAGAA 353

Query: 627 XXXPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTGRN-- 800
              PGD +A AA   G+ GWL+DYVD                GRWS R+     +     
Sbjct: 354 PQGPGDALAEAA---GSRGWLRDYVD------RLASSASSLSGRWSARWSQSHHSAHRQE 404

Query: 801 ---SWDLEGSARR---------EAEAGGYYGFYRWLIG 878
               WD E +A           E +A G  G YRW++G
Sbjct: 405 EPWQWDPEAAAAAMSSAPRAADEDDAAGLMGLYRWIVG 442


>dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Group]
          Length = 502

 Score =  155 bits (392), Expect = 2e-35
 Identities = 104/271 (38%), Positives = 133/271 (49%), Gaps = 17/271 (6%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI +LP+FT             DCAVCL PF P+ ELRLLPACRHAFH+SCVD WL TTP
Sbjct: 255 LIASLPLFTMASALAALPKSSPDCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTP 314

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTG--------DQSASRSGSFRIEIGNVSRRRTLSAD 452
           SCPLCR                  +          +S++ S SFR+EIG++S RR+ +A 
Sbjct: 315 SCPLCRATVSLPHPPLPTAAAAAASNAAQQDPLDSRSSNNSRSFRVEIGSISNRRSSAAA 374

Query: 453 DXXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXXXX 632
           D             +RTYS+G SF+Y VDEEVEAVVS+I                     
Sbjct: 375 D------------DRRTYSLG-SFDYRVDEEVEAVVSRIA------RPAAAKSTTGSVTP 415

Query: 633 XPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTGRNS--- 803
            PG+ +A AA   G+ GWL++YVD                GRWS R+     + R     
Sbjct: 416 APGEALAEAA---GSRGWLREYVD--RLASSASSLSGRWSGRWSARWSQSHHSNRQEDSW 470

Query: 804 -WDLEG---SARR--EAEAGGYYGFYRWLIG 878
            WD E    SA R  + +  G+   YRW++G
Sbjct: 471 RWDPEAAVMSAPRGVDDDEPGFVTLYRWIVG 501


>ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|194689566|gb|ACF78867.1|
           unknown [Zea mays] gi|194707760|gb|ACF87964.1| unknown
           [Zea mays] gi|413938299|gb|AFW72850.1| putative RING
           zinc finger domain superfamily protein [Zea mays]
          Length = 378

 Score =  155 bits (392), Expect = 2e-35
 Identities = 107/285 (37%), Positives = 133/285 (46%), Gaps = 31/285 (10%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI +LP+FT             DCAVCL PF PD +LRLLPACRHAFH++CVD WL TTP
Sbjct: 121 LIASLPLFTMASALAALPKSSPDCAVCLSPFSPDADLRLLPACRHAFHAACVDAWLRTTP 180

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTGDQ--------SASRSGSFRIEIGNVSRRRTLSAD 452
           SCPLCR                     Q        S+S S SFR+EIG+VS RR+ +A 
Sbjct: 181 SCPLCRAAVSLPHPPLPTAPPLAAGSAQEALDSRVSSSSNSRSFRVEIGSVSNRRSSAAG 240

Query: 453 DXXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXXXX 632
           D             +RTYS+G SF+Y VDEEVEAVVS+IT                    
Sbjct: 241 D------------DRRTYSLG-SFDYRVDEEVEAVVSRIT------RPAVSAAAKSETQA 281

Query: 633 XPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTGRNS--- 803
            PG+ +A AA   G+ GWL++YVD                GRWS R+     + R S   
Sbjct: 282 APGEALAEAA---GSRGWLREYVD------RLASSASSLSGRWSARWSQGHHSARWSQGH 332

Query: 804 --------------WDLEGSA------RREAEAGGYYGFYRWLIG 878
                         WD E +A        + E  G+   YRW++G
Sbjct: 333 HSRSHSNRQEDSLWWDPEAAAGAAMHRAPDEEEPGFVALYRWIVG 377


>gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indica Group]
          Length = 267

 Score =  155 bits (392), Expect = 2e-35
 Identities = 104/271 (38%), Positives = 133/271 (49%), Gaps = 17/271 (6%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI +LP+FT             DCAVCL PF P+ ELRLLPACRHAFH+SCVD WL TTP
Sbjct: 20  LIASLPLFTMASALAALPKSSPDCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTP 79

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTG--------DQSASRSGSFRIEIGNVSRRRTLSAD 452
           SCPLCR                  +          +S++ S SFR+EIG++S RR+ +A 
Sbjct: 80  SCPLCRATVSLPHPPLPTAAAAAASNAAQQDPLDSRSSNNSRSFRVEIGSISNRRSSAAA 139

Query: 453 DXXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXXXX 632
           D             +RTYS+G SF+Y VDEEVEAVVS+I                     
Sbjct: 140 D------------DRRTYSLG-SFDYRVDEEVEAVVSRIA------RPAAAKSTTGSVTP 180

Query: 633 XPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTGRNS--- 803
            PG+ +A AA   G+ GWL++YVD                GRWS R+     + R     
Sbjct: 181 APGEALAEAA---GSRGWLREYVD--RLASSASSLSGRWSGRWSARWSQSHHSNRQEDSW 235

Query: 804 -WDLEG---SARR--EAEAGGYYGFYRWLIG 878
            WD E    SA R  + +  G+   YRW++G
Sbjct: 236 RWDPEAAVMSAPRGVDDDEPGFVTLYRWIVG 266


>ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group]
           gi|113537311|dbj|BAF09694.1| Os02g0688800 [Oryza sativa
           Japonica Group] gi|125583300|gb|EAZ24231.1| hypothetical
           protein OsJ_07979 [Oryza sativa Japonica Group]
          Length = 373

 Score =  155 bits (392), Expect = 2e-35
 Identities = 104/271 (38%), Positives = 133/271 (49%), Gaps = 17/271 (6%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI +LP+FT             DCAVCL PF P+ ELRLLPACRHAFH+SCVD WL TTP
Sbjct: 126 LIASLPLFTMASALAALPKSSPDCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTP 185

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTG--------DQSASRSGSFRIEIGNVSRRRTLSAD 452
           SCPLCR                  +          +S++ S SFR+EIG++S RR+ +A 
Sbjct: 186 SCPLCRATVSLPHPPLPTAAAAAASNAAQQDPLDSRSSNNSRSFRVEIGSISNRRSSAAA 245

Query: 453 DXXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXXXX 632
           D             +RTYS+G SF+Y VDEEVEAVVS+I                     
Sbjct: 246 D------------DRRTYSLG-SFDYRVDEEVEAVVSRIA------RPAAAKSTTGSVTP 286

Query: 633 XPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTGRNS--- 803
            PG+ +A AA   G+ GWL++YVD                GRWS R+     + R     
Sbjct: 287 APGEALAEAA---GSRGWLREYVD--RLASSASSLSGRWSGRWSARWSQSHHSNRQEDSW 341

Query: 804 -WDLEG---SARR--EAEAGGYYGFYRWLIG 878
            WD E    SA R  + +  G+   YRW++G
Sbjct: 342 RWDPEAAVMSAPRGVDDDEPGFVTLYRWIVG 372


>dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 373

 Score =  155 bits (391), Expect = 2e-35
 Identities = 102/268 (38%), Positives = 130/268 (48%), Gaps = 14/268 (5%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI +LP+FT             DCAVCL PF PD ELRLLPACRHAFH++CVD WL  TP
Sbjct: 128 LIASLPLFTMASALAALPKSSPDCAVCLSPFVPDAELRLLPACRHAFHAACVDAWLRNTP 187

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTGD-----QSASRSGSFRIEIGNVSRRRTLSADDXX 461
           SCPLCR                    +      S++ S SFR+EIG+VS RR+ +A D  
Sbjct: 188 SCPLCRAAISLPHPPLPAAYTGAAQQEPLDARSSSNASRSFRVEIGSVSNRRSSAAGD-- 245

Query: 462 XXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXXXXXPG 641
                      +RTYS+G SF+Y VDEEVEAVV++I                      PG
Sbjct: 246 ----------DRRTYSLG-SFDYRVDEEVEAVVARIA-RPAAAAKSGVAGQRAAPQQGPG 293

Query: 642 DTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTGRNS----WD 809
           + +A AA   G+ GWL++YVD                GRWS R+     + R      WD
Sbjct: 294 EALAEAA---GSRGWLREYVD------RLASSASSLSGRWSARWSQGHHSHRQEDSWRWD 344

Query: 810 LEGSA-----RREAEAGGYYGFYRWLIG 878
            E +A       + +  G  G YRW++G
Sbjct: 345 PEAAAMAAPRAADEDEAGLMGLYRWIVG 372


>ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
          Length = 402

 Score =  154 bits (388), Expect = 6e-35
 Identities = 107/293 (36%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI +LP+FT             DCAVCL PF PD ELRLLPACRHAFH++CVD WL TTP
Sbjct: 132 LIASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTP 191

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTGDQ------------SASRSGSFRIEIGNVSRRRT 440
           SCPLCR                                  S++ S SFR+EIG+VS RR+
Sbjct: 192 SCPLCRAAVSLPHPPLPTAAPAAAAAGPGAQEPLDSRVGGSSNNSRSFRVEIGSVSNRRS 251

Query: 441 LSADDXXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXX 620
            +A D             +RTYS+G SF+Y VDEEVEAVVS+IT                
Sbjct: 252 SAAGD------------DRRTYSLG-SFDYRVDEEVEAVVSRIT----RPAVSAAAAKSA 294

Query: 621 XXXXXPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRY--------- 773
                P   V A A  +G+ GWL++YVD                GRWS R+         
Sbjct: 295 AQQAVPATPVEALAEAAGSRGWLREYVD------RLASSASSLSGRWSARWSQGHHSARW 348

Query: 774 -DGDGGTGRN-----------SWDLEGSA------RREAEAGGYYGFYRWLIG 878
             G G   RN            WD E +A        + E  G+   YRW++G
Sbjct: 349 SQGHGHHSRNHSQSHRQEDSWRWDPEAAAGAAMHRAPDEEEPGFVALYRWIVG 401


>ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
          Length = 380

 Score =  148 bits (373), Expect = 3e-33
 Identities = 103/278 (37%), Positives = 124/278 (44%), Gaps = 24/278 (8%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LID+LP+FT             DCAVCL PF PD ELRLLPACRHAFH++CVD WL TTP
Sbjct: 118 LIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRTTP 177

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTGDQSASRSG----SFRIEIGNVSRRRTLSADDXXX 464
           SCPLCR                     Q  ++ G    SF +EIG VS R +  A     
Sbjct: 178 SCPLCRAAVAPLHPSLTAAMLAAAQQQQQPAQRGRPGSSFLVEIGTVSNRGSSPA----- 232

Query: 465 XXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQI---------TXXXXXXXXXXXXXXX 617
                    + RTYS+G SF Y +DEEVEAVVS++         +               
Sbjct: 233 -AARGGGDRNSRTYSLG-SFNYQIDEEVEAVVSRVARIIAARESSTVKEDKPPAEEGSAP 290

Query: 618 XXXXXXPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTGR 797
                 PG+ VA AAG S   GWL++YVD                 RWS R+   GG  R
Sbjct: 291 APAPSPPGEAVAEAAGSS--RGWLREYVDRLASSAYTFSE------RWSSRW-SQGGQQR 341

Query: 798 NS----WDLEGSARREAEAG-------GYYGFYRWLIG 878
                 WD E +A   A  G        +   YRW+ G
Sbjct: 342 QEEPWLWDAEAAAGMSAPPGSDDEEETAFMVMYRWIAG 379


>ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [Sorghum bicolor]
           gi|241934288|gb|EES07433.1| hypothetical protein
           SORBIDRAFT_04g031430 [Sorghum bicolor]
          Length = 400

 Score =  148 bits (373), Expect = 3e-33
 Identities = 108/295 (36%), Positives = 133/295 (45%), Gaps = 41/295 (13%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI +LP+FT             DCAVCL PF PD ELRLLPACRHAFH++CVD WL TTP
Sbjct: 128 LIASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTP 187

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVT------------GDQSASRSGSFRIEIGNVSRRRT 440
           SCPLCR                                 + +S S SFR+EIG+VS RR+
Sbjct: 188 SCPLCRAAVSLPHPPLPTAPPPPPQPAAGPAAQQEPLDSRVSSNSRSFRVEIGSVSNRRS 247

Query: 441 LSADDXXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXX 620
            +A D             +RTYS+GS F+Y VDEEVEAVVS+IT                
Sbjct: 248 SAAGDD------------RRTYSLGS-FDYRVDEEVEAVVSRIT-RPAVSAAAKSATHQA 293

Query: 621 XXXXXPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRY--------- 773
                PG+ +A AA   G+ GWL++YVD                GRWS R+         
Sbjct: 294 AAPATPGEALAEAA---GSRGWLREYVD------RLASSASSLSGRWSARWSQGHHSARW 344

Query: 774 -DGDGGTGRNS-------------WDLE---GSARREA---EAGGYYGFYRWLIG 878
             G G   R+              WD E   G+A   A   E   +   YRW++G
Sbjct: 345 SQGQGHHSRSQSQSQSYRQEDSWRWDPEAATGAAMHRAPDEEEPAFVALYRWIVG 399


>tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 397

 Score =  142 bits (359), Expect = 1e-31
 Identities = 99/284 (34%), Positives = 124/284 (43%), Gaps = 30/284 (10%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LID+LP+FT             DCAVCL PF PD +LRLLPACRHAFH++CVD WL TTP
Sbjct: 124 LIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTP 183

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTGDQSASRSG-SFRIEIGNVSRRRTLSADDXXXXXX 473
           SCPLCR                     +     G SF +E+G VS R + +A        
Sbjct: 184 SCPLCRAAVALPHPSLSGMLAAAQARARDRPGPGSSFLVEMGTVSNRGSPAA---AGGGR 240

Query: 474 XXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQI-----------------TXXXXXXXXXX 602
                 + RTYS+GS+F+Y +DEEVEAVVS++                 +          
Sbjct: 241 DRDRNRNSRTYSLGSAFDYQIDEEVEAVVSRVARIAAARESSAVKEEKPSAEQGSAPAAA 300

Query: 603 XXXXXXXXXXXPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRY-DG 779
                      PG+TVA AAG S   GWL++YVD                 RWS R+  G
Sbjct: 301 PAPSPSSQPPPPGETVAEAAGSS--RGWLREYVDRLASSAYTLSE------RWSSRWSQG 352

Query: 780 DGGTGRNS----WDLEGSARREA-------EAGGYYGFYRWLIG 878
                R      WD E +    A       E   +   YRW+ G
Sbjct: 353 QSQQQRQEEPWLWDAEAAEMSAAPGSDDDEEETAFMAMYRWIAG 396


>ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|195651079|gb|ACG45007.1|
           RING-H2 finger protein ATL3J [Zea mays]
          Length = 397

 Score =  142 bits (357), Expect = 2e-31
 Identities = 101/288 (35%), Positives = 126/288 (43%), Gaps = 34/288 (11%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LID+LP+FT             DCAVCL PF PD +LRLLPACRHAFH++CVD WL TTP
Sbjct: 122 LIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTP 181

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTGDQSASRSG-----SFRIEIGNVSRRRTLSADDXX 461
           SCPLCR                     Q  +R G     SF +E+G VS R + +A    
Sbjct: 182 SCPLCR--AAVALPHPSLSGMLAAAQAQRPARPGPGPGPSFLVEMGTVSSRGSPAA---A 236

Query: 462 XXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQI-----------------TXXXXXX 590
                     + RTYS+GS+F+Y +DEEVEAVVS++                 +      
Sbjct: 237 GGGRDRNRNRNSRTYSLGSAFDYQIDEEVEAVVSRVARIAAARESSAVKEEKPSAEQGSA 296

Query: 591 XXXXXXXXXXXXXXXPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHR 770
                          PG+TVA AAG S   GWL++YVD                 RWS R
Sbjct: 297 PAPAPAPSPSSQPPPPGETVAEAAGSS--RGWLREYVDRLASSAYTLSE------RWSSR 348

Query: 771 Y-DGDGGTGRNS----WDLEGSARREA-------EAGGYYGFYRWLIG 878
           +  G     R      WD E +    A       E   +   YRW+ G
Sbjct: 349 WSQGQSQQQRQEEPWLWDAEAAEMSAAPGSDDDEEETAFMAMYRWIAG 396


>ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Oryza
           brachyantha]
          Length = 360

 Score =  141 bits (356), Expect = 3e-31
 Identities = 92/265 (34%), Positives = 114/265 (43%), Gaps = 11/265 (4%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI++LP+FT             DCAVCL PF  D ELRLLPACRHAFH++CVD WL TTP
Sbjct: 106 LIESLPLFTMASSLAALPKSSPDCAVCLSPFTLDAELRLLPACRHAFHAACVDAWLRTTP 165

Query: 297 SCPLCR---XXXXXXXXXXXXXXXXXVTGDQSASRSGSFRIEIGNVSRRRTLSADDXXXX 467
           SCPLCR                        +S  RS SFR+E+G+VS R + +A      
Sbjct: 166 SCPLCRATVSIPHPSISAILASEHPPPPEPRSRDRSRSFRVEMGSVSNRSSSTAS----- 220

Query: 468 XXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXXXXXPGDT 647
                    + TYS+G SF+Y +DEEVEAVVS+                       P   
Sbjct: 221 -----GGNSRPTYSLG-SFDYNIDEEVEAVVSRAAPMTARSGAIVKDDKPAAEQSPPPPG 274

Query: 648 VAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTGRNS---WDLEG 818
            A A     T GWL++YVD                 RWS  +       +     WD E 
Sbjct: 275 EAGAEAAGATRGWLREYVDRLASSASSLSFSGRWSSRWSQSHQSQHSQRQEEPWLWDAEA 334

Query: 819 -----SARREAEAGGYYGFYRWLIG 878
                    E E   +   YRW+ G
Sbjct: 335 VRMSPPGTEEEEETAFMVLYRWIAG 359


>ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
          Length = 256

 Score =  138 bits (347), Expect = 3e-30
 Identities = 91/248 (36%), Positives = 114/248 (45%), Gaps = 7/248 (2%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI +LP+FT             DCAVCL PF PD  LRLLP CRHAFH++C+D WL T P
Sbjct: 4   LIASLPLFTMASALAALPKNSPDCAVCLSPFEPDAGLRLLPTCRHAFHAACIDAWLRTNP 63

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTGDQ---SASRSGSFRIEIGNVSRRRTLSADDXXXX 467
            CP+CR                   G +   S + S SFR+E+G+VS R + SA      
Sbjct: 64  VCPICR--SAVSFPLPPLPAPAAAAGQEPLGSRTSSRSFRVELGSVSNRLSCSA------ 115

Query: 468 XXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXXXXXPGDT 647
                   H+RTYS+G SF Y VDEEVEA+VS+I                          
Sbjct: 116 --AGGDGDHRRTYSLGGSFNYRVDEEVEAIVSRIVRPAAAPRLRPAAPAAPATAAH---- 169

Query: 648 VAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYD-GDGGTGRNS---WDLE 815
           + A A   G+ GWL +Y+D                GRWS R+  G  G  R+    WDLE
Sbjct: 170 IEALAEAVGSRGWLGEYLD--RVAASASSLSGRWSGRWSWRWSLGHHGQRRDESWRWDLE 227

Query: 816 GSARREAE 839
            + R   E
Sbjct: 228 AACRAPRE 235


>ref|NP_001053687.1| Os04g0586700 [Oryza sativa Japonica Group]
           gi|32488757|emb|CAE04310.1| OSJNBb0016D16.1 [Oryza
           sativa Japonica Group] gi|38344287|emb|CAE03770.2|
           OSJNBa0013K16.19 [Oryza sativa Japonica Group]
           gi|113565258|dbj|BAF15601.1| Os04g0586700 [Oryza sativa
           Japonica Group] gi|125549503|gb|EAY95325.1| hypothetical
           protein OsI_17152 [Oryza sativa Indica Group]
           gi|215693347|dbj|BAG88729.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 359

 Score =  136 bits (342), Expect = 1e-29
 Identities = 95/267 (35%), Positives = 118/267 (44%), Gaps = 13/267 (4%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LI++LP+FT             DCAVCL PF  D ELRLLPACRHAFH++CVD WL TTP
Sbjct: 105 LIESLPLFTMASSLAALPKSSPDCAVCLSPFTLDAELRLLPACRHAFHAACVDAWLRTTP 164

Query: 297 SCPLCR---XXXXXXXXXXXXXXXXXVTGDQSASRSGSFRIEIGNVSRRRTLSADDXXXX 467
           SCPLCR                        +S  RS SFR+E+G+VS R   +A      
Sbjct: 165 SCPLCRATVTLPHPSISAILAAEQPPPPEPRSRDRSRSFRVEMGSVSNRSASTATGGNA- 223

Query: 468 XXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQIT--XXXXXXXXXXXXXXXXXXXXXPG 641
                    + TYS+G +F+Y +DEEVEAVVS+                         PG
Sbjct: 224 ---------RPTYSLG-TFDYHIDEEVEAVVSRAAPMTTRSAAAVKEDKPAAEQSPPPPG 273

Query: 642 DTVAAAAGRSGTGGWLKDYVD-XXXXXXXXXXXXXXXXGRWSHRYDGDGGTGRNS---WD 809
           + VA AAG   T GWL++YV+                  RWS  Y       +     WD
Sbjct: 274 EAVAEAAG--ATRGWLREYVERLATSASSLSSFSGRWSSRWSQSYQSHHSHSQEEPWLWD 331

Query: 810 LE----GSARREAEAGGYYGFYRWLIG 878
            E         E E   +   YRW+ G
Sbjct: 332 AEAVRMSPPGTEEEETAFMVLYRWIAG 358


>ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea mays]
           gi|194702970|gb|ACF85569.1| unknown [Zea mays]
          Length = 265

 Score =  132 bits (333), Expect = 1e-28
 Identities = 92/262 (35%), Positives = 115/262 (43%), Gaps = 30/262 (11%)
 Frame = +3

Query: 183 DCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTPSCPLCRXXXXXXXXXXXXXXXX 362
           DCAVCL PF PD +LRLLPACRHAFH++CVD WL TTPSCPLCR                
Sbjct: 14  DCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVALPHPSLSGMLAA 73

Query: 363 XVTGDQSASRSG-SFRIEIGNVSRRRTLSADDXXXXXXXXXXXXHQRTYSIGSSFEYMVD 539
                +     G SF +E+G VS R + +A              + RTYS+GS+F+Y +D
Sbjct: 74  AQARARDRPGPGSSFLVEMGTVSNRGSPAA---AGGGRDRDRNRNSRTYSLGSAFDYQID 130

Query: 540 EEVEAVVSQI-----------------TXXXXXXXXXXXXXXXXXXXXXPGDTVAAAAGR 668
           EEVEAVVS++                 +                     PG+TVA AAG 
Sbjct: 131 EEVEAVVSRVARIAAARESSAVKEEKPSAEQGSAPAAAPAPSPSSQPPPPGETVAEAAGS 190

Query: 669 SGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRY-DGDGGTGRNS----WDLEGSARRE 833
           S   GWL++YVD                 RWS R+  G     R      WD E +    
Sbjct: 191 S--RGWLREYVDRLASSAYTLSE------RWSSRWSQGQSQQQRQEEPWLWDAEAAEMSA 242

Query: 834 A-------EAGGYYGFYRWLIG 878
           A       E   +   YRW+ G
Sbjct: 243 APGSDDDEEETAFMAMYRWIAG 264


>ref|XP_003581575.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Brachypodium
           distachyon]
          Length = 359

 Score =  132 bits (331), Expect = 2e-28
 Identities = 96/271 (35%), Positives = 117/271 (43%), Gaps = 19/271 (7%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLH-TT 293
           LI++LP FT             DCAVCL PF PD ELRLLPACRHAFH++CVD WL    
Sbjct: 101 LIESLPRFTMASALAALPKSSPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRAAA 160

Query: 294 PSCPLCRXXXXXXXXXXXXXXXXXV---------TGDQSASRSGSFRIEIGNVSRRRTLS 446
           P+CPLCR                                  RS SFR+E+G+V   R  S
Sbjct: 161 PTCPLCRAAVTLQHPSVAAILAAAAQPPPGPETRMSSSREYRSRSFRVEMGSVVSSRGSS 220

Query: 447 ADDXXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXX 626
                            RTYS+G SF+Y +DEEVEAVV +                    
Sbjct: 221 ---------PAAAGSDSRTYSLG-SFDYHIDEEVEAVVPRTA--RADITKEEKPSAAPGT 268

Query: 627 XXXPGDTVAAAAGRS-GTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTGRNS 803
              PG+ VA AAG S  T GWL+DY+D                GRWS R+  +    RN 
Sbjct: 269 PSPPGEAVAEAAGSSPSTRGWLRDYLD---RFTSSASSSFSFSGRWSSRWSQNNQGQRNE 325

Query: 804 ----WDLEG----SARREAEAGGYYGFYRWL 872
               WD E     +A  + E   +   YRW+
Sbjct: 326 EPWLWDTEAAAVPAAGSDEEETAFMVLYRWI 356


>gb|AFW59092.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 372

 Score =  131 bits (329), Expect = 4e-28
 Identities = 95/279 (34%), Positives = 119/279 (42%), Gaps = 25/279 (8%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LID+LP+FT             DCAVCL PF PD ELRLLPACRHAFH++CVD WL T P
Sbjct: 120 LIDSLPLFTMASALASLPGSSPDCAVCLSPFAPDAELRLLPACRHAFHAACVDAWLRTAP 179

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTGDQ-------SASRSG-SFRIEIGNVSRRRTLSAD 452
           SCPLCR                     Q       +  RSG SF +E+G VS R      
Sbjct: 180 SCPLCRSAVALPPHPSRSDMHAAGAAQQPPTPTPRARGRSGPSFLVEMGTVSNR------ 233

Query: 453 DXXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQI------TXXXXXXXXXXXXXX 614
                        + RTYS+G SF+Y +DEEVEAVVS++      T              
Sbjct: 234 --------GGGQRNSRTYSLG-SFDYQIDEEVEAVVSRVARIIASTVKEDKPPSVEEGPP 284

Query: 615 XXXXXXXPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRYDGDGGTG 794
                  P +TV ++       GWL++YVD                 RWS R+     + 
Sbjct: 285 LSLSPPPPRETVGSSR------GWLREYVDRLASSAYTFSE------RWSSRWSQGLQSQ 332

Query: 795 RNS-----WDLEGSARREAEAGG------YYGFYRWLIG 878
           +       WD E +A   A   G      +   YRW+ G
Sbjct: 333 QRQEEPWLWDAEAAAMSAAPGSGDEEETAFMVMYRWIAG 371


>ref|XP_002443481.1| hypothetical protein SORBIDRAFT_08g020240 [Sorghum bicolor]
           gi|241944174|gb|EES17319.1| hypothetical protein
           SORBIDRAFT_08g020240 [Sorghum bicolor]
          Length = 387

 Score =  125 bits (315), Expect = 2e-26
 Identities = 76/195 (38%), Positives = 101/195 (51%)
 Frame = +3

Query: 120 IDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTPS 299
           I +LP+FT             DCAVCL PF    ELRLLPACRHAFH++C+D WL T P 
Sbjct: 136 IASLPLFTMASALAALPKNSPDCAVCLSPFDASAELRLLPACRHAFHAACIDAWLRTNPV 195

Query: 300 CPLCRXXXXXXXXXXXXXXXXXVTGDQSASRSGSFRIEIGNVSRRRTLSADDXXXXXXXX 479
           CP+CR                 + G +++ R  SFR+E+G+VS RR+ +A          
Sbjct: 196 CPICRSTVSPPLLTPFPVDQEPL-GTRTSCR--SFRVELGSVSNRRSSAA---------- 242

Query: 480 XXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXXXXXPGDTVAAA 659
                +RTYS+G SF+Y V+EEVEA+VS+I                      PG+  AA 
Sbjct: 243 -GGDERRTYSLGGSFDYRVEEEVEAIVSRIV----RPTAAAARPRPAPATAAPGE--AAL 295

Query: 660 AGRSGTGGWLKDYVD 704
           A   G+ GWL +Y+D
Sbjct: 296 AEAVGSRGWLGEYLD 310


>ref|XP_002447001.1| hypothetical protein SORBIDRAFT_06g026740 [Sorghum bicolor]
           gi|241938184|gb|EES11329.1| hypothetical protein
           SORBIDRAFT_06g026740 [Sorghum bicolor]
          Length = 398

 Score =  124 bits (312), Expect = 4e-26
 Identities = 97/287 (33%), Positives = 120/287 (41%), Gaps = 33/287 (11%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXXDCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWLHTTP 296
           LID+LP+FT             DCAVCL  F PD ELRL+PA R  F+++CVD WL TTP
Sbjct: 123 LIDSLPLFTMASSLAELPKSSPDCAVCLTLFTPDAELRLMPASRRKFYAACVDAWLRTTP 182

Query: 297 SCPLCRXXXXXXXXXXXXXXXXXVTGDQSAS------RSG-SFRIEIGNVSRRRTLSADD 455
           SCPLCR                     + AS      RSG SF +E+G VS  R      
Sbjct: 183 SCPLCRAAVVAFPHPSLSAMLAAAQQQRPASPRTRDPRSGSSFLVEMGTVSSSR---GSP 239

Query: 456 XXXXXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQIT--------------XXXXXXX 593
                       + RTYS+G SF+Y +DEEVEAVVS++                      
Sbjct: 240 VAAGGGGGDRNRNSRTYSLG-SFDYQIDEEVEAVVSRVARITARESSTVKEEMEKPSGEE 298

Query: 594 XXXXXXXXXXXXXXPGDTVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRWSHRY 773
                         PG+TVA AAG S   GWL++YVD                 RWS R+
Sbjct: 299 VSARPPAPAPSPPPPGETVAEAAGSS--RGWLREYVDRLASSAYTLSE------RWSSRW 350

Query: 774 -DGDGGTGRNS----WDLEGS-------ARREAEAGGYYGFYRWLIG 878
             G     R      WD E +       +  E E   +   YRW+ G
Sbjct: 351 SQGQSQQQRQEEPWLWDTEAADMSAAPGSDEEEEETAFMVMYRWIAG 397


>gb|EXB38370.1| E3 ubiquitin-protein ligase ATL4 [Morus notabilis]
          Length = 357

 Score =  122 bits (305), Expect = 2e-25
 Identities = 91/262 (34%), Positives = 114/262 (43%), Gaps = 8/262 (3%)
 Frame = +3

Query: 117 LIDTLPVFTFXXXXXXXXXXXX----DCAVCLCPFRPDDELRLLPACRHAFHSSCVDPWL 284
           LI+ LP+F F                DCAVCL  F PDD+LRLLP C HAFH+ CVD WL
Sbjct: 113 LIEALPLFAFASVTRRGAATSAIFAADCAVCLSKFEPDDQLRLLPLCCHAFHALCVDTWL 172

Query: 285 HTTPSCPLCRXXXXXXXXXXXXXXXXXVTGDQSASRSGSFRIEIGNVSRRRTLSADDXXX 464
            +  +CPLCR                    ++    SGSFR+EIGNVSRR+T  +D    
Sbjct: 173 QSNQTCPLCRSPIFVSDAEILKSLGEI---NRRGDNSGSFRLEIGNVSRRQTTPSDS--- 226

Query: 465 XXXXXXXXXHQRTYSIGSSFEYMVDEEVEAVVSQITXXXXXXXXXXXXXXXXXXXXXPGD 644
                      R+YSIG SF+Y+V+E+ E V   +T                     P  
Sbjct: 227 -NFSGDLGRRSRSYSIG-SFDYLVEEDSEVV---LTNAHRRTISDFKEPPPPASIPVPEP 281

Query: 645 TVAAAAGRSGTGGWLKDYVDXXXXXXXXXXXXXXXXGRW----SHRYDGDGGTGRNSWDL 812
           +V A    SG   WLK+YVD                GR+    S R D   G G   WDL
Sbjct: 282 SVVAEVASSGR-SWLKEYVDRLSMSLSSRAMSFRSSGRFFSGSSRRSDVVLGVG--EWDL 338

Query: 813 EGSARREAEAGGYYGFYRWLIG 878
           E S   E  +      +RW+ G
Sbjct: 339 EASRVGEEIS----ELFRWVSG 356