BLASTX nr result
ID: Zingiber25_contig00012008
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00012008
(693 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-26
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,... 74 7e-26
gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein... 74 3e-25
ref|XP_002305605.1| pentatricopeptide repeat-containing family p... 72 3e-24
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr... 75 1e-21
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-21
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps... 70 2e-19
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c... 64 3e-17
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar... 64 3e-17
gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus pe... 76 1e-11
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi... 70 8e-10
ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi... 68 2e-09
gb|AFV70836.1| tetratricopeptide repeat-like superfamily protein... 67 4e-09
gb|AFV70831.1| tetratricopeptide repeat-like superfamily protein... 67 7e-09
gb|AFV70830.1| tetratricopeptide repeat-like superfamily protein... 67 7e-09
gb|AFV70818.1| tetratricopeptide repeat-like superfamily protein... 67 7e-09
ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp.... 67 7e-09
gb|AFV70842.1| tetratricopeptide repeat-like superfamily protein... 66 9e-09
gb|AFV70829.1| tetratricopeptide repeat-like superfamily protein... 66 9e-09
gb|AFV70822.1| tetratricopeptide repeat-like superfamily protein... 66 9e-09
>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Vitis vinifera]
Length = 569
Score = 81.6 bits (200), Expect(2) = 1e-26
Identities = 44/129 (34%), Positives = 78/129 (60%)
Frame = -1
Query: 666 STLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDDLVRRVLSMTR 487
ST P++ WRA +K L +QI+S+LL R +W+ LR+ +L + L ++L T+
Sbjct: 16 STTPLN--WRAQIKQNQLISQISSILLQRHNWVTLLRNFNL--SSKLTPSLFHQILLKTQ 71
Query: 486 SHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHPHVVVN 307
+P SL FFNW +++LG++PDL + + I + +GL A+ +LD ++ + V+V+
Sbjct: 72 KNPQSSLSFFNWVRTNLGFQPDLAAHSQIIRISIQSGLFQPAKGILDSLIETQKVSVLVD 131
Query: 306 SLSRASQQK 280
S+ +A + K
Sbjct: 132 SVIQACRGK 140
Score = 65.1 bits (157), Expect(2) = 1e-26
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = -3
Query: 256 TTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLLCREGKLEKA 77
+ RSCNALLD+L + +++AW A +RNG +PD + ++ +LC+ GKLE+
Sbjct: 178 SVRSCNALLDSLQRENE----IKLAWCVCGALIRNGVLPD---YVRIALILCKNGKLERV 230
Query: 76 VLLLVVG-GCKDSAYDLVIDCFCRKG 2
V LL + C Y LVIDC+C +G
Sbjct: 231 VRLLDMSIVCNALIYKLVIDCYCERG 256
>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 599
Score = 73.6 bits (179), Expect(2) = 7e-26
Identities = 35/94 (37%), Positives = 53/94 (56%)
Frame = -3
Query: 283 KIVAFRCQITTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLL 104
K+ C + +CN LLDAL +R+AW Y A +R G +PD TWSL++ +L
Sbjct: 190 KMRVIGCTPSVHACNVLLDALQRESE----IRLAWCFYCAMIRVGVLPDKFTWSLVAHIL 245
Query: 103 CREGKLEKAVLLLVVGGCKDSAYDLVIDCFCRKG 2
C++G E+ V LL +G C Y+ V+D + + G
Sbjct: 246 CKDGNFERIVKLLDMGICNSVMYNAVVDYYSKNG 279
Score = 70.5 bits (171), Expect(2) = 7e-26
Identities = 38/131 (29%), Positives = 74/131 (56%)
Frame = -1
Query: 669 FSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDDLVRRVLSMT 490
+ST WR ++ L ++I+++LL R +WI L++ L L + L ++L T
Sbjct: 34 YSTSTSKISWRTRIQQNQLVSEISTILLQRNNWIPLLQN--LNLSSKLTPFLFFQILHKT 91
Query: 489 RSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHPHVVV 310
++H +SL FFNWA+++L + PDL S + + + L A+ +LD ++ +Y ++ +
Sbjct: 92 QTHAQISLNFFNWAKTNLNFNPDLKSQCHVIQLSLGSDLPRAAKKILDSLIKTYPSNLFL 151
Query: 309 NSLSRASQQKS 277
++ +A + KS
Sbjct: 152 ETMVQACRGKS 162
>gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 578
Score = 73.6 bits (179), Expect(2) = 3e-25
Identities = 40/125 (32%), Positives = 70/125 (56%)
Frame = -1
Query: 651 SHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDDLVRRVLSMTRSHPDL 472
S WRA +K L +Q++S+LL R +W LR+ L L + L ++L T+ HP +
Sbjct: 26 SSDWRAQIKQSQLVSQVSSILLQRHNWASLLRT--LNLRSKLTPVLFLQILHKTQHHPQI 83
Query: 471 SLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHPHVVVNSLSRA 292
SL FFNW ++ LG++PDL S I ++ + L ++ ++ S+ +V +S+ +A
Sbjct: 84 SLTFFNWVKTHLGFKPDLKSQCHIIQIVIGSDLCRCVEPAVNSLIQSHPAPIVADSMIQA 143
Query: 291 SQQKS 277
+ K+
Sbjct: 144 CKGKN 148
Score = 68.6 bits (166), Expect(2) = 3e-25
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = -3
Query: 247 SCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLLCREGKLEKAVLL 68
+CN LLDAL G+ V++AW A LR G PD +WSL++++LC+ GKL K V L
Sbjct: 188 ACNELLDALQR----GNEVKLAWGFLGAMLRVGIEPDQFSWSLVAQILCKNGKLGKVVGL 243
Query: 67 LVVGGCKDSAYDLVIDCFCRKG 2
L G YDLVID + + G
Sbjct: 244 LEKGIYNSEIYDLVIDFYSKSG 265
>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222848569|gb|EEE86116.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 564
Score = 72.4 bits (176), Expect(2) = 3e-24
Identities = 39/125 (31%), Positives = 72/125 (57%)
Frame = -1
Query: 651 SHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDDLVRRVLSMTRSHPDL 472
S +WR ++ L QI+S+LL R +W+ L++ +L + L ++L T+++P +
Sbjct: 11 SMKWRIQIRQNQLVFQISSILLQRHNWVSLLQNFNLST--KLTPPLFNQILHKTQTNPQI 68
Query: 471 SLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHPHVVVNSLSRA 292
SL FFNW Q++L +PDL S I V++GL R ++D ++ ++H V+ ++ +
Sbjct: 69 SLRFFNWVQTNLKLKPDLKSQCHIINICVNSGLTLPVRPIMDSLVKTHHVSVLGEAMVDS 128
Query: 291 SQQKS 277
+ KS
Sbjct: 129 CRGKS 133
Score = 66.2 bits (160), Expect(2) = 3e-24
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = -3
Query: 247 SCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLLCREGKLEKAVLL 68
+CN++LD L + +++AW Y A +++G +PD TWSL++++LC++G E+ V
Sbjct: 173 ACNSVLDVLQRENE----IKLAWCFYCAMIKDGVLPDKLTWSLIAQILCKDGNFERIVKF 228
Query: 67 LVVGGCKDSAYDLVIDCFCRKG 2
L +G Y+ VIDC ++G
Sbjct: 229 LDMGVYNSVLYNGVIDCCSKRG 250
>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
gi|557114982|gb|ESQ55265.1| hypothetical protein
EUTSA_v10024760mg [Eutrema salsugineum]
Length = 584
Score = 75.5 bits (184), Expect(2) = 1e-21
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Frame = -1
Query: 690 RRCVSAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDD-L 514
R SA ST S W+ + LA +I+S+LL R+DWI L+ LP + +
Sbjct: 13 RFSTSATPSTSSASD-WKTQVSLFRLATEISSILLQRRDWITHLKHVKSKLPRSTLTPPI 71
Query: 513 VRRVLSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLL 334
R+L TR P +L+FF+WA++ L + PDL S + + GLL+RA + P++
Sbjct: 72 FLRILRETRKSPKTTLDFFDWAKTHLRFEPDLKSCCRVIQVATETGLLERAEAFVRPLIE 131
Query: 333 SYHPHVVVNSLSR 295
++ V+V S+ R
Sbjct: 132 THSVCVIVGSMHR 144
Score = 54.3 bits (129), Expect(2) = 1e-21
Identities = 30/89 (33%), Positives = 48/89 (53%)
Frame = -3
Query: 268 RCQITTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLLCREGK 89
R + R+ N+LLD+L V R+A Y+A +RN V D TW L++++LC +GK
Sbjct: 183 RLSPSLRAYNSLLDSL----VKEKQFRLALCLYSAMVRNRVVSDGLTWDLVAQVLCEQGK 238
Query: 88 LEKAVLLLVVGGCKDSAYDLVIDCFCRKG 2
+ V L+ G Y +++C+ R G
Sbjct: 239 FKSVVKLMETGVESCKIYTNLVECYSRNG 267
>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Citrus sinensis]
Length = 538
Score = 64.3 bits (155), Expect(2) = 3e-21
Identities = 36/88 (40%), Positives = 54/88 (61%)
Frame = -3
Query: 265 CQITTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLLCREGKL 86
C+++ +CNALLDAL + +R+A Y A +R+G P+ TWSL++++LCR GK
Sbjct: 143 CEVS--ACNALLDALYRQNE----IRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKF 196
Query: 85 EKAVLLLVVGGCKDSAYDLVIDCFCRKG 2
E + LL G Y+LVID + +KG
Sbjct: 197 EVVLGLLDSGIYSSVMYNLVIDFYSKKG 224
Score = 63.9 bits (154), Expect(2) = 3e-21
Identities = 37/122 (30%), Positives = 65/122 (53%)
Frame = -1
Query: 651 SHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDDLVRRVLSMTRSHPDL 472
S WR +K L QI+S LL R +W L++ L L + L ++L T+ +P +
Sbjct: 25 SINWRTQIKRTQLVHQISSTLLQRHNWPSLLQN--LHLSSKLTPSLFLQILHKTKHNPQV 82
Query: 471 SLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHPHVVVNSLSRA 292
SL FF W ++ L + PDL S I L+ +G +R + LD ++ ++ V+ +S+ ++
Sbjct: 83 SLNFFYWIKTSLHFEPDLISQCHIIRLLLGSGQTERIKPSLDSLIQTHTATVLTHSMIQS 142
Query: 291 SQ 286
+
Sbjct: 143 CE 144
>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
gi|482553811|gb|EOA18004.1| hypothetical protein
CARUB_v10006439mg [Capsella rubella]
Length = 585
Score = 69.7 bits (169), Expect(2) = 2e-19
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Frame = -1
Query: 690 RRCVSAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDDLV 511
R SA ST S W+ L +A +I+S+LL R++WI L+ LP + V
Sbjct: 13 RFSTSATPSTSSASD-WKTQLNLSRVATEISSILLQRRNWITHLQYVKSKLPKSTLTPPV 71
Query: 510 -RRVLSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLL 334
++L TR P ++L+FF++AQ+ L + PD+ S + ++GLL+RA LL P++
Sbjct: 72 FLQILRETRKCPKITLDFFDFAQTHLHFDPDVKSQCRVIEVATESGLLERAETLLRPLVE 131
Query: 333 SYHPHVVVNSLSRASQQKS*LS 268
+ +VV SL + + + LS
Sbjct: 132 TNSVSLVVGSLQKCCEGEVSLS 153
Score = 52.4 bits (124), Expect(2) = 2e-19
Identities = 28/89 (31%), Positives = 48/89 (53%)
Frame = -3
Query: 268 RCQITTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLLCREGK 89
R + R+ N+LLD+L + R+A Y+A +RN V D TW L++++LC +G+
Sbjct: 183 RLSPSLRAYNSLLDSL----IKEGQFRVALCLYSAMVRNQVVSDGFTWDLVAQILCEQGR 238
Query: 88 LEKAVLLLVVGGCKDSAYDLVIDCFCRKG 2
+ V L+ G Y +++C+ R G
Sbjct: 239 SKSVVKLMETGVESCKIYTNLVECYSRNG 267
>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
Length = 585
Score = 63.5 bits (153), Expect(2) = 3e-17
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Frame = -1
Query: 690 RRCVSAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDDLV 511
R SA ST S W+ +A +I+S+LL R++WI L+ LP + V
Sbjct: 13 RFSTSATPSTSSASD-WKTQQTLFRVATEISSILLQRRNWITHLQYVKSKLPRSTLTSPV 71
Query: 510 -RRVLSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLL 334
++L TR P +L+FF++A++ L + PDL S + ++GLL+RA LL P++
Sbjct: 72 FLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVE 131
Query: 333 SYHPHVVVNSLSR 295
+ +VV + R
Sbjct: 132 TNSVSLVVGEMHR 144
Score = 51.2 bits (121), Expect(2) = 3e-17
Identities = 25/94 (26%), Positives = 48/94 (51%)
Frame = -3
Query: 283 KIVAFRCQITTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLL 104
++ F ++ + ++L S V + R+A Y+A +RNG V D TW L++++L
Sbjct: 174 EVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQIL 233
Query: 103 CREGKLEKAVLLLVVGGCKDSAYDLVIDCFCRKG 2
C +G+ + L+ G Y +++C+ R G
Sbjct: 234 CEQGRSKSVFKLMETGVESCKIYTNLVECYSRNG 267
>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659015|gb|AEE84415.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 63.5 bits (153), Expect(2) = 3e-17
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Frame = -1
Query: 690 RRCVSAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDDLV 511
R SA ST S W+ +A +I+S+LL R++WI L+ LP + V
Sbjct: 13 RFSTSATPSTSSASD-WKTQQTLFRVATEISSILLQRRNWITHLQYVKSKLPRSTLTSPV 71
Query: 510 -RRVLSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLL 334
++L TR P +L+FF++A++ L + PDL S + ++GLL+RA LL P++
Sbjct: 72 FLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVE 131
Query: 333 SYHPHVVVNSLSR 295
+ +VV + R
Sbjct: 132 TNSVSLVVGEMHR 144
Score = 51.2 bits (121), Expect(2) = 3e-17
Identities = 25/94 (26%), Positives = 48/94 (51%)
Frame = -3
Query: 283 KIVAFRCQITTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLL 104
++ F ++ + ++L S V + R+A Y+A +RNG V D TW L++++L
Sbjct: 174 EVFGFMRRLRLSPSQSAYNSLLGSLVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQIL 233
Query: 103 CREGKLEKAVLLLVVGGCKDSAYDLVIDCFCRKG 2
C +G+ + L+ G Y +++C+ R G
Sbjct: 234 CEQGRSKSVFKLMETGVESCKIYTNLVECYSRNG 267
>gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
Length = 584
Score = 75.9 bits (185), Expect = 1e-11
Identities = 46/122 (37%), Positives = 72/122 (59%)
Frame = -1
Query: 687 RCVSAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDDLVR 508
R + A+ST S WR ++K LA+QI+ LL R++W+ LR+ SLF + L
Sbjct: 5 RASNKAYSTAS-SLSWRTNIKQAQLASQISYALLQRRNWVPLLRNLSLF--PKLTPALFL 61
Query: 507 RVLSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSY 328
++L T+++P +SLEFFNWA+ +L + PDL S I + +GL+ + +LD L+
Sbjct: 62 QILHKTQNNPQVSLEFFNWAKVNLRFEPDLKSNCQIIRVSLGSGLVRPVKPILDS-LIQT 120
Query: 327 HP 322
HP
Sbjct: 121 HP 122
Score = 65.9 bits (159), Expect = 1e-08
Identities = 32/94 (34%), Positives = 55/94 (58%)
Frame = -3
Query: 283 KIVAFRCQITTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLL 104
K+ C + +CNALL+A+ + +R+AW Y +RNG +PD TWSL++++L
Sbjct: 166 KMNVLGCVPSVVACNALLNAIQRENE----IRLAWCFYGLMIRNGVLPDRFTWSLVAQIL 221
Query: 103 CREGKLEKAVLLLVVGGCKDSAYDLVIDCFCRKG 2
C++GK E+ + LL + Y+L++D + G
Sbjct: 222 CKDGKFERILRLLDLNIYNSMMYNLLVDGCSKSG 255
>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like [Solanum lycopersicum]
Length = 584
Score = 69.7 bits (169), Expect = 8e-10
Identities = 31/86 (36%), Positives = 52/86 (60%)
Frame = -3
Query: 259 ITTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLLCREGKLEK 80
++ CN LL+ L S + +R+ W Y + +RNG + TWSL++++LC++GK EK
Sbjct: 190 VSVNCCNTLLNLLLSKN----DLRLGWCYYGSIIRNGVQENVVTWSLIAQMLCKDGKFEK 245
Query: 79 AVLLLVVGGCKDSAYDLVIDCFCRKG 2
V +L G C Y+++IDC+ +G
Sbjct: 246 IVAILDKGVCSPLIYNILIDCYSERG 271
Score = 67.8 bits (164), Expect = 3e-09
Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Frame = -1
Query: 678 SAAFSTLPISHRWRADLKNRSLAAQITSLLLHRK--DWIRRLRSKSLFLPGRSCDDLVRR 505
++ +T S WR K L +QI+S+LL R+ W L++ L + L +
Sbjct: 18 ASTVTTTQKSQDWRTQFKQTQLVSQISSILLQRQTNQWPLLLKNLKL-CSSQFTPSLFLQ 76
Query: 504 VLSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYH 325
+L T+ +P +SL FF++A+++LG++PD L + + L+ +GL A+ +LD ++ +Y
Sbjct: 77 ILHNTQDNPQVSLRFFHYAKNNLGFQPDAKVLCTLVYILLGSGLSRPAKPILDTLIQTYP 136
Query: 324 PHVVVNSL 301
P +V L
Sbjct: 137 PAQIVGFL 144
>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21170-like isoform X1 [Solanum tuberosum]
gi|565362693|ref|XP_006348080.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X2 [Solanum tuberosum]
gi|565362695|ref|XP_006348081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21170-like isoform X3 [Solanum tuberosum]
Length = 584
Score = 68.2 bits (165), Expect = 2e-09
Identities = 38/129 (29%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Frame = -1
Query: 681 VSAAFSTLPISHRWRADLKNRSLAAQITSLLLHRK--DWIRRLRSKSLFLPGRSCDDLVR 508
+++ +T WR K L +QI+S+LL R+ W L++ L + L
Sbjct: 17 IASTVTTTQKPQSWRIQFKQTQLVSQISSILLQRQTNQWPSLLKNLKL-CSSQFTPSLFL 75
Query: 507 RVLSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSY 328
++L T+++P +SL FF++A+++LG++PD L + + L+ +GL A+ +LD ++ +Y
Sbjct: 76 QILHNTQTNPQVSLRFFDYAKNNLGFQPDAKVLCTLVYILLGSGLSKPAKPILDTLIQTY 135
Query: 327 HPHVVVNSL 301
P +V L
Sbjct: 136 PPAQIVGFL 144
Score = 65.5 bits (158), Expect = 2e-08
Identities = 29/86 (33%), Positives = 52/86 (60%)
Frame = -3
Query: 259 ITTRSCNALLDALSSSDVDGDGVRIAWRCYAAALRNGAVPDSRTWSLLSRLLCREGKLEK 80
++ CN LL+ L S + +R+ W + + +RNG + TWSL++++LC++GK E+
Sbjct: 190 VSVNCCNTLLNLLLSKNE----LRLGWCYFGSIIRNGVQENVVTWSLIAQMLCKDGKFEQ 245
Query: 79 AVLLLVVGGCKDSAYDLVIDCFCRKG 2
V +L G C Y+++IDC+ +G
Sbjct: 246 IVPILDKGVCSPVMYNILIDCYSERG 271
>gb|AFV70836.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 67.4 bits (163), Expect = 4e-09
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Frame = -1
Query: 678 SAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDD-LVRRV 502
SA ST S+ W++ LA +I+S+LL R++WI L+ LP + + ++
Sbjct: 4 SATPSTSSASN-WKSQQTLFRLATEISSILLQRRNWITHLQYVKSKLPRSTLTSPIFLQI 62
Query: 501 LSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHP 322
L TR P +L+FF++A++ L + PDL S + ++GLL+RA LL P++ ++
Sbjct: 63 LRETRKCPKTTLDFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSV 122
Query: 321 HVVVNSLSR 295
+VV S+ R
Sbjct: 123 SLVVGSMHR 131
>gb|AFV70831.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 66.6 bits (161), Expect = 7e-09
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = -1
Query: 678 SAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRS-KSLFLPGRSCDDLVRRV 502
SA ST S+ W++ LA +I+S+LL R++WI L+ KS + ++
Sbjct: 4 SATPSTSSASN-WKSQKTLFRLATEISSILLQRRNWITHLQYVKSKLSRSTLTSPIFLQI 62
Query: 501 LSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHP 322
L TR P +L+FF++A++ L + PDL S + ++GLL+RA LL P++ ++
Sbjct: 63 LRETRKCPKTTLDFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSV 122
Query: 321 HVVVNSLSR 295
+VV S+ R
Sbjct: 123 SLVVGSMHR 131
>gb|AFV70830.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 66.6 bits (161), Expect = 7e-09
Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Frame = -1
Query: 678 SAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRS-KSLFLPGRSCDDLVRRV 502
SA ST S+ W++ LA +I+S+LL R++WI L+ KS + ++
Sbjct: 4 SATPSTSSASN-WKSQKTLFRLATEISSILLQRRNWITHLQYVKSKLSRSTLTSPIFLQI 62
Query: 501 LSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHP 322
L TR P +L+FF++A++ L + PDL S + ++GLL+RA LL P++ ++
Sbjct: 63 LRETRKCPKTTLDFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSV 122
Query: 321 HVVVNSLSR 295
+VV S+ R
Sbjct: 123 SLVVGSMHR 131
>gb|AFV70818.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 66.6 bits (161), Expect = 7e-09
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -1
Query: 642 WRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDD-LVRRVLSMTRSHPDLSL 466
W+ LA +I+S+LL R++WI L+ LP + + ++L TR P +L
Sbjct: 15 WKTQQTLFRLATEISSILLQRRNWITHLQYVKSKLPRSTLTSPIFLQILRETRKCPKTTL 74
Query: 465 EFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHPHVVVNSLSR 295
+FF++A++ L + PDL S + ++GLL+RA LL P++ ++ +VV S+ R
Sbjct: 75 DFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSXSLVVGSMHR 131
>ref|XP_002867861.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313697|gb|EFH44120.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 66.6 bits (161), Expect = 7e-09
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Frame = -1
Query: 690 RRCVSAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDD-L 514
R SA ST S W+ LA +I+S+LL R++WI L+ LP + +
Sbjct: 13 RFSTSATPSTSSASD-WKTQQTLFRLATEISSILLQRRNWISHLQYVKSKLPRSTLTSPI 71
Query: 513 VRRVLSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLL 334
+++ TR P +L+FF++A++ L + PDL S + ++GLL+RA LL P++
Sbjct: 72 FLQIIRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVATESGLLERAETLLRPLVE 131
Query: 333 SYHPHVVVNSLSR 295
++ +VV S+ R
Sbjct: 132 THSVSLVVGSMHR 144
>gb|AFV70842.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 66.2 bits (160), Expect = 9e-09
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -1
Query: 642 WRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDD-LVRRVLSMTRSHPDLSL 466
W+ LA +I+S+LL R++WI L+ LP + + ++L TR P +L
Sbjct: 15 WKTQQTLFRLATEISSILLQRRNWITHLQYVKSKLPRSTLTSPIFLQILRETRKCPKTTL 74
Query: 465 EFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHPHVVVNSLSR 295
+FF++A++ L + PDL S + ++GLL+RA LL P++ ++ +VV S+ R
Sbjct: 75 DFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSVSLVVGSMHR 131
>gb|AFV70829.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri] gi|410515498|gb|AFV70838.1|
tetratricopeptide repeat-like superfamily protein,
partial [Arabidopsis halleri]
gi|410515500|gb|AFV70839.1| tetratricopeptide
repeat-like superfamily protein, partial [Arabidopsis
halleri] gi|410515502|gb|AFV70840.1| tetratricopeptide
repeat-like superfamily protein, partial [Arabidopsis
halleri] gi|410515504|gb|AFV70841.1| tetratricopeptide
repeat-like superfamily protein, partial [Arabidopsis
halleri]
Length = 186
Score = 66.2 bits (160), Expect = 9e-09
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -1
Query: 642 WRADLKNRSLAAQITSLLLHRKDWIRRLRSKSLFLPGRSCDD-LVRRVLSMTRSHPDLSL 466
W+ LA +I+S+LL R++WI L+ LP + + ++L TR P +L
Sbjct: 15 WKTQQTLFRLATEISSILLQRRNWITHLQYVKSKLPRSTLTSPIFLQILRETRKCPKTTL 74
Query: 465 EFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHPHVVVNSLSR 295
+FF++A++ L + PDL S + ++GLL+RA LL P++ ++ +VV S+ R
Sbjct: 75 DFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSVSLVVGSMHR 131
>gb|AFV70822.1| tetratricopeptide repeat-like superfamily protein, partial
[Arabidopsis halleri]
Length = 186
Score = 66.2 bits (160), Expect = 9e-09
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = -1
Query: 678 SAAFSTLPISHRWRADLKNRSLAAQITSLLLHRKDWIRRLRS-KSLFLPGRSCDDLVRRV 502
SA ST S+ W+ LA +I+S+LL R++WI L+ KS + ++
Sbjct: 4 SATPSTSSASN-WKTQQTLFRLATEISSILLQRRNWITHLQYVKSKLSRSTLTSPIFLQI 62
Query: 501 LSMTRSHPDLSLEFFNWAQSDLGYRPDLHSLAAIAWTLVDAGLLDRARWLLDPVLLSYHP 322
L TR P +L+FF++A++ L + PDL S + ++GLL+RA LL P++ ++
Sbjct: 63 LRETRKCPKTTLDFFDFAKTHLRFDPDLKSHCRVIEVATESGLLERAETLLRPLVETHSV 122
Query: 321 HVVVNSLSR 295
+VV S+ R
Sbjct: 123 SLVVGSMHR 131