BLASTX nr result
ID: Zingiber25_contig00011865
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00011865
(517 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Seta... 76 5e-12
ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Ory... 75 1e-11
ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Ory... 75 1e-11
ref|XP_006829218.1| hypothetical protein AMTR_s00001p00272270 [A... 75 1e-11
dbj|BAD97866.1| LHY homologue1 [Lemna paucicostata] 74 2e-11
gb|AFW57284.1| LHY protein [Zea mays] 74 3e-11
gb|AFW57283.1| hypothetical protein ZEAMMB73_923031 [Zea mays] 74 3e-11
dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group] 73 3e-11
gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indi... 73 3e-11
ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group] g... 73 3e-11
gb|AAR20887.1| circadian oscillator component [Oryza sativa Japo... 73 3e-11
ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26... 73 5e-11
gb|AFW61192.1| putative MYB DNA-binding domain superfamily prote... 72 6e-11
gb|ADU60099.1| circadian clock associated protein 1 [Zea mays] 72 6e-11
ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27... 72 6e-11
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa] 72 8e-11
ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium di... 72 8e-11
gb|EXC13655.1| Protein LHY [Morus notabilis] 71 1e-10
ref|XP_004306608.1| PREDICTED: protein CCA1-like [Fragaria vesca... 71 1e-10
gb|AEW48245.1| circadian clock associated 1 [Hordeum vulgare sub... 71 1e-10
>ref|XP_004972798.1| PREDICTED: protein LHY-like isoform X1 [Setaria italica]
gi|514793380|ref|XP_004972799.1| PREDICTED: protein
LHY-like isoform X2 [Setaria italica]
Length = 747
Score = 75.9 bits (185), Expect = 5e-12
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ 457
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRK+ L S P E+ N K S+
Sbjct: 98 KLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKNGLSSETPTKELPNDKSSK 153
>ref|XP_006659144.1| PREDICTED: protein CCA1-like isoform X8 [Oryza brachyantha]
gi|573953750|ref|XP_006659145.1| PREDICTED: protein
CCA1-like isoform X9 [Oryza brachyantha]
Length = 718
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ 457
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRKSSL + EV N K ++
Sbjct: 71 KLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSSLSCETSIREVPNDKATK 126
>ref|XP_006659137.1| PREDICTED: protein CCA1-like isoform X1 [Oryza brachyantha]
gi|573953736|ref|XP_006659138.1| PREDICTED: protein
CCA1-like isoform X2 [Oryza brachyantha]
gi|573953738|ref|XP_006659139.1| PREDICTED: protein
CCA1-like isoform X3 [Oryza brachyantha]
gi|573953740|ref|XP_006659140.1| PREDICTED: protein
CCA1-like isoform X4 [Oryza brachyantha]
gi|573953742|ref|XP_006659141.1| PREDICTED: protein
CCA1-like isoform X5 [Oryza brachyantha]
gi|573953744|ref|XP_006659142.1| PREDICTED: protein
CCA1-like isoform X6 [Oryza brachyantha]
gi|573953746|ref|XP_006659143.1| PREDICTED: protein
CCA1-like isoform X7 [Oryza brachyantha]
Length = 724
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ 457
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRKSSL + EV N K ++
Sbjct: 71 KLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSSLSCETSIREVPNDKATK 126
>ref|XP_006829218.1| hypothetical protein AMTR_s00001p00272270 [Amborella trichopoda]
gi|548834197|gb|ERM96634.1| hypothetical protein
AMTR_s00001p00272270 [Amborella trichopoda]
Length = 811
Score = 74.7 bits (182), Expect = 1e-11
Identities = 31/46 (67%), Positives = 41/46 (89%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPL 427
+LE+EA+ KG+P G++HDIDIP PRPK+KPSNPYPRK+ +GS+ PL
Sbjct: 71 KLEREAVIKGLPVGKAHDIDIPPPRPKKKPSNPYPRKTGIGSVGPL 116
>dbj|BAD97866.1| LHY homologue1 [Lemna paucicostata]
Length = 534
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLG 430
+LEKEA+ KGVP GQ HDIDIP PRPKRKP+NPYPRK +G P G
Sbjct: 71 KLEKEAVSKGVPLGQVHDIDIPPPRPKRKPNNPYPRKLGVGPTCPSG 117
>gb|AFW57284.1| LHY protein [Zea mays]
Length = 689
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +2
Query: 284 QLQLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ-* 460
Q +LEKEA+ G PGQ+HDIDIP PRPKRK ++PYPRKS L S P E+ + K ++
Sbjct: 40 QGELEKEAINNGTSPGQAHDIDIPPPRPKRKANSPYPRKSGLSSETPTKELPSDKSTKPN 99
Query: 461 MSLYGESIVM 490
M L E+++M
Sbjct: 100 MPLSNENVLM 109
>gb|AFW57283.1| hypothetical protein ZEAMMB73_923031 [Zea mays]
Length = 589
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Frame = +2
Query: 284 QLQLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ-* 460
Q +LEKEA+ G PGQ+HDIDIP PRPKRK ++PYPRKS L S P E+ + K ++
Sbjct: 40 QGELEKEAINNGTSPGQAHDIDIPPPRPKRKANSPYPRKSGLSSETPTKELPSDKSTKPN 99
Query: 461 MSLYGESIVM 490
M L E+++M
Sbjct: 100 MPLSNENVLM 109
>dbj|BAC99516.1| putative LHY protein [Oryza sativa Japonica Group]
Length = 725
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGK 448
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRKS L S EV N K
Sbjct: 71 KLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQNDK 123
>gb|EEC82927.1| hypothetical protein OsI_27882 [Oryza sativa Indica Group]
Length = 719
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGK 448
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRKS L S EV N K
Sbjct: 71 KLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQNDK 123
>ref|NP_001061032.1| Os08g0157600 [Oryza sativa Japonica Group]
gi|113623001|dbj|BAF22946.1| Os08g0157600 [Oryza sativa
Japonica Group] gi|222639944|gb|EEE68076.1| hypothetical
protein OsJ_26106 [Oryza sativa Japonica Group]
Length = 719
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGK 448
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRKS L S EV N K
Sbjct: 71 KLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQNDK 123
>gb|AAR20887.1| circadian oscillator component [Oryza sativa Japonica Group]
Length = 603
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/53 (64%), Positives = 39/53 (73%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGK 448
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRKS L S EV N K
Sbjct: 71 KLEKEAINNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETSTREVQNDK 123
>ref|NP_001131529.2| LHY protein [Zea mays] gi|195609712|gb|ACG26686.1| LHY protein [Zea
mays]
Length = 718
Score = 72.8 bits (177), Expect = 5e-11
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ-*MS 466
+LEKEA+ G PGQ+HDIDIP PRPKRK ++PYPRKS L S P E+ + K ++ M
Sbjct: 71 KLEKEAINNGTSPGQAHDIDIPPPRPKRKANSPYPRKSGLSSETPTKELPSDKSTKPNMP 130
Query: 467 LYGESIVM 490
L E+++M
Sbjct: 131 LSNENVLM 138
>gb|AFW61192.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
Length = 720
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ 457
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRKS L S E+ N K ++
Sbjct: 71 KLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETQTKELPNDKSTK 126
>gb|ADU60099.1| circadian clock associated protein 1 [Zea mays]
Length = 720
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ 457
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRKS L S E+ N K ++
Sbjct: 71 KLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETQTKELPNDKSTK 126
>ref|NP_001147482.1| LHY protein [Zea mays] gi|195611664|gb|ACG27662.1| LHY protein [Zea
mays]
Length = 720
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ 457
+LEKEA+ G PGQ+HDIDIP PRPKRKP++PYPRKS L S E+ N K ++
Sbjct: 71 KLEKEAMNNGTSPGQAHDIDIPPPRPKRKPNSPYPRKSCLSSETQTKELPNDKSTK 126
>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
Length = 768
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLG 412
+LEKEAL KGVP GQ+ DIDIP PRPKRKPSNPYPRK+S+G
Sbjct: 71 KLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTSIG 111
>ref|XP_003573469.1| PREDICTED: protein LHY-like [Brachypodium distachyon]
Length = 716
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ 457
+LEKEA+ G PG++HDIDIP PRPKRKP+ PYPRK L S AP E N K ++
Sbjct: 71 KLEKEAINNGTSPGEAHDIDIPPPRPKRKPNCPYPRKGCLSSDAPTREAPNDKSTK 126
>gb|EXC13655.1| Protein LHY [Morus notabilis]
Length = 911
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +2
Query: 293 LEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGS 415
LEKEAL KGVP GQ+ DIDIP PRPKRKPSNPYPRK+S G+
Sbjct: 234 LEKEALVKGVPVGQAIDIDIPPPRPKRKPSNPYPRKTSAGT 274
>ref|XP_004306608.1| PREDICTED: protein CCA1-like [Fragaria vesca subsp. vesca]
Length = 778
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSS 406
+LEKEA+ KGVP GQS DIDIP PRPKRKPSNPYPRKSS
Sbjct: 71 KLEKEAVSKGVPVGQSIDIDIPPPRPKRKPSNPYPRKSS 109
>gb|AEW48245.1| circadian clock associated 1 [Hordeum vulgare subsp. vulgare]
Length = 717
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/68 (54%), Positives = 43/68 (63%)
Frame = +2
Query: 290 QLEKEALEKGVPPGQSHDIDIPAPRPKRKPSNPYPRKSSLGSLAPLGEVINGKPSQ*MSL 469
+LEKEA+ G PGQ+HDIDIP PRPKRKP+ PYPRK L S P EV P +SL
Sbjct: 71 KLEKEAINNGTSPGQAHDIDIPPPRPKRKPNCPYPRKGCLSSETPTREV----PKSSVSL 126
Query: 470 YGESIVME 493
+ ME
Sbjct: 127 SNSNSQME 134