BLASTX nr result

ID: Zingiber25_contig00011487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00011487
         (884 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS51607.1| E3 ubiquitin ligase BIG BROTHER [Triticum urartu]       66   2e-08
ref|NP_001053604.1| Os04g0571200 [Oryza sativa Japonica Group] g...    65   4e-08
dbj|BAG92476.1| unnamed protein product [Oryza sativa Japonica G...    64   6e-08
emb|CAD41576.3| OSJNBa0088I22.8 [Oryza sativa Japonica Group] gi...    64   6e-08
dbj|BAK01921.1| predicted protein [Hordeum vulgare subsp. vulgare]     64   7e-08
gb|EMT14836.1| RING finger protein 44 [Aegilops tauschii]              64   1e-07
gb|EAY95219.1| hypothetical protein OsI_17037 [Oryza sativa Indi...    64   1e-07
emb|CAH67282.1| OSIGBa0111L12.9 [Oryza sativa Indica Group]            64   1e-07
ref|XP_006652662.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-...    62   4e-07
ref|XP_003580354.1| PREDICTED: uncharacterized protein LOC100831...    60   8e-07

>gb|EMS51607.1| E3 ubiquitin ligase BIG BROTHER [Triticum urartu]
          Length = 287

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
 Frame = -2

Query: 433 TQEKQEVTVYDTGTHVVKILEDHMEGAYYLDEIAV------QASVYQSFQENSGNRYRPN 272
           T  K+E  VY   T +   +E++  G ++ D++ +      Q  VYQ  Q N G+     
Sbjct: 17  TTGKKEAVVYYMDTPLPYAIEENFGGCFFEDDVDLAQVLQDQEIVYQLIQGNDGSGSSRT 76

Query: 271 HEIGQSS----------QRTRGESNLQSASAYDEVLAQQCQLLEDCSADALESTINHPGD 122
           H    SS          + TRG +N +S  A DE LA+  Q +ED  A A         +
Sbjct: 77  HSDPSSSCGHPRKSSGRRLTRG-ANYESQLAVDEALARDLQAMEDQIARATIDDKKRK-E 134

Query: 121 GVNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
           G     SST N G++S      V+ ED +D D+M+YE+LQ
Sbjct: 135 GRKPVSSSTSNNGNTSVSRSSQVLTEDGVDPDNMTYEELQ 174


>ref|NP_001053604.1| Os04g0571200 [Oryza sativa Japonica Group]
           gi|113565175|dbj|BAF15518.1| Os04g0571200, partial
           [Oryza sativa Japonica Group]
          Length = 290

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
 Frame = -2

Query: 478 RDSLR*TVNMVEELATQEKQEVTVYDTGTHVVKILEDHMEGAYYLDEIAV------QASV 317
           RD     V+M     T  K+EV V      +  ++E++  G ++ D++ +      Q  V
Sbjct: 28  RDPRASEVSMEVMHDTTGKKEVVVCYMNAPLPYMIEENYGGCFFEDDVDLAQVLQDQEIV 87

Query: 316 YQSFQENSGNRYRPNHEIGQSS---------QRTRGESNLQSASAYDEVLAQQCQLLEDC 164
           YQ  Q N G      H    SS         ++  G ++ ++    DE LA++ Q +ED 
Sbjct: 88  YQLIQGNYGTGSSKTHSNPSSSYSHGCELGERKPSGVASYEAQLVVDEALARELQQMEDQ 147

Query: 163 SADALESTINHPGDGVNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
            A A     N    G     SST + G++S   P  V+ ED ID D+M+YE+LQ
Sbjct: 148 LASASIDDHNIIEHGRKPIASSTSSGGNASASRPPQVVMEDGIDPDNMTYEELQ 201


>dbj|BAG92476.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 254

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
 Frame = -2

Query: 433 TQEKQEVTVYDTGTHVVKILEDHMEGAYYLDEIAV------QASVYQSFQENSGNRYRPN 272
           T  K+EV V      +  ++E++  G ++ D++ +      Q  VYQ  Q N G      
Sbjct: 7   TTGKKEVVVCYMNAPLPYMIEENYGGCFFEDDVDLAQVLQDQEIVYQLIQGNYGTGSSKT 66

Query: 271 HEIGQSS---------QRTRGESNLQSASAYDEVLAQQCQLLEDCSADALESTINHPGDG 119
           H    SS         ++  G ++ ++    DE LA++ Q +ED  A A     N    G
Sbjct: 67  HSNPSSSYSHGCELGERKPSGVASYEAQLVVDEALARELQQMEDQLASASIDDHNIIEHG 126

Query: 118 VNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
                SST + G++S   P  V+ ED ID D+M+YE+LQ
Sbjct: 127 RKPIASSTSSGGNASASRPPQVVMEDGIDPDNMTYEELQ 165


>emb|CAD41576.3| OSJNBa0088I22.8 [Oryza sativa Japonica Group]
           gi|125591338|gb|EAZ31688.1| hypothetical protein
           OsJ_15836 [Oryza sativa Japonica Group]
          Length = 298

 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
 Frame = -2

Query: 433 TQEKQEVTVYDTGTHVVKILEDHMEGAYYLDEIAV------QASVYQSFQENSGNRYRPN 272
           T  K+EV V      +  ++E++  G ++ D++ +      Q  VYQ  Q N G      
Sbjct: 51  TTGKKEVVVCYMNAPLPYMIEENYGGCFFEDDVDLAQVLQDQEIVYQLIQGNYGTGSSKT 110

Query: 271 HEIGQSS---------QRTRGESNLQSASAYDEVLAQQCQLLEDCSADALESTINHPGDG 119
           H    SS         ++  G ++ ++    DE LA++ Q +ED  A A     N    G
Sbjct: 111 HSNPSSSYSHGCELGERKPSGVASYEAQLVVDEALARELQQMEDQLASASIDDHNIIEHG 170

Query: 118 VNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
                SST + G++S   P  V+ ED ID D+M+YE+LQ
Sbjct: 171 RKPIASSTSSGGNASASRPPQVVMEDGIDPDNMTYEELQ 209


>dbj|BAK01921.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 253

 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 16/160 (10%)
 Frame = -2

Query: 433 TQEKQEVTVYDTGTHVVKILEDHMEGAYYLDEIAV------QASVYQSFQENSGNRYRPN 272
           T  K+E  VY     +   +E++  G ++ D++ +      Q  VYQ  Q N G+    +
Sbjct: 9   TTGKKEAAVYYMDAPLPYAIEENFGGCFFEDDVDLAQVLQDQEIVYQLIQGNDGSGSSRS 68

Query: 271 HEIGQSS----------QRTRGESNLQSASAYDEVLAQQCQLLEDCSADALESTINHPGD 122
           H    SS            TRG +N +S  A DE LA+  Q +ED  A A     N+  +
Sbjct: 69  HSDPSSSCGHPRKSGGRSLTRG-ANYESQLAVDEALARDLQAMEDQIAKAAIEE-NNRKE 126

Query: 121 GVNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
           G      ST N G++S      V+ ED +D D+M+YE+LQ
Sbjct: 127 GRKPAGFSTSNNGNTSVSRSSQVLTEDGVDPDNMTYEELQ 166


>gb|EMT14836.1| RING finger protein 44 [Aegilops tauschii]
          Length = 251

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
 Frame = -2

Query: 433 TQEKQEVTVYDTGTHVVKILEDHMEGAYYLDEIAV------QASVYQSFQENSGNRYRPN 272
           T  K+E  VY     +   +E++  G ++ D++ +      Q  VYQ  Q N G+     
Sbjct: 7   TTGKKEAVVYYMDAPLPYAIEENFGGCFFEDDVDLAQVLQDQEIVYQLIQGNDGSGLSRT 66

Query: 271 HEIGQSS----------QRTRGESNLQSASAYDEVLAQQCQLLEDCSADALESTINHPGD 122
           H    SS          + TRG +N +S  A DE LA+  Q +ED  A A         +
Sbjct: 67  HSDPGSSCGHPQKSSGRRLTRG-ANYESQLAVDEALARDLQAMEDQIARATIDDKKRK-E 124

Query: 121 GVNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
           G     SST N G++S      V+ ED +D D+M+YE+LQ
Sbjct: 125 GRKPVSSSTSNNGNTSVSRSSQVLTEDEVDPDNMTYEELQ 164


>gb|EAY95219.1| hypothetical protein OsI_17037 [Oryza sativa Indica Group]
          Length = 298

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
 Frame = -2

Query: 433 TQEKQEVTVYDTGTHVVKILEDHMEGAYYLDEIAV------QASVYQSFQENSGNRYRPN 272
           T  K+EV V      +  ++E++  G ++ D++ +      Q  VYQ  Q N G      
Sbjct: 51  TTGKKEVVVCYMNAPLPYMIEENYGGCFFEDDVDLAQVLQDQEIVYQLIQGNYGTGSSKT 110

Query: 271 HEIGQSSQ---------RTRGESNLQSASAYDEVLAQQCQLLEDCSADALESTINHPGDG 119
           H    SS          +  G ++ ++    DE LA++ Q +ED  A A     N    G
Sbjct: 111 HSNPSSSYSHGCELGEWKPSGVASYEAQLVVDEALARELQQMEDQLASASIDDHNIIEHG 170

Query: 118 VNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
                SST + G++S   P  V+ ED ID D+M+YE+LQ
Sbjct: 171 RKPIASSTSSGGNASASRPPQVVMEDGIDPDNMTYEELQ 209


>emb|CAH67282.1| OSIGBa0111L12.9 [Oryza sativa Indica Group]
          Length = 254

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 15/159 (9%)
 Frame = -2

Query: 433 TQEKQEVTVYDTGTHVVKILEDHMEGAYYLDEIAV------QASVYQSFQENSGNRYRPN 272
           T  K+EV V      +  ++E++  G ++ D++ +      Q  VYQ  Q N G      
Sbjct: 7   TTGKKEVVVCYMNAPLPYMIEENYGGCFFEDDVDLAQVLQDQEIVYQLIQGNYGTGSSKT 66

Query: 271 HEIGQSSQ---------RTRGESNLQSASAYDEVLAQQCQLLEDCSADALESTINHPGDG 119
           H    SS          +  G ++ ++    DE LA++ Q +ED  A A     N    G
Sbjct: 67  HSNPSSSYSHGCELGEWKPSGVASYEAQLVVDEALARELQQMEDQLASASIDDHNIIEHG 126

Query: 118 VNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
                SST + G++S   P  V+ ED ID D+M+YE+LQ
Sbjct: 127 RKPIASSTSSGGNASASRPPQVVMEDGIDPDNMTYEELQ 165


>ref|XP_006652662.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Oryza
           brachyantha]
          Length = 254

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
 Frame = -2

Query: 433 TQEKQEVTVYDTGTHVVKILEDHMEGAYYLDEIAV------QASVYQSFQENSGNRYRPN 272
           T  K+EV V      +  ++E++  G +  D++ +      Q  VYQ  Q N G+    +
Sbjct: 7   TTRKKEVVVCYMNAPLPYMIEENYGGCFCEDDLDLAQVLQDQEIVYQLIQRNDGSGSSRS 66

Query: 271 HEIGQSS---------QRTRGESNLQSASAYDEVLAQQCQLLEDCSADALESTINHPGDG 119
           H    SS         ++  G ++ ++    DE LA++ Q +ED  A A          G
Sbjct: 67  HSNPSSSYSHGRALNERKPSGVASYEAQLVVDEALARELQQMEDQLASASIDDHIIIEHG 126

Query: 118 VNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
                SST N G  S   P  V+ ED ID D+M+YE+LQ
Sbjct: 127 RKPIASSTSNGGGVSASRPPQVVMEDGIDPDNMTYEELQ 165


>ref|XP_003580354.1| PREDICTED: uncharacterized protein LOC100831396 [Brachypodium
           distachyon]
          Length = 252

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
 Frame = -2

Query: 433 TQEKQEVTVYDTGTHVVKILEDHMEGAYYLDE------IAVQASVYQSFQENSGN---RY 281
           T  K+E  VY     V   +E++  G ++ D+      +  Q  V++  + N G+   R 
Sbjct: 9   TTGKKEAVVYYMNAPVPYAIEENFGGCFFEDDDDLALVLQEQEIVHRLIEGNDGSGSSRT 68

Query: 280 RPNHEIGQSSQRT------RGESNLQSASAYDEVLAQQCQLLEDCSADALESTINHPGDG 119
           R +    +  QRT       G +N  S  A DE LA++ Q +ED  A+   S  ++   G
Sbjct: 69  RSDPSSSRGHQRTLDGRKLTGSANYASQLAVDEALARELQAIEDQIAET--SIDDNIFKG 126

Query: 118 VNTTESSTRNAGSSSNGNPRLVIREDNIDSDSMSYEQLQ 2
                SST N  S+S+     V  ED +D D+M+YE+LQ
Sbjct: 127 RKPASSSTSNNASTSSSRCPQVATEDGVDPDNMTYEELQ 165


Top