BLASTX nr result

ID: Zingiber25_contig00011306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00011306
         (628 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569049.1| PREDICTED: uncharacterized protein LOC100834...    63   6e-08
ref|XP_004960366.1| PREDICTED: uncharacterized protein LOC101781...    59   9e-07
gb|EMT26446.1| Nuclear receptor corepressor 1 [Aegilops tauschii]      59   1e-06
gb|AFW82754.1| putative MYB DNA-binding domain superfamily prote...    56   1e-05
ref|NP_001145928.1| uncharacterized protein LOC100279451 [Zea ma...    56   1e-05

>ref|XP_003569049.1| PREDICTED: uncharacterized protein LOC100834612 [Brachypodium
           distachyon]
          Length = 431

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 61/209 (29%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
 Frame = +1

Query: 37  DADLRTCSEKAGAEVEEH--KPGDVKLFGKILSVTTXXXXXXXXXXXXRESDRQPWLPKM 210
           +  L TCS+KA  E  +   +PGDVKLFGKILS  +            +     P + K 
Sbjct: 214 EGQLETCSQKASTESYDQVKRPGDVKLFGKILSHQSSLQSSGSSSNGIKSKPPSPNIDKS 273

Query: 211 DGALNSACQLNLETTCGFWDSKRIQTDFSSL------------PDTASMLLEFKGSPTIV 354
           +  L  + +  +       ++  +  D  S+            PD+       + S   V
Sbjct: 274 EARLLQSGRDRMVFPSRPANTAHLGLDEQSVMSYTHLDGSPVHPDSMFRAANCQRSLAGV 333

Query: 355 SHNPAKGGSPGCDDIVTGAMSDYLQSDMQTLPSNTKQTENFPGLQKRGLIETIPGFQQQM 534
               AK G+        G  ++Y Q  MQ LPS+ K+ E+F  LQKR  IE I GFQQ  
Sbjct: 334 PFYSAKNGT-------LGGFAEYQQPSMQQLPSDPKR-ESFADLQKRNGIELISGFQQPG 385

Query: 535 RVXXXXXXXXXXXXXXXXXAVSDPITALK 621
           +                  AVSDP+ ALK
Sbjct: 386 KA------SRLGGAGIIVGAVSDPVAALK 408


>ref|XP_004960366.1| PREDICTED: uncharacterized protein LOC101781442 isoform X1 [Setaria
            italica] gi|514743367|ref|XP_004960367.1| PREDICTED:
            uncharacterized protein LOC101781442 isoform X2 [Setaria
            italica]
          Length = 1708

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 61/209 (29%), Positives = 84/209 (40%), Gaps = 10/209 (4%)
 Frame = +1

Query: 25   EHQSDADLRTCSEKAGAEVEEH--KPGDVKLFGKILSVTTXXXXXXXXXXXXRESDRQPW 198
            E      LR+CS    +E +E   +PGDVKLFGKILS  +            +    +P 
Sbjct: 1488 EEVLQGSLRSCSHNTSSEGDEQQKRPGDVKLFGKILSHQSSLQSPVPPCNGNKS---KPP 1544

Query: 199  LPKMDGALNSACQLNLETTCGFWDSKRIQTDFSSLPDTASMLLEFKGSPT------IVSH 360
             PK+D  ++S   LN         S+   T       TA       GS T      +++ 
Sbjct: 1545 SPKID--ISSVRSLNNPRDRVVCSSRPGITHLGLEERTAKSYGHLDGSTTQPEPLLMMAK 1602

Query: 361  NPAKGGSP--GCDDIVTGAMSDYLQSDMQTLPSNTKQTENFPGLQKRGLIETIPGFQQQM 534
              +  G P     +   G  SDY Q  +Q   S+ K+ E F   QKR  +E I GFQQ  
Sbjct: 1603 CQSLAGVPFYSAKNGTVGVFSDYQQPSIQPHQSDPKRLERFSDPQKRNGVEFISGFQQPS 1662

Query: 535  RVXXXXXXXXXXXXXXXXXAVSDPITALK 621
            ++                  VSDP+ ALK
Sbjct: 1663 KI------SRFGGAGILVSGVSDPVAALK 1685


>gb|EMT26446.1| Nuclear receptor corepressor 1 [Aegilops tauschii]
          Length = 1561

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 56/183 (30%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
 Frame = +1

Query: 37   DADLRTCSEKAGAEV--EEHKPGDVKLFGKILSVTTXXXXXXXXXXXXRESDRQPWLPK- 207
            +  L+ CS KA  E   +  +PGDVKLFGKILS  +            R     P     
Sbjct: 1321 EGQLKPCSHKASTESCDQVKRPGDVKLFGKILSHQSSLQSSGSSSNATRSKPPPPTTAAG 1380

Query: 208  -----MDGALNSACQLNLETTCGFWDSKRIQTDFSSLPDTA----SMLLEF----KGSPT 348
                 MD  + S+   N   T  F   +R+   ++ L  +     S L       + S  
Sbjct: 1381 LLGSGMDRMVYSSRPTN---TAHFGQDERVVRSYTHLDGSTAQPESSLFRVAKCQRSSLA 1437

Query: 349  IVSHNPAKGGSPGCDDIVTGAMSDYLQSDMQTLPSNTKQTENFPGLQKRGLIETIPGFQQ 528
             V    AK G+        G  ++Y Q   Q LPS+ K+ E++  LQKR  IE I GFQQ
Sbjct: 1438 SVPFYSAKNGT-------LGVFAEYQQPLRQQLPSDPKRLESYADLQKRNGIELISGFQQ 1490

Query: 529  QMR 537
            Q +
Sbjct: 1491 QQQ 1493


>gb|AFW82754.1| putative MYB DNA-binding domain superfamily protein [Zea mays]
          Length = 1533

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 16/184 (8%)
 Frame = +1

Query: 37   DADLRTCSEKAGAEVEEH--KPGDVKLFGKILSVTTXXXXXXXXXXXXRESDRQPWLPKM 210
            +  LR CS    +E +E   +PGDVKLFG+ILS  +            +    +P  PK+
Sbjct: 1314 EGSLRPCSRNTSSEGDEQQKRPGDVKLFGQILSHQSTLQSSGLSCNGNKS---KPPSPKI 1370

Query: 211  DGALNS--------ACQLNLETTCGFWDSKRIQTDFSSL------PDTASMLLEFKGSPT 348
            D ++ S         C     TT      +R+   +  L      P+   ++ + + S  
Sbjct: 1371 DTSVRSMNNPMDRVVCSSRPGTTPHLGLEERLARCYGHLDGSTAQPEPLLVMAKRQRSLA 1430

Query: 349  IVSHNPAKGGSPGCDDIVTGAMSDYLQSDMQTLPSNTKQTENFPGLQKRGLIETIPGFQQ 528
             V    AK G+        G + DY Q   Q   S+ K+ E     QKR ++E I GFQQ
Sbjct: 1431 GVQFYSAKNGT-------LGVLPDYQQPSTQPQQSDPKRVERLSDPQKRNVLELISGFQQ 1483

Query: 529  QMRV 540
              RV
Sbjct: 1484 PGRV 1487


>ref|NP_001145928.1| uncharacterized protein LOC100279451 [Zea mays]
           gi|219884983|gb|ACL52866.1| unknown [Zea mays]
          Length = 367

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 16/184 (8%)
 Frame = +1

Query: 37  DADLRTCSEKAGAEVEEH--KPGDVKLFGKILSVTTXXXXXXXXXXXXRESDRQPWLPKM 210
           +  LR CS    +E +E   +PGDVKLFG+ILS  +            +    +P  PK+
Sbjct: 148 EGSLRPCSRNTSSEGDEQQKRPGDVKLFGQILSHQSTLQSSGLSCNGNKS---KPPSPKI 204

Query: 211 DGALNS--------ACQLNLETTCGFWDSKRIQTDFSSL------PDTASMLLEFKGSPT 348
           D ++ S         C     TT      +R+   +  L      P+   ++ + + S  
Sbjct: 205 DTSVRSMNNPMDRVVCSSRPGTTPHLGLEERLARCYGHLDGSAAQPEPLLVMAKRQRSLA 264

Query: 349 IVSHNPAKGGSPGCDDIVTGAMSDYLQSDMQTLPSNTKQTENFPGLQKRGLIETIPGFQQ 528
            V    AK G+        G + DY Q   Q   S+ K+ E     QKR ++E I GFQQ
Sbjct: 265 GVQFYSAKNGT-------LGVLPDYQQPSTQPQQSDPKRVERLSDPQKRNVLELISGFQQ 317

Query: 529 QMRV 540
             RV
Sbjct: 318 PGRV 321


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