BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00011267
         (602 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004960011.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]          62   9e-08
ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group] g...    62   9e-08
emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group] gi|125550...    62   9e-08
ref|XP_006854727.1| hypothetical protein AMTR_s00030p00239430 [A...    62   1e-07
emb|CBI25022.3| unnamed protein product [Vitis vinifera]               61   2e-07
ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [S...    61   2e-07
ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containi...    61   2e-07
ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays] ...    61   3e-07
gb|EPS65574.1| hypothetical protein M569_09203, partial [Genlise...    60   4e-07
ref|XP_006653052.1| PREDICTED: pentatricopeptide repeat-containi...    60   5e-07
ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containi...    60   5e-07
ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containi...    60   5e-07
ref|XP_004514863.1| PREDICTED: pentatricopeptide repeat-containi...    59   8e-07
ref|XP_002515794.1| pentatricopeptide repeat-containing protein,...    59   8e-07
gb|EMJ14988.1| hypothetical protein PRUPE_ppa018727m1g, partial ...    59   1e-06
gb|EXB55868.1| Pentatricopeptide repeat-containing protein [Moru...    58   2e-06
ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_006445764.1| hypothetical protein CICLE_v10014488mg [Citr...    58   2e-06
ref|XP_004171307.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06

>ref|XP_004960011.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like isoform X1 [Setaria italica]
           gi|514741919|ref|XP_004960012.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like isoform X2 [Setaria italica]
          Length = 893

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 53/169 (31%), Positives = 62/169 (36%)
 Frame = +2

Query: 95  LMDLLFVPASFSPTTLVVKPSVLLSPRASHKXXXXXXXXXXXXLSSATIRRPLNPPFRQT 274
           LM  L +PA+ SPT  +  P     P AS                SA+ RRP  PP    
Sbjct: 2   LMQFLSLPAASSPTPHLPLPRTF-KPLAS----------------SASFRRPSQPP---- 40

Query: 275 SPVEPDTAPSTALKPSTTNXXXXXXXXXXXXXXXXXXXXXXXXXXVETLXXXXXXXXXXX 454
            P  P  +P     P T                             E             
Sbjct: 41  -PAPPKPSPPPPPPPPTNPLSSKLWLSSKLSPPPSPPPPPSLEAIEEPPPPPPPPEPEPE 99

Query: 455 XAVNPDSMADAAKYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVEKCEL 601
               P    D   +R KGK+FVGNLP W +K EI EFFRQFGP+EK EL
Sbjct: 100 QEAAPLRQED---FRQKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVEL 145


>emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
          Length = 905

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
 Frame = +2

Query: 467 PDSMADAAK---YRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVEKCEL 601
           P++ A+A +   +R KGK+FVGNLP W +K EI EFFRQFGP+EK EL
Sbjct: 104 PEAEAEARRQEEFRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVEL 151


>ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
           gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa
           Japonica Group]
          Length = 901

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
 Frame = +2

Query: 467 PDSMADAAK---YRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVEKCEL 601
           P++ A+A +   +R KGK+FVGNLP W +K EI EFFRQFGP+EK EL
Sbjct: 104 PEAEAEARRQEEFRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVEL 151


>emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group] gi|125550286|gb|EAY96108.1|
           hypothetical protein OsI_17985 [Oryza sativa Indica
           Group]
          Length = 900

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 3/48 (6%)
 Frame = +2

Query: 467 PDSMADAAK---YRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVEKCEL 601
           P++ A+A +   +R KGK+FVGNLP W +K EI EFFRQFGP+EK EL
Sbjct: 103 PEAEAEARRQEEFRHKGKVFVGNLPLWARKAEIAEFFRQFGPLEKVEL 150


>ref|XP_006854727.1| hypothetical protein AMTR_s00030p00239430 [Amborella trichopoda]
           gi|548858413|gb|ERN16194.1| hypothetical protein
           AMTR_s00030p00239430 [Amborella trichopoda]
          Length = 972

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = +2

Query: 470 DSMADAAKYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           +SM     +R +GKIFVGNLP W+KKNEI EFFRQFGPV+
Sbjct: 148 ESMVIEPSFREEGKIFVGNLPLWIKKNEIAEFFRQFGPVK 187


>emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +2

Query: 491 KYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           ++R +GKIFVGNLP WVKKNE+ EFFRQFGP+E
Sbjct: 142 EFRQEGKIFVGNLPNWVKKNEVSEFFRQFGPIE 174


>ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
           gi|241938535|gb|EES11680.1| hypothetical protein
           SORBIDRAFT_06g033480 [Sorghum bicolor]
          Length = 888

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 3/48 (6%)
 Frame = +2

Query: 467 PDSMADAAK---YRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVEKCEL 601
           P+  A+A +   +R KGK+FVGNLP W +K +I EFFRQFGP+EK EL
Sbjct: 93  PEQEAEALRQEDFRQKGKVFVGNLPLWARKPDIAEFFRQFGPLEKVEL 140


>ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +2

Query: 491 KYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           ++R +GKIFVGNLP WVKKNE+ EFFRQFGP+E
Sbjct: 141 EFRQEGKIFVGNLPNWVKKNEVSEFFRQFGPIE 173


>ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
           gi|95931777|gb|ABF57644.1| pentatricopeptide repeat
           protein [Zea mays]
          Length = 886

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +2

Query: 494 YRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVEKCEL 601
           +R KGK+FVGNLP W +K EI EFFRQFGP+EK EL
Sbjct: 103 FRQKGKVFVGNLPLWARKPEIAEFFRQFGPLEKVEL 138


>gb|EPS65574.1| hypothetical protein M569_09203, partial [Genlisea aurea]
          Length = 826

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = +2

Query: 494 YRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           +R KGKIFVGNLP W+KKNE+ EFFRQFGP++
Sbjct: 48  FREKGKIFVGNLPLWIKKNEVAEFFRQFGPIK 79


>ref|XP_006653052.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Oryza brachyantha]
          Length = 901

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = +2

Query: 494 YRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVEKCEL 601
           +R KGK+FVGNLP W +K EI EFFRQFGP+EK EL
Sbjct: 116 FRHKGKVFVGNLPLWARKVEIAEFFRQFGPLEKVEL 151


>ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Solanum tuberosum]
          Length = 944

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 23/40 (57%), Positives = 33/40 (82%)
 Frame = +2

Query: 470 DSMADAAKYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           + M  ++++R KGK+F+GNLP WVKK E+ EFFRQFGP++
Sbjct: 147 EEMQKSSEFREKGKVFIGNLPIWVKKKELTEFFRQFGPIK 186


>ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Solanum lycopersicum]
          Length = 932

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 23/40 (57%), Positives = 33/40 (82%)
 Frame = +2

Query: 470 DSMADAAKYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           + M  ++++R KGK+F+GNLP WVKK E+ EFFRQFGP++
Sbjct: 136 EEMQKSSEFREKGKVFIGNLPIWVKKKELTEFFRQFGPIK 175


>ref|XP_004514863.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cicer arietinum]
          Length = 947

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +2

Query: 470 DSMADAAKYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           +S  D  ++R  GKIFVGNLP WVKK+E+ EFFRQFGP++
Sbjct: 142 ESSDDRTEFRQPGKIFVGNLPGWVKKHEVSEFFRQFGPIK 181


>ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545122|gb|EEF46633.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 924

 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = +2

Query: 491 KYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVEK 592
           ++R +GKIF+GNLP W+KK+EI EFFRQFGP++K
Sbjct: 157 EFRQEGKIFIGNLPNWIKKHEISEFFRQFGPIKK 190


>gb|EMJ14988.1| hypothetical protein PRUPE_ppa018727m1g, partial [Prunus persica]
          Length = 740

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 23/33 (69%), Positives = 30/33 (90%)
 Frame = +2

Query: 491 KYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           K++ +GKIFVGNLP WVKKNE+ +FFRQFGP++
Sbjct: 162 KFQQEGKIFVGNLPNWVKKNEVFDFFRQFGPIK 194


>gb|EXB55868.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
          Length = 946

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 22/43 (51%), Positives = 34/43 (79%)
 Frame = +2

Query: 461 VNPDSMADAAKYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           V  ++ +   ++R +GKIFVGNLP W++KN++ EFFRQFGP++
Sbjct: 130 VEENADSPRVEFRQEGKIFVGNLPSWIRKNDVAEFFRQFGPIK 172


>ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Citrus sinensis]
          Length = 948

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 21/36 (58%), Positives = 32/36 (88%)
 Frame = +2

Query: 482 DAAKYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           +  ++R +GKIFVGNLP W+KK++++EFFRQFGP++
Sbjct: 144 EETEFRQEGKIFVGNLPNWIKKHQVMEFFRQFGPIK 179


>ref|XP_006445764.1| hypothetical protein CICLE_v10014488mg [Citrus clementina]
           gi|567906903|ref|XP_006445765.1| hypothetical protein
           CICLE_v10014488mg [Citrus clementina]
           gi|557548375|gb|ESR59004.1| hypothetical protein
           CICLE_v10014488mg [Citrus clementina]
           gi|557548376|gb|ESR59005.1| hypothetical protein
           CICLE_v10014488mg [Citrus clementina]
          Length = 683

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 21/36 (58%), Positives = 32/36 (88%)
 Frame = +2

Query: 482 DAAKYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           +  ++R +GKIFVGNLP W+KK++++EFFRQFGP++
Sbjct: 144 EETEFRQEGKIFVGNLPNWIKKHQVMEFFRQFGPIK 179


>ref|XP_004171307.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 398

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/33 (69%), Positives = 30/33 (90%)
 Frame = +2

Query: 491 KYRVKGKIFVGNLPRWVKKNEIVEFFRQFGPVE 589
           ++R +GKIFVGNLP W+KK+E+ EFFRQFGPV+
Sbjct: 162 QFRQEGKIFVGNLPNWIKKHEVQEFFRQFGPVK 194