BLASTX nr result
ID: Zingiber25_contig00011262
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00011262
(413 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN08219.1| hypothetical protein [Oryza sativa Japonica Group... 75 9e-12
tpg|DAA50245.1| TPA: putative RING zinc finger domain superfamil... 75 9e-12
gb|EEC75696.1| hypothetical protein OsI_12512 [Oryza sativa Indi... 75 9e-12
ref|NP_001050611.1| Os03g0598700 [Oryza sativa Japonica Group] g... 75 9e-12
ref|NP_001148744.1| protein binding protein [Zea mays] gi|195621... 74 3e-11
ref|XP_006650290.1| PREDICTED: E3 ubiquitin-protein ligase At3g0... 73 4e-11
ref|NP_001068313.1| Os11g0629300 [Oryza sativa Japonica Group] g... 72 6e-11
gb|EEE52409.1| hypothetical protein OsJ_34516 [Oryza sativa Japo... 72 6e-11
ref|XP_006663062.1| PREDICTED: E3 ubiquitin-protein ligase At3g0... 72 8e-11
ref|XP_004982470.1| PREDICTED: E3 ubiquitin-protein ligase At3g0... 72 1e-10
gb|EMT04173.1| E3 ubiquitin-protein ligase [Aegilops tauschii] 71 1e-10
ref|XP_003562313.1| PREDICTED: E3 ubiquitin-protein ligase At3g0... 67 2e-09
dbj|BAJ92114.1| predicted protein [Hordeum vulgare subsp. vulgar... 67 2e-09
gb|EMT14101.1| E3 ubiquitin-protein ligase [Aegilops tauschii] 66 4e-09
ref|XP_003577324.1| PREDICTED: E3 ubiquitin-protein ligase At3g0... 66 4e-09
gb|EAY81585.1| hypothetical protein OsI_36751 [Oryza sativa Indi... 66 4e-09
ref|NP_001067717.1| Os11g0294600 [Oryza sativa Japonica Group] g... 66 4e-09
ref|XP_006856352.1| hypothetical protein AMTR_s00047p00177970 [A... 66 5e-09
ref|XP_002454800.1| hypothetical protein SORBIDRAFT_04g037610 [S... 66 5e-09
ref|XP_002467359.1| hypothetical protein SORBIDRAFT_01g026330 [S... 66 5e-09
>gb|AAN08219.1| hypothetical protein [Oryza sativa Japonica Group]
gi|28875970|gb|AAO59979.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 233
Score = 75.1 bits (183), Expect = 9e-12
Identities = 49/133 (36%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = -1
Query: 398 DNPRSSQPQAQQDSLVLGHTKDNTVSPLLSNDPRGSHSQRQNEDLVSGH-AVIPEGVQKS 222
D+PR S + LV GH K +T GS + +N D +S AV +G +
Sbjct: 78 DDPRFSH-HTEHHPLVGGHDKASTTF-----HKSGSLGESKNADSISNSKAVKDDGPSTA 131
Query: 221 VSIRYEKGTNTQPDRNYENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTLQC 42
V + G++ +++ +G D ED CPICLE+Y ENP+ TLQC
Sbjct: 132 VK---DDGSSV---KHHSDG----LHIGKEQVHDLFDFEDDCPICLEEYDYENPKMTLQC 181
Query: 41 AHQFHLCCIYEWM 3
H FHLCCIYEWM
Sbjct: 182 NHNFHLCCIYEWM 194
>tpg|DAA50245.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 205
Score = 75.1 bits (183), Expect = 9e-12
Identities = 53/138 (38%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Frame = -1
Query: 383 SQPQAQQDSLVLGHTKDNTVSPLLSNDPRGSHSQRQNEDLVSGHAVIPEGVQKSVSIRYE 204
S P Q DSL T PL +DP+ S Q+ LVSGH P VQK
Sbjct: 56 SPPANQVDSL---DTLGLPPRPLPYDDPQSSPRMVQHP-LVSGHDKAPTHVQKLGQPAET 111
Query: 203 KGTNT-----------QPDRNYENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPR 57
K T+T + + GS SD ED CP+CLE+Y ENP+
Sbjct: 112 KNTHTGSTCTAHKVSASSPKQHSEGS---RMDDGVQFCDSSDSEDDCPVCLEEYDYENPK 168
Query: 56 STLQCAHQFHLCCIYEWM 3
LQC H FHL CIYEWM
Sbjct: 169 IALQCKHNFHLSCIYEWM 186
>gb|EEC75696.1| hypothetical protein OsI_12512 [Oryza sativa Indica Group]
Length = 213
Score = 75.1 bits (183), Expect = 9e-12
Identities = 49/133 (36%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = -1
Query: 398 DNPRSSQPQAQQDSLVLGHTKDNTVSPLLSNDPRGSHSQRQNEDLVSGH-AVIPEGVQKS 222
D+PR S + LV GH K +T GS + +N D +S AV +G +
Sbjct: 78 DDPRFSH-HTEHHPLVGGHDKASTTF-----HKSGSLGESKNADSISNSKAVKDDGPSTA 131
Query: 221 VSIRYEKGTNTQPDRNYENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTLQC 42
V + G++ +++ +G D ED CPICLE+Y ENP+ TLQC
Sbjct: 132 VK---DDGSSV---KHHSDG----LHIGKEQVHDLFDFEDDCPICLEEYDYENPKMTLQC 181
Query: 41 AHQFHLCCIYEWM 3
H FHLCCIYEWM
Sbjct: 182 NHNFHLCCIYEWM 194
>ref|NP_001050611.1| Os03g0598700 [Oryza sativa Japonica Group]
gi|108709672|gb|ABF97467.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113549082|dbj|BAF12525.1| Os03g0598700 [Oryza sativa
Japonica Group] gi|215766027|dbj|BAG98255.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222625326|gb|EEE59458.1| hypothetical protein
OsJ_11649 [Oryza sativa Japonica Group]
Length = 213
Score = 75.1 bits (183), Expect = 9e-12
Identities = 49/133 (36%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Frame = -1
Query: 398 DNPRSSQPQAQQDSLVLGHTKDNTVSPLLSNDPRGSHSQRQNEDLVSGH-AVIPEGVQKS 222
D+PR S + LV GH K +T GS + +N D +S AV +G +
Sbjct: 78 DDPRFSH-HTEHHPLVGGHDKASTTF-----HKSGSLGESKNADSISNSKAVKDDGPSTA 131
Query: 221 VSIRYEKGTNTQPDRNYENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTLQC 42
V + G++ +++ +G D ED CPICLE+Y ENP+ TLQC
Sbjct: 132 VK---DDGSSV---KHHSDG----LHIGKEQVHDLFDFEDDCPICLEEYDYENPKMTLQC 181
Query: 41 AHQFHLCCIYEWM 3
H FHLCCIYEWM
Sbjct: 182 NHNFHLCCIYEWM 194
>ref|NP_001148744.1| protein binding protein [Zea mays] gi|195621784|gb|ACG32722.1|
protein binding protein [Zea mays]
Length = 205
Score = 73.6 bits (179), Expect = 3e-11
Identities = 46/117 (39%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Frame = -1
Query: 320 PLLSNDPRGSHSQRQNEDLVSGHAVIPEGVQKSVSIRYEKGTNT-----------QPDRN 174
PL +DP+ S Q+ LVSGH P VQK K T+T +
Sbjct: 74 PLPYDDPQSSPRMVQHP-LVSGHDKAPTHVQKLGQPAETKNTHTGSTCTAHKVSASSPKQ 132
Query: 173 YENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
+ GS SD ED CP+CLE+Y ENP+ LQC H FHL CIYEWM
Sbjct: 133 HSEGS---RMDDGVQFCDSSDSEDDCPVCLEEYDYENPKIALQCKHNFHLSCIYEWM 186
>ref|XP_006650290.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X1
[Oryza brachyantha]
Length = 201
Score = 72.8 bits (177), Expect = 4e-11
Identities = 45/135 (33%), Positives = 62/135 (45%)
Frame = -1
Query: 407 LSNDNPRSSQPQAQQDSLVLGHTKDNTVSPLLSNDPRGSHSQRQNEDLVSGHAVIPEGVQ 228
L D+P+ S Q ++GH K +T S D GS + +N D +S + +
Sbjct: 71 LHYDDPQFSHQTEHQP--LVGHDKASTTS-----DESGSLEESKNVDSISNSIAVKDNES 123
Query: 227 KSVSIRYEKGTNTQPDRNYENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTL 48
S++Y G + + D ED CPICLE+Y ENP+ TL
Sbjct: 124 ---SVKYHSGGLDIAEAQVND---------------PVDFEDECPICLEEYHYENPKITL 165
Query: 47 QCAHQFHLCCIYEWM 3
QC H +HL CIYEWM
Sbjct: 166 QCNHNYHLGCIYEWM 180
>ref|NP_001068313.1| Os11g0629300 [Oryza sativa Japonica Group]
gi|77552144|gb|ABA94941.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|77552145|gb|ABA94942.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113645535|dbj|BAF28676.1| Os11g0629300 [Oryza sativa
Japonica Group] gi|215767806|dbj|BAH00035.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 220
Score = 72.4 bits (176), Expect = 6e-11
Identities = 47/135 (34%), Positives = 57/135 (42%)
Frame = -1
Query: 407 LSNDNPRSSQPQAQQDSLVLGHTKDNTVSPLLSNDPRGSHSQRQNEDLVSGHAVIPEGVQ 228
L D+PR S PQ +D LV H + P S R N+D P
Sbjct: 79 LPYDDPRFSPPQ--RDWLVSRHGPS-------CHSPEESEPLRANDD---EEMETPSSTH 126
Query: 227 KSVSIRYEKGTNTQPDRNYENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTL 48
KS Y+ + E ++ ED CP CLEDYT ENPR +
Sbjct: 127 KSSKTNYDTKMKRSSSTHGEKLPTKEPGNYFTYFSPSAEDEDVCPTCLEDYTSENPRIVM 186
Query: 47 QCAHQFHLCCIYEWM 3
QC+H FHL CIYEWM
Sbjct: 187 QCSHHFHLGCIYEWM 201
>gb|EEE52409.1| hypothetical protein OsJ_34516 [Oryza sativa Japonica Group]
Length = 219
Score = 72.4 bits (176), Expect = 6e-11
Identities = 47/135 (34%), Positives = 57/135 (42%)
Frame = -1
Query: 407 LSNDNPRSSQPQAQQDSLVLGHTKDNTVSPLLSNDPRGSHSQRQNEDLVSGHAVIPEGVQ 228
L D+PR S PQ +D LV H + P S R N+D P
Sbjct: 78 LPYDDPRFSPPQ--RDWLVSRHGPS-------CHSPEESEPLRANDD---EEMETPSSTH 125
Query: 227 KSVSIRYEKGTNTQPDRNYENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTL 48
KS Y+ + E ++ ED CP CLEDYT ENPR +
Sbjct: 126 KSSKTNYDTKMKRSSSTHGEKLPTKEPGNYFTYFSPSAEDEDVCPTCLEDYTSENPRIVM 185
Query: 47 QCAHQFHLCCIYEWM 3
QC+H FHL CIYEWM
Sbjct: 186 QCSHHFHLGCIYEWM 200
>ref|XP_006663062.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like isoform X1
[Oryza brachyantha] gi|573961823|ref|XP_006663063.1|
PREDICTED: E3 ubiquitin-protein ligase At3g02290-like
isoform X2 [Oryza brachyantha]
Length = 220
Score = 72.0 bits (175), Expect = 8e-11
Identities = 47/135 (34%), Positives = 57/135 (42%)
Frame = -1
Query: 407 LSNDNPRSSQPQAQQDSLVLGHTKDNTVSPLLSNDPRGSHSQRQNEDLVSGHAVIPEGVQ 228
L D+PR S PQ +D LV H + P S R N+D +P
Sbjct: 79 LPYDDPRFSPPQ--RDWLVSRHGPS-------CHSPEESEPLRANDD---EDMEVPSSTN 126
Query: 227 KSVSIRYEKGTNTQPDRNYENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTL 48
KS Y+ E ++ ED CP CLEDYT ENPR +
Sbjct: 127 KSSKTNYDTKMKRCSSTYGETQPAKEPGNYFTYFSPSAEDEDVCPTCLEDYTSENPRIVM 186
Query: 47 QCAHQFHLCCIYEWM 3
QC+H FHL CIYEWM
Sbjct: 187 QCSHHFHLGCIYEWM 201
>ref|XP_004982470.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Setaria
italica]
Length = 208
Score = 71.6 bits (174), Expect = 1e-10
Identities = 48/135 (35%), Positives = 63/135 (46%)
Frame = -1
Query: 407 LSNDNPRSSQPQAQQDSLVLGHTKDNTVSPLLSNDPRGSHSQRQNEDLVSGHAVIPEGVQ 228
L D+PR S P Q +V GH K +T G ++R+N D+ G + V
Sbjct: 79 LPYDDPRFSPPMVQHP-IVSGHDKSST-----HFQKPGQLTERKNTDI--GSTCTSQKVD 130
Query: 227 KSVSIRYEKGTNTQPDRNYENGSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTL 48
S S+++ G + + S D ED CPICLE+Y ENP+ L
Sbjct: 131 GS-SVKHHLGGSRIDGIQVSDSS---------------DNEDDCPICLEEYGYENPKIAL 174
Query: 47 QCAHQFHLCCIYEWM 3
QC H FHL CIYEWM
Sbjct: 175 QCNHNFHLSCIYEWM 189
>gb|EMT04173.1| E3 ubiquitin-protein ligase [Aegilops tauschii]
Length = 257
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
Frame = -1
Query: 320 PLLSNDPRGSHSQRQNEDLVSGHAVIPEGVQKSVSIRYEKGTNTQP---DRNYENGSIXX 150
PL +DP+ H Q + LV+GH QKS + +T+ D+ + S+
Sbjct: 75 PLPYDDPQFRH-QTERHPLVAGHDKASTQSQKSKLLEENNDADTRSTCADQKADGPSLKD 133
Query: 149 XXXXXXXXXXXS----DVEDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
D ED CPICLE+Y ENP+ LQC H FHL CIYEWM
Sbjct: 134 QSGGKKIGGAQVCVPSDSEDDCPICLEEYDYENPKIVLQCNHNFHLSCIYEWM 186
>ref|XP_003562313.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Brachypodium
distachyon]
Length = 207
Score = 67.0 bits (162), Expect = 2e-09
Identities = 41/114 (35%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Frame = -1
Query: 320 PLLSNDPRGSHSQRQNEDLVSGHAVIPEGVQKSVSIRYEKGTNTQPD--------RNYEN 165
PL +DPR SH Q ++ LVS H QK + K +T + +
Sbjct: 76 PLPYDDPRFSH-QTEHHPLVSEHEKASTQFQKPNQLGESKNVDTTSTCTADKTDGSSVKT 134
Query: 164 GSIXXXXXXXXXXXXXSDVEDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
S SD E+ CPICLE+Y ENP+ L+C H +HL CIYEWM
Sbjct: 135 QSGAGPKIGGTQLYVPSDSEEDCPICLEEYDYENPKIALECNHSYHLGCIYEWM 188
>dbj|BAJ92114.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519763|dbj|BAK00254.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 201
Score = 67.0 bits (162), Expect = 2e-09
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -1
Query: 113 DVEDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
D ED CPICLE+Y ENP+ LQC H FHL CIYEWM
Sbjct: 146 DCEDDCPICLEEYNYENPKIVLQCNHNFHLSCIYEWM 182
>gb|EMT14101.1| E3 ubiquitin-protein ligase [Aegilops tauschii]
Length = 186
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1
Query: 107 EDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
ED CP CLEDYT ENPR +QC+H FHL CIYEWM
Sbjct: 133 EDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWM 167
>ref|XP_003577324.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Brachypodium
distachyon]
Length = 221
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1
Query: 107 EDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
ED CP CLEDYT ENPR +QC+H FHL CIYEWM
Sbjct: 168 EDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWM 202
>gb|EAY81585.1| hypothetical protein OsI_36751 [Oryza sativa Indica Group]
Length = 100
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -1
Query: 107 EDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
ED CP CLEDYT ENPR +QC+H FHL CIYEWM
Sbjct: 31 EDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWM 65
>ref|NP_001067717.1| Os11g0294600 [Oryza sativa Japonica Group]
gi|62734051|gb|AAX96160.1| Zinc finger, C3HC4 type (RING
finger), putative [Oryza sativa Japonica Group]
gi|108864266|gb|ABG22454.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|108864267|gb|ABG22455.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113644939|dbj|BAF28080.1| Os11g0294600 [Oryza sativa
Japonica Group] gi|215715247|dbj|BAG94998.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215741480|dbj|BAG97975.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218185604|gb|EEC68031.1| hypothetical protein
OsI_35849 [Oryza sativa Indica Group]
gi|222615859|gb|EEE51991.1| hypothetical protein
OsJ_33678 [Oryza sativa Japonica Group]
Length = 173
Score = 66.2 bits (160), Expect = 4e-09
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -1
Query: 113 DVEDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
D ED CPICLE+Y ENPRS +C H FHLCCI EWM
Sbjct: 117 DEEDVCPICLEEYDAENPRSLTKCEHHFHLCCILEWM 153
>ref|XP_006856352.1| hypothetical protein AMTR_s00047p00177970 [Amborella trichopoda]
gi|548860212|gb|ERN17819.1| hypothetical protein
AMTR_s00047p00177970 [Amborella trichopoda]
Length = 246
Score = 65.9 bits (159), Expect = 5e-09
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = -1
Query: 113 DVEDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
D ED CP CLE+YT ENP+ T QC+H FHL CIYEWM
Sbjct: 176 DDEDVCPTCLEEYTTENPKITTQCSHHFHLGCIYEWM 212
>ref|XP_002454800.1| hypothetical protein SORBIDRAFT_04g037610 [Sorghum bicolor]
gi|241934631|gb|EES07776.1| hypothetical protein
SORBIDRAFT_04g037610 [Sorghum bicolor]
Length = 171
Score = 65.9 bits (159), Expect = 5e-09
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -1
Query: 113 DVEDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
D ED CPICLE+Y ENPRS +C H FHLCCI EWM
Sbjct: 115 DEEDVCPICLEEYDEENPRSVTRCEHHFHLCCILEWM 151
>ref|XP_002467359.1| hypothetical protein SORBIDRAFT_01g026330 [Sorghum bicolor]
gi|241921213|gb|EER94357.1| hypothetical protein
SORBIDRAFT_01g026330 [Sorghum bicolor]
Length = 176
Score = 65.9 bits (159), Expect = 5e-09
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -1
Query: 113 DVEDSCPICLEDYTIENPRSTLQCAHQFHLCCIYEWM 3
D ED CPICLE+Y ENPRS +C H FHLCCI EWM
Sbjct: 120 DEEDVCPICLEEYDEENPRSVTKCEHHFHLCCILEWM 156