BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00011236
         (414 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [...   250   1e-64
gb|EOX95794.1| 3'-5'-exoribonuclease family protein isoform 2 [T...   249   2e-64
gb|EOX95793.1| 3'-5'-exoribonuclease family protein isoform 1 [T...   249   2e-64
ref|XP_006443538.1| hypothetical protein CICLE_v10021944mg [Citr...   248   8e-64
ref|XP_004494789.1| PREDICTED: exosome complex component RRP41-l...   248   8e-64
ref|XP_006854551.1| hypothetical protein AMTR_s00030p00070290, p...   246   2e-63
gb|EMJ25006.1| hypothetical protein PRUPE_ppa010664mg [Prunus pe...   246   2e-63
ref|XP_002439921.1| hypothetical protein SORBIDRAFT_09g022550 [S...   246   2e-63
ref|XP_003549686.1| PREDICTED: exosome complex component RRP41 i...   246   3e-63
gb|ACU22892.1| unknown [Glycine max]                                  246   3e-63
ref|XP_006339670.1| PREDICTED: exosome complex component RRP41-l...   244   7e-63
gb|EEC84173.1| hypothetical protein OsI_30553 [Oryza sativa Indi...   244   9e-63
ref|XP_004961250.1| PREDICTED: exosome complex component RRP41-l...   244   1e-62
ref|XP_004290319.1| PREDICTED: exosome complex component RRP41-l...   244   1e-62
ref|XP_002441503.1| hypothetical protein SORBIDRAFT_09g028170 [S...   244   1e-62
ref|XP_004229977.1| PREDICTED: exosome complex component RRP41-l...   243   2e-62
ref|XP_004143616.1| PREDICTED: exosome complex component RRP41-l...   243   2e-62
ref|XP_002320845.1| exonuclease RRP41 family protein [Populus tr...   243   2e-62
ref|XP_004299129.1| PREDICTED: exosome complex component RRP41-l...   242   3e-62
ref|NP_001131612.1| RNase PH homolog [Zea mays] gi|194692034|gb|...   242   3e-62

>ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [Vitis vinifera]
           gi|147867252|emb|CAN81194.1| hypothetical protein
           VITISV_022853 [Vitis vinifera]
           gi|297745390|emb|CBI40470.3| unnamed protein product
           [Vitis vinifera]
          Length = 241

 Score =  250 bits (639), Expect = 1e-64
 Identities = 125/138 (90%), Positives = 132/138 (95%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQIRGEIG VAKADGSA FEMGNTKVIAAVYGPREV+N+ QQI++QALVRCEY+
Sbjct: 14  RRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQQISDQALVRCEYT 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTMEACIL HLMPRSQIDIFVQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>gb|EOX95794.1| 3'-5'-exoribonuclease family protein isoform 2 [Theobroma cacao]
          Length = 241

 Score =  249 bits (637), Expect = 2e-64
 Identities = 125/138 (90%), Positives = 132/138 (95%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQIR EIG VA+ADGSA+FEMGNTKVIAAVYGPREVQN+ QQI++QALVRCEYS
Sbjct: 14  RRPMEMRQIRAEIGTVARADGSAVFEMGNTKVIAAVYGPREVQNRSQQISDQALVRCEYS 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTMEACIL HLMPRSQIDIFVQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>gb|EOX95793.1| 3'-5'-exoribonuclease family protein isoform 1 [Theobroma cacao]
          Length = 316

 Score =  249 bits (637), Expect = 2e-64
 Identities = 125/138 (90%), Positives = 132/138 (95%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQIR EIG VA+ADGSA+FEMGNTKVIAAVYGPREVQN+ QQI++QALVRCEYS
Sbjct: 89  RRPMEMRQIRAEIGTVARADGSAVFEMGNTKVIAAVYGPREVQNRSQQISDQALVRCEYS 148

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTMEACIL HLMPRSQIDIFVQVLQADGGTRSA
Sbjct: 149 MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSA 208

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 209 CINAATLALADAGIPMRD 226


>ref|XP_006443538.1| hypothetical protein CICLE_v10021944mg [Citrus clementina]
           gi|568851047|ref|XP_006479205.1| PREDICTED: exosome
           complex component RRP41-like isoform X1 [Citrus
           sinensis] gi|568851049|ref|XP_006479206.1| PREDICTED:
           exosome complex component RRP41-like isoform X2 [Citrus
           sinensis] gi|557545800|gb|ESR56778.1| hypothetical
           protein CICLE_v10021944mg [Citrus clementina]
          Length = 241

 Score =  248 bits (632), Expect = 8e-64
 Identities = 124/138 (89%), Positives = 131/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQ+R EIG VAKADGSA+FEMGNTKVIAAVYGPREVQNK QQ+++QALVRCEYS
Sbjct: 14  RRPTEMRQLRAEIGNVAKADGSAVFEMGNTKVIAAVYGPREVQNKSQQMSDQALVRCEYS 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTMEACIL HLMPRSQIDIFVQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIFVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLAL DAGIPMRD
Sbjct: 134 CINAATLALQDAGIPMRD 151


>ref|XP_004494789.1| PREDICTED: exosome complex component RRP41-like isoform X1 [Cicer
           arietinum] gi|502113882|ref|XP_004494790.1| PREDICTED:
           exosome complex component RRP41-like isoform X2 [Cicer
           arietinum]
          Length = 241

 Score =  248 bits (632), Expect = 8e-64
 Identities = 123/138 (89%), Positives = 132/138 (95%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQIR EIG V+KADGSA+FEMGNTKVIAAVYGPREVQN+ QQ+++QALVRCEYS
Sbjct: 14  RRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQQMSDQALVRCEYS 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTMEACIL HLMPRSQIDI+VQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>ref|XP_006854551.1| hypothetical protein AMTR_s00030p00070290, partial [Amborella
           trichopoda] gi|548858237|gb|ERN16018.1| hypothetical
           protein AMTR_s00030p00070290, partial [Amborella
           trichopoda]
          Length = 246

 Score =  246 bits (628), Expect = 2e-63
 Identities = 123/138 (89%), Positives = 131/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQI  EIGVV KADGSA+FEMGNTKVIAAVYGPREVQN+ QQ+++QALVRCEYS
Sbjct: 33  RRPLEMRQINAEIGVVVKADGSAVFEMGNTKVIAAVYGPREVQNRSQQLSDQALVRCEYS 92

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR RRPKGDRRS+EISLVIRQTMEACIL HLMPRSQIDI+VQVLQADGGTRSA
Sbjct: 93  MANFSTGDRLRRPKGDRRSSEISLVIRQTMEACILTHLMPRSQIDIYVQVLQADGGTRSA 152

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 153 CINAATLALADAGIPMRD 170


>gb|EMJ25006.1| hypothetical protein PRUPE_ppa010664mg [Prunus persica]
          Length = 241

 Score =  246 bits (628), Expect = 2e-63
 Identities = 123/138 (89%), Positives = 131/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQIR EIGVVAKA GSALFEMGNTKVIAAVYGPREVQN+ QQ+N+ ALVRCEY+
Sbjct: 14  RRPMEMRQIRAEIGVVAKAAGSALFEMGNTKVIAAVYGPREVQNRSQQLNDSALVRCEYT 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTMEACI+ HLMPRSQIDIFVQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACIMTHLMPRSQIDIFVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAA+LALADAGIPMRD
Sbjct: 134 CINAASLALADAGIPMRD 151


>ref|XP_002439921.1| hypothetical protein SORBIDRAFT_09g022550 [Sorghum bicolor]
           gi|241945206|gb|EES18351.1| hypothetical protein
           SORBIDRAFT_09g022550 [Sorghum bicolor]
          Length = 242

 Score =  246 bits (628), Expect = 2e-63
 Identities = 123/139 (88%), Positives = 133/139 (95%), Gaps = 1/139 (0%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQIN-NQALVRCEY 238
           RRPN+MRQ++GE+GVVA+ADGSALFEMGNT+VIAAVYGPREVQNKGQQ+N N+ALVRCEY
Sbjct: 15  RRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSNEALVRCEY 74

Query: 237 SMANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRS 58
            MA FSTGDR R+PKGDRRSTEISLVIRQTMEA IL HLMPRSQIDI+VQVLQADGGTRS
Sbjct: 75  RMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPRSQIDIYVQVLQADGGTRS 134

Query: 57  ACINAATLALADAGIPMRD 1
           ACINAATLALADAGIPMRD
Sbjct: 135 ACINAATLALADAGIPMRD 153


>ref|XP_003549686.1| PREDICTED: exosome complex component RRP41 isoform X1 [Glycine max]
           gi|571535380|ref|XP_006600700.1| PREDICTED: exosome
           complex component RRP41 isoform X2 [Glycine max]
          Length = 241

 Score =  246 bits (627), Expect = 3e-63
 Identities = 122/138 (88%), Positives = 131/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQIR EIG V+KADGSA+FEMGNTKVIAAVYGPREVQN+ QQI++ ALVRCEYS
Sbjct: 14  RRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQQISSHALVRCEYS 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTMEACIL HL+PRSQIDI+VQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIYVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>gb|ACU22892.1| unknown [Glycine max]
          Length = 190

 Score =  246 bits (627), Expect = 3e-63
 Identities = 122/138 (88%), Positives = 131/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQIR EIG V+KADGSA+FEMGNTKVIAAVYGPREVQN+ QQI++ ALVRCEYS
Sbjct: 14  RRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQQISSHALVRCEYS 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTMEACIL HL+PRSQIDI+VQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIYVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>ref|XP_006339670.1| PREDICTED: exosome complex component RRP41-like isoform X1 [Solanum
           tuberosum] gi|565345171|ref|XP_006339671.1| PREDICTED:
           exosome complex component RRP41-like isoform X2 [Solanum
           tuberosum]
          Length = 243

 Score =  244 bits (624), Expect = 7e-63
 Identities = 122/138 (88%), Positives = 131/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQ+R EIGVV++ADGSA FEMGNTKVIAAVYGPREVQN+ QQ+N+QALVRCEYS
Sbjct: 14  RRPMEMRQLRAEIGVVSRADGSASFEMGNTKVIAAVYGPREVQNRSQQMNDQALVRCEYS 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+ KGDRRSTEISLVIRQTMEACIL HLMPRSQIDI+VQVLQADGGTRSA
Sbjct: 74  MANFSTGDRRRKTKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>gb|EEC84173.1| hypothetical protein OsI_30553 [Oryza sativa Indica Group]
           gi|222641142|gb|EEE69274.1| hypothetical protein
           OsJ_28540 [Oryza sativa Japonica Group]
          Length = 242

 Score =  244 bits (623), Expect = 9e-63
 Identities = 122/139 (87%), Positives = 134/139 (96%), Gaps = 1/139 (0%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQ-ALVRCEY 238
           RRPN+MRQ++GE+GVVA+ADGSALFEMGNT+VIAAVYGPREVQNKGQQ+N++ ALVRCEY
Sbjct: 15  RRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSKDALVRCEY 74

Query: 237 SMANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRS 58
            MA+FSTGDR R+PKGDRRSTEISLVIRQTMEA IL HLMPRSQIDIFVQVLQADGGTR+
Sbjct: 75  RMADFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPRSQIDIFVQVLQADGGTRA 134

Query: 57  ACINAATLALADAGIPMRD 1
           ACINAATLALADAGIPMRD
Sbjct: 135 ACINAATLALADAGIPMRD 153


>ref|XP_004961250.1| PREDICTED: exosome complex component RRP41-like [Setaria italica]
          Length = 242

 Score =  244 bits (622), Expect = 1e-62
 Identities = 122/139 (87%), Positives = 133/139 (95%), Gaps = 1/139 (0%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINN-QALVRCEY 238
           RRPN+MR+++GE+GVVA+ADGSALFEMGNT+VIAAVYGPREVQNKGQQ+N+ +ALVRCEY
Sbjct: 15  RRPNEMRKLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSKEALVRCEY 74

Query: 237 SMANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRS 58
            MA FSTGDR R+PKGDRRSTEISLVIRQTMEA IL HLMPRSQIDIFVQVLQADGGTRS
Sbjct: 75  RMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPRSQIDIFVQVLQADGGTRS 134

Query: 57  ACINAATLALADAGIPMRD 1
           ACINAATLALADAGIPMRD
Sbjct: 135 ACINAATLALADAGIPMRD 153


>ref|XP_004290319.1| PREDICTED: exosome complex component RRP41-like [Fragaria vesca
           subsp. vesca]
          Length = 241

 Score =  244 bits (622), Expect = 1e-62
 Identities = 122/138 (88%), Positives = 130/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQIR EIGVV+KADGSA+FEMGNTKVIAAVYGPREVQN+ QQ+N  ALVRCEY+
Sbjct: 14  RRPMEMRQIRAEIGVVSKADGSAMFEMGNTKVIAAVYGPREVQNRSQQLNANALVRCEYT 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTME CIL +LMPRSQIDIFVQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTNLMPRSQIDIFVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>ref|XP_002441503.1| hypothetical protein SORBIDRAFT_09g028170 [Sorghum bicolor]
           gi|241946788|gb|EES19933.1| hypothetical protein
           SORBIDRAFT_09g028170 [Sorghum bicolor]
          Length = 242

 Score =  244 bits (622), Expect = 1e-62
 Identities = 121/139 (87%), Positives = 132/139 (94%), Gaps = 1/139 (0%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQIN-NQALVRCEY 238
           RRPN+MRQ++GE+G+VA+ADGSALFEMGNT+VIAAVYGPREVQNKGQQ+N N+ALVRCEY
Sbjct: 15  RRPNEMRQLKGEVGIVARADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSNEALVRCEY 74

Query: 237 SMANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRS 58
            MA FSTGDR R+PKGDRRSTEISLVIRQTMEA IL HLMP SQIDI+VQVLQADGGTRS
Sbjct: 75  RMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQIDIYVQVLQADGGTRS 134

Query: 57  ACINAATLALADAGIPMRD 1
           ACINAATLALADAGIPMRD
Sbjct: 135 ACINAATLALADAGIPMRD 153


>ref|XP_004229977.1| PREDICTED: exosome complex component RRP41-like [Solanum
           lycopersicum]
          Length = 243

 Score =  243 bits (620), Expect = 2e-62
 Identities = 121/138 (87%), Positives = 131/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQ+R EIGVV++ADGSA FEMGNTKVIAAVYGPREV+N+ QQ+N+QALVRCEYS
Sbjct: 14  RRPMEMRQLRAEIGVVSRADGSASFEMGNTKVIAAVYGPREVKNRSQQMNDQALVRCEYS 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+ KGDRRSTEISLVIRQTMEACIL HLMPRSQIDI+VQVLQADGGTRSA
Sbjct: 74  MANFSTGDRRRKTKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIYVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>ref|XP_004143616.1| PREDICTED: exosome complex component RRP41-like [Cucumis sativus]
           gi|449516461|ref|XP_004165265.1| PREDICTED: exosome
           complex component RRP41-like [Cucumis sativus]
          Length = 241

 Score =  243 bits (620), Expect = 2e-62
 Identities = 119/138 (86%), Positives = 131/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP ++R++R EIG V+KA+GSA+FEMGNTKV+AAVYGPREVQNK QQ++NQALVRCEY+
Sbjct: 14  RRPRELREMRAEIGAVSKANGSAVFEMGNTKVLAAVYGPREVQNKSQQMSNQALVRCEYT 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTME CIL HLMPRSQIDIFVQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIFVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>ref|XP_002320845.1| exonuclease RRP41 family protein [Populus trichocarpa]
           gi|118489833|gb|ABK96716.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222861618|gb|EEE99160.1|
           exonuclease RRP41 family protein [Populus trichocarpa]
          Length = 241

 Score =  243 bits (620), Expect = 2e-62
 Identities = 121/138 (87%), Positives = 130/138 (94%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQ+R +IG VAKADGSA+FEMGNTKVIAAVYGPREVQN+ QQIN+QALVRCEYS
Sbjct: 14  RRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQQINDQALVRCEYS 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQ ME CIL +LMPRSQIDI+VQVLQADGGTRSA
Sbjct: 74  MANFSTGDRRRKPKGDRRSTEISLVIRQAMEECILTNLMPRSQIDIYVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>ref|XP_004299129.1| PREDICTED: exosome complex component RRP41-like isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 241

 Score =  242 bits (618), Expect = 3e-62
 Identities = 121/138 (87%), Positives = 129/138 (93%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINNQALVRCEYS 235
           RRP +MRQIR EIGVV+KADGSA+FEMGNTKVIAAVYGPREVQN+ QQ+N  A VRCEY+
Sbjct: 14  RRPMEMRQIRAEIGVVSKADGSAMFEMGNTKVIAAVYGPREVQNRSQQLNANAFVRCEYT 73

Query: 234 MANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRSA 55
           MANFSTGDR R+PKGDRRSTEISLVIRQTME CIL +LMPRSQIDIFVQVLQADGGTRSA
Sbjct: 74  MANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTNLMPRSQIDIFVQVLQADGGTRSA 133

Query: 54  CINAATLALADAGIPMRD 1
           CINAATLALADAGIPMRD
Sbjct: 134 CINAATLALADAGIPMRD 151


>ref|NP_001131612.1| RNase PH homolog [Zea mays] gi|194692034|gb|ACF80101.1| unknown
           [Zea mays] gi|413948419|gb|AFW81068.1| exosome complex
           exonuclease RRP41 isoform 1 [Zea mays]
           gi|413948420|gb|AFW81069.1| exosome complex exonuclease
           RRP41 isoform 2 [Zea mays] gi|413948421|gb|AFW81070.1|
           exosome complex exonuclease RRP41 isoform 3 [Zea mays]
           gi|413948422|gb|AFW81071.1| exosome complex exonuclease
           RRP41 isoform 4 [Zea mays]
          Length = 242

 Score =  242 bits (618), Expect = 3e-62
 Identities = 121/139 (87%), Positives = 132/139 (94%), Gaps = 1/139 (0%)
 Frame = -1

Query: 414 RRPNDMRQIRGEIGVVAKADGSALFEMGNTKVIAAVYGPREVQNKGQQINN-QALVRCEY 238
           RRPN+MRQ++GE+GVVA+ADGSALFEMGNT+VIAAVYGPREVQNKGQQ+N+ +ALVRCEY
Sbjct: 15  RRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKGQQVNSKEALVRCEY 74

Query: 237 SMANFSTGDRTRRPKGDRRSTEISLVIRQTMEACILVHLMPRSQIDIFVQVLQADGGTRS 58
            MA FSTGDR R+PKGDRRSTEISLVIRQTMEA IL HLMP SQIDI+VQVLQADGGTRS
Sbjct: 75  RMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQIDIYVQVLQADGGTRS 134

Query: 57  ACINAATLALADAGIPMRD 1
           ACINAATLALADAGIPMRD
Sbjct: 135 ACINAATLALADAGIPMRD 153