BLASTX nr result
ID: Zingiber25_contig00011040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00011040
(384 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|3J60|A Chain A, Localization Of The Small Subunit Ribosomal ... 176 2e-42
ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] g... 176 2e-42
gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indi... 176 2e-42
ref|XP_002463182.1| hypothetical protein SORBIDRAFT_02g039270 [S... 175 6e-42
gb|AFC88836.1| 40S ribosomal protein SA-like protein, partial [M... 174 8e-42
ref|XP_004984085.1| PREDICTED: 40S ribosomal protein SA-like [Se... 174 1e-41
gb|EMT31083.1| 40S ribosomal protein SA [Aegilops tauschii] 174 1e-41
gb|EMS60591.1| 40S ribosomal protein SA [Triticum urartu] 174 1e-41
gb|AFW89454.1| 40S ribosomal protein SA [Zea mays] 174 1e-41
ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|19470... 174 1e-41
ref|XP_004958311.1| PREDICTED: 40S ribosomal protein SA-like [Se... 173 2e-41
tpg|DAA43716.1| TPA: hypothetical protein ZEAMMB73_272794 [Zea m... 173 2e-41
ref|NP_001141003.1| acidic ribosomal protein P40 [Zea mays] gi|1... 173 2e-41
gb|EAY88799.1| hypothetical protein OsI_10272 [Oryza sativa Indi... 173 2e-41
gb|ABF94326.1| 40S ribosomal protein SA, putative, expressed [Or... 173 2e-41
gb|AAK92638.1|AC079633_18 Putative 40S Ribosomal protein [Oryza ... 173 2e-41
ref|XP_004985475.1| PREDICTED: 40S ribosomal protein SA-like [Se... 173 2e-41
gb|EMT25827.1| 40S ribosomal protein SA [Aegilops tauschii] 172 3e-41
gb|EMS59326.1| 40S ribosomal protein SA [Triticum urartu] 172 3e-41
gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indi... 172 3e-41
>pdb|3J60|A Chain A, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-em Map Of Triticum Aestivum Translating 80s
Ribosome
Length = 260
Score = 176 bits (447), Expect = 2e-42
Identities = 87/90 (96%), Positives = 89/90 (98%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A+R LSQ+EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR
Sbjct: 8 AARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 67
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 97
>ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group]
gi|33146943|dbj|BAC79991.1| putative 40S ribosomal
protein [Oryza sativa Japonica Group]
gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza sativa
Japonica Group] gi|125601085|gb|EAZ40661.1| hypothetical
protein OsJ_25132 [Oryza sativa Japonica Group]
gi|215678910|dbj|BAG96340.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215734975|dbj|BAG95697.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740977|dbj|BAG97472.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215764959|dbj|BAG86656.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 305
Score = 176 bits (447), Expect = 2e-42
Identities = 87/90 (96%), Positives = 89/90 (98%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A+R LSQ+EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR
Sbjct: 8 AARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 67
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 97
>gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indica Group]
Length = 305
Score = 176 bits (447), Expect = 2e-42
Identities = 87/90 (96%), Positives = 89/90 (98%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A+R LSQ+EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR
Sbjct: 8 AARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 67
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 97
>ref|XP_002463182.1| hypothetical protein SORBIDRAFT_02g039270 [Sorghum bicolor]
gi|241926559|gb|EER99703.1| hypothetical protein
SORBIDRAFT_02g039270 [Sorghum bicolor]
Length = 306
Score = 175 bits (443), Expect = 6e-42
Identities = 86/89 (96%), Positives = 88/89 (98%)
Frame = +2
Query: 116 SRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARV 295
+R LSQ+EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARV
Sbjct: 10 ARALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARV 69
Query: 296 IVAIENPQDIIVQSARPYGQRAVLKFAQY 382
IVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 70 IVAIENPQDIIVQSARPYGQRAVLKFAQY 98
>gb|AFC88836.1| 40S ribosomal protein SA-like protein, partial [Miscanthus
sinensis]
Length = 281
Score = 174 bits (442), Expect = 8e-42
Identities = 86/88 (97%), Positives = 87/88 (98%)
Frame = +2
Query: 119 RTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVI 298
R LSQ+EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVI
Sbjct: 1 RALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVI 60
Query: 299 VAIENPQDIIVQSARPYGQRAVLKFAQY 382
VAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 61 VAIENPQDIIVQSARPYGQRAVLKFAQY 88
>ref|XP_004984085.1| PREDICTED: 40S ribosomal protein SA-like [Setaria italica]
Length = 309
Score = 174 bits (440), Expect = 1e-41
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A R LSQKEQDIQMMLAADVHLGTKNCDFQMERYV+KRRTDGI+IINLGKTWEKLQLAAR
Sbjct: 9 APRALSQKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIFIINLGKTWEKLQLAAR 68
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 69 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 98
>gb|EMT31083.1| 40S ribosomal protein SA [Aegilops tauschii]
Length = 306
Score = 174 bits (440), Expect = 1e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +2
Query: 119 RTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVI 298
R LSQ+EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQ+AARVI
Sbjct: 9 RALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVI 68
Query: 299 VAIENPQDIIVQSARPYGQRAVLKFAQY 382
VAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 69 VAIENPQDIIVQSARPYGQRAVLKFAQY 96
>gb|EMS60591.1| 40S ribosomal protein SA [Triticum urartu]
Length = 252
Score = 174 bits (440), Expect = 1e-41
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +2
Query: 119 RTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVI 298
R LSQ+EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQ+AARVI
Sbjct: 9 RALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVI 68
Query: 299 VAIENPQDIIVQSARPYGQRAVLKFAQY 382
VAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 69 VAIENPQDIIVQSARPYGQRAVLKFAQY 96
>gb|AFW89454.1| 40S ribosomal protein SA [Zea mays]
Length = 308
Score = 174 bits (440), Expect = 1e-41
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A R LSQKEQDIQMMLAADVHLGTKNCDFQMERYV+KRRTDGIYIINLGKTW+KLQLAAR
Sbjct: 9 AVRALSQKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAAR 68
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 69 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 98
>ref|NP_001149295.1| 40S ribosomal protein SA [Zea mays] gi|194708106|gb|ACF88137.1|
unknown [Zea mays] gi|195626134|gb|ACG34897.1| 40S
ribosomal protein SA [Zea mays]
Length = 308
Score = 174 bits (440), Expect = 1e-41
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A R LSQKEQDIQMMLAADVHLGTKNCDFQMERYV+KRRTDGIYIINLGKTW+KLQLAAR
Sbjct: 9 AVRALSQKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWDKLQLAAR 68
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 69 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 98
>ref|XP_004958311.1| PREDICTED: 40S ribosomal protein SA-like [Setaria italica]
Length = 309
Score = 173 bits (439), Expect = 2e-41
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A+R LSQKE DIQMMLAADVHLGTKNCDFQMERYV+KRRTDGIYIINLGKTWEKLQLAAR
Sbjct: 9 AARALSQKELDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAAR 68
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 69 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 98
>tpg|DAA43716.1| TPA: hypothetical protein ZEAMMB73_272794 [Zea mays]
Length = 310
Score = 173 bits (439), Expect = 2e-41
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A R LSQKEQDIQMMLAADVHLGTKNCDFQMERYV+KRRTDGIYIINLGKTWEKLQLAAR
Sbjct: 10 AVRPLSQKEQDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAAR 69
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQD+IVQSARPYGQRAVLKFAQY
Sbjct: 70 VIVAIENPQDMIVQSARPYGQRAVLKFAQY 99
>ref|NP_001141003.1| acidic ribosomal protein P40 [Zea mays] gi|194702126|gb|ACF85147.1|
unknown [Zea mays] gi|413956950|gb|AFW89599.1|
hypothetical protein ZEAMMB73_104102 [Zea mays]
Length = 310
Score = 173 bits (439), Expect = 2e-41
Identities = 86/90 (95%), Positives = 87/90 (96%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A R LSQKEQDIQMMLAADVHLGTKNCDFQMERY +KRRTDGIYIINLGKTWEKLQLAAR
Sbjct: 9 AVRALSQKEQDIQMMLAADVHLGTKNCDFQMERYAFKRRTDGIYIINLGKTWEKLQLAAR 68
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 69 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 98
>gb|EAY88799.1| hypothetical protein OsI_10272 [Oryza sativa Indica Group]
Length = 305
Score = 173 bits (439), Expect = 2e-41
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A+R LSQ EQD+QMMLAADVHLGTKNCDFQMERYVYKRR+DGIYIINLGKTWEKLQLAAR
Sbjct: 8 AARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 97
>gb|ABF94326.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa
Japonica Group]
Length = 269
Score = 173 bits (439), Expect = 2e-41
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A+R LSQ EQD+QMMLAADVHLGTKNCDFQMERYVYKRR+DGIYIINLGKTWEKLQLAAR
Sbjct: 8 AARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 97
>gb|AAK92638.1|AC079633_18 Putative 40S Ribosomal protein [Oryza sativa Japonica Group]
gi|108706530|gb|ABF94325.1| 40S ribosomal protein SA,
putative, expressed [Oryza sativa Japonica Group]
gi|125585164|gb|EAZ25828.1| hypothetical protein
OsJ_09668 [Oryza sativa Japonica Group]
gi|213959144|gb|ACJ54906.1| 40S ribosomal protein [Oryza
sativa Japonica Group] gi|215678548|dbj|BAG92203.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|215737442|dbj|BAG96572.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737710|dbj|BAG96840.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740833|dbj|BAG96989.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|347737115|gb|AEP20530.1| 40S ribosomal protein [Oryza
sativa Japonica Group]
Length = 305
Score = 173 bits (439), Expect = 2e-41
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A+R LSQ EQD+QMMLAADVHLGTKNCDFQMERYVYKRR+DGIYIINLGKTWEKLQLAAR
Sbjct: 8 AARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAAR 67
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 68 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 97
>ref|XP_004985475.1| PREDICTED: 40S ribosomal protein SA-like [Setaria italica]
Length = 309
Score = 173 bits (438), Expect = 2e-41
Identities = 86/90 (95%), Positives = 87/90 (96%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A R LSQKE DIQMMLAADVHLGTKNCDFQMERYV+KRRTDGIYIINLGKTWEKLQLAAR
Sbjct: 9 APRALSQKETDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAAR 68
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 69 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 98
>gb|EMT25827.1| 40S ribosomal protein SA [Aegilops tauschii]
Length = 308
Score = 172 bits (437), Expect = 3e-41
Identities = 89/100 (89%), Positives = 91/100 (91%)
Frame = +2
Query: 83 AAGE*SCVIMASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGK 262
AAGE A R LSQKEQDIQMMLAADVHLGTKNCDFQMERY YKRR+DGIYIINLGK
Sbjct: 4 AAGE------APRALSQKEQDIQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGK 57
Query: 263 TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+
Sbjct: 58 TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQH 97
>gb|EMS59326.1| 40S ribosomal protein SA [Triticum urartu]
Length = 313
Score = 172 bits (437), Expect = 3e-41
Identities = 89/100 (89%), Positives = 91/100 (91%)
Frame = +2
Query: 83 AAGE*SCVIMASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGK 262
AAGE A R LSQKEQDIQMMLAADVHLGTKNCDFQMERY YKRR+DGIYIINLGK
Sbjct: 9 AAGE------APRALSQKEQDIQMMLAADVHLGTKNCDFQMERYAYKRRSDGIYIINLGK 62
Query: 263 TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+
Sbjct: 63 TWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQH 102
>gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group]
Length = 310
Score = 172 bits (437), Expect = 3e-41
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +2
Query: 113 ASRTLSQKEQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAAR 292
A R LSQ+EQDIQMMLAADVHLGTKNCDFQMERYVYKRR+DGI+IINLGKTWEKLQLAAR
Sbjct: 10 APRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAAR 69
Query: 293 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 382
VIVAIENPQDIIVQSARPYGQRAVLKFAQY
Sbjct: 70 VIVAIENPQDIIVQSARPYGQRAVLKFAQY 99