BLASTX nr result
ID: Zingiber25_contig00011000
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00011000
(928 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004985676.1| PREDICTED: probable lysine-specific demethyl... 72 2e-10
gb|EAZ25607.1| hypothetical protein OsJ_09434 [Oryza sativa Japo... 68 4e-09
gb|EAY88572.1| hypothetical protein OsI_10045 [Oryza sativa Indi... 68 4e-09
gb|ABF94013.1| Zinc finger, C2H2 type family protein, expressed ... 68 4e-09
ref|XP_002468494.1| hypothetical protein SORBIDRAFT_01g046870 [S... 67 7e-09
gb|AFW89665.1| hypothetical protein ZEAMMB73_575839 [Zea mays] 62 4e-07
ref|NP_001167851.1| uncharacterized protein LOC100381553 [Zea ma... 62 4e-07
ref|XP_006651047.1| PREDICTED: probable lysine-specific demethyl... 61 7e-07
ref|XP_003562074.1| PREDICTED: probable lysine-specific demethyl... 57 1e-05
>ref|XP_004985676.1| PREDICTED: probable lysine-specific demethylase ELF6-like [Setaria
italica]
Length = 1507
Score = 72.4 bits (176), Expect = 2e-10
Identities = 54/161 (33%), Positives = 71/161 (44%), Gaps = 11/161 (6%)
Frame = -2
Query: 921 KDQLTLSLGGIFSDPSPMSVVSNLKWLSKKFRTPYKVVGIVQSK--SHVANVLKYELSDR 748
+DQ LS+ +FS+PSP+SVV NLKWL +K RTPYKV+GI+ S S A +K E+
Sbjct: 844 RDQSPLSVWELFSNPSPVSVVPNLKWLCRKARTPYKVIGIITSSGTSATAEEVKPEVK-- 901
Query: 747 NNSKDVPVKITTVHHGSTVGSIGITTKHKFTCNTTPTDSTISESRMADSSG--------- 595
K TC T S ++ SG
Sbjct: 902 ----------------------------KETCTTGNVHEDDSRQHISQQSGLVQPSGLHD 933
Query: 594 GDDRRNSGAASEVSGQMIGGTSENLHNIPILIAEYPQRHLV 472
DDR N + SE + L +IPI +AEYP +H V
Sbjct: 934 SDDRENKSSCSEENDH----DRHCLIDIPIAVAEYPMKHQV 970
>gb|EAZ25607.1| hypothetical protein OsJ_09434 [Oryza sativa Japonica Group]
Length = 1471
Score = 68.2 bits (165), Expect = 4e-09
Identities = 50/151 (33%), Positives = 71/151 (47%)
Frame = -2
Query: 924 NKDQLTLSLGGIFSDPSPMSVVSNLKWLSKKFRTPYKVVGIVQSKSHVANVLKYELSDRN 745
+++Q LS G+FS PSP+SVVSNLKWL +K RTPYKV+G S VA
Sbjct: 839 SQEQPPLSFWGLFSKPSPISVVSNLKWLCRKARTPYKVIGYASSPDVVA----------- 887
Query: 744 NSKDVPVKITTVHHGSTVGSIGITTKHKFTCNTTPTDSTISESRMADSSGGDDRRNSGAA 565
P K+ + + + G ++ + T D + ES +D +
Sbjct: 888 ----TPDKVKPAVTKTQIDTSGNAHENIGSEQTLQQDCVLQES--------NDVADMCKR 935
Query: 564 SEVSGQMIGGTSENLHNIPILIAEYPQRHLV 472
+V+ Q +L NIPI +AEYP H V
Sbjct: 936 PKVNDQ----DGHSLINIPIAVAEYPMMHQV 962
>gb|EAY88572.1| hypothetical protein OsI_10045 [Oryza sativa Indica Group]
Length = 1471
Score = 68.2 bits (165), Expect = 4e-09
Identities = 50/151 (33%), Positives = 71/151 (47%)
Frame = -2
Query: 924 NKDQLTLSLGGIFSDPSPMSVVSNLKWLSKKFRTPYKVVGIVQSKSHVANVLKYELSDRN 745
+++Q LS G+FS PSP+SVVSNLKWL +K RTPYKV+G S VA
Sbjct: 839 SQEQPPLSFWGLFSKPSPISVVSNLKWLCRKARTPYKVIGYASSPDVVA----------- 887
Query: 744 NSKDVPVKITTVHHGSTVGSIGITTKHKFTCNTTPTDSTISESRMADSSGGDDRRNSGAA 565
P K+ + + + G ++ + T D + ES +D +
Sbjct: 888 ----TPDKVKPAVTKTQIDTSGNAHENIGSEQTLQQDCVLQES--------NDVADMCKR 935
Query: 564 SEVSGQMIGGTSENLHNIPILIAEYPQRHLV 472
+V+ Q +L NIPI +AEYP H V
Sbjct: 936 PKVNDQ----DGHSLINIPIAVAEYPMMHQV 962
>gb|ABF94013.1| Zinc finger, C2H2 type family protein, expressed [Oryza sativa
Japonica Group]
Length = 666
Score = 68.2 bits (165), Expect = 4e-09
Identities = 50/151 (33%), Positives = 71/151 (47%)
Frame = -2
Query: 924 NKDQLTLSLGGIFSDPSPMSVVSNLKWLSKKFRTPYKVVGIVQSKSHVANVLKYELSDRN 745
+++Q LS G+FS PSP+SVVSNLKWL +K RTPYKV+G S VA
Sbjct: 18 SQEQPPLSFWGLFSKPSPISVVSNLKWLCRKARTPYKVIGYASSPDVVA----------- 66
Query: 744 NSKDVPVKITTVHHGSTVGSIGITTKHKFTCNTTPTDSTISESRMADSSGGDDRRNSGAA 565
P K+ + + + G ++ + T D + ES +D +
Sbjct: 67 ----TPDKVKPAVTKTQIDTSGNAHENIGSEQTLQQDCVLQES--------NDVADMCKR 114
Query: 564 SEVSGQMIGGTSENLHNIPILIAEYPQRHLV 472
+V+ Q +L NIPI +AEYP H V
Sbjct: 115 PKVNDQ----DGHSLINIPIAVAEYPMMHQV 141
>ref|XP_002468494.1| hypothetical protein SORBIDRAFT_01g046870 [Sorghum bicolor]
gi|241922348|gb|EER95492.1| hypothetical protein
SORBIDRAFT_01g046870 [Sorghum bicolor]
Length = 898
Score = 67.4 bits (163), Expect = 7e-09
Identities = 50/151 (33%), Positives = 67/151 (44%)
Frame = -2
Query: 924 NKDQLTLSLGGIFSDPSPMSVVSNLKWLSKKFRTPYKVVGIVQSKSHVANVLKYELSDRN 745
N++Q LS GG+FS PSP+SVV NLKWL K+ RTPY V+GIV+S S
Sbjct: 267 NQEQSPLSFGGLFSCPSPVSVVPNLKWLCKRARTPYTVIGIVRSSS-------------- 312
Query: 744 NSKDVPVKITTVHHGSTVGSIGITTKHKFTCNTTPTDSTISESRMADSSGGDDRRNSGAA 565
+ + PV++ G G + + C T +S + D +
Sbjct: 313 -ATETPVELKP---GVETGMV----TNGNVCEDDSRQHTFRQSGLEQPGELQDCDKPSCS 364
Query: 564 SEVSGQMIGGTSENLHNIPILIAEYPQRHLV 472
E L NIPI +AEYP H V
Sbjct: 365 EEND-----HGRHCLVNIPIAVAEYPMMHQV 390
>gb|AFW89665.1| hypothetical protein ZEAMMB73_575839 [Zea mays]
Length = 1522
Score = 61.6 bits (148), Expect = 4e-07
Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 2/153 (1%)
Frame = -2
Query: 924 NKDQLTLSLGGIFSDPSPMSVVSNLKWLSKKFRTPYKVVGIVQSKSHVANVLKYELSDRN 745
N++Q L GG+ S PSP+SVV NLKWL K+ RTPY V+G ++ S A + +
Sbjct: 867 NQEQSPLPFGGLLSCPSPVSVVPNLKWLCKRARTPYTVIGTMRGSSATATAAELK----- 921
Query: 744 NSKDVPVKITTVHHGSTVGSIGITTKHKFTCNTTPTDSTISESRMA--DSSGGDDRRNSG 571
G+ T+ N D+ R + GG +
Sbjct: 922 --------------------PGVKTEIFTNGNVCEDDNRHHSFRQTGLEQPGGLQDCDKP 961
Query: 570 AASEVSGQMIGGTSENLHNIPILIAEYPQRHLV 472
+ SE +G L NIPI +AEYP H V
Sbjct: 962 SCSEENGH----GRHCLVNIPIAVAEYPMMHQV 990
>ref|NP_001167851.1| uncharacterized protein LOC100381553 [Zea mays]
gi|223944427|gb|ACN26297.1| unknown [Zea mays]
Length = 1171
Score = 61.6 bits (148), Expect = 4e-07
Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 2/153 (1%)
Frame = -2
Query: 924 NKDQLTLSLGGIFSDPSPMSVVSNLKWLSKKFRTPYKVVGIVQSKSHVANVLKYELSDRN 745
N++Q L GG+ S PSP+SVV NLKWL K+ RTPY V+G ++ S A + +
Sbjct: 516 NQEQSPLPFGGLLSCPSPVSVVPNLKWLCKRARTPYTVIGTMRGSSATATAAELK----- 570
Query: 744 NSKDVPVKITTVHHGSTVGSIGITTKHKFTCNTTPTDSTISESRMA--DSSGGDDRRNSG 571
G+ T+ N D+ R + GG +
Sbjct: 571 --------------------PGVKTEIFTNGNVCEDDNRHHSFRQTGLEQPGGLQDCDKP 610
Query: 570 AASEVSGQMIGGTSENLHNIPILIAEYPQRHLV 472
+ SE +G L NIPI +AEYP H V
Sbjct: 611 SCSEENGH----GRHCLVNIPIAVAEYPMMHQV 639
>ref|XP_006651047.1| PREDICTED: probable lysine-specific demethylase ELF6-like, partial
[Oryza brachyantha]
Length = 1478
Score = 60.8 bits (146), Expect = 7e-07
Identities = 51/164 (31%), Positives = 70/164 (42%), Gaps = 1/164 (0%)
Frame = -2
Query: 924 NKDQLTLSLGGIFSDPSPMSVVSNLKWLSKKFRTPYKVVGIVQSKSHVANVLKYELSDRN 745
++ Q LS G+FS PSP+SVV NLKWL +K RTPYKVVG S VA
Sbjct: 811 SQKQPPLSFWGLFSKPSPISVVPNLKWLCRKARTPYKVVGYTSSPDVVA----------- 859
Query: 744 NSKDVPVKITTVHHGSTVGSIGITTKHKFTCNTTPTDSTISE-SRMADSSGGDDRRNSGA 568
P K+ S + + ++ + T + E S +AD S +
Sbjct: 860 ----APDKVKPAVTKSPIDTADNAHENVKSEQTLQKVCVLKETSDVADMSCCPKENDQDG 915
Query: 567 ASEVSGQMIGGTSENLHNIPILIAEYPQRHLVDQVILEVRKYSE 436
S L NIPI +AEYP H V + + V + +
Sbjct: 916 HS-------------LINIPIAVAEYPMMHQVCEGPVSVSSFDD 946
>ref|XP_003562074.1| PREDICTED: probable lysine-specific demethylase ELF6-like
[Brachypodium distachyon]
Length = 1396
Score = 57.0 bits (136), Expect = 1e-05
Identities = 45/136 (33%), Positives = 64/136 (47%)
Frame = -2
Query: 879 PSPMSVVSNLKWLSKKFRTPYKVVGIVQSKSHVANVLKYELSDRNNSKDVPVKITTVHHG 700
PSP+SVV NLKWL +K RTPYKVVG V S + + K P I T
Sbjct: 731 PSPISVVPNLKWLCRKTRTPYKVVGYVSSPNAAV----------THEKINPAVIKT---- 776
Query: 699 STVGSIGITTKHKFTCNTTPTDSTISESRMADSSGGDDRRNSGAASEVSGQMIGGTSENL 520
+G+ G ++ T D+ + +R+ ++ DD + SE + + L
Sbjct: 777 -EMGTSGSAHENGEKQGTAQQDAPLQPTRLQEA---DDLTDVLTCSEENDK----DMHCL 828
Query: 519 HNIPILIAEYPQRHLV 472
+IPI +AEYP H V
Sbjct: 829 IDIPIALAEYPMMHQV 844