BLASTX nr result
ID: Zingiber25_contig00010942
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00010942
(1302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302112.2| Ribosome recycling factor family protein [Po... 325 3e-86
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides] 323 1e-85
gb|EOX94754.1| Ribosome recycling factor isoform 1 [Theobroma ca... 319 1e-84
emb|CBI28691.3| unnamed protein product [Vitis vinifera] 317 7e-84
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro... 314 4e-83
gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea] 310 6e-82
ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloro... 310 6e-82
ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citr... 309 1e-81
gb|EOX94755.1| Ribosome recycling factor isoform 2 [Theobroma ca... 306 1e-80
ref|XP_006838265.1| hypothetical protein AMTR_s00103p00070570 [A... 306 2e-80
ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloro... 305 4e-80
gb|ESW16632.1| hypothetical protein PHAVU_007G172400g [Phaseolus... 304 6e-80
ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloro... 303 1e-79
gb|EXB39377.1| Ribosome-recycling factor [Morus notabilis] 301 3e-79
ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycin... 301 3e-79
ref|XP_004495199.1| PREDICTED: ribosome-recycling factor, chloro... 301 5e-79
gb|AFK38022.1| unknown [Medicago truncatula] 300 1e-78
ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatu... 300 1e-78
sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, ... 294 6e-77
gb|ABK26473.1| unknown [Picea sitchensis] 292 2e-76
>ref|XP_002302112.2| Ribosome recycling factor family protein [Populus trichocarpa]
gi|550344331|gb|EEE81385.2| Ribosome recycling factor
family protein [Populus trichocarpa]
Length = 286
Score = 325 bits (832), Expect = 3e-86
Identities = 176/272 (64%), Positives = 208/272 (76%), Gaps = 10/272 (3%)
Frame = +1
Query: 124 SLRAPGLSPSRTLCVRIPENVHNGNMY----------THLSSWSSSFTYSILKEGTTAFF 273
S+ P +P + L + +P + H G T +S WSSS YS L+ G+T
Sbjct: 16 SIFQPNPNPPKAL-LSLPGSFHRGPHRAKVCYNSIGATSVSLWSSSANYSSLRNGSTKLS 74
Query: 274 CKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRMERTIETVRTSFNAVRTGRAN 453
K + + + R+G+++ ATIEEIEAEK +IE DA+ RME+TI+T+R +FN+VRTGRAN
Sbjct: 75 GKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRANFNSVRTGRAN 134
Query: 454 PSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSSLKTIEKAIVSSDIGLTPNN 633
PSMLD++EVEYYGTPVSLKSIAQISTPD S+LLVQPYDKSSLK IEKAIVSSD+GLTPNN
Sbjct: 135 PSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGLTPNN 194
Query: 634 DGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRDANKAYXXXXXXXXXXXDNV 813
DGEVIR+SIPQLTSERRKELSK+VAKL EEGKVA+RNIRRDA KAY DNV
Sbjct: 195 DGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKAYEKLEKEKKLSEDNV 254
Query: 814 KDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
KDLSSDLQKLTD+YMKK+D I KQKEKELL V
Sbjct: 255 KDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286
>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 286
Score = 323 bits (828), Expect = 1e-85
Identities = 168/233 (72%), Positives = 195/233 (83%)
Frame = +1
Query: 211 LSSWSSSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDR 390
+S WSSS YS L+ G++ K + + + R+G+++ ATIEEIEAEK +IE DA+ R
Sbjct: 54 VSLWSSSANYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGR 113
Query: 391 MERTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDK 570
ME+TI+T+RT+FN+VRTGRANPSMLD++EVEYYGTPVSLKSIAQISTPD S+LLVQPYDK
Sbjct: 114 MEKTIDTMRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDK 173
Query: 571 SSLKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIR 750
SSLK IEKAIVSSD+GLTPNNDGEVIR+SIPQLTSERRKELSK+VAKL EEGKVA+RNIR
Sbjct: 174 SSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIR 233
Query: 751 RDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
RDA KAY DNVKDLSSDLQKLTD+YMKK+D I KQKEKELL V
Sbjct: 234 RDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286
>gb|EOX94754.1| Ribosome recycling factor isoform 1 [Theobroma cacao]
Length = 277
Score = 319 bits (818), Expect = 1e-84
Identities = 166/231 (71%), Positives = 193/231 (83%)
Frame = +1
Query: 217 SWSSSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRME 396
SWSS+ Y+ L+ G + K ++R G+++CATIEEIEAEK IEKDA+ RME
Sbjct: 50 SWSSAANYARLRHGASKLSGKPF---VVLRKRAGVLRCATIEEIEAEKSSIEKDAKARME 106
Query: 397 RTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSS 576
+TIETVRT+FN++RTGRANP++LD+VEVEYYGTPVSLKSIAQISTPD S+LLVQPYDKSS
Sbjct: 107 KTIETVRTNFNSIRTGRANPAILDKVEVEYYGTPVSLKSIAQISTPDSSSLLVQPYDKSS 166
Query: 577 LKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRD 756
LK IEKAIV+SD+G+TPNNDGEVIRLS+PQLT+ERRKELSKVVAK EEGKVA+RNIRRD
Sbjct: 167 LKAIEKAIVNSDLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRNIRRD 226
Query: 757 ANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
A KAY DNVKDLSSDLQKLTD+YMKK+D+I KQKEKELLTV
Sbjct: 227 ALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIFKQKEKELLTV 277
>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
Length = 274
Score = 317 bits (812), Expect = 7e-84
Identities = 165/228 (72%), Positives = 189/228 (82%)
Frame = +1
Query: 226 SSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRMERTI 405
S+ Y L +G + K ++F++R GI +CATIEEIEAEK IEKD ++RME+TI
Sbjct: 47 SAANYVRLGDGAREYSGKLFVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTI 106
Query: 406 ETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSSLKT 585
ETVRT+FN++RTGRANP++LDRVEVEYYGTPVSLKSIAQISTPD ++LLVQPYDKSSLK
Sbjct: 107 ETVRTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKV 166
Query: 586 IEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRDANK 765
IEKAIVSSD+GLTPNNDGEVIRLS+PQLTSERRKELSKVVAK TEEGKVA+RNIRRDA K
Sbjct: 167 IEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALK 226
Query: 766 AYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
AY DNVKDLSSDLQKL D+YMKK++ I KQKEKELL V
Sbjct: 227 AYEKLEKDKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 274
>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 314 bits (805), Expect = 4e-83
Identities = 160/239 (66%), Positives = 192/239 (80%)
Frame = +1
Query: 193 GNMYTHLSSWSSSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIE 372
G++ HL SW S+ Y L + + FK R+ +++ ATIEEIEAEK +IE
Sbjct: 40 GSITAHLCSWKSASNYVRLNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIE 99
Query: 373 KDARDRMERTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLL 552
KD + RME+TI+TVR++FN++RTGR+NP+MLD++EVEYYG+PVSLKSIAQISTPD S+LL
Sbjct: 100 KDVKARMEKTIDTVRSNFNSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLL 159
Query: 553 VQPYDKSSLKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKV 732
VQPYDKSSLK+IEKAIV+SD+G+TPNNDGEVIRL++PQLTSERRKELSKVVAK EEGKV
Sbjct: 160 VQPYDKSSLKSIEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKV 219
Query: 733 AIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
A+RNIRRDA KAY DNVKDLSSDLQKLTDDYMKK+D + KQKEKELL V
Sbjct: 220 AVRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV 278
>gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]
Length = 278
Score = 310 bits (795), Expect = 6e-82
Identities = 165/233 (70%), Positives = 186/233 (79%), Gaps = 2/233 (0%)
Frame = +1
Query: 217 SWSSSFTYSILKEGTTAFFCKN--LGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDR 390
SW+SS +Y LK L RR GI++ ATIEEIEAEK IEKD + R
Sbjct: 46 SWASSSSYVTLKLSNAFRVSARPLLSKGTLLHRRMGIVRAATIEEIEAEKAAIEKDVKIR 105
Query: 391 MERTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDK 570
MER+IE+VR +FN++RTGRANP+MLD++EVEYYG+PVSLKSIAQISTPD S+LLVQPYDK
Sbjct: 106 MERSIESVRANFNSIRTGRANPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDK 165
Query: 571 SSLKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIR 750
SSLK IEKAIVSSD+G+TPNNDGEVIRL++PQLTSERRKELSKVVAK EEGKVA+RNIR
Sbjct: 166 SSLKAIEKAIVSSDVGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVALRNIR 225
Query: 751 RDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
RDA KAY DNVKDLSSDLQKLTD+YMKKVD I KQKEKELLTV
Sbjct: 226 RDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKELLTV 278
>ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Vitis
vinifera]
Length = 280
Score = 310 bits (795), Expect = 6e-82
Identities = 165/236 (69%), Positives = 190/236 (80%), Gaps = 8/236 (3%)
Frame = +1
Query: 226 SSFTYSILKEGTTAFFCKNLGNNKHFKRRK--------GIIKCATIEEIEAEKLVIEKDA 381
S+ Y L +G + K ++F++R+ GI +CATIEEIEAEK IEKD
Sbjct: 45 SAANYVRLGDGAREYSGKLFVAKRNFQKRQVESYGYKTGIFRCATIEEIEAEKSSIEKDV 104
Query: 382 RDRMERTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQP 561
++RME+TIETVRT+FN++RTGRANP++LDRVEVEYYGTPVSLKSIAQISTPD ++LLVQP
Sbjct: 105 KERMEKTIETVRTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQP 164
Query: 562 YDKSSLKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIR 741
YDKSSLK IEKAIVSSD+GLTPNNDGEVIRLS+PQLTSERRKELSKVVAK TEEGKVA+R
Sbjct: 165 YDKSSLKVIEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALR 224
Query: 742 NIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
NIRRDA KAY DNVKDLSSDLQKL D+YMKK++ I KQKEKELL V
Sbjct: 225 NIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 280
>ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
gi|568852089|ref|XP_006479713.1| PREDICTED:
ribosome-recycling factor, chloroplastic-like [Citrus
sinensis] gi|557546326|gb|ESR57304.1| hypothetical
protein CICLE_v10021605mg [Citrus clementina]
Length = 276
Score = 309 bits (792), Expect = 1e-81
Identities = 160/231 (69%), Positives = 190/231 (82%), Gaps = 1/231 (0%)
Frame = +1
Query: 220 WSSSFTYS-ILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRME 396
WSS+ YS ++K + L + +R G+++CATIEEIEAEK IEKD + RME
Sbjct: 51 WSSAANYSRLVKLSNKPIVVRQLAH-----KRNGVVRCATIEEIEAEKSSIEKDVKARME 105
Query: 397 RTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSS 576
RTI+ VRT+FN+VRTGR+NP+MLD++EVEYYG+PVSLKSIAQI+TPD S+LL+QPYDKSS
Sbjct: 106 RTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSS 165
Query: 577 LKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRD 756
LK+IEKAIVSSD+G+TPNNDGEVIRL++PQLTSERRKELSKVVAK EEGKVA+RNIRRD
Sbjct: 166 LKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRD 225
Query: 757 ANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
A KAY DNVKDLSSDLQKLTD+YMKK+D+I KQKEKELL V
Sbjct: 226 ALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQKEKELLKV 276
>gb|EOX94755.1| Ribosome recycling factor isoform 2 [Theobroma cacao]
Length = 300
Score = 306 bits (784), Expect = 1e-80
Identities = 166/254 (65%), Positives = 193/254 (75%), Gaps = 23/254 (9%)
Frame = +1
Query: 217 SWSSSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRME 396
SWSS+ Y+ L+ G + K ++R G+++CATIEEIEAEK IEKDA+ RME
Sbjct: 50 SWSSAANYARLRHGASKLSGKPF---VVLRKRAGVLRCATIEEIEAEKSSIEKDAKARME 106
Query: 397 RTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSS 576
+TIETVRT+FN++RTGRANP++LD+VEVEYYGTPVSLKSIAQISTPD S+LLVQPYDKSS
Sbjct: 107 KTIETVRTNFNSIRTGRANPAILDKVEVEYYGTPVSLKSIAQISTPDSSSLLVQPYDKSS 166
Query: 577 LKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRD 756
LK IEKAIV+SD+G+TPNNDGEVIRLS+PQLT+ERRKELSKVVAK EEGKVA+RNIRRD
Sbjct: 167 LKAIEKAIVNSDLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRNIRRD 226
Query: 757 ANKAYXXXXXXXXXXXDNVKDLSSDL-----------------------QKLTDDYMKKV 867
A KAY DNVKDLSSDL QKLTD+YMKK+
Sbjct: 227 ALKAYEKLEKEKKLSEDNVKDLSSDLQISQLGGLQIPLSTQVCEIFSFMQKLTDEYMKKI 286
Query: 868 DAIQKQKEKELLTV 909
D+I KQKEKELLTV
Sbjct: 287 DSIFKQKEKELLTV 300
>ref|XP_006838265.1| hypothetical protein AMTR_s00103p00070570 [Amborella trichopoda]
gi|548840733|gb|ERN00834.1| hypothetical protein
AMTR_s00103p00070570 [Amborella trichopoda]
Length = 273
Score = 306 bits (783), Expect = 2e-80
Identities = 160/229 (69%), Positives = 186/229 (81%)
Frame = +1
Query: 223 SSSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRMERT 402
SSS Y G FF +++ N++ RR G +CATIEEIEAEK +IE +A+DRME+T
Sbjct: 45 SSSSNYGKSLLGPRNFFERSIPVNRNTNRRMGFCRCATIEEIEAEKSMIESEAKDRMEKT 104
Query: 403 IETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSSLK 582
IET+R +FNAVRTGRA+P+MLDRVEVEYYGTPVSLKSIAQISTPDGS+LLVQP+DKS LK
Sbjct: 105 IETIRGNFNAVRTGRASPAMLDRVEVEYYGTPVSLKSIAQISTPDGSSLLVQPFDKSCLK 164
Query: 583 TIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRDAN 762
IEKAIV SD+ +TPNNDGEVIRL+IP LTSERRK+L K+VAK EEGKVAIRNIRRDA
Sbjct: 165 DIEKAIVKSDLDVTPNNDGEVIRLNIPPLTSERRKDLLKIVAKQAEEGKVAIRNIRRDAI 224
Query: 763 KAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
KAY DNVKDLSSDLQK+TD Y+KK+D+I KQKEKEL+TV
Sbjct: 225 KAYEKLEKEKKLSEDNVKDLSSDLQKVTDGYVKKIDSIYKQKEKELMTV 273
>ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
tuberosum]
Length = 267
Score = 305 bits (780), Expect = 4e-80
Identities = 156/230 (67%), Positives = 187/230 (81%)
Frame = +1
Query: 220 WSSSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRMER 399
WS+S YS L G + +R GI++CATIEEIEAEK IEKD ++RME+
Sbjct: 41 WSASANYSSLWVGARRL---QPLVKPSWGKRSGIVRCATIEEIEAEKSSIEKDVKERMEK 97
Query: 400 TIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSSL 579
T+ETVR++FN++RTGRA+P+MLD++EV+YYGTPVSLKSIAQISTPD S++LVQPYDKSSL
Sbjct: 98 TVETVRSNFNSIRTGRASPAMLDKIEVDYYGTPVSLKSIAQISTPDASSILVQPYDKSSL 157
Query: 580 KTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRDA 759
K IEKAIVSSD+G+TPNNDGEVIRL++PQLTS+RRKELSK+V+K EEGKVAIRNIRRDA
Sbjct: 158 KAIEKAIVSSDVGMTPNNDGEVIRLAVPQLTSDRRKELSKIVSKQAEEGKVAIRNIRRDA 217
Query: 760 NKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
KAY DNVKDLSSDLQK+TD+YMKK+D + KQKEKELL V
Sbjct: 218 LKAYEKLEKEKKLSEDNVKDLSSDLQKVTDEYMKKIDTVFKQKEKELLKV 267
>gb|ESW16632.1| hypothetical protein PHAVU_007G172400g [Phaseolus vulgaris]
Length = 266
Score = 304 bits (778), Expect = 6e-80
Identities = 163/232 (70%), Positives = 187/232 (80%), Gaps = 1/232 (0%)
Frame = +1
Query: 217 SWSSSFTYSILKEGTTAFFCKNLGNNKHFK-RRKGIIKCATIEEIEAEKLVIEKDARDRM 393
S+SSS +Y+ LK + +K F RR +I+ ATIEEIEAEK IE DA+ RM
Sbjct: 35 SFSSSASYATLKLPLGFSLSRTPLISKGFSHRRTPLIRAATIEEIEAEKAAIENDAKSRM 94
Query: 394 ERTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKS 573
ER+I+ VRT+FN++RTGRANP+MLD++EVEYYGTPVSLKSIAQISTPD S+LLVQPYDKS
Sbjct: 95 ERSIDNVRTNFNSIRTGRANPAMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKS 154
Query: 574 SLKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRR 753
SLK IEKAIVSSD+G+TPNNDGE IRLSIPQLTS+RRKELSK+VAK EEGKVA+RNIRR
Sbjct: 155 SLKAIEKAIVSSDLGMTPNNDGESIRLSIPQLTSDRRKELSKIVAKQAEEGKVALRNIRR 214
Query: 754 DANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
DA KAY DNVKD SSDLQKLTDDY+KKV+ I KQKEKELLTV
Sbjct: 215 DALKAYDKLEKEKKLSEDNVKDFSSDLQKLTDDYIKKVETILKQKEKELLTV 266
>ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 1
[Solanum lycopersicum]
Length = 267
Score = 303 bits (776), Expect = 1e-79
Identities = 155/230 (67%), Positives = 187/230 (81%)
Frame = +1
Query: 220 WSSSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRMER 399
WS+S YS L G + +R GI++CATIEEIEAEK IEKD ++RME+
Sbjct: 41 WSASANYSSLWVGARRL---QPLVKPSWGKRSGIVRCATIEEIEAEKSSIEKDVKERMEK 97
Query: 400 TIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSSL 579
T+ETVR++FN++RTGRA+P+MLD++EV+YYGTPVSLKSIAQISTPD +++LVQPYDKSSL
Sbjct: 98 TVETVRSNFNSIRTGRASPAMLDKIEVDYYGTPVSLKSIAQISTPDATSILVQPYDKSSL 157
Query: 580 KTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRDA 759
K IEKAIVSSD+G+TPNNDGEVIRL++PQLTS+RRKELSK+V+K EEGKVAIRNIRRDA
Sbjct: 158 KAIEKAIVSSDVGMTPNNDGEVIRLAVPQLTSDRRKELSKIVSKQAEEGKVAIRNIRRDA 217
Query: 760 NKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
KAY DNVKDLSSDLQK+TD+YMKK+D + KQKEKELL V
Sbjct: 218 LKAYEKLEKEKKLSEDNVKDLSSDLQKVTDEYMKKIDIVFKQKEKELLKV 267
>gb|EXB39377.1| Ribosome-recycling factor [Morus notabilis]
Length = 312
Score = 301 bits (772), Expect = 3e-79
Identities = 155/229 (67%), Positives = 187/229 (81%)
Frame = +1
Query: 208 HLSSWSSSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARD 387
++ SW S+ +Y L++GT + G+++ ATIEEIEAEK +IEKD ++
Sbjct: 48 NVCSWGSAASYVRLRDGTD---------------KVGVVRAATIEEIEAEKSLIEKDVKE 92
Query: 388 RMERTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYD 567
RME++IETVRT+FN+VRTGRANP+MLD++EVEYYG+PVSLKSIAQISTPD S+LLVQPYD
Sbjct: 93 RMEKSIETVRTNFNSVRTGRANPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYD 152
Query: 568 KSSLKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNI 747
KSSLK IEKAIVSSD+G+TPNNDG+VIRL++PQLTSERRKELSKVVAK TEEGKVA+RNI
Sbjct: 153 KSSLKVIEKAIVSSDLGMTPNNDGDVIRLTLPQLTSERRKELSKVVAKQTEEGKVALRNI 212
Query: 748 RRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEK 894
RRDA KAY DNVKDLSSDLQKLTD+YMKK++ + KQKEK
Sbjct: 213 RRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKIETLFKQKEK 261
>ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycine max]
gi|255638439|gb|ACU19529.1| unknown [Glycine max]
Length = 261
Score = 301 bits (772), Expect = 3e-79
Identities = 154/202 (76%), Positives = 176/202 (87%)
Frame = +1
Query: 304 KRRKGIIKCATIEEIEAEKLVIEKDARDRMERTIETVRTSFNAVRTGRANPSMLDRVEVE 483
K R +++ ATIEEIEAEK IEKDA+ RM+RTI+ VRT+F+++RTGRANPSMLD+++VE
Sbjct: 60 KGRTTLVRAATIEEIEAEKAAIEKDAKTRMDRTIDNVRTNFSSIRTGRANPSMLDKIQVE 119
Query: 484 YYGTPVSLKSIAQISTPDGSTLLVQPYDKSSLKTIEKAIVSSDIGLTPNNDGEVIRLSIP 663
YYG+PVSLKSIAQISTPD S+LLVQPYDKSSLK IEKAIVSSD+G+TPNNDGE+IRLSIP
Sbjct: 120 YYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGMTPNNDGELIRLSIP 179
Query: 664 QLTSERRKELSKVVAKLTEEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKL 843
QLTS+RRKELSK+VAK EEGKVA+RNIRRDA KAY DNVKDLSSDLQKL
Sbjct: 180 QLTSDRRKELSKIVAKQAEEGKVALRNIRRDALKAYDKLEKEKKLSEDNVKDLSSDLQKL 239
Query: 844 TDDYMKKVDAIQKQKEKELLTV 909
TD+YMKKVD I KQKEKELLTV
Sbjct: 240 TDEYMKKVDTIFKQKEKELLTV 261
>ref|XP_004495199.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cicer
arietinum]
Length = 265
Score = 301 bits (770), Expect = 5e-79
Identities = 150/201 (74%), Positives = 178/201 (88%)
Frame = +1
Query: 307 RRKGIIKCATIEEIEAEKLVIEKDARDRMERTIETVRTSFNAVRTGRANPSMLDRVEVEY 486
+RKGI++ ATIEEIEAEK IE D ++RMERT+E VRT+F+++RTGRANPSMLD++EVEY
Sbjct: 65 KRKGIVRAATIEEIEAEKASIENDVKNRMERTLENVRTNFSSIRTGRANPSMLDKIEVEY 124
Query: 487 YGTPVSLKSIAQISTPDGSTLLVQPYDKSSLKTIEKAIVSSDIGLTPNNDGEVIRLSIPQ 666
YG+PVSLKSIAQISTPD S+LL+QPYDKSSLK IEKAIV+S++G+TPNNDG++IRL+IPQ
Sbjct: 125 YGSPVSLKSIAQISTPDASSLLIQPYDKSSLKAIEKAIVASNLGMTPNNDGDLIRLNIPQ 184
Query: 667 LTSERRKELSKVVAKLTEEGKVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLT 846
LTS+RRKEL+K+V+K EEGKVA+RNIRRDA KAY DNVKDLSSDLQKLT
Sbjct: 185 LTSDRRKELTKIVSKQVEEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLT 244
Query: 847 DDYMKKVDAIQKQKEKELLTV 909
DDY+KKVDAI KQKEKELLTV
Sbjct: 245 DDYIKKVDAIYKQKEKELLTV 265
>gb|AFK38022.1| unknown [Medicago truncatula]
Length = 262
Score = 300 bits (767), Expect = 1e-78
Identities = 159/241 (65%), Positives = 188/241 (78%), Gaps = 8/241 (3%)
Frame = +1
Query: 211 LSSWSSSFTYSILKEGTTAFFCKNLGNNKH--------FKRRKGIIKCATIEEIEAEKLV 366
L S SSFT +K +T K G+ +H RKG ++ ATIEEIEAEK
Sbjct: 25 LLSAHSSFT---IKRSSTYVTLKLSGSGRHSLSKGLLTLHTRKGFVRAATIEEIEAEKAS 81
Query: 367 IEKDARDRMERTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGST 546
IE D + RMERT++ V+T+F+++RTGRA PSMLD++EVEYYG+PVSLK+IAQISTPD S+
Sbjct: 82 IENDVKSRMERTLDNVKTNFSSIRTGRATPSMLDKIEVEYYGSPVSLKTIAQISTPDASS 141
Query: 547 LLVQPYDKSSLKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEG 726
LLV PYDKSSLK IEKAIV+SD+G+TPNNDGEVIRLSIPQLTS+RRKEL+K+V+K EEG
Sbjct: 142 LLVSPYDKSSLKAIEKAIVNSDVGMTPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEG 201
Query: 727 KVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLT 906
KVA+RNIRRDA KAY DNVKDLSSDLQKLTDDY+KKVDA+ KQKEKELLT
Sbjct: 202 KVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKELLT 261
Query: 907 V 909
V
Sbjct: 262 V 262
>ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatula]
gi|217072182|gb|ACJ84451.1| unknown [Medicago
truncatula] gi|217072782|gb|ACJ84751.1| unknown
[Medicago truncatula] gi|355479687|gb|AES60890.1|
Ribosome-recycling factor [Medicago truncatula]
Length = 262
Score = 300 bits (767), Expect = 1e-78
Identities = 159/241 (65%), Positives = 188/241 (78%), Gaps = 8/241 (3%)
Frame = +1
Query: 211 LSSWSSSFTYSILKEGTTAFFCKNLGNNKH--------FKRRKGIIKCATIEEIEAEKLV 366
L S SSFT +K +T K G+ +H RKG ++ ATIEEIEAEK
Sbjct: 25 LLSAHSSFT---IKRSSTYVTLKLSGSGRHSLSKGLLTLHTRKGFVRAATIEEIEAEKAS 81
Query: 367 IEKDARDRMERTIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGST 546
IE D + RMERT++ V+T+F+++RTGRA PSMLD++EVEYYG+PVSLK+IAQISTPD S+
Sbjct: 82 IENDVKSRMERTLDNVKTNFSSIRTGRATPSMLDKIEVEYYGSPVSLKTIAQISTPDASS 141
Query: 547 LLVQPYDKSSLKTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEG 726
LLV PYDKSSLK IEKAIV+SD+G+TPNNDGEVIRLSIPQLTS+RRKEL+K+V+K EEG
Sbjct: 142 LLVSPYDKSSLKAIEKAIVNSDVGMTPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEG 201
Query: 727 KVAIRNIRRDANKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLT 906
KVA+RNIRRDA KAY DNVKDLSSDLQKLTDDY+KKVDA+ KQKEKELLT
Sbjct: 202 KVALRNIRRDALKAYEKLEKDKKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKELLT 261
Query: 907 V 909
V
Sbjct: 262 V 262
>sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=Nuclear located protein D2; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor
Length = 227
Score = 294 bits (752), Expect = 6e-77
Identities = 150/230 (65%), Positives = 186/230 (80%)
Frame = +1
Query: 220 WSSSFTYSILKEGTTAFFCKNLGNNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRMER 399
W+++ Y +K GT F K + ++ +R G +KCAT+EEIEAEK +IEK ++RME+
Sbjct: 1 WTAAANYVKIKVGTGKFARKTVVLSQ---KRTGTLKCATMEEIEAEKSLIEKSVKERMEK 57
Query: 400 TIETVRTSFNAVRTGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSSL 579
TIE V+ SFN++RT R+NP MLD+++VEYYGTP SLKSIAQISTPD S+LLV PYDKSSL
Sbjct: 58 TIENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSL 117
Query: 580 KTIEKAIVSSDIGLTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRDA 759
K IEKAIV+SD+G+TPNNDG+VIRLSIPQLT++RRKELSK+VAK EEGKVA+RNIRRDA
Sbjct: 118 KDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALRNIRRDA 177
Query: 760 NKAYXXXXXXXXXXXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
K+Y DNVKDLSSDLQK+ D+Y+KKVD+I KQKEKEL+TV
Sbjct: 178 IKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIFKQKEKELMTV 227
>gb|ABK26473.1| unknown [Picea sitchensis]
Length = 279
Score = 292 bits (747), Expect = 2e-76
Identities = 148/217 (68%), Positives = 182/217 (83%), Gaps = 3/217 (1%)
Frame = +1
Query: 268 FFCKNLG---NNKHFKRRKGIIKCATIEEIEAEKLVIEKDARDRMERTIETVRTSFNAVR 438
FF K+L ++K R G+ +CATIEEIEAEK +IE+DA +RME+T+ET++T+FN++R
Sbjct: 63 FFGKSLSVTFSHKERNVRTGVCRCATIEEIEAEKQLIEEDAIERMEKTLETIKTNFNSIR 122
Query: 439 TGRANPSMLDRVEVEYYGTPVSLKSIAQISTPDGSTLLVQPYDKSSLKTIEKAIVSSDIG 618
TGRA+P+ LDRVEVEYYG+PV+LKS+AQ+S PDG TLLVQPYDKSSLK+IEKAI S++G
Sbjct: 123 TGRASPAFLDRVEVEYYGSPVNLKSLAQVSVPDGGTLLVQPYDKSSLKSIEKAISKSNLG 182
Query: 619 LTPNNDGEVIRLSIPQLTSERRKELSKVVAKLTEEGKVAIRNIRRDANKAYXXXXXXXXX 798
LTP+NDG VIRLSIPQLTSERRKEL KVVAK+ EEGK+AIRNIRRDA KAY
Sbjct: 183 LTPSNDGNVIRLSIPQLTSERRKELLKVVAKIAEEGKIAIRNIRRDAIKAYEKLEKEKKL 242
Query: 799 XXDNVKDLSSDLQKLTDDYMKKVDAIQKQKEKELLTV 909
DNVKDLS DLQK+TD+++KKVD++ KQKEKEL+TV
Sbjct: 243 SEDNVKDLSGDLQKVTDEFIKKVDSLYKQKEKELMTV 279