BLASTX nr result
ID: Zingiber25_contig00010879
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber25_contig00010879 (318 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AGE44298.1| whirly transcription factor domain containing pro... 122 4e-26 gb|EOY16919.1| Whirly 2, putative isoform 2 [Theobroma cacao] 97 2e-18 gb|EOY16918.1| Whirly 2, putative isoform 1 [Theobroma cacao] 97 2e-18 gb|EMS54540.1| hypothetical protein TRIUR3_19131 [Triticum urartu] 95 8e-18 ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 95 1e-17 gb|ACG35575.1| DNA binding protein [Zea mays] 95 1e-17 gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays] gi|41392... 94 1e-17 gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PB... 94 1e-17 ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g... 94 2e-17 ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding prote... 93 3e-17 ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 93 4e-17 ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825... 92 5e-17 ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protei... 92 9e-17 gb|EMT15491.1| hypothetical protein F775_24520 [Aegilops tauschii] 92 9e-17 ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG4... 91 1e-16 ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 91 2e-16 ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] 89 8e-16 ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [S... 88 1e-15 ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 87 2e-15 pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 87 2e-15 >gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB Group] Length = 245 Score = 122 bits (307), Expect = 4e-26 Identities = 59/108 (54%), Positives = 78/108 (72%), Gaps = 11/108 (10%) Frame = -3 Query: 292 RSADVKVSLWLGSKCGISTSGPDLATDARST-----------SFKRFADYTIFKGKAAMA 146 R+ +VK S WL S+ ISTSGP L D S+ S +R+ +YT+FKGKAA++ Sbjct: 16 RATNVKDSFWLSSQRSISTSGPGLVNDGSSSVRPPFSPTGSSSVRRYVEYTVFKGKAALS 75 Query: 145 LSPILPTFREVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 +SPILPTFREV+S S++ K+GCV++TFWPAIG +KYDW +KQ FALS Sbjct: 76 VSPILPTFREVDSGVSRVHKKGCVILTFWPAIGQRKYDWQKKQAFALS 123 >gb|EOY16919.1| Whirly 2, putative isoform 2 [Theobroma cacao] Length = 198 Score = 97.4 bits (241), Expect = 2e-18 Identities = 47/100 (47%), Positives = 71/100 (71%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLW---LGSKCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 + DV+ +LW S+ ISTS D A+ ST+ + A YT++KGKAA +++P+LPTF Sbjct: 19 KRGDVRDALWSHAFESRAAISTSIHDFASKGNSTA-RVIAPYTVYKGKAAFSVTPLLPTF 77 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 +++S + KL +RG +M+TFWPA+G +KYDW ++Q FALS Sbjct: 78 SKIDSGNLKLDRRGAMMLTFWPAVGERKYDWEKRQRFALS 117 >gb|EOY16918.1| Whirly 2, putative isoform 1 [Theobroma cacao] Length = 236 Score = 97.4 bits (241), Expect = 2e-18 Identities = 47/100 (47%), Positives = 71/100 (71%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLW---LGSKCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 + DV+ +LW S+ ISTS D A+ ST+ + A YT++KGKAA +++P+LPTF Sbjct: 19 KRGDVRDALWSHAFESRAAISTSIHDFASKGNSTA-RVIAPYTVYKGKAAFSVTPLLPTF 77 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 +++S + KL +RG +M+TFWPA+G +KYDW ++Q FALS Sbjct: 78 SKIDSGNLKLDRRGAMMLTFWPAVGERKYDWEKRQRFALS 117 >gb|EMS54540.1| hypothetical protein TRIUR3_19131 [Triticum urartu] Length = 364 Score = 95.1 bits (235), Expect = 8e-18 Identities = 51/107 (47%), Positives = 74/107 (69%), Gaps = 4/107 (3%) Frame = -3 Query: 310 VSRNFGRSA-DVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMAL 143 +S GR D+K LW GS K +STS ++ +A S K++A YT+FKGKAA+++ Sbjct: 24 LSMKIGRGVTDLKDVLWSGSLTFKHALSTSAANVDENA---SVKKYASYTVFKGKAALSI 80 Query: 142 SPILPTFREVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 SPILP F +V S S++ + G VM+TF+PA+G +KYD+ +KQ+FALS Sbjct: 81 SPILPLFTKVESGGSRVDRNGSVMLTFFPAVGQRKYDYTKKQLFALS 127 >ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial-like isoform 1 [Solanum lycopersicum] Length = 238 Score = 94.7 bits (234), Expect = 1e-17 Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 3/97 (3%) Frame = -3 Query: 283 DVKVSLW---LGSKCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTFREV 113 DVK S+W + + ST D+ DA + FA Y++FKGKAA++ P LPTF + Sbjct: 23 DVKGSIWQNAINTFAAFSTVRQDVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRL 82 Query: 112 NSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 +S KL +RG +M+TFWP++G +KYDW ++Q+FALS Sbjct: 83 DSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALS 119 >gb|ACG35575.1| DNA binding protein [Zea mays] Length = 230 Score = 94.7 bits (234), Expect = 1e-17 Identities = 48/100 (48%), Positives = 71/100 (71%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 R D+K SLW GS + +ST+ +L + S K+FA YT+FKGKAA+++ PILP+F Sbjct: 14 RGFDLKESLWCGSLTFQQAVSTAATNLDGNL---SGKKFASYTVFKGKAALSIHPILPSF 70 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 ++ S S++ K G VM+TF+PA+G +KYD+ +KQ+FALS Sbjct: 71 SKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALS 110 >gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays] gi|413926544|gb|AFW66476.1| DNA binding protein isoform 2 [Zea mays] Length = 274 Score = 94.4 bits (233), Expect = 1e-17 Identities = 48/100 (48%), Positives = 71/100 (71%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 R D+K SLW GS + +ST+ +L + S K+FA YT+FKGKAA+++ PILP+F Sbjct: 56 RGFDLKESLWSGSLTFQQAVSTAATNLDGNL---SGKKFASYTVFKGKAALSIHPILPSF 112 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 ++ S S++ K G VM+TF+PA+G +KYD+ +KQ+FALS Sbjct: 113 SKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALS 152 >gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PBF-2 like transcription factor [Zea mays] gi|323388771|gb|ADX60190.1| PBF-2 like transcription factor [Zea mays] Length = 232 Score = 94.4 bits (233), Expect = 1e-17 Identities = 48/100 (48%), Positives = 71/100 (71%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 R D+K SLW GS + +ST+ +L + S K+FA YT+FKGKAA+++ PILP+F Sbjct: 14 RGFDLKESLWSGSLTFQQAVSTAATNLDGNL---SGKKFASYTVFKGKAALSIHPILPSF 70 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 ++ S S++ K G VM+TF+PA+G +KYD+ +KQ+FALS Sbjct: 71 SKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALS 110 >ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] gi|50251252|dbj|BAD28032.1| putative Chain C, Structure Of The Plant Transcriptional Regulator Pbf-2 [Oryza sativa Japonica Group] gi|50252182|dbj|BAD28177.1| putative Chain C, Structure Of The Plant Transcriptional Regulator Pbf-2 [Oryza sativa Japonica Group] gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed protein product [Oryza sativa Japonica Group] gi|215704516|dbj|BAG94149.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740785|dbj|BAG96941.1| unnamed protein product [Oryza sativa Japonica Group] gi|218190103|gb|EEC72530.1| hypothetical protein OsI_05924 [Oryza sativa Indica Group] gi|222622212|gb|EEE56344.1| hypothetical protein OsJ_05450 [Oryza sativa Japonica Group] Length = 228 Score = 93.6 bits (231), Expect = 2e-17 Identities = 47/100 (47%), Positives = 71/100 (71%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 R D+K +LW GS + +ST D +TS ++FA YT+FKGKAA+++ PILP+F Sbjct: 14 RVTDLKDALWSGSLTFQHALSTFAAD-----ENTSGRKFASYTVFKGKAALSMQPILPSF 68 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 ++ S S++ K G VM+TF+PA+G +KYD+++KQ+FALS Sbjct: 69 SKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFALS 108 >ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding protein WHY2, mitochondrial-like [Oryza brachyantha] Length = 230 Score = 93.2 bits (230), Expect = 3e-17 Identities = 45/100 (45%), Positives = 71/100 (71%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 R D+K +LW GS + +ST D +TS ++FA YT+FKGKAA+++ P+LP+F Sbjct: 16 RVTDLKDALWSGSLTFQHALSTLSAD-----ENTSGRKFASYTVFKGKAALSMHPVLPSF 70 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 ++ S S++ + G VM+TF+PA+G +KYD+++KQ+FALS Sbjct: 71 SKLESGGSRVSRNGSVMLTFFPAVGQRKYDYSKKQIFALS 110 >ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2, mitochondrial; AltName: Full=Protein WHIRLY 2; Short=StWHY2; Flags: Precursor gi|298359665|gb|ADI77438.1| Why2 protein [Solanum tuberosum] Length = 238 Score = 92.8 bits (229), Expect = 4e-17 Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 3/96 (3%) Frame = -3 Query: 280 VKVSLW---LGSKCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTFREVN 110 VK S+W + + G ST ++ DA + FA Y++FKGKAA++ P LPTF ++ Sbjct: 24 VKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLD 83 Query: 109 SQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 S KL +RG +M+TFWP++G +KYDW ++Q+FALS Sbjct: 84 SGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALS 119 >ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium distachyon] Length = 231 Score = 92.4 bits (228), Expect = 5e-17 Identities = 46/98 (46%), Positives = 72/98 (73%), Gaps = 3/98 (3%) Frame = -3 Query: 286 ADVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTFRE 116 +D+K LW GS + +STS ++ +A S ++FA YT+FKGKAA+++SPILP F + Sbjct: 16 SDLKDVLWSGSVTFEHALSTSAANVDENA---SARKFASYTVFKGKAALSISPILPNFTK 72 Query: 115 VNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 + S S++ K G VM+TF+PA+G ++YD+++KQ+FALS Sbjct: 73 IESGGSRVKKNGSVMLTFFPAVGQRQYDYSKKQLFALS 110 >ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial-like [Setaria italica] Length = 229 Score = 91.7 bits (226), Expect = 9e-17 Identities = 46/100 (46%), Positives = 72/100 (72%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 R D K +LW GS + +STS +L ++S K+FA YT+FKGKAA+++ PILP+F Sbjct: 14 RGFDPKEALWSGSLTFQQAVSTSAANLD---ENSSGKKFASYTVFKGKAALSIHPILPSF 70 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 ++ S +S++ + G VM+TF+PA+G +KYD+ +KQ+F+LS Sbjct: 71 CKMESGASRINRNGSVMLTFFPAVGQRKYDYTKKQLFSLS 110 >gb|EMT15491.1| hypothetical protein F775_24520 [Aegilops tauschii] Length = 352 Score = 91.7 bits (226), Expect = 9e-17 Identities = 52/121 (42%), Positives = 77/121 (63%), Gaps = 16/121 (13%) Frame = -3 Query: 316 FLVSRNFGRSADVKVSLWLGS---KCGISTSGPDL-------------ATDARSTSFKRF 185 FL S + G + D+K LW GS K +STS ++ + A + S K++ Sbjct: 7 FLPSTSRGVT-DLKDVLWSGSLTFKHALSTSAANVDARYMLQSLTARTSLSAENASVKKY 65 Query: 184 ADYTIFKGKAAMALSPILPTFREVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFAL 5 A YT+FKGKAA+++SPILP F +V S S++ + G VM+TF+PA+G +KYD+ +KQ+FAL Sbjct: 66 ASYTVFKGKAALSISPILPLFTKVESGGSRVDRNGSVMLTFFPAVGQRKYDYTKKQLFAL 125 Query: 4 S 2 S Sbjct: 126 S 126 >ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG48390.1| DNA binding protein [Zea mays] Length = 232 Score = 91.3 bits (225), Expect = 1e-16 Identities = 47/100 (47%), Positives = 70/100 (70%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 R D+K SLW GS + +ST+ +L + S K+FA YT+FKGKAA+++ PIL +F Sbjct: 14 RGFDLKESLWSGSLTFQQAVSTAATNLDGNL---SGKKFASYTVFKGKAALSIHPILXSF 70 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 ++ S S++ K G VM+TF+PA+G +KYD+ +KQ+FALS Sbjct: 71 SKLESGGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALS 110 >ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2, mitochondrial-like isoform 2 [Solanum lycopersicum] Length = 235 Score = 90.9 bits (224), Expect = 2e-16 Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 3/97 (3%) Frame = -3 Query: 283 DVKVSLW---LGSKCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTFREV 113 DVK S+W + + ST D+ D + + FA Y++FKGKAA++ P LPTF + Sbjct: 21 DVKGSIWQNAINTFAAFSTVRQDVVADGKREG-RVFAPYSVFKGKAALSAEPRLPTFNRL 79 Query: 112 NSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 +S KL +RG +M+TFWP++G +KYDW ++Q+FALS Sbjct: 80 DSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALS 116 >ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] Length = 238 Score = 88.6 bits (218), Expect = 8e-16 Identities = 41/95 (43%), Positives = 61/95 (64%), Gaps = 3/95 (3%) Frame = -3 Query: 280 VKVSLW---LGSKCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTFREVN 110 VK S+W + + G ST ++ DA + FA Y++FKGKAA++ P LPTF ++ Sbjct: 24 VKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLD 83 Query: 109 SQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFAL 5 S KL +RG +M+TFWP++G +KYDW ++QV L Sbjct: 84 SGGVKLNRRGVIMLTFWPSVGERKYDWEKRQVMCL 118 >ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [Sorghum bicolor] gi|241933167|gb|EES06312.1| hypothetical protein SORBIDRAFT_04g004060 [Sorghum bicolor] Length = 230 Score = 88.2 bits (217), Expect = 1e-15 Identities = 44/100 (44%), Positives = 70/100 (70%), Gaps = 3/100 (3%) Frame = -3 Query: 292 RSADVKVSLWLGS---KCGISTSGPDLATDARSTSFKRFADYTIFKGKAAMALSPILPTF 122 R D+K SL GS + +STS ++ + S K++A YT+FKGKAA+++ PILP+F Sbjct: 14 RGFDLKESLLSGSLTFQQAVSTSAANIDDNLSS---KKYASYTVFKGKAALSIQPILPSF 70 Query: 121 REVNSQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 ++ S S++ + G +M+TF+PA+G +KYD+ +KQ+FALS Sbjct: 71 SKLESGGSRVSRNGSIMLTFFPAVGPRKYDFTKKQLFALS 110 >ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] Length = 242 Score = 87.4 bits (215), Expect = 2e-15 Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 3/96 (3%) Frame = -3 Query: 280 VKVSLWLGSKCGISTSGPDLA---TDARSTSFKRFADYTIFKGKAAMALSPILPTFREVN 110 VK S G S+S P DA S + FA Y+IFKGKAA+++ P+LP+F E++ Sbjct: 25 VKASTLRGFASWSSSSTPGRGFSGKDAPKPSGRLFAPYSIFKGKAALSVEPVLPSFTEID 84 Query: 109 SQSSKLCKRGCVMMTFWPAIGTKKYDWNRKQVFALS 2 S + ++ +RG +MMTF PAIG +KYDW +KQ FALS Sbjct: 85 SGNLRIDRRGSLMMTFMPAIGERKYDWEKKQKFALS 120 >pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C Chain C, Crystal Structure Of Why2 From Arabidopsis Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal Structure Of Why2 From Arabidopsis Thaliana Length = 177 Score = 87.0 bits (214), Expect = 2e-15 Identities = 39/71 (54%), Positives = 55/71 (77%) Frame = -3 Query: 214 DARSTSFKRFADYTIFKGKAAMALSPILPTFREVNSQSSKLCKRGCVMMTFWPAIGTKKY 35 DA S + FA Y+IFKGKAA+++ P+LP+F E++S + ++ +RG +MMTF PAIG +KY Sbjct: 3 DAAKPSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKY 62 Query: 34 DWNRKQVFALS 2 DW +KQ FALS Sbjct: 63 DWEKKQKFALS 73