BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00010791
         (1963 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266...   541   e-151
ref|XP_006664786.1| PREDICTED: mediator of RNA polymerase II tra...   525   e-146
ref|XP_002457523.1| hypothetical protein SORBIDRAFT_03g008700 [S...   521   e-145
ref|NP_001145828.1| uncharacterized protein LOC100279335 [Zea ma...   513   e-143
ref|XP_004967947.1| PREDICTED: mediator of RNA polymerase II tra...   511   e-142
gb|EOY31009.1| RNA polymerase II transcription mediators isoform...   509   e-141
ref|NP_001067381.1| Os12g0638600 [Oryza sativa Japonica Group] g...   504   e-140
gb|EEE53678.1| hypothetical protein OsJ_37013 [Oryza sativa Japo...   504   e-140
ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822...   504   e-140
ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II tra...   503   e-139
gb|EMJ05807.1| hypothetical protein PRUPE_ppa002594mg [Prunus pe...   500   e-138
gb|ACN26952.1| unknown [Zea mays] gi|413926580|gb|AFW66512.1| hy...   498   e-138
gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]     494   e-137
ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citr...   486   e-134
ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II tra...   486   e-134
ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II tra...   485   e-134
ref|XP_002328671.1| predicted protein [Populus trichocarpa] gi|5...   484   e-134
ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II tra...   481   e-133
ref|XP_006842865.1| hypothetical protein AMTR_s00081p00160620 [A...   471   e-130
ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II tra...   465   e-128

>ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
            gi|147821405|emb|CAN63500.1| hypothetical protein
            VITISV_011675 [Vitis vinifera]
            gi|297738929|emb|CBI28174.3| unnamed protein product
            [Vitis vinifera]
          Length = 660

 Score =  541 bits (1393), Expect = e-151
 Identities = 288/580 (49%), Positives = 387/580 (66%), Gaps = 5/580 (0%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NL+LAHQELSVIIDLI+TVEANDAV V+ M RPK LPNE LSDL VSAATKLQ  R+L +
Sbjct: 77   NLRLAHQELSVIIDLISTVEANDAVTVASMTRPKPLPNEVLSDLGVSAATKLQCFRHLSK 136

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLA-GPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+KALE +++REARFYG+LIRLQQ+WK+KRQRV A  PG++GFS DL  N+  D  
Sbjct: 137  YFKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAASAPGNEGFSIDLFSNSLHDPV 196

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
             + RP   + VR+  ++AG+LA+  PP S R +   + G +  +  K+P K   Y   E 
Sbjct: 197  AVFRPSSLSTVRVDHDSAGMLAVHLPPNSCRALHFGFLGGHLGNIPKEPSKTKTYGPDEL 256

Query: 1426 PQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLED 1247
            P    K+ L+D   N  VK+THSVLRE HQ+IF EQVFD VN E++ +S G++VTG+ E+
Sbjct: 257  PSKEIKKPLSD---NECVKETHSVLREGHQAIFDEQVFDLVNREAFNSSSGVNVTGIREN 313

Query: 1246 LLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQNN 1067
             LQL +GQ  S+ MSLV   +++   D  G+    +          + +++ K + ++  
Sbjct: 314  YLQLNIGQGASVFMSLVPSGQDEKTADGMGMQNLESAILPMDTFDGVKLSDGKHDNDKKK 373

Query: 1066 LEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAHRI 890
               P+ +  EIYL  +FH++  VR K+K+ SA R   +   A +  GL  HFC ++AHRI
Sbjct: 374  SGFPNRISSEIYLKQLFHEHVFVRAKDKHISAGRTQPSSQPAKDGFGLLGHFCMSLAHRI 433

Query: 889  FSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYDVK 710
            FS+KVL E+E LVSR+PY+ LLSHP WHSRTSSW+L +K PES FH  C + +S+ ++VK
Sbjct: 434  FSSKVLMELENLVSRVPYLHLLSHPTWHSRTSSWTLLMKVPESSFHPGCQTRTSDIHNVK 493

Query: 709  GLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXXXX 533
             +I+    TK+V+ DD + V G+GA   +  F G S D  SM+ Y C             
Sbjct: 494  NIIKTHFRTKVVINDDCINVEGDGAPNVVGLFKGSSEDVCSMNRYDCDLADIPVILLQQV 553

Query: 532  XXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIMEDG 353
                IRWLH+EAL VG+K +RDFLCL  E+DQG+ML LVA V+PDD  GCISWW++M+DG
Sbjct: 554  ASQVIRWLHEEALKVGIKANRDFLCLSFEMDQGEMLSLVAHVNPDDPQGCISWWLVMDDG 613

Query: 352  MADDGKFSTNS--GEYKNRRFLGHLSLEALYSMLMDLVNV 239
             ++D KF T++  G  + R+FLGHLSLE LYS LMDLV++
Sbjct: 614  FSEDLKFHTDAPDGGSEYRKFLGHLSLEVLYSTLMDLVSL 653


>ref|XP_006664786.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Oryza brachyantha]
          Length = 583

 Score =  525 bits (1351), Expect = e-146
 Identities = 286/583 (49%), Positives = 398/583 (68%), Gaps = 8/583 (1%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            +LQ A QELS++IDLI+TVEANDAVAV+GM +PK LPNE L D AVSAATKLQRLR+LGR
Sbjct: 3    SLQQAQQELSIVIDLISTVEANDAVAVAGMLKPKSLPNETLVDTAVSAATKLQRLRHLGR 62

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRV-LAGPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+K +E +  +E+RFYGSLIRLQQ+WK+KRQR   +GPGS+GF FDL+D++  DT+
Sbjct: 63   YFKQSAKTMEQQFQKESRFYGSLIRLQQNWKVKRQRFGGSGPGSEGFMFDLVDSSQLDTS 122

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTG--TNFSSRSKKPLKGNIYNSV 1433
            ++ R    +L+ I ++++G L++Q P KS R +S+++ G  TN +      LK  I N  
Sbjct: 123  VMPRLSSLSLIPIDQDSSGTLSVQVPQKSCRFLSLNFRGDSTNGAESYGYKLKDGISNI- 181

Query: 1432 ENPQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGML 1253
              P A + +A  ++DVN  +K+ HS+LR IH+SIF EQVFD V  E++  S GI+VTGM 
Sbjct: 182  -TPSATENDA-DNDDVNKSIKNAHSILRNIHESIFEEQVFDMVIRETFVQSQGINVTGMR 239

Query: 1252 EDLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALV---VNNEKDE 1082
            ED LQL++GQ+ S+C+SL       D +DS  + ++G       D+S+LV   +N ++D 
Sbjct: 240  EDFLQLSIGQECSLCLSLA---HSGDGIDSEMVGREGRT--NSEDASSLVLATMNGKQDP 294

Query: 1081 FNQNNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKT 905
              ++ +  P+P  LEIYL+ +FH N L +++EK+ +  R       A +  GL  HFC T
Sbjct: 295  LRKDVIGFPNPRSLEIYLLQLFHANILRKVREKSLNVGRYQSPAQVAGDDYGLLGHFCMT 354

Query: 904  VAHRIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSN 725
            VAHRIFS KVL E+E +VS +PY+ L S P WHSRTSSWSL LK P+ +  T  +++ S+
Sbjct: 355  VAHRIFSNKVLLELESVVSGVPYLHLRSLPTWHSRTSSWSLCLKVPQPILATDRIAKPSD 414

Query: 724  NYDVKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXX 548
            N++ K   R Q +TK++VKD Q+++ GEG+     S  G S+DG  ++SY C        
Sbjct: 415  NHEPKYKSRSQFNTKVIVKDSQISLMGEGSPSIAGSLSGKSSDGHLINSYNCDLEDLPTM 474

Query: 547  XXXXXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWM 368
                     I WLH+EAL++GM V+RDFLCLY +L+QG+ LGLVA VDPDD  GCISW++
Sbjct: 475  LLQQVASQVIHWLHEEALVLGMNVTRDFLCLYFDLEQGETLGLVAHVDPDDAYGCISWYL 534

Query: 367  IMEDGMADDGKFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNV 239
             + D   +DGK S +S E++ RRFLG++SLE LYS LMDL+N+
Sbjct: 535  TI-DHPTEDGKMSADSYEFEKRRFLGYVSLEVLYSTLMDLINL 576


>ref|XP_002457523.1| hypothetical protein SORBIDRAFT_03g008700 [Sorghum bicolor]
            gi|241929498|gb|EES02643.1| hypothetical protein
            SORBIDRAFT_03g008700 [Sorghum bicolor]
          Length = 659

 Score =  521 bits (1342), Expect = e-145
 Identities = 273/582 (46%), Positives = 390/582 (67%), Gaps = 2/582 (0%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            +LQ AH ELSV+IDLI TVEANDAVAV+   +PK  PNE L D+AVSAATKLQRLR+L R
Sbjct: 80   SLQQAHHELSVVIDLIGTVEANDAVAVASTTKPKSQPNEILVDMAVSAATKLQRLRHLSR 139

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLAGPGSDGFSFDLLDNTSSDTTM 1604
            YFKQS++ +E +  +E RFY SLIRLQQ+WK+KRQR +  PGS+GF FDL+D++  DTT 
Sbjct: 140  YFKQSARTMEQQFQKETRFYSSLIRLQQNWKVKRQRAVGSPGSEGFMFDLVDSSQLDTTT 199

Query: 1603 LSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVENP 1424
            + R  P +L+ I ++++G L++Q P KSFR +++ + G   ++  +  +K          
Sbjct: 200  MPRLSPLSLIPIDQDSSGTLSVQIPQKSFRSLTLQFRGDIANNAERSAIKKKEGTLTNTT 259

Query: 1423 QANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLEDL 1244
               +K+ L + DVN  +K  HS+LR+IH+SIF EQVFD V  E++  S GI+VTGM ED 
Sbjct: 260  TEAEKDVLENGDVNKSIKHAHSILRDIHKSIFEEQVFDMVIRETFVQSQGINVTGMCEDF 319

Query: 1243 LQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQNNL 1064
            LQLA+GQ+ S+C+SL  + +++   ++ G  Q+ +    ++++ A+   N K+  N++  
Sbjct: 320  LQLAIGQECSLCLSL-ELSRQNSISETVG--QEDHMDTDYTENLAVATVNGKESSNKDVR 376

Query: 1063 EVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCG-LTHFCKTVAHRIF 887
              P+P  LEIYL+H+FH+N L +L+EK+    R   +  AA + CG L+HFC TV+HRIF
Sbjct: 377  GFPNPKCLEIYLLHMFHENILRKLREKSRHMVRYQSSAQAAPDDCGLLSHFCMTVSHRIF 436

Query: 886  STKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYDVKG 707
            S KV  E+E +VSR+PY+ L S P WHSRTSSWSL LK P+ +  T  + + S+++ +K 
Sbjct: 437  SNKVHLELESVVSRVPYLHLCSLPTWHSRTSSWSLCLKVPQPILATDRVRKPSDHHKLKY 496

Query: 706  LIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXXXXX 530
              R Q  TK+++KD Q+++ GEG+     S  G  +DG  ++SY C              
Sbjct: 497  KSRSQFSTKVILKDGQISLMGEGSPSIAGSLTGKPSDGRLINSYNCDLEDLPMMLLQQVA 556

Query: 529  XXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIMEDGM 350
               I WLHDEA+++GM V+RDFLCLY +LDQG+ LGLVA VDPDD  GCISW++ ++  M
Sbjct: 557  SQVIHWLHDEAMVLGMNVTRDFLCLYFDLDQGETLGLVAHVDPDDTYGCISWYLTVDHPM 616

Query: 349  ADDGKFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNVSTNSL 224
             ++GK S +S E + RRFLG+LSLE LYS LMDL+ + +  +
Sbjct: 617  -EEGKMSADSPELEKRRFLGYLSLEVLYSTLMDLIKLCSTGV 657


>ref|NP_001145828.1| uncharacterized protein LOC100279335 [Zea mays]
            gi|194704804|gb|ACF86486.1| unknown [Zea mays]
            gi|219884585|gb|ACL52667.1| unknown [Zea mays]
            gi|413947117|gb|AFW79766.1| hypothetical protein
            ZEAMMB73_523859 [Zea mays]
          Length = 661

 Score =  513 bits (1322), Expect = e-143
 Identities = 278/584 (47%), Positives = 389/584 (66%), Gaps = 5/584 (0%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            +LQ AHQELSV+IDLI TVEANDAVAV+   +PK  PNE L D+AVSAATKLQRLR+L  
Sbjct: 80   SLQQAHQELSVVIDLIGTVEANDAVAVASTTKPKSQPNEILVDMAVSAATKLQRLRHLSW 139

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLAGPGSDGFSFDLLDNTSSDTTM 1604
            YFKQS+K +E +  +E RFYGSLIRLQQ+WK+KRQR +  PGS+GF FDL+D++  DTT 
Sbjct: 140  YFKQSAKTMEQQFQKETRFYGSLIRLQQNWKVKRQRAVGSPGSEGFMFDLVDSSQLDTTT 199

Query: 1603 LSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTG---TNFSSRSKKPLKGNIYNSV 1433
            + R  P +L+ I ++++G L++Q P KS R +S+ + G    N  S + K  +G + N+ 
Sbjct: 200  VLRLSPLSLIPIDQDSSGTLSVQIPQKSLRSLSLKFHGDIVNNAESSAIKKKEGTLTNTT 259

Query: 1432 ENPQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGML 1253
               +   K+ L D+DVN  ++  HS+LR+IH+SIF EQVFD V  E++  S GI+VTGM 
Sbjct: 260  AEAE---KDVLADDDVNKSIRYAHSILRDIHKSIFEEQVFDMVIRETFNQSQGINVTGMC 316

Query: 1252 EDLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQ 1073
            ED LQLA+GQ+ S+C+SL    + +   ++  + Q+ +    +  + A+   N K+  N+
Sbjct: 317  EDFLQLAIGQECSLCLSLELSGQNN---NAGTVGQQDHMDTNYPGNLAVATVNGKESSNK 373

Query: 1072 NNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCG-LTHFCKTVAH 896
            +    P+P  LEIYL+H+FH+  L +L+EK+    R   +  AA + CG L+HFC TVAH
Sbjct: 374  DVRGFPNPKSLEIYLLHMFHE-ILRKLREKSRHVVRYQSSAQAAPDDCGLLSHFCMTVAH 432

Query: 895  RIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYD 716
            RIFS KV  E+E +VSR+PY+ L S P WHSRTSSWSL LK P+ +  T  +++ S+ ++
Sbjct: 433  RIFSNKVHLELESVVSRVPYLHLRSLPTWHSRTSSWSLCLKVPQPILATGRVTKPSDYHE 492

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXX 539
            +K   R Q  TK+++KD Q+++ GEG+   + S  G  +D   ++SY C           
Sbjct: 493  LKYKSRSQFSTKVILKDGQISLMGEGSPSIVGSLTGKPSDSRLINSYNCDLEDLPMMLLQ 552

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  I WLHDEA+I+GM V+RDFLCLY +L QG+ LGL+A VDPDD  GCISW++ +E
Sbjct: 553  QVASQVIHWLHDEAMILGMNVTRDFLCLYFDLGQGETLGLLAHVDPDDTYGCISWYLTVE 612

Query: 358  DGMADDGKFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNVSTNS 227
              M ++GK S  S E + RRFLG+LSLE LYS LMDL+ + + S
Sbjct: 613  HPM-EEGKMSAGSPESEKRRFLGYLSLEVLYSTLMDLIKLCSTS 655


>ref|XP_004967947.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Setaria italica]
          Length = 661

 Score =  511 bits (1317), Expect = e-142
 Identities = 275/584 (47%), Positives = 385/584 (65%), Gaps = 4/584 (0%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            +LQ A QELSV+IDLI TVEANDAVAV+   +PK  PNE L D+AVSAATKLQRLR+L R
Sbjct: 80   SLQQAQQELSVVIDLIGTVEANDAVAVASTTKPKSQPNEILVDMAVSAATKLQRLRHLSR 139

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVL-AGPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+K +E +  +E RFY SLIRLQQ+WK+KRQRV+ +GPGS+GF FDL+D+   DTT
Sbjct: 140  YFKQSAKTMEQQFQKETRFYNSLIRLQQNWKVKRQRVVGSGPGSEGFMFDLVDSYQLDTT 199

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
             + R  P +LV I ++++G L++Q P KSFR +S+ + G   ++      K        +
Sbjct: 200  TMPRVSPLSLVPIDQDSSGTLSVQIPQKSFRSLSLQFYGDTANNAESSASKKKEDTLSSS 259

Query: 1426 PQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLED 1247
                 K+AL ++DVN  VK  HS+LR+IH+SIF EQVFD V  +++  S GI+VTGM ED
Sbjct: 260  SSETDKDALENDDVNKSVKQAHSILRDIHKSIFEEQVFDMVIRDTFTQSQGINVTGMCED 319

Query: 1246 LLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSAL-VVNNEKDEFNQN 1070
             LQLA+GQ+ S+C+ LV   +     DS  + Q+ +    +S + A+  VN +++  N++
Sbjct: 320  FLQLAIGQECSLCLLLVPSGQNS---DSETVGQEDHMDSEYSGNLAVATVNGKQESLNKD 376

Query: 1069 NLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAHR 893
                P+P  LEIYL+H+FH+  + +++EK+    R       A E CGL  HFC TVAHR
Sbjct: 377  LRGFPNPKSLEIYLLHMFHEKIVRKIREKSRFVVRYQSPAQIAPEECGLLGHFCMTVAHR 436

Query: 892  IFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYDV 713
            IFS KV  E+E +VSR+PY+ L S P WHSRTSSWSL LK P+ +     +++ S+ ++ 
Sbjct: 437  IFSNKVHLELESVVSRVPYLHLCSLPTWHSRTSSWSLCLKVPQPILAADRITKPSDVHEP 496

Query: 712  KGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXXX 536
            +   R Q +TK+++KD Q+++ GEG+     S  G  +DG  ++SY C            
Sbjct: 497  RYKSRSQFNTKVILKDGQISLMGEGSPSIAGSLTGKPSDGRLINSYNCDLEDLPMMLLQQ 556

Query: 535  XXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIMED 356
                 I WLH+EA+++GM V+RDFLCLY +LDQG+ LGLVA VDPDD  GCISW++ + D
Sbjct: 557  VASQVIHWLHEEAMVLGMNVTRDFLCLYFDLDQGETLGLVAHVDPDDAYGCISWYLTV-D 615

Query: 355  GMADDGKFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNVSTNSL 224
               ++GK S ++ E + RRFLG+LSLE LYS LMDL+ + +  +
Sbjct: 616  HPTEEGKMSADNLELEKRRFLGYLSLEVLYSTLMDLIKLCSTGV 659


>gb|EOY31009.1| RNA polymerase II transcription mediators isoform 1 [Theobroma cacao]
            gi|508783754|gb|EOY31010.1| RNA polymerase II
            transcription mediators isoform 1 [Theobroma cacao]
          Length = 663

 Score =  509 bits (1312), Expect = e-141
 Identities = 276/582 (47%), Positives = 389/582 (66%), Gaps = 7/582 (1%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NLQLAHQELSVIIDLINTVEANDAV V+GM RPK LPNE LSDLAVSAATKLQ  R+LG+
Sbjct: 79   NLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLSDLAVSAATKLQCYRHLGK 138

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLAGPGS-DGFSFDLLDNTSSDTT 1607
            YFKQS+KALE +++REARFYG+LIRLQQ+WK+KRQRV A   S +GF+ DL DN+  D+ 
Sbjct: 139  YFKQSAKALEQQIAREARFYGALIRLQQNWKVKRQRVAAPSSSNEGFTIDLFDNSLYDSA 198

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSV-E 1430
             +SRP   +++ I  ++AG+LAI  P  S   +   + G + +   K+  K   + SV +
Sbjct: 199  TISRPSSLSVIHIEHDSAGMLAINLPSNSCHSLHFGFLGVHSADIPKESSKIKTHGSVDQ 258

Query: 1429 NPQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLE 1250
              + ++KE+++D++    VK+TH +LRE+HQSIF +QVFD VN E++  S G++VTG+ E
Sbjct: 259  TTRDSQKESMSDDES---VKETHLLLREVHQSIFNDQVFDMVNREAFNQSAGVNVTGIRE 315

Query: 1249 DLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNE-KDEFNQ 1073
            + LQL++GQ TS+ +SLV   K DD       +Q   +     DS   V + E K +  +
Sbjct: 316  NYLQLSIGQGTSLFISLVPSSKGDDQAVDTANAQNLESAIVSLDSFDDVKSGEGKHDITE 375

Query: 1072 NNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAH 896
                 P+ +  EIYL  I H+++ ++ K++  ++S   V+G +     GL  HF  ++AH
Sbjct: 376  KKWGFPNRISCEIYLQQIVHEHAFIKGKDRP-NSSGTRVSGQSGKVGSGLLGHFSLSLAH 434

Query: 895  RIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYD 716
            RIFS +VL ++E +V R+PY+ L++HP WHSRTSSW++F+K P+S+ H    S+ S+  +
Sbjct: 435  RIFSNRVLMKLENVVCRVPYLHLMTHPTWHSRTSSWTIFMKVPQSILHVESQSQKSDFQN 494

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSFGISA-DGSSMDSYGCXXXXXXXXXXX 539
            +K  I+ Q  TK+VV DD++ V GEGA   +  F  S+ D  S++ Y C           
Sbjct: 495  MKDAIKSQFRTKVVVNDDRINVEGEGAPNVVGLFKRSSEDICSVNKYDCDLADLPVIILQ 554

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  IRWLH+EAL+VG+K +RDFLCL  EL+QG+ + LVA VDP+D+ GCISWW++ME
Sbjct: 555  QVASQVIRWLHEEALMVGIKTNRDFLCLTFELEQGETVSLVAHVDPEDIQGCISWWLVME 614

Query: 358  DGMADDGK--FSTNSGEYKNRRFLGHLSLEALYSMLMDLVNV 239
            DG A+D K     + G  + R+FLGHLSL+ LYS LMDLV++
Sbjct: 615  DGFAEDWKLQMDMSDGASEYRKFLGHLSLDVLYSTLMDLVSL 656


>ref|NP_001067381.1| Os12g0638600 [Oryza sativa Japonica Group] gi|77556810|gb|ABA99606.1|
            expressed protein [Oryza sativa Japonica Group]
            gi|113649888|dbj|BAF30400.1| Os12g0638600 [Oryza sativa
            Japonica Group] gi|215694565|dbj|BAG89558.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218187319|gb|EEC69746.1| hypothetical protein
            OsI_39278 [Oryza sativa Indica Group]
          Length = 655

 Score =  504 bits (1299), Expect = e-140
 Identities = 278/587 (47%), Positives = 383/587 (65%), Gaps = 12/587 (2%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            +LQ A QELSV+IDLI+TVEANDAVAV+GM +PK LP E L D AVSAATKLQR+R+L R
Sbjct: 79   SLQQAQQELSVVIDLISTVEANDAVAVAGMLKPKSLPTETLVDTAVSAATKLQRVRHLSR 138

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRV-LAGPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+K +E +  +E+RFYGSLIRLQQ+WK+KRQR   +GPGS+GF FDL+D +  DT 
Sbjct: 139  YFKQSAKTMEQQFQKESRFYGSLIRLQQNWKVKRQRFGGSGPGSEGFMFDLIDTSQLDTA 198

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
             + R     L+ I ++++G L++Q P KS R +S+++             +G+  N VEN
Sbjct: 199  AMPRLSSLPLIPIDQDSSGTLSVQVPQKSCRFLSLNF-------------RGDSANGVEN 245

Query: 1426 PQANKKEALT--------DEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGI 1271
                 K+ ++        ++DVN  +K  HS+LR IH+SIF EQVFD V  E++  S GI
Sbjct: 246  YGHKLKDGISSITSSETDNDDVNKSIKHAHSILRNIHKSIFEEQVFDMVIRETFVQSQGI 305

Query: 1270 HVTGMLEDLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNE 1091
            +VTGM ED LQLA+GQ+ S+C+SL       D  DS  +  + +     + +  LV  N 
Sbjct: 306  NVTGMREDFLQLAIGQECSLCLSLA---HSGDGSDSEMVDHEDHANSEDASNLVLVTMNG 362

Query: 1090 K-DEFNQNNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-H 917
            K D   ++    P+P  LEIYL+ +FH+N L +++EK+ +  R       A +  GL  H
Sbjct: 363  KLDPLRKDVTGFPNPRSLEIYLLQLFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGH 422

Query: 916  FCKTVAHRIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLS 737
            FC TVAHRIFS KVL E+E +VSR+PY+ L S P WHSRTSSWSL LK P+ +     ++
Sbjct: 423  FCLTVAHRIFSNKVLVELESVVSRVPYLHLRSLPTWHSRTSSWSLCLKVPQPILAADRIA 482

Query: 736  ESSNNYDVKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXX 560
            + S+N+++K   R Q +TK++VKD Q+++ GEG+     S  G  +DG  ++SY C    
Sbjct: 483  KPSDNHELKYKSRSQFNTKVIVKDSQISLMGEGSPSIAGSLTGKPSDGYLVNSYNCDLED 542

Query: 559  XXXXXXXXXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCI 380
                         I WLH+EAL++GM V+RDFLCLY +L+QG+ LGLVA VDPDD  GCI
Sbjct: 543  LPTMLLQQVASQVIHWLHEEALVLGMNVTRDFLCLYFDLEQGETLGLVANVDPDDTCGCI 602

Query: 379  SWWMIMEDGMADDGKFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNV 239
            SW++ + D   +DGK S +S E++ RRFLG++SLE LYS LMDL+N+
Sbjct: 603  SWYLTI-DHPTEDGKMSADSQEFEKRRFLGYVSLEVLYSTLMDLINL 648


>gb|EEE53678.1| hypothetical protein OsJ_37013 [Oryza sativa Japonica Group]
          Length = 655

 Score =  504 bits (1299), Expect = e-140
 Identities = 278/587 (47%), Positives = 383/587 (65%), Gaps = 12/587 (2%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            +LQ A QELSV+IDLI+TVEANDAVAV+GM +PK LP E L D AVSAATKLQR+R+L R
Sbjct: 79   SLQQAQQELSVVIDLISTVEANDAVAVAGMLKPKSLPTETLVDTAVSAATKLQRVRHLSR 138

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRV-LAGPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+K +E +  +E+RFYGSLIRLQQ+WK+KRQR   +GPGS+GF FDL+D +  DT 
Sbjct: 139  YFKQSAKTMEQQFQKESRFYGSLIRLQQNWKVKRQRFGGSGPGSEGFMFDLIDTSQLDTA 198

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
             + R     L+ I ++++G L++Q P KS R +S+++             +G+  N VEN
Sbjct: 199  AMPRLSSLPLIPIDQDSSGTLSVQVPQKSCRFLSLNF-------------RGDSANGVEN 245

Query: 1426 PQANKKEALT--------DEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGI 1271
                 K+ ++        ++DVN  +K  HS+LR IH+SIF EQVFD V  E++  S GI
Sbjct: 246  YGHKLKDGISSITSSETDNDDVNKSIKHAHSILRNIHKSIFEEQVFDMVIRETFVQSQGI 305

Query: 1270 HVTGMLEDLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNE 1091
            +VTGM ED LQLA+GQ+ S+C+SL       D  DS  +  + +     + +  LV  N 
Sbjct: 306  NVTGMREDFLQLAIGQECSLCLSLA---HSGDGSDSEMVDHEDHANSEDASNLVLVTMNG 362

Query: 1090 K-DEFNQNNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-H 917
            K D   ++    P+P  LEIYL+ +FH+N L +++EK+ +  R       A +  GL  H
Sbjct: 363  KLDPLRKDVTGFPNPRSLEIYLLQLFHENILRKVREKSLNIGRYQSPAQVAGDDYGLLGH 422

Query: 916  FCKTVAHRIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLS 737
            FC TVAHRIFS KVL E+E +VSR+PY+ L S P WHSRTSSWSL LK P+ +     ++
Sbjct: 423  FCLTVAHRIFSNKVLVELESVVSRVPYLHLRSLPTWHSRTSSWSLCLKVPQPILAADRIA 482

Query: 736  ESSNNYDVKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXX 560
            + S+N+++K   R Q +TK++VKD Q+++ GEG+     S  G  +DG  ++SY C    
Sbjct: 483  KPSDNHELKYKSRSQFNTKVIVKDSQISLMGEGSPSIAGSLTGKPSDGYLVNSYNCDLED 542

Query: 559  XXXXXXXXXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCI 380
                         I WLH+EAL++GM V+RDFLCLY +L+QG+ LGLVA VDPDD  GCI
Sbjct: 543  LPTMLLQQVASQVIHWLHEEALVLGMNVTRDFLCLYFDLEQGETLGLVANVDPDDTCGCI 602

Query: 379  SWWMIMEDGMADDGKFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNV 239
            SW++ + D   +DGK S +S E++ RRFLG++SLE LYS LMDL+N+
Sbjct: 603  SWYLTI-DHPTEDGKMSADSQEFEKRRFLGYVSLEVLYSTLMDLINL 648


>ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822959 [Brachypodium
            distachyon]
          Length = 656

 Score =  504 bits (1298), Expect = e-140
 Identities = 283/585 (48%), Positives = 385/585 (65%), Gaps = 5/585 (0%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            +LQ A QEL+V++DLI+TVEANDAVAV+   +PK LPNE L D+AVSAATKLQRLR+LGR
Sbjct: 78   SLQQAQQELTVVLDLISTVEANDAVAVTTTSKPKSLPNEVLDDMAVSAATKLQRLRHLGR 137

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLA-GPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+K +E +  +EARFYGSLIRLQQ+WK+KR R  A GPGSD F FD++D +  DT 
Sbjct: 138  YFKQSAKTMEQQFQKEARFYGSLIRLQQNWKVKRHRFGATGPGSDSFMFDVVDTSQLDTA 197

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
             + R    +LV I ++++G L++Q P KS R +S+   G N SS      K    +S  +
Sbjct: 198  AMPRMSSMSLVPIDQDSSGTLSVQVPQKSCRFLSLQLRGDNASSAESYACKMKGISSTTS 257

Query: 1426 PQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLED 1247
              A + +AL ++DVN  VK  HS+LR IH+SIF EQVFD V  E++  S GI+VTGM ED
Sbjct: 258  --AAENDALENDDVNKSVKHAHSILRNIHKSIFEEQVFDMVIRETFVPSQGINVTGMRED 315

Query: 1246 LLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVN--NEKDEFNQ 1073
             LQLA+GQ+  +C+SL     + D  +  GL +  ++     D+S LV+   N K E ++
Sbjct: 316  FLQLAIGQENLLCLSLEHSGLDTD-SEMEGLEEPTDS----EDASNLVLATINGKQEPSK 370

Query: 1072 NNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAH 896
             +    +P  LEIYL+H+FH+N L +++EK  +  R      AA + C L  HFC TVAH
Sbjct: 371  MDASGLNPKSLEIYLLHMFHENILRKVREKYRNIVRYPSPAQAAGDDCNLLGHFCMTVAH 430

Query: 895  RIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYD 716
            RIFS KV  E+E +VSR+PY+ L S P WHSRTSSWSL L+ P+ +     +++  +N +
Sbjct: 431  RIFSNKVHLELESVVSRVPYLHLQSLPTWHSRTSSWSLCLRVPQPILAADRVTKPLDNDE 490

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSFGIS-ADGSSMDSYGCXXXXXXXXXXX 539
             K   R Q +TK+++KD Q+++ GEG+     S     +DG  ++SY C           
Sbjct: 491  PKYKSRSQFNTKVILKDGQISLMGEGSPSIAGSLTRKPSDGYLINSYNCDLEDLPTMLLQ 550

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  I WLH+EAL++GM V+RDFLCLY +LDQGD LGLVA VDPDD  GCISW++ + 
Sbjct: 551  QVASQVINWLHEEALVLGMNVTRDFLCLYFDLDQGDTLGLVAHVDPDDAYGCISWYLTI- 609

Query: 358  DGMADDGKFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNVSTNSL 224
            D  A DGK ST++ E++ RRFLG+LSLE LYS LMDL+N+ +  +
Sbjct: 610  DHSAKDGKMSTDNPEFEKRRFLGYLSLEVLYSTLMDLINLCSTGV 654


>ref|XP_004300164.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Fragaria vesca subsp. vesca]
          Length = 655

 Score =  503 bits (1295), Expect = e-139
 Identities = 275/580 (47%), Positives = 376/580 (64%), Gaps = 5/580 (0%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NL LAHQELSVI+DLINTVEANDAV V+ M RP+  PNE LSDLAVSAATKLQ  R+LG+
Sbjct: 80   NLHLAHQELSVIVDLINTVEANDAVTVASMTRPRPFPNEALSDLAVSAATKLQCFRHLGK 139

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLA-GPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+ ALE +++REARFYG+LIRLQQ+WK+KRQR +A   G++GF+ DL DN+  D  
Sbjct: 140  YFKQSANALEQQMAREARFYGALIRLQQNWKVKRQRAVALASGNEGFTIDLFDNSLYDPA 199

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
             + RP P + V +  ++AG+LAI  PPKS+R +   +          +  K    +S + 
Sbjct: 200  GIFRPSPLSTVCVDHDSAGMLAINLPPKSYRSLRFGFISAYTDDTPTESSKTKTQSSSD- 258

Query: 1426 PQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLED 1247
                 KE+++D++    VK+THS+LRE+HQ+IF EQVFD VN E+   S G++VTG+ E+
Sbjct: 259  ---ADKESVSDDEC---VKETHSLLREVHQAIFSEQVFDLVNREACNQSLGVNVTGIQEN 312

Query: 1246 LLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQNN 1067
             LQL + QDTS+ +SLV   + ++ +DS       N          L +  +K +  +  
Sbjct: 313  YLQLNIDQDTSVFISLVPTNQGEETVDSPSTQNLENAILPLDTLDGLNLPEDKPDTPKKK 372

Query: 1066 LEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAHRI 890
              +P+ +  EIYL+ IFH++  V LK K+   S   V+G  A E  GL  HFC ++AHRI
Sbjct: 373  SIIPNQISCEIYLLQIFHQH--VFLKAKDRPTSGGGVSGQPAKEGSGLLGHFCMSLAHRI 430

Query: 889  FSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYDVK 710
            FS KVL E+E +V  +PY+QL SHP WHSRTSSW+L +K P+S+ H AC    S+++  K
Sbjct: 431  FSNKVLMELENVVRGVPYMQLTSHPTWHSRTSSWTLVVKIPQSILH-ACQIRVSDSHHTK 489

Query: 709  GLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXXXX 533
             + + Q HTK+VV DD + + GEGA   +  F G S +  SM+ Y C             
Sbjct: 490  HVTKSQFHTKVVVTDDCINIDGEGAPNVVGLFKGTSQEVCSMNRYDCDLADLSVIILQQV 549

Query: 532  XXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIMEDG 353
                IRWLH+EAL+VG+K + DFLCL  EL+QG+ L LVA VDP+D  GCISWW++MEDG
Sbjct: 550  ASQVIRWLHEEALMVGLKANWDFLCLSFELEQGETLSLVAHVDPEDTEGCISWWLVMEDG 609

Query: 352  MADDGKFS--TNSGEYKNRRFLGHLSLEALYSMLMDLVNV 239
              ++ K +   + G  ++R+FLGHLSLE LYS +MDLV +
Sbjct: 610  FVEERKLNIDISDGASESRKFLGHLSLEVLYSTMMDLVGL 649


>gb|EMJ05807.1| hypothetical protein PRUPE_ppa002594mg [Prunus persica]
          Length = 654

 Score =  500 bits (1287), Expect = e-138
 Identities = 278/582 (47%), Positives = 378/582 (64%), Gaps = 5/582 (0%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NLQLAHQELSVIIDLINTVE NDAV V+ M RPK   +E +SDLAVSAATKLQ  R+LG+
Sbjct: 79   NLQLAHQELSVIIDLINTVETNDAVTVASMTRPKPFHDEVMSDLAVSAATKLQCFRHLGK 138

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLA-GPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+KALE +V+REARFYG+LIRLQQ+WK+KRQRV A   G++GF+ DL D++  D  
Sbjct: 139  YFKQSAKALERQVAREARFYGALIRLQQNWKVKRQRVAASASGNEGFTIDLFDSSLYDPA 198

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
             + RP   + VR+  ++AG+LAI  PP S+R +   + G   +     P++ +    +  
Sbjct: 199  AIFRPSSLSTVRVDHDSAGMLAINLPPNSYRSLQFGFLG---ADPGVSPIESS-QTKIRL 254

Query: 1426 PQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLED 1247
                +KE+++D++    VK+THS+LRE+HQ+IF EQVFD VN E++  S G++VTG+ E+
Sbjct: 255  SSEAEKESVSDDEC---VKETHSLLREVHQAIFDEQVFDLVNREAFNQSLGVNVTGIQEN 311

Query: 1246 LLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQNN 1067
             LQL +GQ TS+ +SLV  + E   +DS       N          L +  +K +  +  
Sbjct: 312  YLQLNIGQGTSVFISLVPSRGEQT-VDSPSTQNLENTILPLDTLDGLELAEDKPDTVKKT 370

Query: 1066 LEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAHRI 890
              +P  +  EIYL  IFH++  V+ K++  SA    V+G  A E  GL  HFC ++AHRI
Sbjct: 371  SLIPDQISCEIYLQQIFHQHVFVKAKDRPTSAG-ARVSGQLAKEGPGLLGHFCMSLAHRI 429

Query: 889  FSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYDVK 710
            FS KVL E+E +V  +PY+QLLSHP WHSRTSSW LF+K PES+ H AC + +S+   ++
Sbjct: 430  FSNKVLKELENVVKGVPYLQLLSHPTWHSRTSSWMLFVKIPESILH-ACQTRTSDMRHMR 488

Query: 709  GLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXXXX 533
             + + Q HTK+VV DD + V GEGA   +  F G S +   M+ Y C             
Sbjct: 489  NITKSQFHTKVVVTDDCINVEGEGAPNVVGLFKGNSEEICLMNRYDCDLADLPVIILQQV 548

Query: 532  XXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIMEDG 353
                IRWLH+EAL+VG+K +RDFLCL  ELD G+ L LVA VDP+D  GCISWW+++  G
Sbjct: 549  ASQVIRWLHEEALMVGIKANRDFLCLSFELDLGETLSLVAHVDPEDGEGCISWWLVINGG 608

Query: 352  MADDGKFS--TNSGEYKNRRFLGHLSLEALYSMLMDLVNVST 233
              ++ K S   + G  ++R+FLGHLSLE LYS LMDLV++ T
Sbjct: 609  FVEERKLSMDASDGASESRKFLGHLSLEVLYSTLMDLVSLCT 650


>gb|ACN26952.1| unknown [Zea mays] gi|413926580|gb|AFW66512.1| hypothetical protein
            ZEAMMB73_010825 [Zea mays] gi|413926581|gb|AFW66513.1|
            hypothetical protein ZEAMMB73_010825 [Zea mays]
          Length = 660

 Score =  498 bits (1281), Expect = e-138
 Identities = 266/585 (45%), Positives = 376/585 (64%), Gaps = 5/585 (0%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            +LQ AHQELSV+IDLI TVEANDA+AV+   +PK  PNE L D+AV AATKLQ LR+L R
Sbjct: 80   SLQQAHQELSVVIDLIGTVEANDAMAVASTTKPKSQPNEILVDMAVCAATKLQCLRHLSR 139

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLAGPGSDGFSFDLLDNTSSDTTM 1604
            YFKQS+  +E +  +E RFY SLIRLQQ+WK+KRQR +  PGS+GF FDL+D +  DTT 
Sbjct: 140  YFKQSATTMEQQFQKETRFYSSLIRLQQNWKVKRQRSVGSPGSEGFMFDLVDTSQLDTTT 199

Query: 1603 LSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTG---TNFSSRSKKPLKGNIYNSV 1433
            + R  P +L+ I ++++G L++Q P K F  +S+ + G    N  S + K  +G + N+ 
Sbjct: 200  MPRLSPLSLIPIDQDSSGTLSVQIPQKCFHSLSLRFHGDIANNAESSAVKRKEGTLTNTT 259

Query: 1432 ENPQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGML 1253
               +    + L ++DVN   +  HS+LR+IH+SIF EQVFD V  E++  S GI+VTGM 
Sbjct: 260  TGAE---NDVLENDDVNKSTEHAHSILRDIHKSIFEEQVFDMVIQETFIQSQGINVTGMC 316

Query: 1252 EDLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQ 1073
            ED LQLA+GQ+ S+C+S     + +   +S  + Q+ +    H+ + A+   N K+  N+
Sbjct: 317  EDFLQLAIGQECSLCLSHDLSGQNN---NSGTVGQEDHMDIDHTGNLAVATVNGKESSNK 373

Query: 1072 NNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCG-LTHFCKTVAH 896
            +    P+P  LEIYL+H+FH+  L +L+EK+    R   +     + CG L+HFC TV+H
Sbjct: 374  DVRGFPNPKSLEIYLLHVFHEGILRKLREKSRHVVRYQSSAQGTPDECGLLSHFCMTVSH 433

Query: 895  RIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYD 716
            RIFS+KV  E+E +VSR+PY+ L S P WHSRTSSWSL LK P+ +  T  +   S+  +
Sbjct: 434  RIFSSKVHLELESVVSRVPYLHLCSLPTWHSRTSSWSLCLKVPQPILATDRVRRPSDYSE 493

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXX 539
            +K   R Q  TK+++KD Q+++ GEG+     S  G  +DG  ++SY C           
Sbjct: 494  LKCKSRSQFGTKVILKDGQISLMGEGSPSIAGSLAGKPSDGRLVNSYNCDLEDLPMMLLQ 553

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  I WLHDEA+++GM  + DFLCLYL+LDQG+ LGLVA VDPDD  GC+SW++ ++
Sbjct: 554  QVASQVIHWLHDEAVVLGMNATIDFLCLYLDLDQGETLGLVAHVDPDDTYGCVSWYLTLD 613

Query: 358  DGMADDGKFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNVSTNSL 224
                ++GK S  S E + RRFLG+LS E LYS LMDLV + +  +
Sbjct: 614  HHPTEEGKMSAGSPELEERRFLGYLSPELLYSTLMDLVKLCSTGV 658


>gb|EXB54541.1| hypothetical protein L484_006289 [Morus notabilis]
          Length = 701

 Score =  494 bits (1273), Expect = e-137
 Identities = 280/580 (48%), Positives = 382/580 (65%), Gaps = 7/580 (1%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NLQLA QELSVI+DLINTVEANDAV V+GM RPK LPNE LSDLAVSAA KLQ  R+LG+
Sbjct: 78   NLQLAQQELSVIVDLINTVEANDAVTVAGMTRPKPLPNEVLSDLAVSAAIKLQGFRSLGK 137

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRV-LAGPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+KALE +V REARFYG+LIRLQQ+WK+KRQR+  A  G++GF+ DL DN+  D  
Sbjct: 138  YFKQSAKALEQQVVREARFYGALIRLQQNWKVKRQRIAAAASGNEGFTIDLFDNSLYDPA 197

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
             + RP   ++VR+  + AG+LAI  PP S R +   + G +    + +P K  + +SV +
Sbjct: 198  SVYRPTFLSMVRVEHDPAGMLAINLPPNSCRSLQFGFFGVH-PCDNTEPNKTKVGSSVHS 256

Query: 1426 PQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLED 1247
             +  K+ A  DE     +K+TH +LR++HQSIF E+VFD VN E++  S G++VTG+ E+
Sbjct: 257  RETEKEAANDDE----CIKETHLLLRQVHQSIFDEKVFDLVNREAFNQSLGVNVTGIREN 312

Query: 1246 LLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQNN 1067
             LQL++G   S+ +SLVS  ++D   D  G +Q   N     DS   V   E+D+ +  N
Sbjct: 313  YLQLSIGLGNSVFISLVSSNQDDQTGDDAG-NQDIENAILPLDSLDGVKLPEEDKQDTFN 371

Query: 1066 LEVPSP--VGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAH 896
             E+ +P  +  EIYL  +FH++   R K+K  S     V+G  A E   L  HFC ++AH
Sbjct: 372  KELGTPDYISCEIYLQQLFHEHVFSRAKDKPVSTVS-RVSGQPAKEGPSLLGHFCLSLAH 430

Query: 895  RIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYD 716
            RIFS KVL  +E LVS + Y+QLLSHP W+SRTSSW++F+K P+S+ H     ++S+ + 
Sbjct: 431  RIFSKKVLVVLENLVSGVSYLQLLSHPTWNSRTSSWTIFMKIPQSILHGGS-HQTSDLHH 489

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXX 539
            +K   + Q  TK+V+KDD ++V GEGA   +  F G + + SSM+ Y C           
Sbjct: 490  MKSTTKSQFRTKVVIKDDFISVEGEGAPNVVGLFKGSAQEVSSMNRYECNLEDLPVIILQ 549

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  +RWLH+EAL+VG+KV+RDFL L  EL+QG+ L L+A VDP+D  GCISWW++ME
Sbjct: 550  QVAGQIVRWLHEEALMVGIKVNRDFLSLSFELEQGETLTLLAHVDPEDAQGCISWWLVME 609

Query: 358  DGMADDGK--FSTNSGEYKNRRFLGHLSLEALYSMLMDLV 245
            DG  ++GK     + G  + RRFLGHLSL+ LYS L+DLV
Sbjct: 610  DGFTEEGKLHMDLSDGVSEYRRFLGHLSLDLLYSTLIDLV 649


>ref|XP_006450970.1| hypothetical protein CICLE_v10007689mg [Citrus clementina]
            gi|557554196|gb|ESR64210.1| hypothetical protein
            CICLE_v10007689mg [Citrus clementina]
          Length = 657

 Score =  486 bits (1252), Expect = e-134
 Identities = 278/584 (47%), Positives = 373/584 (63%), Gaps = 9/584 (1%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NLQ AHQELSVIIDLINTVEANDAV V+GM RPK LPNE LSDL+VSAATKLQ  R+LG 
Sbjct: 83   NLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEVLSDLSVSAATKLQCYRHLGI 142

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLA-GPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+K+LE ++++EARFYG+LIRLQQ+WK+KRQRV A   G++GF+ DL DN+  D+ 
Sbjct: 143  YFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAPASGNEGFTIDLFDNSLYDSA 202

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVE- 1430
             +SRP   + +RI  ++AG+LAI  PP S R     + G      SK+  K  + NS   
Sbjct: 203  PVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQSGDSSKQCSK--VKNSCSP 260

Query: 1429 NPQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLE 1250
             P    KE++ D++    V++ HS+LRE+HQ+IF EQVFD VN E++  S G++VTG+ E
Sbjct: 261  RPSKEAKESVNDDEC---VREKHSLLREVHQAIFYEQVFDIVNREAFKQSLGVNVTGIRE 317

Query: 1249 DLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDS-SALVVNNEKDEFNQ 1073
            + LQL +G   SI +SL+   + D  +DS  ++Q   +G    DS   + +  EKD+  +
Sbjct: 318  NYLQLGIGLGISIFLSLIPSNQGDLSVDS-WVNQNVESGILPLDSHDGVKLAEEKDDILR 376

Query: 1072 NNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAH 896
             +   P+P+  EIYL  +FH+    R K K  S     V+G    +  GL  HFC ++AH
Sbjct: 377  KSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTG-TRVSGPPTKDGSGLLGHFCLSLAH 435

Query: 895  RIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYD 716
            RIFS KV  E+E  V  +PY+ L+SHP WHSRTSSW++FLK P+S+ H    S ++    
Sbjct: 436  RIFSNKVRVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQSILHAESNSRTAET-- 493

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXX 539
                 +    T +VV DD + V GEG    +  F G S D SSM+ Y C           
Sbjct: 494  ----AKSHFRTNVVVNDDCIHVEGEGTPNVVGLFEGRSEDMSSMNKYDCDLADLPVIILQ 549

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  IRWLH+EAL+VG+K +RDFL L  ELDQG+ + LVA VDP+D+ GCISWW++ME
Sbjct: 550  QVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVME 609

Query: 358  DGMADDGK----FSTNSGEYKNRRFLGHLSLEALYSMLMDLVNV 239
            DG A + K     S ++ +YK  +FLGHLSL+ LYS LMDLV++
Sbjct: 610  DGFAAERKLSIDISDDASDYK--KFLGHLSLDVLYSTLMDLVSL 651


>ref|XP_006475818.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Citrus sinensis]
          Length = 657

 Score =  486 bits (1251), Expect = e-134
 Identities = 278/584 (47%), Positives = 373/584 (63%), Gaps = 9/584 (1%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NLQ AHQELSVIIDLINTVEANDAV V+GM RPK LPNE LSDL+VSAATKLQ  R+LG 
Sbjct: 83   NLQFAHQELSVIIDLINTVEANDAVTVAGMTRPKALPNEVLSDLSVSAATKLQCYRHLGI 142

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLA-GPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+K+LE ++++EARFYG+LIRLQQ+WK+KRQRV A   G++GF+ DL DN+  D+ 
Sbjct: 143  YFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAPASGNEGFTIDLFDNSLYDSA 202

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVE- 1430
             +SRP   + +RI  ++AG+LAI  PP S R     + G      SK+  K  + NS   
Sbjct: 203  PVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQSGDSSKQCSK--VKNSCSP 260

Query: 1429 NPQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLE 1250
             P    KE++ D++    V++ HS+LRE+HQ+IF EQVFD VN E++  S G++VTG+ E
Sbjct: 261  RPSKEAKESVNDDEC---VREKHSLLREVHQAIFYEQVFDIVNREAFKQSLGVNVTGIRE 317

Query: 1249 DLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDS-SALVVNNEKDEFNQ 1073
            + LQL +G   SI +SL+   + D  +DS  ++Q   +G    DS   + +  EKD+  +
Sbjct: 318  NYLQLGIGLGISIFLSLIPSNQGDLSVDS-WVNQNVESGILPLDSHDGVKLAEEKDDILR 376

Query: 1072 NNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAH 896
             +   P+P+  EIYL  +FH+    R K K  S     V+G    +  GL  HFC ++AH
Sbjct: 377  KSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTG-TRVSGPPTKDGSGLLGHFCLSLAH 435

Query: 895  RIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYD 716
            RIFS KV  E+E  V  +PY+ L+SHP WHSRTSSW++FLK P+S+ H    S ++    
Sbjct: 436  RIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQSILHAESNSRTAET-- 493

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXX 539
                 +    T +VV DD + V GEG    +  F G S D SSM+ Y C           
Sbjct: 494  ----AKSHFRTNVVVNDDCIHVEGEGTPNVVGLFKGRSEDMSSMNKYDCDLADLPVIILQ 549

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  IRWLH+EAL+VG+K +RDFL L  ELDQG+ + LVA VDP+D+ GCISWW++ME
Sbjct: 550  QVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVME 609

Query: 358  DGMADDGK----FSTNSGEYKNRRFLGHLSLEALYSMLMDLVNV 239
            DG A + K     S ++ +YK  +FLGHLSL+ LYS LMDLV++
Sbjct: 610  DGFAAERKLSIDISDDASDYK--KFLGHLSLDVLYSTLMDLVSL 651


>ref|XP_006364902.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Solanum tuberosum]
          Length = 663

 Score =  485 bits (1248), Expect = e-134
 Identities = 272/586 (46%), Positives = 374/586 (63%), Gaps = 7/586 (1%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NL+LAHQEL VIIDLI+TVEANDAV V+ M RPKQLPNE+LSDLAVS ATKLQ  R+LG+
Sbjct: 86   NLRLAHQELQVIIDLIHTVEANDAVTVASMTRPKQLPNEHLSDLAVSMATKLQCFRHLGK 145

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQR-VLAGPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+KALE +V+REARFYG+LIRLQQ+WK+K  R V A  G++GF  DL D +  D  
Sbjct: 146  YFKQSAKALEQQVAREARFYGALIRLQQNWKVKWHRMVAAASGNEGFYIDLFDTSLYDPA 205

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
            +  RP   ++VRI  + AG+LA+  PP S R +   + G +  S      +     S E+
Sbjct: 206  VAFRPSSASVVRIEHDPAGMLAVNLPPNSCRTLQFEFLGASAPSGVINHSRLKPKGSFED 265

Query: 1426 PQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLED 1247
                 K   +D++    V++THS LRE+H++IF EQVFD VN E++  + G  VTG+ E+
Sbjct: 266  SSGETKREKSDDE---HVRETHSTLREVHRAIFDEQVFDLVNREAFNPALGADVTGIQEN 322

Query: 1246 LLQLAVGQDTSICMSLVSVKKEDDFLDSRG--LSQKGNNGFTHSDSSALVVNNEKDEFNQ 1073
            LL+L++GQ  S+ +SLV    +    ++ G   S+     F   D+S L    ++ +FN 
Sbjct: 323  LLRLSIGQRASLSISLVPSTDDGQTANAVGDEHSETAIVPFESVDASKL----DEGKFNF 378

Query: 1072 NNLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAH 896
              L  P+ +  EIYL  +FH++  ++ K +  S  +  ++     +   L  HFC ++AH
Sbjct: 379  KKLGFPNRISFEIYLQQLFHEHVFIKAKNRLSSLGKPQLSSQPVKDGPNLLGHFCVSLAH 438

Query: 895  RIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYD 716
            RIFS KVLAE+E LVSRIPYVQL+SHP WHSRTSSW+L +  PES+ H   LS SS   D
Sbjct: 439  RIFSNKVLAELESLVSRIPYVQLISHPTWHSRTSSWTLSMDVPESILHAGSLSHSS---D 495

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSFGISADGS-SMDSYGCXXXXXXXXXXX 539
                ++    TK++V+DD +++ GEGA   +  F    D +  M+ Y C           
Sbjct: 496  YVKNVKFHFRTKVMVRDDCISLEGEGAPNVVGLFKGKPDSTCPMNRYDCDLSDLPMVLLQ 555

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  IRWLH+EAL+VG+K +RDFL L  EL+QG+ L LVA VDP+D+ GCISWW++M 
Sbjct: 556  QVASQVIRWLHEEALMVGIKANRDFLSLSFELEQGETLSLVAHVDPEDIQGCISWWLVMG 615

Query: 358  DGMADDG--KFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNVSTNS 227
            DG +++   K   NSGE + R+FLG+LSLE LYS LMD+V+VS+ +
Sbjct: 616  DGFSEENKLKMDVNSGESETRKFLGYLSLEVLYSTLMDMVSVSSTA 661


>ref|XP_002328671.1| predicted protein [Populus trichocarpa]
            gi|566206273|ref|XP_006374395.1| hypothetical protein
            POPTR_0015s06780g [Populus trichocarpa]
            gi|550322157|gb|ERP52192.1| hypothetical protein
            POPTR_0015s06780g [Populus trichocarpa]
          Length = 667

 Score =  484 bits (1246), Expect = e-134
 Identities = 269/582 (46%), Positives = 373/582 (64%), Gaps = 7/582 (1%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NL LAHQELSVIIDLINTVEANDAV V+GM RPK LPNE L+DLAVS ATKLQ  RNLG+
Sbjct: 86   NLHLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEILADLAVSTATKLQCYRNLGK 145

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLA-GPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+KALE +V+REARFYG+LIRLQQ+WK+KRQRV A  PG++GF  DL DN+  D+ 
Sbjct: 146  YFKQSAKALEQQVAREARFYGALIRLQQNWKVKRQRVAAIAPGNEGFMIDLFDNSLYDSV 205

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
             + +P   + +RI  ++ G+LAI  P KS   +   +  +  S+  KK  K   + S++N
Sbjct: 206  AVFQPSSLSTIRIDHDSDGMLAINLPSKSCHSLVFGFL-SGHSNVPKKSNKIKTHGSLKN 264

Query: 1426 PQAN-KKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLE 1250
            P  N +KE+L+D   N  VKDTH +LR++H++IF EQVFD VN  +   S G++VTG+ E
Sbjct: 265  PSKNPEKESLSD---NECVKDTHLLLRKVHRTIFDEQVFDMVNRGAVNQSSGLNVTGIQE 321

Query: 1249 DLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQN 1070
            + LQL +G   SI +S+V   + D  +DS G     +          + +  EK      
Sbjct: 322  NYLQLCIGPGISIFISIVPSDQGDQAIDSEGPENLESAVVPLDSFDGVKLAEEKHNSLTK 381

Query: 1069 NLEVPSPVGLEIYLVHIFHKNSLVRLKEK-NFSASRVAVAGHAATESCG-LTHFCKTVAH 896
                P+ +  EIYL  IFH+   V  K + +F+ +R  + G  A +  G L+HFC +++H
Sbjct: 382  KPRFPNCITYEIYLKQIFHEYVFVEAKGRPSFTGTR--MPGQPANDGSGLLSHFCLSLSH 439

Query: 895  RIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYD 716
            RI S KVL E+E +V R+PY+ L+SHP WHSR+S+W++F+K P S+ H +  + + +  +
Sbjct: 440  RIISNKVLMELENVVCRVPYLHLISHPTWHSRSSAWTIFMKIPPSILHASSQTRTPDIQN 499

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSFGISADGS-SMDSYGCXXXXXXXXXXX 539
            +K +++ +  TK+VV DD + +  EGA   +  F  S+D   S + Y C           
Sbjct: 500  MKNVVKSEFWTKVVVHDDCINIEAEGAPNVVGLFKDSSDDKCSTNKYDCNLDDLPVIILQ 559

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  IRWLH+EAL VG+K +RDFLCL  EL+QG++L LVA VDP+D  GCISWW+ ME
Sbjct: 560  QVASQVIRWLHEEALAVGIKANRDFLCLSFELEQGEILNLVAHVDPEDTQGCISWWLTME 619

Query: 358  DGMADDGKFSTN--SGEYKNRRFLGHLSLEALYSMLMDLVNV 239
            DG A++ K   N   G  + R+FLG+L L+ LYS LMDLV++
Sbjct: 620  DGFAEEKKLHMNIADGASEYRKFLGYLPLDVLYSTLMDLVSL 661


>ref|XP_004251571.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Solanum lycopersicum]
          Length = 663

 Score =  481 bits (1237), Expect = e-133
 Identities = 267/584 (45%), Positives = 369/584 (63%), Gaps = 5/584 (0%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NL+LAHQEL VIIDLI+TVEANDAV V+GM RPKQLPNE+LSDLAVS ATKLQ  R+LG+
Sbjct: 86   NLRLAHQELQVIIDLIHTVEANDAVTVAGMTRPKQLPNEHLSDLAVSMATKLQCFRHLGK 145

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQR-VLAGPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+KALE +V+REARFYG+LIRLQQ+WK+K  R V A  G++GF  DL D +  D  
Sbjct: 146  YFKQSAKALEQQVAREARFYGALIRLQQNWKVKWHRMVAAASGNEGFYIDLFDTSLYDPA 205

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
            +  RP   ++VRI  + AG+LA+  PP S R +   + G +  +   K  +     S E+
Sbjct: 206  VAFRPSSASVVRIEHDPAGMLAVNLPPNSCRTLQFEFLGASTPAGVIKHSRLRPKVSFED 265

Query: 1426 PQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLED 1247
                 K   +D++    V++THS LRE+H++IF EQVFD VN E++  + G  VTG+ E+
Sbjct: 266  SSGETKREKSDDE---HVRETHSTLREVHRAIFDEQVFDLVNREAFNPALGADVTGIQEN 322

Query: 1246 LLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQNN 1067
            LL+L++GQ  S+ +SL  V   DD   +  +  +          S      ++ + +   
Sbjct: 323  LLRLSIGQRASLSISL--VPSADDGQTANAVGDEHPETAIVPFESVDASKQDEGKLDLKK 380

Query: 1066 LEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAHRI 890
            L  P+ +  EIYL  +FH++  ++ K +  S  +  ++     +   L  HFC ++AHRI
Sbjct: 381  LGFPNRISFEIYLQQLFHEHVFIKAKNRLSSLGKPEISSQPVKDGPNLLGHFCVSLAHRI 440

Query: 889  FSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTACLSESSNNYDVK 710
            FS KVLAE+E LVSR+PYVQL+SHP WHSRTSSW+L +  PES+ H   LS SS   D  
Sbjct: 441  FSNKVLAELESLVSRVPYVQLISHPTWHSRTSSWTLSMDVPESILHAGSLSHSS---DYV 497

Query: 709  GLIRPQIHTKIVVKDDQVTVSGEGALGTLCSFGISADG-SSMDSYGCXXXXXXXXXXXXX 533
              ++    TK++V+DD +++ GEGA   +  F    D    M+ Y C             
Sbjct: 498  KNVKFHFRTKVMVRDDCISLEGEGAPNIVGLFKGKPDSICPMNRYDCDLSDLPMVLLQQV 557

Query: 532  XXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIMEDG 353
                IRWLH+EAL+VG+K +RDFL L  EL+QG+ L LVA VDP+D+ GCISWW++M DG
Sbjct: 558  ASQVIRWLHEEALMVGIKANRDFLSLSFELEQGETLSLVAHVDPEDIQGCISWWLVMGDG 617

Query: 352  MADDGK--FSTNSGEYKNRRFLGHLSLEALYSMLMDLVNVSTNS 227
             +++ K     NSGE + R+FLG+LSLE LYS LMD+V+VS+ +
Sbjct: 618  FSEENKLQMDVNSGESETRKFLGYLSLEVLYSTLMDMVSVSSTA 661


>ref|XP_006842865.1| hypothetical protein AMTR_s00081p00160620 [Amborella trichopoda]
            gi|548845021|gb|ERN04540.1| hypothetical protein
            AMTR_s00081p00160620 [Amborella trichopoda]
          Length = 668

 Score =  471 bits (1213), Expect = e-130
 Identities = 262/593 (44%), Positives = 378/593 (63%), Gaps = 14/593 (2%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NL+ AH ELSVIIDL++ VEANDAVAV+GM RPK LPNE LSDLA+S +TKLQ  +++G+
Sbjct: 80   NLRQAHHELSVIIDLVHNVEANDAVAVAGMTRPKPLPNEVLSDLAISTSTKLQCFQHVGK 139

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLAGP-GSDGFSFDLLDNTSSDTT 1607
            Y KQS+KALE +V+REARFYGSLIRLQQ+WK+KRQR LA P GS+GF+FDL D + SD  
Sbjct: 140  YLKQSAKALEHQVAREARFYGSLIRLQQNWKVKRQRALAAPSGSEGFTFDLSDISLSD-P 198

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISYTGTNFSSRSKKPLKGNIYNSVEN 1427
            +L R    + VRI  ++ G+LA+  PP S   + + +     S+   +P   NI +  E 
Sbjct: 199  LLFRTSSLSTVRIEHDSTGMLAVTLPPNSCHALFLGFRDGPSSTIPIQPAGSNIDSLREG 258

Query: 1426 PQAN-KKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLE 1250
                 KKE  T+EDVN  +K+TH++LR IH++IF EQVFD VN E++  SPG++VTGM E
Sbjct: 259  FDCGAKKETATNEDVNECLKETHALLRSIHRAIFDEQVFDWVNREAFNGSPGVNVTGMRE 318

Query: 1249 DLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFT------HSDSSALVVNNEK 1088
            + LQL++  + S+C+ L++  K+D      G+  +G+   +         S A + N ++
Sbjct: 319  NFLQLSLNPEISVCLKLLASNKDDQSESQNGIHNEGSRVVSVDLSEGSGASDARLKNTQE 378

Query: 1087 DEFNQNNLEVPSPVGLEIYLVHIFHKNSLVRLKE----KNFSASRVAVAGHAATESCG-L 923
             E N     +P  +  EIYL  +  +N  VR +E        +++V  +     +  G L
Sbjct: 379  KEQNW----LPDALSCEIYLQQLLLENVFVRDREIRAPVKCGSNKVQGSMKPIGDGFGFL 434

Query: 922  THFCKTVAHRIFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFHTAC 743
             HFC +++HRIFS KVL ++E L +R+PYV LLSHP W+SR S+WSL++K P+S+ H   
Sbjct: 435  GHFCVSLSHRIFSHKVLVDLENLAARVPYVHLLSHPTWNSRISAWSLYMKVPQSIMHLG- 493

Query: 742  LSESSNNYDVKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXX 566
                   +D++  IR Q +TK+VV D+ + + GE A   +  F   S +  S+  Y C  
Sbjct: 494  -KTKPETFDLEKGIRSQFYTKVVVNDESICIEGEAAPSVVGLFRSDSVEVRSISGYHCGL 552

Query: 565  XXXXXXXXXXXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNG 386
                           + W+H+EALIVGMKV+RDFL L+ E++QGD LGLVAR+D DD + 
Sbjct: 553  EDLTPMLLQQVASQVVHWIHEEALIVGMKVTRDFLSLWFEVEQGDRLGLVARIDQDDPHC 612

Query: 385  CISWWMIMEDGMADDGKFSTNSGEYKNRRFLGHLSLEALYSMLMDLVNVSTNS 227
            CI WW+++ED   +     +N G  ++++FLGHLSLE+LY++LMDLV++ ++S
Sbjct: 613  CIGWWLVLEDARMEGHPDLSNGGSSESKKFLGHLSLESLYAVLMDLVSLCSSS 665


>ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            17-like [Cucumis sativus]
            gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 17-like [Cucumis
            sativus]
          Length = 662

 Score =  465 bits (1196), Expect = e-128
 Identities = 260/590 (44%), Positives = 376/590 (63%), Gaps = 7/590 (1%)
 Frame = -1

Query: 1963 NLQLAHQELSVIIDLINTVEANDAVAVSGMQRPKQLPNENLSDLAVSAATKLQRLRNLGR 1784
            NLQLAHQELSVIIDLINTVEANDAV V+GM RPK LPNE L+DL VS ATKLQ  R+LG+
Sbjct: 79   NLQLAHQELSVIIDLINTVEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGK 138

Query: 1783 YFKQSSKALELKVSREARFYGSLIRLQQHWKLKRQRVLA-GPGSDGFSFDLLDNTSSDTT 1607
            YFKQS+K LE +V+REARFYG+LIRLQQ+WK+KRQRV A  P ++GF+ DL DN+S D +
Sbjct: 139  YFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPS 198

Query: 1606 MLSRPLPNALVRIVRENAGLLAIQRPPKSFRCISISY-TGTNFSSRSKKPLKGNIYNSVE 1430
             + RP  ++ +R+  +++G+LAI  PP S   +   + +G N  +  ++  K    N   
Sbjct: 199  SVFRP-SSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLERD-KNESTNPSN 256

Query: 1429 NPQANKKEALTDEDVNSWVKDTHSVLREIHQSIFLEQVFDRVNHESYCTSPGIHVTGMLE 1250
                N+++  T++D   ++K+T+S+LR++H +IF EQVFD VN E++  S GI+VTG+ E
Sbjct: 257  QSSVNREKEFTNDD--EYIKETNSLLRQVHHAIFSEQVFDLVNQEAFNPSVGINVTGIRE 314

Query: 1249 DLLQLAVGQDTSICMSLVSVKKEDDFLDSRGLSQKGNNGFTHSDSSALVVNNEKDEFNQN 1070
            + LQL++ Q TS+ +SLV   +    ++        N          + + +  D   + 
Sbjct: 315  NYLQLSIDQGTSVFISLVPSGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPL-EK 373

Query: 1069 NLEVPSPVGLEIYLVHIFHKNSLVRLKEKNFSASRVAVAGHAATESCGLT-HFCKTVAHR 893
             L  P+ +  EIYL  IFH+   V+  ++  S S    +G  + +  GL  HFC ++AHR
Sbjct: 374  KLRNPNHITFEIYLQQIFHELVFVKSNDRPIS-SLSRQSGQVSNDGSGLLGHFCLSLAHR 432

Query: 892  IFSTKVLAEIERLVSRIPYVQLLSHPPWHSRTSSWSLFLKFPESVFH-TACLSESSNNYD 716
            +F+  VL E+E +V ++P++QL+SHP W+SR SSW+ F++ P S+ H  +  + +S+ Y 
Sbjct: 433  MFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQ 492

Query: 715  VKGLIRPQIHTKIVVKDDQVTVSGEGALGTLCSF-GISADGSSMDSYGCXXXXXXXXXXX 539
            +  + + Q  TK+VV DD +T+ GEGA   +  F G S D  S + Y C           
Sbjct: 493  MNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILL 552

Query: 538  XXXXXXIRWLHDEALIVGMKVSRDFLCLYLELDQGDMLGLVARVDPDDVNGCISWWMIME 359
                  I WLH+EALI G+K +RDFL L  EL+QG+ L LVA VDP+D  GC+SWW++M+
Sbjct: 553  QVASQIILWLHEEALIWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMD 612

Query: 358  DGMADDGK--FSTNSGEYKNRRFLGHLSLEALYSMLMDLVNVSTNSLGGS 215
            DG+ +D K  F T+    + R+FLGHLSLE L+S LMDLV++  + +GGS
Sbjct: 613  DGLMEDRKLNFETSDVVPEYRKFLGHLSLEVLHSTLMDLVSL-CSGVGGS 661