BLASTX nr result

ID: Zingiber25_contig00010492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00010492
         (283 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...    62   3e-09
ref|XP_004496070.1| PREDICTED: protein FAR-RED IMPAIRED RESPONSE...    59   5e-07
ref|XP_002307977.2| hypothetical protein POPTR_0006s03800g, part...    56   6e-06
ref|XP_003606229.1| FAR1-related protein [Medicago truncatula] g...    56   6e-06

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 6/59 (10%)
 Frame = +2

Query: 119 IGMTFSSEEEVCTFYNSYAQNVGFGIYKLGGRNRDEGK*KYFSIGCAK------NSKNI 277
           IGMTFSSEEEV  +Y SYA+ +GFG  K+  +N  +GK KYF++GC +      NSKN+
Sbjct: 354 IGMTFSSEEEVIKYYKSYARCMGFGTVKINSKNAKDGK-KYFTLGCTRARSYVSNSKNL 411



 Score = 24.6 bits (52), Expect(2) = 3e-09
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 1   GEESVIEEEKSHSNEIKDNNDHAN 72
           G  S ++EE  H NE  D N  AN
Sbjct: 321 GSTSSVQEEVDHINENSDENLEAN 344


>ref|XP_004496070.1| PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like [Cicer
           arietinum]
          Length = 766

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/53 (50%), Positives = 39/53 (73%)
 Frame = +2

Query: 122 GMTFSSEEEVCTFYNSYAQNVGFGIYKLGGRNRDEGK*KYFSIGCAKNSKNIS 280
           GMTFSSEEEV  +Y +YA+ +GFGI K+  +N D+G+ KYF++ C+   K +S
Sbjct: 38  GMTFSSEEEVTKYYTNYAKRMGFGIGKISSKNGDDGR-KYFTLACSCARKYVS 89


>ref|XP_002307977.2| hypothetical protein POPTR_0006s03800g, partial [Populus
           trichocarpa] gi|550335401|gb|EEE91500.2| hypothetical
           protein POPTR_0006s03800g, partial [Populus trichocarpa]
          Length = 193

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/58 (44%), Positives = 38/58 (65%)
 Frame = +2

Query: 101 EVKLLEIGMTFSSEEEVCTFYNSYAQNVGFGIYKLGGRNRDEGK*KYFSIGCAKNSKN 274
           EV+  +IGM F+S+EEV  +YN YAQ VGFGI +   R  D+G+  Y  + C++  K+
Sbjct: 40  EVETPKIGMVFASQEEVRDYYNRYAQRVGFGIMRRSSRCDDDGRLTYIVLSCSQCGKD 97


>ref|XP_003606229.1| FAR1-related protein [Medicago truncatula]
           gi|355507284|gb|AES88426.1| FAR1-related protein
           [Medicago truncatula]
          Length = 446

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 6/57 (10%)
 Frame = +2

Query: 125 MTFSSEEEVCTFYNSYAQNVGFGIYKLGGRNRDEGK*KYFSIGC------AKNSKNI 277
           MTF+ EEEV  +Y SYA+ +GFG  K+  +N  +GK KYF++GC        N+KN+
Sbjct: 1   MTFNYEEEVTRYYKSYARCMGFGTVKINSKNAKDGKKKYFTLGCTCARSYVSNTKNL 57


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