BLASTX nr result
ID: Zingiber25_contig00010320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00010320
(713 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004984828.1| PREDICTED: RNA-binding protein 38-like isofo... 253 3e-65
ref|XP_004984827.1| PREDICTED: RNA-binding protein 38-like isofo... 253 6e-65
ref|NP_001049774.1| Os03g0286500 [Oryza sativa Japonica Group] g... 247 2e-63
gb|ACF82948.1| unknown [Zea mays] gi|414866250|tpg|DAA44807.1| T... 245 9e-63
ref|XP_002468050.1| hypothetical protein SORBIDRAFT_01g038700 [S... 244 2e-62
ref|XP_003561742.1| PREDICTED: uncharacterized protein LOC100843... 237 2e-60
gb|AAO16994.1| Hypothetical protein [Oryza sativa Japonica Group... 232 1e-58
gb|EEC75008.1| hypothetical protein OsI_11079 [Oryza sativa Indi... 232 1e-58
ref|NP_001136575.1| hypothetical protein [Zea mays] gi|194696232... 230 4e-58
gb|EMJ22033.1| hypothetical protein PRUPE_ppa026384mg, partial [... 223 5e-56
gb|EOY18527.1| RNA-binding family protein isoform 3 [Theobroma c... 216 4e-54
gb|EOY18526.1| RNA-binding family protein isoform 2 [Theobroma c... 216 4e-54
gb|EOY18525.1| RNA-binding family protein isoform 1 [Theobroma c... 216 4e-54
ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265... 216 4e-54
ref|XP_002523906.1| RNA-binding region-containing protein, putat... 214 2e-53
ref|XP_004307422.1| PREDICTED: uncharacterized protein LOC101308... 214 3e-53
ref|XP_006340455.1| PREDICTED: RNA-binding protein 38-like isofo... 210 3e-52
ref|XP_006340454.1| PREDICTED: RNA-binding protein 38-like isofo... 210 3e-52
ref|XP_002312040.1| RNA recognition motif-containing family prot... 209 9e-52
ref|XP_006485938.1| PREDICTED: RNA-binding protein 38-like isofo... 203 5e-50
>ref|XP_004984828.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Setaria italica]
Length = 303
Score = 253 bits (647), Expect = 3e-65
Identities = 134/256 (52%), Positives = 163/256 (63%), Gaps = 20/256 (7%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE K+ LREHF++YG+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 28 TKVFVGGLAWETHKDTLREHFERYGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 87
Query: 183 DATPVINGRRANCNLASLGAK---RGGGVIRHSPPSTPAPLSSRGGQP--PPPGMAVGSR 347
DATPVINGRRANCNLASLGAK + ++R SPP+TPAP + P P P +AVGSR
Sbjct: 88 DATPVINGRRANCNLASLGAKPRPQPPHLLRPSPPATPAPHAPALPSPHQPAPAIAVGSR 147
Query: 348 VVSPAPPAAQWYYQNPSGTPPPP---------FQLHQYHHGLLPFYSTSSAYAYSPNYMA 500
VSP P WYY +PS TPPPP HQ +HG+LPFY ++ Y YSPNY+A
Sbjct: 148 GVSPVP----WYY-HPSTTPPPPPPPPAAHYAHGAHQQYHGVLPFYPAATTYGYSPNYVA 202
Query: 501 DFGYNSKLSPTG------GGGYYHGQFSYPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQ 662
D YN+KL G Y G F+YP +P+YPF+H+ H
Sbjct: 203 DLSYNAKLGQAAAAAAGTAGSYMQGHFTYP-----AAQGGMVAPNGMMPVYPFYHYQYHG 257
Query: 663 SQGMALPATHFFPPSA 710
SQG+ +PA HFFPP++
Sbjct: 258 SQGLGVPAAHFFPPAS 273
>ref|XP_004984827.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Setaria italica]
Length = 304
Score = 253 bits (645), Expect = 6e-65
Identities = 134/257 (52%), Positives = 163/257 (63%), Gaps = 21/257 (8%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE K+ LREHF++YG+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 28 TKVFVGGLAWETHKDTLREHFERYGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 87
Query: 183 DATPVINGRRANCNLASLGAK---RGGGVIRHSPPSTPAPLS---SRGGQPPPPGMAVGS 344
DATPVINGRRANCNLASLGAK + ++R SPP+TPAP + QP P +AVGS
Sbjct: 88 DATPVINGRRANCNLASLGAKPRPQPPHLLRPSPPATPAPHAPALPSPHQPAPAAIAVGS 147
Query: 345 RVVSPAPPAAQWYYQNPSGTPPPP---------FQLHQYHHGLLPFYSTSSAYAYSPNYM 497
R VSP P WYY +PS TPPPP HQ +HG+LPFY ++ Y YSPNY+
Sbjct: 148 RGVSPVP----WYY-HPSTTPPPPPPPPAAHYAHGAHQQYHGVLPFYPAATTYGYSPNYV 202
Query: 498 ADFGYNSKLSPTG------GGGYYHGQFSYPXXXXXXXXXXXXXXXXXLPMYPFFHFHPH 659
AD YN+KL G Y G F+YP +P+YPF+H+ H
Sbjct: 203 ADLSYNAKLGQAAAAAAGTAGSYMQGHFTYP-----AAQGGMVAPNGMMPVYPFYHYQYH 257
Query: 660 QSQGMALPATHFFPPSA 710
SQG+ +PA HFFPP++
Sbjct: 258 GSQGLGVPAAHFFPPAS 274
>ref|NP_001049774.1| Os03g0286500 [Oryza sativa Japonica Group]
gi|108707565|gb|ABF95360.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548245|dbj|BAF11688.1| Os03g0286500 [Oryza sativa
Japonica Group]
Length = 310
Score = 247 bits (631), Expect = 2e-63
Identities = 132/256 (51%), Positives = 160/256 (62%), Gaps = 22/256 (8%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE K+ LREHF+++G+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 33 TKVFVGGLAWETHKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 92
Query: 183 DATPVINGRRANCNLASLGAK---RGGGVIRHSPPSTPAP----LSSRGGQPPPPGMAVG 341
DATPVINGRRANCNLASLGAK + ++R SPP+TP P L S P P +AVG
Sbjct: 93 DATPVINGRRANCNLASLGAKPRAQPPHLLRPSPPATPGPHAPALPSPHHHQPAPAIAVG 152
Query: 342 SRVVSPAPPAAQWYYQNPSGTPPPP----------FQLHQYHHGLLPFYSTSSAYAYSPN 491
SR VSP P WYY +PS TPPPP HQ +HG+LPFY ++ Y YSPN
Sbjct: 153 SRGVSPVP----WYY-HPSTTPPPPPPPAAHYAAHGGHHQQYHGVLPFYPAATTYGYSPN 207
Query: 492 YMADFGYNSKLSPTG-----GGGYYHGQFSYPXXXXXXXXXXXXXXXXXLPMYPFFHFHP 656
Y+AD YN+KL G Y G FSYP +P+YP++ +H
Sbjct: 208 YVADLSYNAKLGQAAAAHGTNGAYLQGHFSYP----AAAQGGMLAANGMMPVYPYYQYHY 263
Query: 657 HQSQGMALPATHFFPP 704
H +QG+ +PA HFFPP
Sbjct: 264 HGAQGLGVPAAHFFPP 279
>gb|ACF82948.1| unknown [Zea mays] gi|414866250|tpg|DAA44807.1| TPA: hypothetical
protein ZEAMMB73_243908 [Zea mays]
Length = 297
Score = 245 bits (626), Expect = 9e-63
Identities = 129/249 (51%), Positives = 159/249 (63%), Gaps = 15/249 (6%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE K+ALREHF++YG+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 26 TKVFVGGLAWETHKDALREHFERYGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 85
Query: 183 DATPVINGRRANCNLASLGAK--RGGGVIRHSPPSTPAPLSSR--GGQPPPPGMAVGSRV 350
DATPVINGRRANCNLA+LGAK ++R SPP+TPAP + P P +AVGSR
Sbjct: 86 DATPVINGRRANCNLAALGAKPRPPPHILRPSPPATPAPHAPALPSQHQPTPAIAVGSRG 145
Query: 351 VSPAPPAAQWYYQNPSGTPPPP------FQLHQYHHGLLPFYSTSSA-YAYSPNYMADFG 509
VSP P WYY +PS TPPPP HQ +HG+LPFY ++A Y Y+PNY+AD
Sbjct: 146 VSPVP----WYY-HPSTTPPPPAAHHYAHGAHQQYHGVLPFYPAAAATYGYAPNYVADLS 200
Query: 510 YNSKLSPTG----GGGYYHGQFSYPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMA 677
YN+K+ GG Y G F+YP +P+YPF+H+H + +
Sbjct: 201 YNAKVGQAAAGGTGGSYLQGHFAYPAAAAAQGGMVAAAPNGMVPVYPFYHYHQYHASQGG 260
Query: 678 LPATHFFPP 704
+ A HFFPP
Sbjct: 261 VAAAHFFPP 269
>ref|XP_002468050.1| hypothetical protein SORBIDRAFT_01g038700 [Sorghum bicolor]
gi|241921904|gb|EER95048.1| hypothetical protein
SORBIDRAFT_01g038700 [Sorghum bicolor]
Length = 310
Score = 244 bits (623), Expect = 2e-62
Identities = 134/256 (52%), Positives = 162/256 (63%), Gaps = 22/256 (8%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE K+ LREHF++YG+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 30 TKVFVGGLAWETHKDTLREHFERYGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 89
Query: 183 DATPVINGRRANCNLASLGAK---RGGGVIR--HSPPSTPAPLSSRGGQP--PPPGMAVG 341
DATPVINGRRANCNLASLGAK + ++R SPP+TPAP + P P P +AVG
Sbjct: 90 DATPVINGRRANCNLASLGAKPRPQPPHILRPGPSPPATPAPHAHALPSPHQPTPAIAVG 149
Query: 342 SRVVSPAPPAAQWYYQNPSGTPPPP--------FQLHQYHHGLLPFYSTSSAYAYSPNYM 497
SR VSP P WYY +PS TPPPP HQ +HG+LPFY ++ Y YSPNY+
Sbjct: 150 SRGVSPVP----WYY-HPSTTPPPPPPPAAHYAHGAHQQYHGVLPFYPAATTYGYSPNYV 204
Query: 498 ADFGYNSKLSPTGGGG------YYHGQFSYPXXXXXXXXXXXXXXXXXLPMYPFFHF-HP 656
AD YN+KL GG G F+YP +P+YPF+H+ +
Sbjct: 205 ADLSYNAKLGQAAAGGTAGSYLQPQGHFAYP--AAAQGGMHVAAPNGMMPVYPFYHYQYH 262
Query: 657 HQSQGMALPATHFFPP 704
H SQG+ +PA HFFPP
Sbjct: 263 HASQGLGVPAAHFFPP 278
>ref|XP_003561742.1| PREDICTED: uncharacterized protein LOC100843530 [Brachypodium
distachyon]
Length = 307
Score = 237 bits (605), Expect = 2e-60
Identities = 129/265 (48%), Positives = 158/265 (59%), Gaps = 31/265 (11%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE K+ LREHF+++G+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 20 TKVFVGGLAWETHKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 79
Query: 183 DATPVINGRRANCNLASLGAK-----RGGGVIRHSPPSTPAP-------LSSRGGQPPPP 326
D TPVINGRRANCNLASLGAK + ++R SPP+TPAP Q P P
Sbjct: 80 DGTPVINGRRANCNLASLGAKPRTQQQQPHLLRPSPPATPAPHMPAAPHHGHHHHQQPAP 139
Query: 327 GMAVGSRVVSPAPPAAQWYYQNPSGTPPPP--------------FQLHQYHHGLLPFYST 464
+ GSR +SP P WYY +PS TPPPP HQY HG+LPFY
Sbjct: 140 AIVAGSRGMSPVP----WYY-HPSTTPPPPPPPPQAPAHYGHGAHPQHQY-HGVLPFYPA 193
Query: 465 SSAYAYSPNYMADFGYNSKL-----SPTGGGGYYHGQFSYPXXXXXXXXXXXXXXXXXLP 629
++ Y YSPNY+AD YN+KL +P G Y G F YP +P
Sbjct: 194 ATNYGYSPNYVADLSYNAKLGQTAAAPGAAGSYMQGHFPYP--AAAAAQGGMLAPNAMMP 251
Query: 630 MYPFFHFHPHQSQGMALPATHFFPP 704
+YP++ +H H +QG+ +PA HFFPP
Sbjct: 252 VYPYYQYHYHGAQGLGVPAAHFFPP 276
>gb|AAO16994.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|125585859|gb|EAZ26523.1| hypothetical protein
OsJ_10418 [Oryza sativa Japonica Group]
Length = 339
Score = 232 bits (591), Expect = 1e-58
Identities = 132/285 (46%), Positives = 160/285 (56%), Gaps = 51/285 (17%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFV------------- 143
TKVFVGGLAWE K+ LREHF+++G+ILEAVIISDK++GRSKGYGFV
Sbjct: 33 TKVFVGGLAWETHKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVSSTTPRSHSRFRV 92
Query: 144 ----------------TFXXXXXXXXXCDDATPVINGRRANCNLASLGAK---RGGGVIR 266
TF C+DATPVINGRRANCNLASLGAK + ++R
Sbjct: 93 ATCARFGFLTVVWLQVTFKEADAAKKACEDATPVINGRRANCNLASLGAKPRAQPPHLLR 152
Query: 267 HSPPSTPAP----LSSRGGQPPPPGMAVGSRVVSPAPPAAQWYYQNPSGTPPPPFQL--- 425
SPP+TP P L S P P +AVGSR VSP P WYY +PS TPPPP
Sbjct: 153 PSPPATPGPHAPALPSPHHHQPAPAIAVGSRGVSPVP----WYY-HPSTTPPPPPPPAAH 207
Query: 426 -------HQYHHGLLPFYSTSSAYAYSPNYMADFGYNSKLSPTG-----GGGYYHGQFSY 569
HQ +HG+LPFY ++ Y YSPNY+AD YN+KL G Y G FSY
Sbjct: 208 YAAHGGHHQQYHGVLPFYPAATTYGYSPNYVADLSYNAKLGQAAAAHGTNGAYLQGHFSY 267
Query: 570 PXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPP 704
P +P+YP++ +H H +QG+ +PA HFFPP
Sbjct: 268 P----AAAQGGMLAANGMMPVYPYYQYHYHGAQGLGVPAAHFFPP 308
>gb|EEC75008.1| hypothetical protein OsI_11079 [Oryza sativa Indica Group]
Length = 454
Score = 232 bits (591), Expect = 1e-58
Identities = 132/285 (46%), Positives = 160/285 (56%), Gaps = 51/285 (17%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFV------------- 143
TKVFVGGLAWE K+ LREHF+++G+ILEAVIISDK++GRSKGYGFV
Sbjct: 33 TKVFVGGLAWETHKDTLREHFERFGDILEAVIISDKLTGRSKGYGFVSSTTPRSHSRFRV 92
Query: 144 ----------------TFXXXXXXXXXCDDATPVINGRRANCNLASLGAK---RGGGVIR 266
TF C+DATPVINGRRANCNLASLGAK + ++R
Sbjct: 93 ATCARFGFLTVVWLQVTFKEADAAKKACEDATPVINGRRANCNLASLGAKPRAQPPHLLR 152
Query: 267 HSPPSTPAP----LSSRGGQPPPPGMAVGSRVVSPAPPAAQWYYQNPSGTPPPPFQL--- 425
SPP+TP P L S P P +AVGSR VSP P WYY +PS TPPPP
Sbjct: 153 PSPPATPGPHAPALPSPHHHQPAPAIAVGSRGVSPVP----WYY-HPSTTPPPPPPPAAH 207
Query: 426 -------HQYHHGLLPFYSTSSAYAYSPNYMADFGYNSKLSPTG-----GGGYYHGQFSY 569
HQ +HG+LPFY ++ Y YSPNY+AD YN+KL G Y G FSY
Sbjct: 208 YAAHGGHHQQYHGVLPFYPAATTYGYSPNYVADLSYNAKLGQAAAAHGTNGAYLQGHFSY 267
Query: 570 PXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPP 704
P +P+YP++ +H H +QG+ +PA HFFPP
Sbjct: 268 P----AAAQGGMLAANGMMPVYPYYQYHYHGAQGLGVPAAHFFPP 308
Score = 86.7 bits (213), Expect = 7e-15
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Frame = +3
Query: 438 HGLLPFYSTSSAYAYSPNYMADFGYNSKLSPTG-----GGGYYHGQFSYPXXXXXXXXXX 602
HG+LPFY ++ Y YSPNY+AD YN+KL G Y G FSYP
Sbjct: 334 HGVLPFYPAATTYGYSPNYVADLSYNAKLGQAAAAHGTNGAYLQGHFSYP----AAAQGG 389
Query: 603 XXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPP 704
+P+YP++ +H H +QG+ +PA HFFPP
Sbjct: 390 MLAANGMMPVYPYYQYHYHGAQGLGVPAAHFFPP 423
>ref|NP_001136575.1| hypothetical protein [Zea mays] gi|194696232|gb|ACF82200.1| unknown
[Zea mays] gi|413956076|gb|AFW88725.1| hypothetical
protein ZEAMMB73_158124 [Zea mays]
Length = 279
Score = 230 bits (586), Expect = 4e-58
Identities = 120/237 (50%), Positives = 144/237 (60%), Gaps = 3/237 (1%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE + ALR HF +YG+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 25 TKVFVGGLAWETHEGALRGHFQRYGDILEAVIISDKLTGRSKGYGFVTFKEADAAKKACE 84
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRH-SPPSTPAPLSSRGGQPPPPGMAVGSRVVSP 359
DATPVINGRRANCNLASLGAK ++H PS P + P P +AVGSR VSP
Sbjct: 85 DATPVINGRRANCNLASLGAKPRPQPLQHVLRPSPPHAHALPSPHQPTPAIAVGSRSVSP 144
Query: 360 APPAAQWYYQNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYMADFGYNSKLSPTGG 539
P WYY + PPPP HQ +HG+LPFY ++ Y YSPNY+ D YN+K+
Sbjct: 145 VP----WYYHPSTTRPPPPPAAHQQYHGVLPFYPAAATYGYSPNYVTDLSYNTKVGQAAA 200
Query: 540 GGYYHGQFSYPXXXXXXXXXXXXXXXXXLPMYPFFH--FHPHQSQGMALPATHFFPP 704
G G SY +P+YPF+H +H SQG+ +PA HF PP
Sbjct: 201 AGTAAG--SYLQLQGHLAYQAAPAQGGMVPVYPFYHYPYHASHSQGLGVPAAHFLPP 255
>gb|EMJ22033.1| hypothetical protein PRUPE_ppa026384mg, partial [Prunus persica]
Length = 253
Score = 223 bits (568), Expect = 5e-56
Identities = 131/243 (53%), Positives = 148/243 (60%), Gaps = 6/243 (2%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEALREHFDKYGEILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 18 TKVFVGGLAWETPKEALREHFDKYGEILEAVIISDKLTGRSKGYGFVTFKEAEAAKKACE 77
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAP-LSSRGGQPPPPGMAVGSRVVSP 359
DATPVINGRRANCNLASLGA+R +PP P P S GG G+R +SP
Sbjct: 78 DATPVINGRRANCNLASLGARRPRSASTTTPPPPPPPQRGSNGG---------GARSMSP 128
Query: 360 APP-AAQWYYQNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYM-ADFGYNSKLSPT 533
AP QWYY P+GTP PF H HH +PF Y YSP Y+ AD YN KL T
Sbjct: 129 APANHVQWYYPAPAGTPATPF--HHQHHQPVPF------YGYSPTYIAADISYNHKLGYT 180
Query: 534 GGGGYYHGQFS---YPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPP 704
GG Y +G +S YP +PMYP +H+H HQS M LPA H FPP
Sbjct: 181 -GGAYMNGHYSPQVYP-------GQPMVGPNTLMPMYPLYHYH-HQSHTMGLPA-HIFPP 230
Query: 705 SAT 713
+ +
Sbjct: 231 TTS 233
>gb|EOY18527.1| RNA-binding family protein isoform 3 [Theobroma cacao]
Length = 254
Score = 216 bits (551), Expect = 4e-54
Identities = 131/239 (54%), Positives = 146/239 (61%), Gaps = 4/239 (1%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEA+REHF+KYGEILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 16 TKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKVTGRSKGYGFVTFKDPEAAKKACE 75
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGMAVGSRVVSPA 362
DATP+INGRRANCNLASLGA+R P S A PPP G VG R S A
Sbjct: 76 DATPIINGRRANCNLASLGARR--------PRSASA-------APPPQGSNVGPRAASAA 120
Query: 363 PP-AAQWYYQNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYM-ADFGYNSKLSPTG 536
P QWYY P+GTP PF H HH +PF Y YSP Y+ AD YN KLS T
Sbjct: 121 PANPVQWYY--PAGTPASPF--HHQHHQAVPF------YGYSPAYIAADISYNHKLSYT- 169
Query: 537 GGGYYHGQFS--YPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPPS 707
GG Y +G FS YP +PMYPF+H+ HQSQ M LPA H FPP+
Sbjct: 170 GGTYMNGPFSQVYP-------GQALVGANTLMPMYPFYHY--HQSQTMGLPA-HVFPPT 218
>gb|EOY18526.1| RNA-binding family protein isoform 2 [Theobroma cacao]
Length = 249
Score = 216 bits (551), Expect = 4e-54
Identities = 131/239 (54%), Positives = 146/239 (61%), Gaps = 4/239 (1%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEA+REHF+KYGEILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 16 TKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKVTGRSKGYGFVTFKDPEAAKKACE 75
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGMAVGSRVVSPA 362
DATP+INGRRANCNLASLGA+R P S A PPP G VG R S A
Sbjct: 76 DATPIINGRRANCNLASLGARR--------PRSASA-------APPPQGSNVGPRAASAA 120
Query: 363 PP-AAQWYYQNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYM-ADFGYNSKLSPTG 536
P QWYY P+GTP PF H HH +PF Y YSP Y+ AD YN KLS T
Sbjct: 121 PANPVQWYY--PAGTPASPF--HHQHHQAVPF------YGYSPAYIAADISYNHKLSYT- 169
Query: 537 GGGYYHGQFS--YPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPPS 707
GG Y +G FS YP +PMYPF+H+ HQSQ M LPA H FPP+
Sbjct: 170 GGTYMNGPFSQVYP-------GQALVGANTLMPMYPFYHY--HQSQTMGLPA-HVFPPT 218
>gb|EOY18525.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 256
Score = 216 bits (551), Expect = 4e-54
Identities = 131/239 (54%), Positives = 146/239 (61%), Gaps = 4/239 (1%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEA+REHF+KYGEILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 16 TKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKVTGRSKGYGFVTFKDPEAAKKACE 75
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGMAVGSRVVSPA 362
DATP+INGRRANCNLASLGA+R P S A PPP G VG R S A
Sbjct: 76 DATPIINGRRANCNLASLGARR--------PRSASA-------APPPQGSNVGPRAASAA 120
Query: 363 PP-AAQWYYQNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYM-ADFGYNSKLSPTG 536
P QWYY P+GTP PF H HH +PF Y YSP Y+ AD YN KLS T
Sbjct: 121 PANPVQWYY--PAGTPASPF--HHQHHQAVPF------YGYSPAYIAADISYNHKLSYT- 169
Query: 537 GGGYYHGQFS--YPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPPS 707
GG Y +G FS YP +PMYPF+H+ HQSQ M LPA H FPP+
Sbjct: 170 GGTYMNGPFSQVYP-------GQALVGANTLMPMYPFYHY--HQSQTMGLPA-HVFPPT 218
>ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
Length = 254
Score = 216 bits (551), Expect = 4e-54
Identities = 129/239 (53%), Positives = 146/239 (61%), Gaps = 4/239 (1%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEA+R+HF+KYGEILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 16 TKVFVGGLAWETPKEAMRDHFEKYGEILEAVIISDKLTGRSKGYGFVTFKEPEAAKKACE 75
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGMAVGSRVVSPA 362
DATP+INGRRANCNLASLGA+R P S+ PP G GSR S A
Sbjct: 76 DATPMINGRRANCNLASLGARR--------------PRSAASSTPPHQGSNGGSRPTSAA 121
Query: 363 PPA-AQWYYQNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYM-ADFGYNSKLSPTG 536
P + QWYY P+GTP PPF H HH +PF Y YSP Y+ AD YN KLS T
Sbjct: 122 PASHVQWYY--PAGTPAPPF--HHQHHQAVPF------YGYSPAYIAADISYNHKLSYT- 170
Query: 537 GGGYYHGQFS--YPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPPS 707
GG Y +G FS YP +PMYPF+HF HQSQ M PA H FPP+
Sbjct: 171 GGSYMNGHFSQVYP-------GQAMVGANALMPMYPFYHF--HQSQTMGHPA-HMFPPT 219
>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
gi|223536836|gb|EEF38475.1| RNA-binding
region-containing protein, putative [Ricinus communis]
Length = 256
Score = 214 bits (545), Expect = 2e-53
Identities = 126/237 (53%), Positives = 144/237 (60%), Gaps = 4/237 (1%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEA+REHF+KYGEILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 16 TKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKLTGRSKGYGFVTFKEPEAAKKACE 75
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGMAVGSRVVSPA 362
DATP+INGRRANCNLASLGA+R + PP P P PP G G R S A
Sbjct: 76 DATPMINGRRANCNLASLGARRPRSATQAPPPQPPPP------PPPQQGSNHGQRPSSAA 129
Query: 363 PP-AAQWYYQNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYMA-DFGYNSKLSPTG 536
P QWYY P+G+P P+ H +HH +PF Y Y+P Y+A D YN KLS T
Sbjct: 130 PANHVQWYY--PAGSPASPYH-HHHHHQAVPF------YGYTPTYVATDISYNHKLSYT- 179
Query: 537 GGGYYHGQFS--YPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFP 701
GG Y +G FS YP +PMYP +HF HQSQ M LPA H FP
Sbjct: 180 GGSYMNGHFSQVYP-------GQAIMGANTLMPMYPLYHF--HQSQTMGLPA-HIFP 226
>ref|XP_004307422.1| PREDICTED: uncharacterized protein LOC101308509 [Fragaria vesca
subsp. vesca]
Length = 257
Score = 214 bits (544), Expect = 3e-53
Identities = 129/244 (52%), Positives = 146/244 (59%), Gaps = 9/244 (3%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEALREHFDKYGEILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 16 TKVFVGGLAWETPKEALREHFDKYGEILEAVIISDKLTGRSKGYGFVTFKEAEAAKKACE 75
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGMAVGSRVVSPA 362
DATPVINGRRANCNLASLGA+R P S+ PPP G+R +SPA
Sbjct: 76 DATPVINGRRANCNLASLGARR--------------PRSASTTTPPPQR---GARSMSPA 118
Query: 363 PPAA-----QWYYQNPSGTPPP---PFQLHQYHHGLLPFYSTSSAYAYSPNYMA-DFGYN 515
P A QWYY P+GTP PF H HH +PF Y YSP Y+A D GYN
Sbjct: 119 PAPAPANHVQWYY--PAGTPAAASVPF--HHQHHQAVPF------YGYSPTYIATDMGYN 168
Query: 516 SKLSPTGGGGYYHGQFSYPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHF 695
KL + GGGY +G +S +PMYP +H+H HQS M LPA F
Sbjct: 169 HKLGYSTGGGYMNGHYS---PQVYHSHQPMVGPNTLMPMYPLYHYH-HQSHTMGLPA-QF 223
Query: 696 FPPS 707
FPP+
Sbjct: 224 FPPT 227
>ref|XP_006340455.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Solanum
tuberosum]
Length = 253
Score = 210 bits (535), Expect = 3e-52
Identities = 128/243 (52%), Positives = 148/243 (60%), Gaps = 8/243 (3%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEA++EHFDKYG+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 17 TKVFVGGLAWETPKEAMKEHFDKYGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACE 76
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGM-AVGSRVVSP 359
DATP+INGRRANCNLASLGA+R R SP TP P PP G VG R S
Sbjct: 77 DATPIINGRRANCNLASLGARRS----RPSPSITPPP-------PPQQGANVVGPRANSA 125
Query: 360 APPA-AQWYY---QNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYMA-DFGYNSKL 524
+P + QWYY + P PF HQ+HH LPF Y YSP Y+A D YN K+
Sbjct: 126 SPASHVQWYYPAAAPQAAAPASPFH-HQHHHQPLPF------YGYSPAYIATDVNYNHKV 178
Query: 525 SPTGGGGYYHGQFS--YPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFF 698
S GGGY +G FS YP +PMYP++HFH HQSQ M LPA H +
Sbjct: 179 S-YNGGGYMNGHFSQVYP-------------SQAMMPMYPYYHFH-HQSQTMGLPA-HIY 222
Query: 699 PPS 707
P+
Sbjct: 223 SPT 225
>ref|XP_006340454.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Solanum
tuberosum]
Length = 262
Score = 210 bits (535), Expect = 3e-52
Identities = 128/243 (52%), Positives = 148/243 (60%), Gaps = 8/243 (3%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEA++EHFDKYG+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 17 TKVFVGGLAWETPKEAMKEHFDKYGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACE 76
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGM-AVGSRVVSP 359
DATP+INGRRANCNLASLGA+R R SP TP P PP G VG R S
Sbjct: 77 DATPIINGRRANCNLASLGARRS----RPSPSITPPP-------PPQQGANVVGPRANSA 125
Query: 360 APPA-AQWYY---QNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYMA-DFGYNSKL 524
+P + QWYY + P PF HQ+HH LPF Y YSP Y+A D YN K+
Sbjct: 126 SPASHVQWYYPAAAPQAAAPASPFH-HQHHHQPLPF------YGYSPAYIATDVNYNHKV 178
Query: 525 SPTGGGGYYHGQFS--YPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFF 698
S GGGY +G FS YP +PMYP++HFH HQSQ M LPA H +
Sbjct: 179 S-YNGGGYMNGHFSQVYP-------------SQAMMPMYPYYHFH-HQSQTMGLPA-HIY 222
Query: 699 PPS 707
P+
Sbjct: 223 SPT 225
>ref|XP_002312040.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222851860|gb|EEE89407.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 251
Score = 209 bits (531), Expect = 9e-52
Identities = 127/240 (52%), Positives = 141/240 (58%), Gaps = 5/240 (2%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE KEALREHF+KYGEILEAVIISDKI+GRSKGYGFVTF C+
Sbjct: 16 TKVFVGGLAWETPKEALREHFEKYGEILEAVIISDKITGRSKGYGFVTFKEAGAANKACE 75
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGMAVGSRVVSPA 362
DA P+INGRRANCNLASLGA+R STPAP P + G R +PA
Sbjct: 76 DAAPIINGRRANCNLASLGARR-------PRSSTPAP------PQQGPNIIAGPR-STPA 121
Query: 363 PPA--AQWYYQNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYMA-DFGYNSKLSPT 533
PPA QWYY S P H HH +PF Y YSP Y+A D YN KLS T
Sbjct: 122 PPANHVQWYYPAGSAAASP---FHHQHHQAVPF------YGYSPAYIATDISYNHKLSYT 172
Query: 534 GGGGYYHGQFS--YPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPPS 707
GG Y +G FS YP +PMYP +HF HQSQ + LPA H FPP+
Sbjct: 173 -GGSYMNGHFSQVYP-------GQAMVGANTLMPMYPLYHF--HQSQAVGLPAAHIFPPN 222
>ref|XP_006485938.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Citrus sinensis]
Length = 254
Score = 203 bits (516), Expect = 5e-50
Identities = 128/240 (53%), Positives = 143/240 (59%), Gaps = 5/240 (2%)
Frame = +3
Query: 3 TKVFVGGLAWEMQKEALREHFDKYGEILEAVIISDKISGRSKGYGFVTFXXXXXXXXXCD 182
TKVFVGGLAWE +EALREHFDKYG+ILEAVIISDK++GRSKGYGFVTF C+
Sbjct: 19 TKVFVGGLAWETPREALREHFDKYGDILEAVIISDKLTGRSKGYGFVTFKEPEAAKKACE 78
Query: 183 DATPVINGRRANCNLASLGAKRGGGVIRHSPPSTPAPLSSRGGQPPPPGMAVGSRVVSPA 362
DATP+INGRRANCNLASLGA+R P S A PP G VG R S A
Sbjct: 79 DATPIINGRRANCNLASLGARR--------PRSASA-------TPPQQGSNVGPRSTSSA 123
Query: 363 PP-AAQWYYQNPSGTPPPPFQLHQYHHGLLPFYSTSSAYAYSPNYMA-DFGYNS-KLSPT 533
P QWYY P+GTP PF HQ HH +PF Y YSP +A D YN KLS T
Sbjct: 124 PANHVQWYY--PAGTPATPFHHHQ-HHQAVPF------YGYSPTCIATDVSYNQHKLSYT 174
Query: 534 GGGGYYHGQF--SYPXXXXXXXXXXXXXXXXXLPMYPFFHFHPHQSQGMALPATHFFPPS 707
GG Y +G F YP +P+YP +HF HQSQ M LPA H FPP+
Sbjct: 175 -GGSYVNGHFPQMYP------GQPIVGATNTLMPIYPLYHF--HQSQTMGLPA-HIFPPT 224