BLASTX nr result
ID: Zingiber25_contig00010241
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00010241
(314 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004975787.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 135 6e-30
ref|XP_002454043.1| hypothetical protein SORBIDRAFT_04g023630 [S... 134 2e-29
emb|CAH67102.1| H0818E04.19 [Oryza sativa Indica Group] 134 2e-29
ref|NP_001052939.1| Os04g0450400 [Oryza sativa Japonica Group] g... 134 2e-29
ref|XP_003579865.1| PREDICTED: RING-H2 finger protein ATL52-like... 133 2e-29
dbj|BAJ87544.1| predicted protein [Hordeum vulgare subsp. vulgare] 130 1e-28
ref|NP_001140381.1| uncharacterized LOC100272434 [Zea mays] gi|1... 130 2e-28
gb|AFK34021.1| unknown [Medicago truncatula] 129 3e-28
ref|XP_003608413.1| RING-H2 finger protein ATL1O [Medicago trunc... 129 3e-28
gb|ESW31127.1| hypothetical protein PHAVU_002G211600g [Phaseolus... 129 4e-28
ref|NP_001173031.1| Os02g0572350 [Oryza sativa Japonica Group] g... 129 5e-28
dbj|BAJ85081.1| predicted protein [Hordeum vulgare subsp. vulgare] 129 5e-28
ref|XP_002447933.1| hypothetical protein SORBIDRAFT_06g018375 [S... 129 5e-28
ref|XP_004979696.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 128 7e-28
ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like... 128 9e-28
ref|XP_002310500.2| hypothetical protein POPTR_0007s03610g, part... 127 1e-27
ref|XP_006648769.1| PREDICTED: RING-H2 finger protein ATL54-like... 127 2e-27
gb|AFW62692.1| putative RING zinc finger domain superfamily prot... 127 2e-27
dbj|BAD19749.1| zinc finger (C3HC4-type RING finger) family prot... 126 3e-27
ref|XP_003545702.1| PREDICTED: RING-H2 finger protein ATL54-like... 126 3e-27
>ref|XP_004975787.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Setaria
italica]
Length = 425
Score = 135 bits (340), Expect = 6e-30
Identities = 62/102 (60%), Positives = 79/102 (77%), Gaps = 2/102 (1%)
Frame = +3
Query: 9 GEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPK 188
G V HHVWYIRT GLD++ I +IA Y+A G+LGA ++C+VCL EF+DGEL+RLLPK
Sbjct: 164 GGVVHHVWYIRTVGLDEAAINSIAATRYRAGAGLLGA--ADCSVCLGEFRDGELVRLLPK 221
Query: 189 CDHAFHMGCVDTWLRSHVNCPLCRAPVV--ALVSTTSDGVHG 308
C HAFH+ C+DTWLR+HVNCPLCR+ V+ A+ + T DG G
Sbjct: 222 CGHAFHVPCIDTWLRAHVNCPLCRSDVIDPAVTAATGDGGGG 263
>ref|XP_002454043.1| hypothetical protein SORBIDRAFT_04g023630 [Sorghum bicolor]
gi|241933874|gb|EES07019.1| hypothetical protein
SORBIDRAFT_04g023630 [Sorghum bicolor]
Length = 363
Score = 134 bits (336), Expect = 2e-29
Identities = 62/102 (60%), Positives = 76/102 (74%)
Frame = +3
Query: 6 DGEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLP 185
+GEV HH W+IRT GLDD+ I +IA Y+ +GVLGA S+C VCL EFQDGELLRLLP
Sbjct: 112 EGEVVHHAWHIRTVGLDDAAIESIALTRYR--DGVLGAAASDCTVCLGEFQDGELLRLLP 169
Query: 186 KCDHAFHMGCVDTWLRSHVNCPLCRAPVVALVSTTSDGVHGA 311
KC HAFH+ C+DTWLR+HV+CPLCRA V+ + + GA
Sbjct: 170 KCAHAFHVQCIDTWLRAHVSCPLCRADVMVDHAAAAAAAAGA 211
>emb|CAH67102.1| H0818E04.19 [Oryza sativa Indica Group]
Length = 514
Score = 134 bits (336), Expect = 2e-29
Identities = 59/100 (59%), Positives = 77/100 (77%)
Frame = +3
Query: 9 GEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPK 188
G V HH+WYIRT GLD++ I +IA Y+A G+LGA ++C+VCL EFQDGEL+RLLPK
Sbjct: 262 GGVVHHIWYIRTVGLDEAAIDSIAATRYRAGAGLLGA--ADCSVCLGEFQDGELVRLLPK 319
Query: 189 CDHAFHMGCVDTWLRSHVNCPLCRAPVVALVSTTSDGVHG 308
C HAFH+ C+DTWLR+HVNCPLCR+ V+ +T ++ G
Sbjct: 320 CGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 359
>ref|NP_001052939.1| Os04g0450400 [Oryza sativa Japonica Group]
gi|21740712|emb|CAD40833.1| OSJNBa0086B14.5 [Oryza
sativa Japonica Group] gi|113564510|dbj|BAF14853.1|
Os04g0450400 [Oryza sativa Japonica Group]
gi|125548510|gb|EAY94332.1| hypothetical protein
OsI_16100 [Oryza sativa Indica Group]
gi|125590562|gb|EAZ30912.1| hypothetical protein
OsJ_14993 [Oryza sativa Japonica Group]
Length = 415
Score = 134 bits (336), Expect = 2e-29
Identities = 59/100 (59%), Positives = 77/100 (77%)
Frame = +3
Query: 9 GEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPK 188
G V HH+WYIRT GLD++ I +IA Y+A G+LGA ++C+VCL EFQDGEL+RLLPK
Sbjct: 163 GGVVHHIWYIRTVGLDEAAIDSIAATRYRAGAGLLGA--ADCSVCLGEFQDGELVRLLPK 220
Query: 189 CDHAFHMGCVDTWLRSHVNCPLCRAPVVALVSTTSDGVHG 308
C HAFH+ C+DTWLR+HVNCPLCR+ V+ +T ++ G
Sbjct: 221 CGHAFHVPCIDTWLRAHVNCPLCRSDVLGPAATATESGGG 260
>ref|XP_003579865.1| PREDICTED: RING-H2 finger protein ATL52-like [Brachypodium
distachyon]
Length = 396
Score = 133 bits (335), Expect = 2e-29
Identities = 60/98 (61%), Positives = 76/98 (77%)
Frame = +3
Query: 9 GEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPK 188
G V HHVWYIRT GLD++ I +IA Y+A G+LGA ++C+VCL EFQDGEL+RLLPK
Sbjct: 153 GGVVHHVWYIRTVGLDEAAIDSIAVTRYRAGAGLLGA--ADCSVCLGEFQDGELVRLLPK 210
Query: 189 CDHAFHMGCVDTWLRSHVNCPLCRAPVVALVSTTSDGV 302
C HAFH+ C+DTWLR+HVNCPLCR+ V+ + + GV
Sbjct: 211 CAHAFHVPCIDTWLRAHVNCPLCRSDVLDPAAAAATGV 248
>dbj|BAJ87544.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 398
Score = 130 bits (328), Expect = 1e-28
Identities = 57/88 (64%), Positives = 71/88 (80%)
Frame = +3
Query: 9 GEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPK 188
G V HHVWYIRT GLD++ I +IA Y+A G+LGA ++C+VCL EF DGEL+RLLPK
Sbjct: 157 GGVVHHVWYIRTVGLDEAAIDSIAVTPYRAGSGLLGA--ADCSVCLGEFNDGELVRLLPK 214
Query: 189 CDHAFHMGCVDTWLRSHVNCPLCRAPVV 272
C HAFH+ C+DTWLR+HVNCPLCR+ V+
Sbjct: 215 CGHAFHVPCIDTWLRAHVNCPLCRSDVI 242
>ref|NP_001140381.1| uncharacterized LOC100272434 [Zea mays] gi|194699246|gb|ACF83707.1|
unknown [Zea mays] gi|194700528|gb|ACF84348.1| unknown
[Zea mays] gi|414586980|tpg|DAA37551.1| TPA: putative
RING zinc finger domain superfamily protein [Zea mays]
Length = 419
Score = 130 bits (327), Expect = 2e-28
Identities = 60/102 (58%), Positives = 76/102 (74%)
Frame = +3
Query: 9 GEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPK 188
G V HHVW IRT GLD+++I +IA Y+A G+LGA ++C+VCL EFQDGEL+RLLPK
Sbjct: 161 GGVVHHVWNIRTVGLDEASISSIAATRYRAGAGLLGA--ADCSVCLGEFQDGELVRLLPK 218
Query: 189 CDHAFHMGCVDTWLRSHVNCPLCRAPVVALVSTTSDGVHGAS 314
C HAFH+ C+DTWLR+HVNCP+CR+ V+ T G G S
Sbjct: 219 CAHAFHVPCIDTWLRAHVNCPVCRSDVLDPAVTADSGGGGES 260
>gb|AFK34021.1| unknown [Medicago truncatula]
Length = 360
Score = 129 bits (325), Expect = 3e-28
Identities = 58/91 (63%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 DDGEV-DHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRL 179
DDG V DH +WYIRT GL S I AI YK DEG++ S+C+VCLSEF++ E LRL
Sbjct: 110 DDGSVVDHPIWYIRTPGLQQSIINAITVVKYKKDEGLIDG--SDCSVCLSEFEEDENLRL 167
Query: 180 LPKCDHAFHMGCVDTWLRSHVNCPLCRAPVV 272
LPKC+HAFH+ C+DTWLRSH+NCP+CRAP+V
Sbjct: 168 LPKCNHAFHLPCIDTWLRSHINCPMCRAPIV 198
>ref|XP_003608413.1| RING-H2 finger protein ATL1O [Medicago truncatula]
gi|355509468|gb|AES90610.1| RING-H2 finger protein ATL1O
[Medicago truncatula]
Length = 360
Score = 129 bits (325), Expect = 3e-28
Identities = 58/91 (63%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 DDGEV-DHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRL 179
DDG V DH +WYIRT GL S I AI YK DEG++ S+C+VCLSEF++ E LRL
Sbjct: 110 DDGSVVDHPIWYIRTPGLQQSIINAITVVKYKKDEGLIDG--SDCSVCLSEFEEDENLRL 167
Query: 180 LPKCDHAFHMGCVDTWLRSHVNCPLCRAPVV 272
LPKC+HAFH+ C+DTWLRSH+NCP+CRAP+V
Sbjct: 168 LPKCNHAFHLPCIDTWLRSHINCPMCRAPIV 198
>gb|ESW31127.1| hypothetical protein PHAVU_002G211600g [Phaseolus vulgaris]
Length = 314
Score = 129 bits (324), Expect = 4e-28
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = +3
Query: 15 VDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPKCD 194
VDH +WYIRT GL S IGAI YK DEG++ S C+VCLSEF++ E LRLLPKC+
Sbjct: 87 VDHPIWYIRTTGLQQSVIGAITVCKYKKDEGLIEG--SECSVCLSEFEEDESLRLLPKCN 144
Query: 195 HAFHMGCVDTWLRSHVNCPLCRAPVV 272
HAFH+ C+DTWLRSH NCP+CRAP+V
Sbjct: 145 HAFHLPCIDTWLRSHTNCPMCRAPIV 170
>ref|NP_001173031.1| Os02g0572350 [Oryza sativa Japonica Group]
gi|46806010|dbj|BAD17284.1| zinc finger (C3HC4-type RING
finger)-like protein [Oryza sativa Japonica Group]
gi|255671016|dbj|BAH91760.1| Os02g0572350 [Oryza sativa
Japonica Group]
Length = 325
Score = 129 bits (323), Expect = 5e-28
Identities = 59/101 (58%), Positives = 74/101 (73%)
Frame = +3
Query: 6 DGEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLP 185
+GEV HH W+IRT GLD++ I +IA Y+A G+LGA ++C VCL EF+DGELLRLLP
Sbjct: 69 EGEVLHHAWHIRTVGLDEAAIESIALARYRAGAGMLGA--TDCPVCLGEFRDGELLRLLP 126
Query: 186 KCDHAFHMGCVDTWLRSHVNCPLCRAPVVALVSTTSDGVHG 308
KC HAFH+ C+D WLR+HVNCPLCRA V+ +D G
Sbjct: 127 KCGHAFHVPCIDAWLRAHVNCPLCRAHVLHPADADADAGDG 167
>dbj|BAJ85081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 129 bits (323), Expect = 5e-28
Identities = 58/99 (58%), Positives = 72/99 (72%)
Frame = +3
Query: 3 DDGEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLL 182
+D EV HH W+IRT GLD++TI ++A Y+A G ++C+VCL EF DGELLRLL
Sbjct: 103 EDEEVVHHAWHIRTVGLDEATIESVALTRYRAGAGTTLGGAADCSVCLGEFLDGELLRLL 162
Query: 183 PKCDHAFHMGCVDTWLRSHVNCPLCRAPVVALVSTTSDG 299
PKC HAFH+ C+ TWLR+HVNCPLCRA VV L S + G
Sbjct: 163 PKCGHAFHVPCIGTWLRAHVNCPLCRADVVVLDSAATAG 201
>ref|XP_002447933.1| hypothetical protein SORBIDRAFT_06g018375 [Sorghum bicolor]
gi|241939116|gb|EES12261.1| hypothetical protein
SORBIDRAFT_06g018375 [Sorghum bicolor]
Length = 420
Score = 129 bits (323), Expect = 5e-28
Identities = 57/88 (64%), Positives = 72/88 (81%)
Frame = +3
Query: 9 GEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPK 188
G V HHVW IRT GLD+++I +IA Y+A G+LGA ++C+VCL EFQDGEL+RLLPK
Sbjct: 164 GGVVHHVWNIRTVGLDEASISSIAVTRYRAGAGLLGA--ADCSVCLGEFQDGELVRLLPK 221
Query: 189 CDHAFHMGCVDTWLRSHVNCPLCRAPVV 272
C HAFH+ C+DTWLR+HVNCP+CR+ VV
Sbjct: 222 CAHAFHVPCIDTWLRAHVNCPICRSDVV 249
>ref|XP_004979696.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Setaria
italica]
Length = 399
Score = 128 bits (322), Expect = 7e-28
Identities = 66/113 (58%), Positives = 78/113 (69%), Gaps = 10/113 (8%)
Frame = +3
Query: 6 DGEVDHHVWYIRTAGLDDSTIGAIATWTYKA---------DEGVLGALRSNCAVCLSEFQ 158
DG HHVWYIRT GLD+ I AIA Y A D+G G+ CAVCL+EF+
Sbjct: 167 DGGGVHHVWYIRTKGLDERAIAAIAAVVYDAGKKRGAGAVDDGGDGS----CAVCLAEFR 222
Query: 159 DGELLRLLPKCDHAFHMGCVDTWLRSHVNCPLCRAPV-VALVSTTSDGVHGAS 314
DGE LRLLP+C HAFH GC+DTWLR+HVNCPLCRAPV VA + +S+ V GA+
Sbjct: 223 DGETLRLLPRCGHAFHRGCIDTWLRAHVNCPLCRAPVQVAAAAASSNTVPGAA 275
>ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
Length = 403
Score = 128 bits (321), Expect = 9e-28
Identities = 57/93 (61%), Positives = 70/93 (75%)
Frame = +3
Query: 15 VDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPKCD 194
VDH +WYIRT GL S I AI YK EG++ ++CAVCLSEFQ+ E LRLLPKC
Sbjct: 144 VDHPIWYIRTLGLQQSIINAITVCKYKKGEGLIEG--TDCAVCLSEFQEDENLRLLPKCQ 201
Query: 195 HAFHMGCVDTWLRSHVNCPLCRAPVVALVSTTS 293
HAFH+ C+DTWLRSH NCP+CRAP+VA + ++S
Sbjct: 202 HAFHLPCIDTWLRSHTNCPMCRAPIVAEIESSS 234
>ref|XP_002310500.2| hypothetical protein POPTR_0007s03610g, partial [Populus
trichocarpa] gi|550334061|gb|EEE90950.2| hypothetical
protein POPTR_0007s03610g, partial [Populus trichocarpa]
Length = 311
Score = 127 bits (320), Expect = 1e-27
Identities = 57/91 (62%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 DDGEV-DHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRL 179
D+G V DH +WYIRT GL S IG+I + YK+ +G++ + C+VCLSEFQD E LRL
Sbjct: 67 DEGRVVDHPIWYIRTVGLQPSVIGSIRVFKYKSGDGLVEG--TECSVCLSEFQDDETLRL 124
Query: 180 LPKCDHAFHMGCVDTWLRSHVNCPLCRAPVV 272
LPKC HAFH+ C+DTWLRSH NCPLCRAP+V
Sbjct: 125 LPKCSHAFHIPCIDTWLRSHTNCPLCRAPIV 155
>ref|XP_006648769.1| PREDICTED: RING-H2 finger protein ATL54-like [Oryza brachyantha]
Length = 349
Score = 127 bits (318), Expect = 2e-27
Identities = 56/90 (62%), Positives = 72/90 (80%)
Frame = +3
Query: 3 DDGEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLL 182
++ EV HH W+IRT GLD++ I +IA Y+A G+LGA ++C+VCL EF+DGELLRLL
Sbjct: 109 EEEEVLHHAWHIRTVGLDEAAIESIALTRYRAGAGMLGA--TDCSVCLGEFRDGELLRLL 166
Query: 183 PKCDHAFHMGCVDTWLRSHVNCPLCRAPVV 272
PKC HAFH+ C+D WLR+HVNCPLCRA V+
Sbjct: 167 PKCGHAFHVPCIDAWLRAHVNCPLCRADVL 196
>gb|AFW62692.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 331
Score = 127 bits (318), Expect = 2e-27
Identities = 61/88 (69%), Positives = 71/88 (80%)
Frame = +3
Query: 9 GEVDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPK 188
GEV HHVW+IRT GLD++ I +IA Y A GVLGA S+C VCL EFQDGELLRLLPK
Sbjct: 105 GEVVHHVWHIRTVGLDNAAIESIALTRYCAG-GVLGA--SDCTVCLGEFQDGELLRLLPK 161
Query: 189 CDHAFHMGCVDTWLRSHVNCPLCRAPVV 272
C HAFH+ C+DTWLR+HV+CPLCRA V+
Sbjct: 162 CAHAFHVECIDTWLRAHVSCPLCRADVM 189
>dbj|BAD19749.1| zinc finger (C3HC4-type RING finger) family protein-like [Oryza
sativa Japonica Group] gi|47848401|dbj|BAD22259.1| zinc
finger (C3HC4-type RING finger) family protein-like
[Oryza sativa Japonica Group]
gi|222641748|gb|EEE69880.1| hypothetical protein
OsJ_29697 [Oryza sativa Japonica Group]
Length = 357
Score = 126 bits (317), Expect = 3e-27
Identities = 59/96 (61%), Positives = 73/96 (76%), Gaps = 3/96 (3%)
Frame = +3
Query: 21 HHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPKCDHA 200
HHVWYIRT GLD++TI +IAT Y+A G G +CAVCL EF+DGEL+RLLP+C H
Sbjct: 124 HHVWYIRTVGLDEATITSIATAEYRAGVGWGG----DCAVCLGEFRDGELVRLLPRCSHP 179
Query: 201 FHMGCVDTWLRSHVNCPLCRAPVVA---LVSTTSDG 299
FH C+DTWLR+HVNCPLCR+PVV L +T ++G
Sbjct: 180 FHAPCIDTWLRAHVNCPLCRSPVVVPSDLPATATEG 215
>ref|XP_003545702.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
Length = 385
Score = 126 bits (317), Expect = 3e-27
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = +3
Query: 15 VDHHVWYIRTAGLDDSTIGAIATWTYKADEGVLGALRSNCAVCLSEFQDGELLRLLPKCD 194
VDH +WYIRT GL S I AI YK EG++ ++CAVCLSEFQ+ E LRLLPKC
Sbjct: 130 VDHPIWYIRTLGLQQSIINAITVCKYKKGEGLIEG--TDCAVCLSEFQEDENLRLLPKCH 187
Query: 195 HAFHMGCVDTWLRSHVNCPLCRAPVVALVST 287
HAFH+ C+DTWLRSH NCP+CRAP+VA ++T
Sbjct: 188 HAFHLPCIDTWLRSHTNCPMCRAPIVADLAT 218