BLASTX nr result
ID: Zingiber25_contig00009991
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00009991
(883 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262... 220 6e-55
gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis] 205 2e-50
emb|CBI37628.3| unnamed protein product [Vitis vinifera] 204 4e-50
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260... 199 1e-48
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 199 1e-48
gb|EOY19919.1| Transcription elongation factor (TFIIS) family pr... 196 7e-48
ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832... 196 7e-48
gb|EOX92591.1| Transcription elongation factor (TFIIS) family pr... 194 4e-47
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260... 194 4e-47
gb|EEC67739.1| hypothetical protein OsI_35248 [Oryza sativa Indi... 194 4e-47
gb|AAX96488.1| AT5g09850/MYH9_6 [Oryza sativa Japonica Group] gi... 194 5e-47
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 192 1e-46
ref|NP_001065836.1| Os11g0166800 [Oryza sativa Japonica Group] g... 192 1e-46
ref|XP_006664368.1| PREDICTED: probable mediator of RNA polymera... 192 1e-46
ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citr... 192 1e-46
ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group] g... 192 2e-46
gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japo... 192 2e-46
gb|EOY19920.1| Transcription elongation factor (TFIIS) family pr... 191 3e-46
ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymera... 190 7e-46
ref|XP_004978772.1| PREDICTED: probable mediator of RNA polymera... 189 9e-46
>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product
[Vitis vinifera]
Length = 332
Score = 220 bits (560), Expect = 6e-55
Identities = 121/215 (56%), Positives = 154/215 (71%), Gaps = 5/215 (2%)
Frame = +3
Query: 252 RSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRHVNNH 431
R SI+EE+ KILAIK+ L+D DQ EDSLV LLQ+LADMDITFK LKETDIGRHVN
Sbjct: 93 RDRDGSIDEEQSKILAIKERLEDPDQLEDSLVDLLQSLADMDITFKALKETDIGRHVNRL 152
Query: 432 RKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTASPAIISNGDSPQQIHGRNSQN-GN 608
RKHPSNEVR+LVKQLVRKWKDLVDEW K ++ +T + AI+++GDSPQQ H +++ N +
Sbjct: 153 RKHPSNEVRRLVKQLVRKWKDLVDEWVKLSTPGETTASAIVADGDSPQQNHLKSTSNVHH 212
Query: 609 QIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPA----QNPARYNGSSTRPLSSASLAK 776
Q+P+F SPN + + G +E + K+ A + P + N + P +S +L K
Sbjct: 213 QVPDFAYSPNP----HNGSSGSDKNNVELEPKRKAVPRRETPNKPNQTPPIP-TSVALNK 267
Query: 777 AKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 881
+EQ+D+ D EKLA AR+RLHENY EAQNAKKQR
Sbjct: 268 QREQKDSLVDEEKLASARRRLHENYQEAQNAKKQR 302
>gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]
Length = 418
Score = 205 bits (522), Expect = 2e-50
Identities = 134/297 (45%), Positives = 174/297 (58%), Gaps = 4/297 (1%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
R RRDGIV+RLY+A P RE K G E SP P
Sbjct: 37 RQRRDGIVERLYAASSSSSASDHHR-----PRHYDREA---------KTAGEKERVSP-P 81
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQN 362
+P S++ Y ++E++KIL IK+ L+D+DQ ED+LV LLQ+
Sbjct: 82 TPQSIDRENSDNDGEGLDP------YGGLFDDEQKKILEIKEQLEDSDQSEDTLVELLQS 135
Query: 363 LADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTAS 542
LADMDITF+ LKETDIGRHVN RKHPS+EV++LVKQ+VRKWKD VDEW K N + AS
Sbjct: 136 LADMDITFQALKETDIGRHVNRLRKHPSSEVKRLVKQVVRKWKDTVDEWVKLNQPGEHAS 195
Query: 543 PAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPAQN 719
+++ +GDSPQQ + QNG +Q+P+F SPN + G ++ +SEP + P++
Sbjct: 196 NSLM-DGDSPQQ---KIPQNGHHQVPDFAYSPNPHN-GSSGSDKNNSEPEQKPKAVPSRR 250
Query: 720 ---PARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 881
P N S + S + +EQR+ S DAEKLA ARKRL ENY EA+NAKKQR
Sbjct: 251 EALPKPMNPSVPQSAHSTPQNRQREQREGSFDAEKLASARKRLQENYKEAENAKKQR 307
>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 204 bits (519), Expect = 4e-50
Identities = 127/294 (43%), Positives = 166/294 (56%), Gaps = 1/294 (0%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
R RRDGIV+R+Y + + + EK + +P
Sbjct: 37 RHRRDGIVERMYMSSRCGSCNLRY-----------QHSGLDKGCDEEKEDEKDDEKDKSP 85
Query: 183 -SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQ 359
+P S+N + + Y ++EE+ +IL IK+ L+ DQP+DS+V LLQ
Sbjct: 86 LTPQSINRSG------------SEDRYGGLLDEEEARILDIKEHLEAPDQPDDSIVDLLQ 133
Query: 360 NLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTA 539
LADMDITFK LKETDIGRHVN RKHPSN+VR+LVK LVRKWKDLVDEW KSN +
Sbjct: 134 TLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNPAGEFT 193
Query: 540 SPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPAQN 719
S A+++ GDSP Q R +Q+P+FG SPN G ++ ++EP E K K +
Sbjct: 194 SSALMAEGDSPPQKIPRTGH--HQVPDFGYSPNPQN-GSSGSDKNNAEP-EPKVKAIPRK 249
Query: 720 PARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 881
+ + P+SS S +QRD + D +K A ARKRLHENY EAQNAKKQR
Sbjct: 250 EVPTRPAQSAPVSS-SFPPPNKQRDTAIDPDKFASARKRLHENYQEAQNAKKQR 302
>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
vinifera]
Length = 331
Score = 199 bits (506), Expect = 1e-48
Identities = 127/294 (43%), Positives = 165/294 (56%), Gaps = 1/294 (0%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
R RRDGIV+R+Y + + + EK + +P
Sbjct: 37 RHRRDGIVERMYMSSRCGSCNLRY-----------QHSGLDKGCDEEKEDEKDDEKDKSP 85
Query: 183 -SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQ 359
+P S+N + + Y ++EE+ +IL IK+ L+ DQP+DS+V LLQ
Sbjct: 86 LTPQSINRSG------------SEDRYGGLLDEEEARILDIKEHLEAPDQPDDSIVDLLQ 133
Query: 360 NLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTA 539
LADMDITFK LKETDIGRHVN RKHPSN+VR+LVK LVRKWKDLVDEW KSN +
Sbjct: 134 TLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNPAGEFT 193
Query: 540 SPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPAQN 719
S A++ GDSP Q R +Q+P+FG SPN G ++ ++EP E K K +
Sbjct: 194 SSALM-EGDSPPQKIPRTGH--HQVPDFGYSPNPQN-GSSGSDKNNAEP-EPKVKAIPRK 248
Query: 720 PARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 881
+ + P+SS S +QRD + D +K A ARKRLHENY EAQNAKKQR
Sbjct: 249 EVPTRPAQSAPVSS-SFPPPNKQRDTAIDPDKFASARKRLHENYQEAQNAKKQR 301
>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical
protein [Ricinus communis]
Length = 362
Score = 199 bits (506), Expect = 1e-48
Identities = 126/302 (41%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
+ RRD IV+ LYS+ E + RS K G G SP+
Sbjct: 37 KQRRDKIVEMLYSSSGRCRNCDLDVGRIN-----NGHEIKERSHLESKGGGGGGSGSPST 91
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRS----YSHSIEEEKRKILAIKQFLDDTDQPEDSLVS 350
+P S++ Y+ ++E++KIL IKQ L+D DQ EDSLV
Sbjct: 92 TPRSIHGDEDVDVVNDDDDDDDDDDGLDPYAGLFDDEQKKILEIKQHLEDPDQSEDSLVD 151
Query: 351 LLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTN 530
LLQ+LADMDITFK LKETDIGRHVN RKH SN+VR+LVKQLVRKWKD+VDEW K N
Sbjct: 152 LLQSLADMDITFKALKETDIGRHVNQLRKHTSNDVRRLVKQLVRKWKDIVDEWVKLNPPG 211
Query: 531 DTASPAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK 707
AS ++++GDSP+Q + QNG +Q+P+F SPN + G ++ +SEP
Sbjct: 212 QHASSGLMADGDSPRQ---KFPQNGHHQVPDFAYSPNPHN-GSSGSDKNNSEPERRPKPV 267
Query: 708 PAQNPARYNGSSTRPLSSAS----LAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKK 875
P + + P+S+++ + ++QR+N+ D+++LA ARKRL NY EA+NAKK
Sbjct: 268 PRKEAPPRPAQQSVPVSASASHIVQRQREQQRENNFDSDRLASARKRLQANYKEAENAKK 327
Query: 876 QR 881
QR
Sbjct: 328 QR 329
>gb|EOY19919.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao]
Length = 337
Score = 196 bits (499), Expect = 7e-48
Identities = 126/298 (42%), Positives = 171/298 (57%), Gaps = 5/298 (1%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSP-T 179
+ RRDGIV+RLY+ + +E SP E + G G SP T
Sbjct: 37 KQRRDGIVERLYATSMVTRCKSCDFGERSNGYQVNKE-----GSPNEGKGGEGGRESPFT 91
Query: 180 PSPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQ 359
P D+ + Y ++E++++L IK+ L++ DQ EDSLV LLQ
Sbjct: 92 PQSDNEDGDLDP--------------YGGLFDDEQKRVLEIKESLEEPDQSEDSLVDLLQ 137
Query: 360 NLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTA 539
+LADMDITF+ LKETDIGRHVN RKH SN+VR+LVKQLVRKWK++VDEW + N +
Sbjct: 138 SLADMDITFQALKETDIGRHVNKLRKHSSNDVRRLVKQLVRKWKEIVDEWVRVNQPGELE 197
Query: 540 SPAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPAQ 716
S A++ +GDSPQQ + QNG Q+P+F SPN + G E +SEP +KP
Sbjct: 198 SAALM-DGDSPQQ---KLPQNGRQQVPDFAYSPNPHN-GSFGLEKNNSEP----ERKPKP 248
Query: 717 NPARYNGSSTRPLSSA---SLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 881
P RP S ++ + +EQ++++ D+E+LA ARKRL NY EA+NAKKQR
Sbjct: 249 IPPPRKDPPPRPTHSTPPQNVQRQREQKESNFDSERLASARKRLQANYKEAENAKKQR 306
>ref|XP_003578864.1| PREDICTED: uncharacterized protein LOC100832597 [Brachypodium
distachyon]
Length = 342
Score = 196 bits (499), Expect = 7e-48
Identities = 126/301 (41%), Positives = 166/301 (55%), Gaps = 8/301 (2%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
R+RRDGIV+RLY+A P A A SP E G G
Sbjct: 38 RARRDGIVERLYAAGSRCRNCDAVPQLARQPAAA----AAAALSPEEDADVDGLGEDEEE 93
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQN 362
+ D + KILAI+ FL+D DQ ED LVSLLQN
Sbjct: 94 ADDD------------------------EAAGAESKILAIRDFLEDPDQSEDELVSLLQN 129
Query: 363 LADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTAS 542
LADMDIT+K L++TDIGRHVN+ RKHPS EVRQLVK LVRKWK++VD W + +++
Sbjct: 130 LADMDITYKALQDTDIGRHVNSLRKHPSGEVRQLVKLLVRKWKEIVDGWVRLHNSGGDGG 189
Query: 543 PAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYS-SEPIETKAKK---- 707
+I+++GDSP++ G++ QN Q+ +F SP+ L+++ S + ET ++
Sbjct: 190 SSILTDGDSPEKTQGKSYQNA-QVSDFKYSPSPQRHNGLSSDRSSNNNGFETTMERHRAS 248
Query: 708 --PAQNPARYNGSST-RPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQ 878
P+ N + N S+ SSA +EQ+DN+ D EKL ARKRLHENY EAQNAKKQ
Sbjct: 249 PAPSYNQTKQNSSNNYSTTSSAPPRTMREQKDNNLDLEKLDSARKRLHENYQEAQNAKKQ 308
Query: 879 R 881
R
Sbjct: 309 R 309
>gb|EOX92591.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508700696|gb|EOX92592.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
Length = 336
Score = 194 bits (493), Expect = 4e-47
Identities = 124/296 (41%), Positives = 176/296 (59%), Gaps = 3/296 (1%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
+ RRD IV+RLY+ +K + R SS +KR G G+ P
Sbjct: 37 KQRRDRIVERLYATSMVTQCRNCDFGERPSDYEVKADLKR-ESSHEDKRRG---GSPNAP 92
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQN 362
D+ ++ Y ++E++KIL IK+ L++ Q EDSL+ LLQ+
Sbjct: 93 QSDNGDDELDP--------------YGGLFDDEQKKILEIKEHLEEPHQSEDSLIDLLQS 138
Query: 363 LADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTAS 542
LADMDITF+ LKETDIGRHVN RKH SN+VR+LVKQLVRKWK++VDEW + N + S
Sbjct: 139 LADMDITFQALKETDIGRHVNILRKHSSNDVRRLVKQLVRKWKEIVDEWVRLNQPGELES 198
Query: 543 PAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPAQN 719
A++++GDSPQ+ + QNG +Q+P+F SPN + G ++ +SEP +KP
Sbjct: 199 SALMADGDSPQR---KPPQNGYHQVPDFAYSPNPHN-GSSGSDKNNSEP----ERKPKPI 250
Query: 720 PARYNGSSTRPLSSASLA--KAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 881
P R N +P SA + + +EQ++++ D+E+LA ARKRL ENY EA+NAK+QR
Sbjct: 251 PPR-NEPPPKPTYSAPVLQNRQREQKESNFDSERLASARKRLQENYKEAENAKRQR 305
>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
vinifera]
Length = 305
Score = 194 bits (493), Expect = 4e-47
Identities = 123/294 (41%), Positives = 157/294 (53%), Gaps = 1/294 (0%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
R RRDGIV+R+Y + + + EK + +P
Sbjct: 37 RHRRDGIVERMYMSSRCGSCNLRY-----------QHSGLDKGCDEEKEDEKDDEKDKSP 85
Query: 183 -SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQ 359
+P S+N + + Y ++EE+ +IL IK+ L+ DQP+DS+V LLQ
Sbjct: 86 LTPQSINRSG------------SEDRYGGLLDEEEARILDIKEHLEAPDQPDDSIVDLLQ 133
Query: 360 NLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTA 539
LADMDITFK LKETDIGRHVN RKHPSN+VR+LVK LVRKWKDLVDEW KSN +
Sbjct: 134 TLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNPAGEFT 193
Query: 540 SPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPAQN 719
S A+++ GDSP Q R + Q+P+FG SPN
Sbjct: 194 SSALMAEGDSPPQKIPRTGHH--QVPDFGYSPNPQ------------------------- 226
Query: 720 PARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 881
NGSS ++A + K+QRD + D +K A ARKRLHENY EAQNAKKQR
Sbjct: 227 ----NGSSGSDKNNAE-PEPKKQRDTAIDPDKFASARKRLHENYQEAQNAKKQR 275
>gb|EEC67739.1| hypothetical protein OsI_35248 [Oryza sativa Indica Group]
Length = 338
Score = 194 bits (493), Expect = 4e-47
Identities = 126/301 (41%), Positives = 171/301 (56%), Gaps = 8/301 (2%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
R+RRDGIV+RLY+A A G GA T+P+P
Sbjct: 45 RARRDGIVERLYAA------------------------AGGGGG----NCGAAAATTPSP 76
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQN 362
++ + + + + KILAIK FL+D DQ ED L+SLLQ+
Sbjct: 77 RGAAVAEGEDDDDEA-----------AAAADGLEIKILAIKDFLEDEDQSEDELLSLLQS 125
Query: 363 LADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTAS 542
LADMDIT+K L+ETDIGRHVN RKHPS EVR LVKQL+RKWK++VD+W + ++++ AS
Sbjct: 126 LADMDITYKALQETDIGRHVNGLRKHPSGEVRLLVKQLIRKWKEIVDDWVRLHNSSGDAS 185
Query: 543 PAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK----- 707
+II++G+SP++I G+N Q+ +Q+ EF SP+ + ++E S+ A K
Sbjct: 186 NSIITDGNSPEKIQGKNQQS-SQVSEFKYSPSPSRHNNSSSERVSNGIASIAATKHRASP 244
Query: 708 -PAQNPARY--NGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQ 878
PA + AR N + SSA KEQ+D+ D E+L ARKRL ENY EAQNAKKQ
Sbjct: 245 APAHHNARQINNTHHSTTSSSAPARMVKEQKDSHLDLERLDSARKRLQENYQEAQNAKKQ 304
Query: 879 R 881
R
Sbjct: 305 R 305
>gb|AAX96488.1| AT5g09850/MYH9_6 [Oryza sativa Japonica Group]
gi|77548900|gb|ABA91697.1| transcription elongation
factor, putative, expressed [Oryza sativa Japonica
Group]
Length = 339
Score = 194 bits (492), Expect = 5e-47
Identities = 124/301 (41%), Positives = 169/301 (56%), Gaps = 8/301 (2%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
R+RRDGIV+RLY+A GA T+P+P
Sbjct: 46 RARRDGIVERLYAAGGGGGG----------------------------NCGAAAATTPSP 77
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQN 362
++ + + + + KILAIK FL+D DQ ED L+SLLQ+
Sbjct: 78 RGAAVAEGEDDDDEA-----------AAAADGLEIKILAIKDFLEDEDQSEDELLSLLQS 126
Query: 363 LADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTAS 542
LADMDIT+K L+ETDIGRHVN RKHPS EVR LVKQL+RKWK++VD+W + ++++ AS
Sbjct: 127 LADMDITYKALQETDIGRHVNGLRKHPSGEVRLLVKQLIRKWKEIVDDWVRLHNSSGDAS 186
Query: 543 PAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKK----- 707
+II++G+SP++I G+N Q+ +Q+ EF SP+ + ++E S+ A K
Sbjct: 187 NSIITDGNSPEKIQGKNQQS-SQVSEFKYSPSPSRHNNSSSERVSNGIASIAATKHRASP 245
Query: 708 -PAQNPARY--NGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQ 878
PA + AR N + SSA KEQ+D+ D E+L ARKRL ENY EAQNAKKQ
Sbjct: 246 APAHHNARQINNTHHSTTSSSAPARMVKEQKDSHLDLERLDSARKRLQENYQEAQNAKKQ 305
Query: 879 R 881
R
Sbjct: 306 R 306
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Cucumis sativus]
Length = 345
Score = 192 bits (489), Expect = 1e-46
Identities = 122/296 (41%), Positives = 172/296 (58%), Gaps = 3/296 (1%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
++RRDGIV+RLY+ GRS+ E + G+GE +P
Sbjct: 40 KNRRDGIVERLYALTSPPSRCRNCDTDRNHD---------GRSNGCEIKQGSGEVKEASP 90
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQN 362
S Y+ ++E++K+L IK+ L+ QPED+LV LLQN
Sbjct: 91 STPQF--------VVVEGDDDGADPYAGLFDDEQKKVLEIKEQLEIPQQPEDALVELLQN 142
Query: 363 LADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTAS 542
LADMDITF+ LKETDIGRHVN RKHPSN+VR+LVK LVRKWK++VDEW + N + +
Sbjct: 143 LADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEWVRLNQPGEQTA 202
Query: 543 PAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPAQN 719
++++GDSPQQ + QNG +Q+P+F SPN + G ++ +SEP E K K +
Sbjct: 203 -TLLADGDSPQQ---KAPQNGYHQVPDFAYSPNPHN-GGSGSDRNNSEP-EPKGKSVPRR 256
Query: 720 PARYNGSSTRPLSSAS--LAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQR 881
A + P SS + + ++Q++ + D++KLA ARKRL ENY EA+NAK+QR
Sbjct: 257 DALPKPTQQAPTSSLTPQNRQKEQQKEANFDSQKLASARKRLQENYKEAENAKRQR 312
>ref|NP_001065836.1| Os11g0166800 [Oryza sativa Japonica Group]
gi|113644540|dbj|BAF27681.1| Os11g0166800, partial
[Oryza sativa Japonica Group]
Length = 238
Score = 192 bits (489), Expect = 1e-46
Identities = 108/206 (52%), Positives = 142/206 (68%), Gaps = 8/206 (3%)
Frame = +3
Query: 288 KILAIKQFLDDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLV 467
KILAIK FL+D DQ ED L+SLLQ+LADMDIT+K L+ETDIGRHVN RKHPS EVR LV
Sbjct: 1 KILAIKDFLEDEDQSEDELLSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRLLV 60
Query: 468 KQLVRKWKDLVDEWAKSNSTNDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNA 647
KQL+RKWK++VD+W + ++++ AS +II++G+SP++I G+N Q+ +Q+ EF SP+ +
Sbjct: 61 KQLIRKWKEIVDDWVRLHNSSGDASNSIITDGNSPEKIQGKNQQS-SQVSEFKYSPSPSR 119
Query: 648 VGYLNTEGYSSEPIETKAKK------PAQNPARY--NGSSTRPLSSASLAKAKEQRDNSP 803
++E S+ A K PA + AR N + SSA KEQ+D+
Sbjct: 120 HNNSSSERVSNGIASIAATKHRASPAPAHHNARQINNTHHSTTSSSAPARMVKEQKDSHL 179
Query: 804 DAEKLAFARKRLHENYLEAQNAKKQR 881
D E+L ARKRL ENY EAQNAKKQR
Sbjct: 180 DLERLDSARKRLQENYQEAQNAKKQR 205
>ref|XP_006664368.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Oryza brachyantha]
Length = 278
Score = 192 bits (488), Expect = 1e-46
Identities = 108/209 (51%), Positives = 138/209 (66%), Gaps = 11/209 (5%)
Frame = +3
Query: 288 KILAIKQFLDDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLV 467
KILAI+ FL+D DQ ED LVSLLQ+LADMDIT+K L+ETDIGRHVN RKHPS EVRQLV
Sbjct: 41 KILAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLV 100
Query: 468 KQLVRKWKDLVDEWAKSNSTNDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNA 647
K LVRKWK++VD+W + +++ +++++GDSP +I GRN QN Q+ +F SP+
Sbjct: 101 KLLVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRNYQNA-QVSDFKYSPSPQR 159
Query: 648 VGYLNTEGYSS-----EPIETKAKKPAQNPARYNGSSTRPL------SSASLAKAKEQRD 794
L++E S+ IE + PA PA +N + SSA + +EQ+D
Sbjct: 160 HNGLSSERSSNNNGIESMIEKRRTSPA--PAYHNNKQNSSISYSTSSSSAPVRTMREQKD 217
Query: 795 NSPDAEKLAFARKRLHENYLEAQNAKKQR 881
D EKL ARKRL ENY EAQNAKKQR
Sbjct: 218 TLMDLEKLDSARKRLQENYQEAQNAKKQR 246
>ref|XP_006427873.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
gi|568820070|ref|XP_006464554.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Citrus sinensis] gi|557529863|gb|ESR41113.1|
hypothetical protein CICLE_v10025964mg [Citrus
clementina]
Length = 353
Score = 192 bits (488), Expect = 1e-46
Identities = 134/304 (44%), Positives = 180/304 (59%), Gaps = 11/304 (3%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
+ RRD IV+RLY+ V + +E +RG+ + A + SP+
Sbjct: 37 KERRDKIVERLYAT--CIASRCRNCDFGNGVVDVNKEISRGQHD----EVKAAQQASPS- 89
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQN 362
+P S+N Y ++E+++IL IK+ L+D DQ EDSL+ LLQ+
Sbjct: 90 TPHSVNGDDDIDIENDNDIIDP---YGGLFDDEQKRILEIKEHLEDPDQSEDSLIDLLQS 146
Query: 363 LADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTAS 542
LADMDITFK LKETDIGRHVN RKH SN+VR+LVK LVRKWKD+VDEW K N + AS
Sbjct: 147 LADMDITFKALKETDIGRHVNQLRKHSSNDVRKLVKHLVRKWKDIVDEWVKLNQPGELAS 206
Query: 543 PAIISNGDSPQQIHGRNSQNGN-QIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPAQN 719
A++ +GDSPQQ + QNGN Q+P+F SPN + G ++ +SEP E K+K+ A
Sbjct: 207 SAMM-DGDSPQQ---KIPQNGNHQVPDFAYSPNPHN-GSSGSDKNNSEP-ERKSKQ-APL 259
Query: 720 PARYNGSSTRPLSSASLA---------KAKEQRDNSPDAE-KLAFARKRLHENYLEAQNA 869
P R S+RP SAS A + KE R+++ DA+ +LA ARKRL ENY +NA
Sbjct: 260 P-RKEALSSRPPQSASPAAPHSVQRPREQKESRESTFDADSRLASARKRLQENYKREENA 318
Query: 870 KKQR 881
K+QR
Sbjct: 319 KRQR 322
>ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group]
gi|108862239|gb|ABA95889.2| transcription elongation
factor, putative, expressed [Oryza sativa Japonica
Group] gi|113648751|dbj|BAF29263.1| Os12g0165700 [Oryza
sativa Japonica Group] gi|125535897|gb|EAY82385.1|
hypothetical protein OsI_37597 [Oryza sativa Indica
Group]
Length = 340
Score = 192 bits (487), Expect = 2e-46
Identities = 107/209 (51%), Positives = 138/209 (66%), Gaps = 11/209 (5%)
Frame = +3
Query: 288 KILAIKQFLDDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLV 467
KILAI+ FL+D DQ ED LVSLLQ+LADMDIT+K L+ETDIGRHVN RKHPS EVRQLV
Sbjct: 103 KILAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLV 162
Query: 468 KQLVRKWKDLVDEWAKSNSTNDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNA 647
K LVRKWK++VD+W + +++ +++++GDSP +I GR+ QN Q+ +F SP+
Sbjct: 163 KLLVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNA-QVSDFKYSPSPQR 221
Query: 648 VGYLNTEGYSS-----EPIETKAKKPAQNPARYNGSSTRPL------SSASLAKAKEQRD 794
L++E S+ IE + PA P +N + SSA + +EQ+D
Sbjct: 222 HNGLSSERSSNNNGVESMIEKRRTSPA--PTYHNNKQNNSIGYSTTSSSAPVRTVREQKD 279
Query: 795 NSPDAEKLAFARKRLHENYLEAQNAKKQR 881
N D EKL ARKRL ENY EAQNAKKQR
Sbjct: 280 NLMDLEKLDSARKRLQENYQEAQNAKKQR 308
>gb|EAZ19760.1| hypothetical protein OsJ_35339 [Oryza sativa Japonica Group]
Length = 241
Score = 192 bits (487), Expect = 2e-46
Identities = 107/209 (51%), Positives = 138/209 (66%), Gaps = 11/209 (5%)
Frame = +3
Query: 288 KILAIKQFLDDTDQPEDSLVSLLQNLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLV 467
KILAI+ FL+D DQ ED LVSLLQ+LADMDIT+K L+ETDIGRHVN RKHPS EVRQLV
Sbjct: 4 KILAIRDFLEDPDQSEDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLV 63
Query: 468 KQLVRKWKDLVDEWAKSNSTNDTASPAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNA 647
K LVRKWK++VD+W + +++ +++++GDSP +I GR+ QN Q+ +F SP+
Sbjct: 64 KLLVRKWKEIVDDWVRLHNSGGDGGSSVLTDGDSPDKIQGRSYQNA-QVSDFKYSPSPQR 122
Query: 648 VGYLNTEGYSS-----EPIETKAKKPAQNPARYNGSSTRPL------SSASLAKAKEQRD 794
L++E S+ IE + PA P +N + SSA + +EQ+D
Sbjct: 123 HNGLSSERSSNNNGVESMIEKRRTSPA--PTYHNNKQNNSIGYSTTSSSAPVRTVREQKD 180
Query: 795 NSPDAEKLAFARKRLHENYLEAQNAKKQR 881
N D EKL ARKRL ENY EAQNAKKQR
Sbjct: 181 NLMDLEKLDSARKRLQENYQEAQNAKKQR 209
>gb|EOY19920.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 2, partial [Theobroma cacao]
Length = 300
Score = 191 bits (485), Expect = 3e-46
Identities = 121/291 (41%), Positives = 166/291 (57%), Gaps = 3/291 (1%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSP-T 179
+ RRDGIV+RLY+ + +E SP E + G G SP T
Sbjct: 37 KQRRDGIVERLYATSMVTRCKSCDFGERSNGYQVNKE-----GSPNEGKGGEGGRESPFT 91
Query: 180 PSPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQ 359
P D+ + Y ++E++++L IK+ L++ DQ EDSLV LLQ
Sbjct: 92 PQSDNEDGDLDP--------------YGGLFDDEQKRVLEIKESLEEPDQSEDSLVDLLQ 137
Query: 360 NLADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTA 539
+LADMDITF+ LKETDIGRHVN RKH SN+VR+LVKQLVRKWK++VDEW + N +
Sbjct: 138 SLADMDITFQALKETDIGRHVNKLRKHSSNDVRRLVKQLVRKWKEIVDEWVRVNQPGELE 197
Query: 540 SPAIISNGDSPQQIHGRNSQNG-NQIPEFGNSPNSNAVGYLNTEGYSSEPIETKAKKPAQ 716
S A++++GDSPQQ + QNG Q+P+F SPN + G E +SEP +KP
Sbjct: 198 SAALMADGDSPQQ---KLPQNGRQQVPDFAYSPNPHN-GSFGLEKNNSEP----ERKPKP 249
Query: 717 NPARYNGSSTRPL-SSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQN 866
P RP S+ + +EQ++++ D+E+LA ARKRL NY EA+N
Sbjct: 250 IPPPRKDPPPRPTHSTPPQNRQREQKESNFDSERLASARKRLQANYKEAEN 300
>ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cicer arietinum]
Length = 356
Score = 190 bits (482), Expect = 7e-46
Identities = 121/302 (40%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
+ RRDGIV+RLY+A + ++++ SP ++ G S P
Sbjct: 37 KRRRDGIVERLYAATTSPPLCQNCDGGNRQNINQIKKQSSPSLSPERQQHQRRGGASSPP 96
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQN 362
+P S+ N Y E+E++KIL IK+ L+D Q EDSL+ LLQN
Sbjct: 97 TPQSLGNDNDDDEELDP--------YGGLFEDEQKKILEIKELLEDPRQSEDSLLELLQN 148
Query: 363 LADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTAS 542
LAD+DITF+ LKETDIGR+VN RKHPSN+VR+LVK LV+KWK++VDEW + N +
Sbjct: 149 LADIDITFQELKETDIGRNVNQLRKHPSNDVRRLVKLLVKKWKEIVDEWVRLNPQG--GN 206
Query: 543 PAIISNGDSPQQIHGRNSQNG--NQIPEFGNSPN----SNAVGYLNTEGY---SSEPIET 695
++++GDSP Q + +QNG +QIP+F SPN S+ N+E +P+
Sbjct: 207 NTLMADGDSPLQ---KTNQNGHHHQIPDFAYSPNPHNGSSGSDRNNSEAEPKPKPKPVPR 263
Query: 696 KAKKPAQNPARYNGSSTRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKK 875
K P P+ + T L + + +EQ++++ DAE+LA ARKRL NY EA+NAKK
Sbjct: 264 KEPPPKLKPSPPVTAPTSTLQN----RQREQKESNFDAERLASARKRLQANYKEAENAKK 319
Query: 876 QR 881
QR
Sbjct: 320 QR 321
>ref|XP_004978772.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Setaria italica]
Length = 357
Score = 189 bits (481), Expect = 9e-46
Identities = 120/301 (39%), Positives = 168/301 (55%), Gaps = 8/301 (2%)
Frame = +3
Query: 3 RSRRDGIVQRLYSADXXXXXXXXXXXXXXXPVALKREEARGRSSPWEKRIGAGEGTSPTP 182
R+RRDGIV+RLY+A PV A G GE +P
Sbjct: 38 RARRDGIVERLYAA---AGCSSCDARQPAAPVPRAALAAAGLDEE------DGEEAAPV- 87
Query: 183 SPDSMNNAXXXXXXXXXXXXXAPRSYSHSIEEEKRKILAIKQFLDDTDQPEDSLVSLLQN 362
SP++ +A A +E KI+AI+ FL+D DQPED LVSLLQN
Sbjct: 88 SPEAEGDAAGAGAAEEAEELGAGAGGEPGLES---KIVAIRDFLEDPDQPEDELVSLLQN 144
Query: 363 LADMDITFKTLKETDIGRHVNNHRKHPSNEVRQLVKQLVRKWKDLVDEWAKSNSTNDTAS 542
L DMD+T+K L+ETDIGRHVN RKHPS EVR+LVKQL+RKWK++VD+W + +++
Sbjct: 145 LEDMDVTYKALQETDIGRHVNGLRKHPSAEVRRLVKQLIRKWKEIVDDWVRLHNSGGDGG 204
Query: 543 PAIISNGDSPQQIHGRNSQNGNQIPEFGNSPNSNAVGYLNTEGYSS--EPIETKAKKPAQ 716
+II++GDSP++I GR+ Q+ ++ F SP+ +E ++ EP ++ +
Sbjct: 205 SSIIADGDSPEKIQGRSHQS-PRVSGFQYSPSPQRHNGSTSERANNGFEPTMDMKRRASP 263
Query: 717 NPARYNGSS------TRPLSSASLAKAKEQRDNSPDAEKLAFARKRLHENYLEAQNAKKQ 878
PA +N + P+ SA ++ +D+ D ++L ARKRL ENY EAQNAKKQ
Sbjct: 264 VPAHHNSRQMNNNHHSTPMPSAPAKVTRDHKDSLLDLDRLDSARKRLQENYQEAQNAKKQ 323
Query: 879 R 881
R
Sbjct: 324 R 324