BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00009985
         (2673 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containi...   998   0.0  
ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   997   0.0  
gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis]     987   0.0  
ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citr...   986   0.0  
gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily p...   984   0.0  
gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus pe...   974   0.0  
ref|XP_002299387.2| pentatricopeptide repeat-containing family p...   963   0.0  
ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutr...   961   0.0  
ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containi...   957   0.0  
ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containi...   953   0.0  
ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Caps...   953   0.0  
ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containi...   950   0.0  
gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus...   946   0.0  
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...   946   0.0  
ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containi...   945   0.0  
ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containi...   943   0.0  
ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Ara...   942   0.0  
gb|AAP40452.1| unknown protein [Arabidopsis thaliana]                 942   0.0  
emb|CAB66100.1| putative protein [Arabidopsis thaliana]               918   0.0  
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t...   891   0.0  

>ref|XP_006468579.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Citrus sinensis]
          Length = 882

 Score =  998 bits (2579), Expect = 0.0
 Identities = 502/843 (59%), Positives = 627/843 (74%), Gaps = 12/843 (1%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            +W+E+LRS  R+N F  A+ +Y++MT + + PD+                S+G+Q+HA  
Sbjct: 44   SWIESLRSQTRSNQFREAILSYIEMTRSDIQPDNFAFPSVLKAVAGIQDLSLGKQIHAHV 103

Query: 283  VKRGYHTSPVTVANTLVNMYARCG-DLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXX 459
            VK GY  S VTVANTLVNMY +CG D+    KVFDRI E+D+VSWNS I           
Sbjct: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFGKWDL 163

Query: 460  XXXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFA 639
                FR +                   CSNL +  G+RLG+Q+HG +LR   + +   F 
Sbjct: 164  ALEAFRMMLYSNVEPSSFTLVSVALA-CSNLSRRDGLRLGRQVHGNSLRVGEWNT---FI 219

Query: 640  FNALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGI 819
             NAL+AMYAKLGRVDDA  LF+ F+DRD+V+WNT++SSL+QND+F EA+  L +M L GI
Sbjct: 220  MNALMAMYAKLGRVDDAKTLFKSFEDRDLVSWNTIVSSLSQNDKFLEAVMFLRQMALRGI 279

Query: 820  KPDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERAR 999
            KPDGV+++S LP+CS +EML+ GKEIHAYA RN  L  N+FV SALVDMYCN   VE  R
Sbjct: 280  KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339

Query: 1000 AVFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDME-TAGLVPNETTLASILPACVRS 1176
             VFD I ++++ LWNAMI+GY QN  D+EAL LFI ME  AGL PN TT++S++PACVRS
Sbjct: 340  RVFDFISDKKIALWNAMITGYGQNEYDEEALMLFIKMEEVAGLWPNATTMSSVVPACVRS 399

Query: 1177 EAFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLI 1356
            EAFP+KE IH + IK G+  D++VQNALMDMYSR+G+I+IS+ IF  ME RD VSWNT+I
Sbjct: 400  EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459

Query: 1357 TGCIICGCYSQAFRLVNQMQ-----KNGNFIEGIDKESLHYKPNYITLMTLLPACGSLAA 1521
            TG  ICG +  A  L+ +MQ     KN N +  +D+  L  KPN ITLMT+LP CG+L+A
Sbjct: 460  TGYTICGQHGDALMLLREMQNMEEDKNRNNVYDLDETVLRPKPNSITLMTVLPGCGALSA 519

Query: 1522 LGKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMA 1701
            L KG+EIH YAIR  L +D+ VGSALVDMYAKCG LNFAR VFD MP RNV+TWNV+IMA
Sbjct: 520  LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVITWNVIIMA 579

Query: 1702 YGMHGQGEEAIGLFELMIAKG----EAKPSSVTIIAALAACSHSGMVSRGMKLFHTIKE- 1866
            YGMHG+G+E + L + M+A+G    E KP+ VT IA  AACSHSGMVS GM LF+ +K+ 
Sbjct: 580  YGMHGEGQEVLELLKNMVAEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639

Query: 1867 CGVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGE 2046
             G+E + DHYACVVDLLGRAG++++AYQLI  M  E DKAGAWSSLLGACRIH N E+GE
Sbjct: 640  YGIEPSPDHYACVVDLLGRAGKVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699

Query: 2047 VAAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDV 2226
            +AA++LF LEP+ +SHYVLLSNIY++   +DKAM+VRK MK  GVRKE GCSWIE GD++
Sbjct: 700  IAAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759

Query: 2227 HRFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLA 2406
            H+F AGD SH+QS +++ +LE+L +RM+KEGYVPD SCVLH+V E EKE LLCGHSEKLA
Sbjct: 760  HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819

Query: 2407 ISFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCG 2586
            I+FGILNTPPG+TIRVAKNLRVCNDCH+++KFISK+  R+IILRD RRFHHFK+G+CSCG
Sbjct: 820  IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879

Query: 2587 DYW 2595
            DYW
Sbjct: 880  DYW 882


>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  997 bits (2578), Expect = 0.0
 Identities = 505/842 (59%), Positives = 626/842 (74%), Gaps = 11/842 (1%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            +W++ LRS  R+N F  A++TY++MT +G  PD+                  G Q+HAA+
Sbjct: 59   SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118

Query: 283  VKRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXX 462
            VK GY +S VTVANTLVNMY +CG +    KVFDRI +RD+VSWNS I            
Sbjct: 119  VKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQA 178

Query: 463  XXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAF 642
               FR++Q E                CSNL    G+RLGKQLHGY+LR       K F  
Sbjct: 179  LEAFRAMQMENMELSSFTLVSVALA-CSNLGVMHGLRLGKQLHGYSLR---VGDQKTFTN 234

Query: 643  NALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIK 822
            NAL+AMYAKLGRVDD+ ALFE F DRD+V+WNTMISS +Q+DRFSEA+A    MVL G++
Sbjct: 235  NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVE 294

Query: 823  PDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARA 1002
             DGVT++S LP+CS +E L+ GKEIHAY  RN+ L  N+FV SALVDMYCN   VE  R 
Sbjct: 295  LDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRR 354

Query: 1003 VFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDM-ETAGLVPNETTLASILPACVRSE 1179
            VFD I  RR+ LWNAMISGYA+N LD++AL LFI+M + AGL+PN TT+AS++PACV  E
Sbjct: 355  VFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCE 414

Query: 1180 AFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLIT 1359
            AF NKE IH Y +K G + D++VQNALMDMYSR+GK+DIS+ IF +ME RD VSWNT+IT
Sbjct: 415  AFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMIT 474

Query: 1360 GCIICGCYSQAFRLVNQMQKNGNFIE-----GIDKESLHYKPNYITLMTLLPACGSLAAL 1524
            G ++ G YS A  L+++MQ+  N  +       D++   YKPN ITLMT+LP C +LAA+
Sbjct: 475  GYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAI 534

Query: 1525 GKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAY 1704
             KG+EIH YAIR  L SDI VGSALVDMYAKCG LN +R VF+ MP +NV+TWNVLIMA 
Sbjct: 535  AKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMAC 594

Query: 1705 GMHGQGEEAIGLFELMIAK----GEAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK-EC 1869
            GMHG+GEEA+ LF+ M+A+    GEAKP+ VT I   AACSHSG++S G+ LF+ +K + 
Sbjct: 595  GMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDH 654

Query: 1870 GVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEV 2049
            GVE  +DHYACVVDLLGRAG+L+EAY+L+ +M  E DK GAWSSLLGACRIH N ELGEV
Sbjct: 655  GVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEV 714

Query: 2050 AAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVH 2229
            AAK+L  LEP  +SHYVLLSNIY++ G ++KAMEVRKNM+  GV+KE GCSWIE  D+VH
Sbjct: 715  AAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVH 774

Query: 2230 RFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAI 2409
            +F AGD SH QS +++ +LE+L ++M+KEGYVPD SCVLH+V+E EKE LLCGHSEKLAI
Sbjct: 775  KFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAI 834

Query: 2410 SFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGD 2589
            +FGILNTPPG+TIRVAKNLRVCNDCH ++KFISK++ R+II+RD RRFHHFK+G+CSCGD
Sbjct: 835  AFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGD 894

Query: 2590 YW 2595
            YW
Sbjct: 895  YW 896



 Score =  196 bits (499), Expect = 3e-47
 Identities = 128/434 (29%), Positives = 216/434 (49%), Gaps = 4/434 (0%)
 Frame = +1

Query: 718  RDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKPDGVTLSSALPSCSFMEMLNAGKEI 897
            R   +W   + S T+++ F EAI+   EM ++G +PD     + L + S ++ L  G++I
Sbjct: 55   RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 898  HAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAVFDKIPERRLGLWNAMISGYAQNML 1077
            HA A +      +  VA+ LV+MY   G +     VFD+I +R    WN+ I+   +   
Sbjct: 115  HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174

Query: 1078 DDEALKLFIDMETAGLVPNETTLASILPACVR---SEAFPNKEDIHSYVIKRGMEGDKFV 1248
             ++AL+ F  M+   +  +  TL S+  AC            + +H Y ++ G +   F 
Sbjct: 175  WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFT 233

Query: 1249 QNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITGCIICGCYSQAFRLVNQMQKNGN 1428
             NALM MY+++G++D S+ +F +  DRD+VSWNT+I+       +S+A      M   G 
Sbjct: 234  NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV 293

Query: 1429 FIEGIDKESLHYKPNYITLMTLLPACGSLAALGKGQEIHGYAIRQG-LDSDIAVGSALVD 1605
             ++G            +T+ ++LPAC  L  L  G+EIH Y +R   L  +  VGSALVD
Sbjct: 294  ELDG------------VTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVD 341

Query: 1606 MYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQGEEAIGLFELMIAKGEAKPSSV 1785
            MY  C  +   R VFD +  R +  WN +I  Y  +G  E+A+ LF  MI      P++ 
Sbjct: 342  MYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTT 401

Query: 1786 TIIAALAACSHSGMVSRGMKLFHTIKECGVEANADHYACVVDLLGRAGELDEAYQLIVSM 1965
            T+ + + AC H    S    +     + G + +      ++D+  R G++D +  +  SM
Sbjct: 402  TMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSM 461

Query: 1966 DNELDKAGAWSSLL 2007
              E+    +W++++
Sbjct: 462  --EVRDRVSWNTMI 473


>gb|EXB83263.1| hypothetical protein L484_011557 [Morus notabilis]
          Length = 877

 Score =  987 bits (2551), Expect = 0.0
 Identities = 494/839 (58%), Positives = 619/839 (73%), Gaps = 8/839 (0%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            +W+E+LRS  R N F  A++TY  MT A +PPD+                S+GRQ+HA  
Sbjct: 43   SWIESLRSQVRNNLFRDAVSTYTSMTMA-IPPDNFAFPPILKAATSLRDLSLGRQIHAHV 101

Query: 283  VKRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXX 462
             K GY +S VTVANTLVNMY +CGD+  A KVFDRIP+RD+VSWNS I            
Sbjct: 102  FKFGYASSSVTVANTLVNMYGKCGDIGDAHKVFDRIPQRDQVSWNSMIAALCHFGEWALA 161

Query: 463  XXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAF 642
               FR++  EE               CSNL++  G+ LGKQ+HGY+LR       K F  
Sbjct: 162  LEAFRAMLAEENVDPSSFTLVSVSLACSNLERFYGLWLGKQVHGYSLRKDD---RKTFTI 218

Query: 643  NALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIK 822
            NAL+AMYAKLGRVDD+VALFE F++RD+V+WNT+ISSL+QND F EA+A+L  MV  G+ 
Sbjct: 219  NALMAMYAKLGRVDDSVALFELFENRDLVSWNTVISSLSQNDMFVEALALLRRMVREGVG 278

Query: 823  PDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARA 1002
             DGVT++S LP+CS +EML+ GKEIHAYA RN  L  N+FV SALVDMYCN   V+  R 
Sbjct: 279  LDGVTIASVLPACSHLEMLDLGKEIHAYAVRNDDLIENSFVGSALVDMYCNCRRVKTGRR 338

Query: 1003 VFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDM-ETAGLVPNETTLASILPACVRSE 1179
            VFD I ER+  LWNAMI+GYAQN  D+EAL LF++M    GL PN TT+ASI+PAC R +
Sbjct: 339  VFDSILERKTALWNAMIAGYAQNEFDEEALNLFLEMLAVLGLSPNATTMASIVPACARCK 398

Query: 1180 AFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLIT 1359
            A  +KE IH YV+K G+EGD++VQNALMD YSR+GKI+IS+ IF  ME++D+VSWNT+IT
Sbjct: 399  ALCDKESIHGYVVKMGLEGDRYVQNALMDFYSRIGKIEISRSIFKTMEEKDIVSWNTMIT 458

Query: 1360 GCIICGCYSQAFRLVNQMQKNGNFIEGIDKESLH--YKPNYITLMTLLPACGSLAALGKG 1533
            G +ICG +++A  ++++M K       +  E+     K N +TLMT+LP C +L+ L KG
Sbjct: 459  GYVICGFHNEALCMLHEMTKEKISDAELKSETGRNMLKLNSVTLMTILPGCAALSVLAKG 518

Query: 1534 QEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMH 1713
            +EIH YAIR  L SD+AVGSALVDMYAKCG  + AR VF+ MP RNV+TWNVLIMAYGMH
Sbjct: 519  REIHAYAIRHLLASDVAVGSALVDMYAKCGCSDIARAVFEEMPMRNVITWNVLIMAYGMH 578

Query: 1714 GQGEEAIGLFELMIAKG----EAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK-ECGVE 1878
            G+G EA+ LFE M+ +G    EA+P+ VT IA  AACSHS MV+ G+ LFH +K + GVE
Sbjct: 579  GRGREALELFENMVKEGMRNKEARPTEVTFIAVFAACSHSKMVTEGLDLFHRMKKDYGVE 638

Query: 1879 ANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEVAAK 2058
              ADHYAC+VDLLGRAG+++EAYQLI +M  + DK GAWSSLLG CR+H + E+GE+AA+
Sbjct: 639  PLADHYACIVDLLGRAGKVEEAYQLINTMPLDFDKTGAWSSLLGTCRVHHSVEIGEIAAE 698

Query: 2059 HLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVHRFT 2238
            +L ++EP  +SHYVLLSNIY++ G +D+AM+VR+ MK  GVRKE GCSWIE GD+VH+F 
Sbjct: 699  NLLQVEPNVASHYVLLSNIYSSAGLWDEAMDVRRRMKEMGVRKEPGCSWIEFGDEVHKFL 758

Query: 2239 AGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAISFG 2418
            AGD SH QS +++ +LE+L  RMKK GYVPD SCVLHDV+E  KE LLCGHSEKLAI+FG
Sbjct: 759  AGDGSHPQSEKLHEFLENLAMRMKKAGYVPDTSCVLHDVDEEAKETLLCGHSEKLAIAFG 818

Query: 2419 ILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGDYW 2595
            ILNTPPG+TIRVAKNLRVCNDCH ++K ISK++ R+IILRD RRFHHFK G+CSCGDYW
Sbjct: 819  ILNTPPGTTIRVAKNLRVCNDCHAAAKVISKIMDREIILRDVRRFHHFKSGTCSCGDYW 877


>ref|XP_006448595.1| hypothetical protein CICLE_v10014221mg [Citrus clementina]
            gi|557551206|gb|ESR61835.1| hypothetical protein
            CICLE_v10014221mg [Citrus clementina]
          Length = 882

 Score =  986 bits (2550), Expect = 0.0
 Identities = 498/843 (59%), Positives = 621/843 (73%), Gaps = 12/843 (1%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            +W+E+LRS  R+N F  A+ +Y++MT + + PD+                S+G+Q+HA  
Sbjct: 44   SWIESLRSQTRSNQFREAILSYIEMTRSDIQPDNFAFPAVLKAVAGIQDLSLGKQIHAHV 103

Query: 283  VKRGYHTSPVTVANTLVNMYARCG-DLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXX 459
            VK GY  S VTVANTLVNMY +CG D+    KVFDRI E+D+VSWNS I           
Sbjct: 104  VKYGYGLSSVTVANTLVNMYGKCGSDMWDVYKVFDRITEKDQVSWNSMIATLCRFEKWDL 163

Query: 460  XXXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFA 639
                FR +                   CSNL +  G+RLG+Q+HG +LR   + +   F 
Sbjct: 164  ALEAFRMMLYSNVEPSSFTLVSVALA-CSNLSRRDGLRLGRQVHGNSLRVGEWNT---FI 219

Query: 640  FNALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGI 819
             NAL+AMYAKLGRVDDA  LF+ F+D D+V+WNT+ISS +QND+F EA+  L +M L GI
Sbjct: 220  MNALMAMYAKLGRVDDAKTLFKSFEDCDLVSWNTIISSSSQNDKFLEAVMFLRQMALRGI 279

Query: 820  KPDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERAR 999
            KPDGV+++S LP+CS +EML+ GKEIHAYA RN  L  N+FV SALVDMYCN   VE  R
Sbjct: 280  KPDGVSIASVLPACSHLEMLDTGKEIHAYALRNDILIDNSFVGSALVDMYCNCREVECGR 339

Query: 1000 AVFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDME-TAGLVPNETTLASILPACVRS 1176
             VFD I ++++ LWNAMI+GYAQN  D+EAL LFI ME  AGL PN TTL+S++P CVRS
Sbjct: 340  RVFDFISDKKIALWNAMITGYAQNEYDEEALMLFIKMEEVAGLWPNATTLSSVVPVCVRS 399

Query: 1177 EAFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLI 1356
            EAFP+KE IH + IK G+  D++VQNALMDMYSR+G+I+IS+ IF  ME RD VSWNT+I
Sbjct: 400  EAFPDKEGIHGHAIKLGLGRDRYVQNALMDMYSRMGRIEISKTIFDDMEVRDTVSWNTMI 459

Query: 1357 TGCIICGCYSQAFRLVNQMQ-----KNGNFIEGIDKESLHYKPNYITLMTLLPACGSLAA 1521
            TG  IC  +  A  L+ +MQ     KN N +  +D+  L  KPN ITLMT+LP CG+L+A
Sbjct: 460  TGYTICSQHGDALMLLREMQNMEEEKNRNNVYDLDERVLRPKPNSITLMTVLPGCGALSA 519

Query: 1522 LGKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMA 1701
            L KG+EIH YAIR  L +D+ VGSALVDMYAKCG LNFAR VFD MP RNV++WNV+IMA
Sbjct: 520  LAKGKEIHAYAIRNMLATDVVVGSALVDMYAKCGCLNFARRVFDLMPVRNVISWNVIIMA 579

Query: 1702 YGMHGQGEEAIGLFELMIAKG----EAKPSSVTIIAALAACSHSGMVSRGMKLFHTIKE- 1866
            YGMHG+G E + L + M+ +G    E KP+ VT IA  AACSHSGMVS GM LF+ +K+ 
Sbjct: 580  YGMHGEGREVLELLKNMVTEGSRGGEVKPNEVTFIALFAACSHSGMVSEGMDLFYKMKDD 639

Query: 1867 CGVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGE 2046
             G+E + DHYACVVDLLGRAG++++AYQLI  M  E DKAGAWSSLLGACRIH N E+GE
Sbjct: 640  YGIEPSPDHYACVVDLLGRAGQVEDAYQLINMMPPEFDKAGAWSSLLGACRIHQNVEIGE 699

Query: 2047 VAAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDV 2226
            + A++LF LEP+ +SHYVLLSNIY++   +DKAM+VRK MK  GVRKE GCSWIE GD++
Sbjct: 700  IGAQNLFLLEPDVASHYVLLSNIYSSAQLWDKAMDVRKKMKEMGVRKEPGCSWIEFGDEI 759

Query: 2227 HRFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLA 2406
            H+F AGD SH+QS +++ +LE+L +RM+KEGYVPD SCVLH+V E EKE LLCGHSEKLA
Sbjct: 760  HKFLAGDGSHQQSEQLHGFLENLSERMRKEGYVPDTSCVLHNVNEEEKETLLCGHSEKLA 819

Query: 2407 ISFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCG 2586
            I+FGILNTPPG+TIRVAKNLRVCNDCH+++KFISK+  R+IILRD RRFHHFK+G+CSCG
Sbjct: 820  IAFGILNTPPGTTIRVAKNLRVCNDCHQATKFISKIESREIILRDVRRFHHFKNGTCSCG 879

Query: 2587 DYW 2595
            DYW
Sbjct: 880  DYW 882


>gb|EOX96826.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao]
          Length = 955

 Score =  984 bits (2543), Expect = 0.0
 Identities = 487/844 (57%), Positives = 626/844 (74%), Gaps = 13/844 (1%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            +W E+LRS+ R+N FH A+ TYV M+S+G+PPDH                ++G+Q+HA  
Sbjct: 118  SWTESLRSNTRSNRFHQAILTYVSMSSSGIPPDHFAFPAVLKAVTALHDLALGKQIHAQV 177

Query: 283  VKRGYH--TSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXX 456
            +K GY   TS VTVANTLVN Y +CGD+    KVFDRI +RD VSWNS I          
Sbjct: 178  LKFGYGFGTSSVTVANTLVNFYGKCGDIWDVYKVFDRIHQRDTVSWNSFISAFCRLEDWE 237

Query: 457  XXXXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRF 636
                 FR +   +               CSNL    G+ LGKQLH Y+LR       K F
Sbjct: 238  AALEAFR-LMLLDNVEPSSFTLVSIAHACSNLPSRDGLHLGKQLHAYSLR---IGDAKTF 293

Query: 637  AFNALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAG 816
             +NAL+ MY+KLG ++DA  LFE F +RD+++WNTM+SSL+QND+F+EA+ +LH MVL G
Sbjct: 294  TYNALMTMYSKLGHLNDAKLLFELFKERDLISWNTMLSSLSQNDKFTEALLLLHRMVLEG 353

Query: 817  IKPDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERA 996
            +KPDGVT++S LP+CS +E+L+ GK++HAYA R+  L  N+FV SALVDMYCN    +  
Sbjct: 354  LKPDGVTIASVLPACSHLELLDIGKQLHAYALRHDILIDNSFVGSALVDMYCNCRKAQSG 413

Query: 997  RAVFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDMET-AGLVPNETTLASILPACVR 1173
            R VFD + +++ GLWNAMI+GY+QN  D++AL LFI+ME  AGL PN TT+ASI+PACVR
Sbjct: 414  RQVFDCVIDKKTGLWNAMITGYSQNEHDEDALILFIEMEAVAGLCPNATTMASIVPACVR 473

Query: 1174 SEAFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTL 1353
            SEAF +K+ IH YV+KRG+  D +VQNALMDMY R+GKI IS+ IF  ME RD+VSWNT+
Sbjct: 474  SEAFVHKQGIHGYVVKRGLASDPYVQNALMDMYCRMGKIQISKTIFDNMEVRDIVSWNTM 533

Query: 1354 ITGCIICGCYSQAFRLVNQMQ-----KNGNFIEGIDKESLHYKPNYITLMTLLPACGSLA 1518
            ITG +ICG +  A  L+++MQ     K+ ++ E  D++ +  KPN ITLMT+LP C +L+
Sbjct: 534  ITGYVICGHHDNALLLLHEMQRVEQEKSADYYE--DEKRIPLKPNSITLMTVLPGCATLS 591

Query: 1519 ALGKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIM 1698
            AL KG+EIH YAIR  L SD+ VGSALVDMYAKCG LNF R VFD +P RNV+TWNV+IM
Sbjct: 592  ALSKGKEIHAYAIRNMLASDVGVGSALVDMYAKCGCLNFCRKVFDIIPLRNVITWNVIIM 651

Query: 1699 AYGMHGQGEEAIGLFELMIAKG----EAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK- 1863
            AYGMHG+G EA+ LF  M+A+     E KP+ VT IA  AACSHSGMV  G+ LF+ +K 
Sbjct: 652  AYGMHGKGAEALELFNCMVAEASKVKEVKPNEVTFIAIFAACSHSGMVREGLNLFYRMKD 711

Query: 1864 ECGVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELG 2043
            E G+E   DHYAC+VDLLGRAG+++E+YQLI +M ++ DKAGAWSSLLG+CRIH N E+G
Sbjct: 712  EYGIEPTPDHYACIVDLLGRAGQVEESYQLINTMPSQFDKAGAWSSLLGSCRIHQNVEIG 771

Query: 2044 EVAAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDD 2223
            E+AA++LF LEP+ +SHYVLLSNIY++   +DKA +VRK MK  GVRKE GCSWIE GD+
Sbjct: 772  EIAARNLFYLEPDVASHYVLLSNIYSSAQLWDKANDVRKKMKEMGVRKEPGCSWIEFGDE 831

Query: 2224 VHRFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKL 2403
            VH+F AGD+SH QS +++ +LE+L ++M+KEGYVPD SCVLH+V+E EKE LLCGHSEKL
Sbjct: 832  VHKFLAGDASHAQSGQLHKFLETLSEKMRKEGYVPDTSCVLHNVDEEEKETLLCGHSEKL 891

Query: 2404 AISFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSC 2583
            AI++G+LN PPG+TIRVAKNLRVCNDCHE++K+IS++  R+IILRD RRFHHF++G CSC
Sbjct: 892  AIAYGLLNYPPGTTIRVAKNLRVCNDCHEATKYISRITDREIILRDVRRFHHFRNGRCSC 951

Query: 2584 GDYW 2595
            GDYW
Sbjct: 952  GDYW 955


>gb|EMJ25188.1| hypothetical protein PRUPE_ppa014757mg [Prunus persica]
          Length = 901

 Score =  974 bits (2517), Expect = 0.0
 Identities = 493/842 (58%), Positives = 618/842 (73%), Gaps = 11/842 (1%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            +W+ETLRS  R+N F  A+ TY++MT +G+ PD+                ++G+Q+HA  
Sbjct: 64   SWIETLRSQTRSNHFREAILTYIEMTLSGIVPDNFAFPAVLKAVTSLQDLNLGKQIHAHI 123

Query: 283  VKRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXX 462
            VK GY +S VTVANTLVN+Y +CGD+  A KVFD I ERD+VSWNS I            
Sbjct: 124  VKFGYGSSSVTVANTLVNVYGKCGDIGDACKVFDGIIERDQVSWNSMIAALCRFEEWELA 183

Query: 463  XXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAF 642
               FRS+  E                CSNL +  G+RLGKQ+H Y++R       K F  
Sbjct: 184  LEAFRSMLMENMEPSSFTLVSVALA-CSNLHKRDGLRLGKQVHAYSVRMSEC---KTFTI 239

Query: 643  NALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIK 822
            NALLAMY+KLG  + + ALFE ++D D+V+WNTMISSL+QND+F EA+     MVLAG K
Sbjct: 240  NALLAMYSKLGEAEYSRALFELYEDCDMVSWNTMISSLSQNDQFMEALEFFRLMVLAGFK 299

Query: 823  PDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARA 1002
            PDGVT++S LP+CS +EML+ GKEIHAYA R + L  N++V SALVDMYCN   V     
Sbjct: 300  PDGVTVASVLPACSHLEMLDTGKEIHAYALRTNELIENSYVGSALVDMYCNCRQVSSGCR 359

Query: 1003 VFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDMETA-GLVPNETTLASILPACVRSE 1179
            VF+ + ER++ LWNAMI+GYAQN  + EAL LF++M  A GL PN TT++SI+PA VR E
Sbjct: 360  VFNAVLERKIALWNAMITGYAQNEYNKEALNLFLEMCAASGLSPNSTTMSSIVPASVRCE 419

Query: 1180 AFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLIT 1359
            AF +KE IH YVIKRG+E +++VQNALMDMYSR+GK  IS+ IF +ME RD+VSWNT+IT
Sbjct: 420  AFSDKESIHGYVIKRGLEKNRYVQNALMDMYSRMGKTQISETIFNSMEVRDIVSWNTMIT 479

Query: 1360 GCIICGCYSQAFRLVNQMQ-----KNGNFIEGIDKESLHYKPNYITLMTLLPACGSLAAL 1524
            G +ICG +  A  L+  MQ     KN N     D+  +  KPN IT MT+LP C +LAAL
Sbjct: 480  GYVICGRHGDALNLIYDMQRVKEKKNMNDNAYDDEGRVPLKPNSITFMTILPGCAALAAL 539

Query: 1525 GKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAY 1704
             KG+EIH YAI+  L  D+AVGSALVDMYAKCG ++ AR VF+++P +NV+TWNVLIMAY
Sbjct: 540  AKGKEIHSYAIKHLLAFDVAVGSALVDMYAKCGCIDLARAVFNQIPIKNVITWNVLIMAY 599

Query: 1705 GMHGQGEEAIGLFELMIAKG----EAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK-EC 1869
            GMHG+GEEA+ LF+ M+ +G    E +P+ VT IA  AACSHSGMV  G+ LFH +K + 
Sbjct: 600  GMHGRGEEALELFKNMVDEGCRNKEVRPNEVTFIALFAACSHSGMVDEGLNLFHKMKSDH 659

Query: 1870 GVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEV 2049
            GVE   DHYACVVDLLGRAG ++EAYQL+ +M +ELDKAGAWSSLLGACRIH N E+GE+
Sbjct: 660  GVEPATDHYACVVDLLGRAGNVEEAYQLVNTMPSELDKAGAWSSLLGACRIHQNVEIGEI 719

Query: 2050 AAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVH 2229
            AA  L ELEP  +SHYVLLSNIY++ G +DKAM+VR+ MK  GV+KE GCSWIE GD+VH
Sbjct: 720  AANQLLELEPSVASHYVLLSNIYSSSGLWDKAMDVRRKMKEMGVKKEPGCSWIEFGDEVH 779

Query: 2230 RFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAI 2409
            +F AGD SH QS +++ +LE+L ++MKKEGYVPD SCVLH+V+E EKE LLCGHSEKLA+
Sbjct: 780  KFLAGDLSHPQSEQLHEFLETLSEKMKKEGYVPDTSCVLHNVDEEEKETLLCGHSEKLAL 839

Query: 2410 SFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGD 2589
            +FGILNT PG+TIRVAKNLRVCNDCH +SK+ISK++ R+IILRD RRFHHFK+G+CSCGD
Sbjct: 840  AFGILNTRPGTTIRVAKNLRVCNDCHMASKYISKILDREIILRDVRRFHHFKNGTCSCGD 899

Query: 2590 YW 2595
            YW
Sbjct: 900  YW 901



 Score =  191 bits (485), Expect = 1e-45
 Identities = 132/438 (30%), Positives = 219/438 (50%), Gaps = 8/438 (1%)
 Frame = +1

Query: 718  RDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKPDGVTLSSALPSCSFMEMLNAGKEI 897
            R   +W   + S T+++ F EAI    EM L+GI PD     + L + + ++ LN GK+I
Sbjct: 60   RTPASWIETLRSQTRSNHFREAILTYIEMTLSGIVPDNFAFPAVLKAVTSLQDLNLGKQI 119

Query: 898  HAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAVFDKIPERRLGLWNAMISGYAQNML 1077
            HA+  +      +  VA+ LV++Y   G +  A  VFD I ER    WN+MI+   +   
Sbjct: 120  HAHIVKFGYGSSSVTVANTLVNVYGKCGDIGDACKVFDGIIERDQVSWNSMIAALCRFEE 179

Query: 1078 DDEALKLFIDMETAGLVPNETTLASILPACV---RSEAFPNKEDIHSYVIKRGMEGDKFV 1248
             + AL+ F  M    + P+  TL S+  AC    + +     + +H+Y + R  E   F 
Sbjct: 180  WELALEAFRSMLMENMEPSSFTLVSVALACSNLHKRDGLRLGKQVHAYSV-RMSECKTFT 238

Query: 1249 QNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITGCIICGCYSQAFRLVNQMQKNGN 1428
             NAL+ MYS++G+ + S+ +F   ED D+VSWNT+I                + + +N  
Sbjct: 239  INALLAMYSKLGEAEYSRALFELYEDCDMVSWNTMI----------------SSLSQNDQ 282

Query: 1429 FIEGIDKESL----HYKPNYITLMTLLPACGSLAALGKGQEIHGYAIRQG-LDSDIAVGS 1593
            F+E ++   L     +KP+ +T+ ++LPAC  L  L  G+EIH YA+R   L  +  VGS
Sbjct: 283  FMEALEFFRLMVLAGFKPDGVTVASVLPACSHLEMLDTGKEIHAYALRTNELIENSYVGS 342

Query: 1594 ALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQGEEAIGLFELMIAKGEAK 1773
            ALVDMY  C  ++    VF+ + +R +  WN +I  Y  +   +EA+ LF  M A     
Sbjct: 343  ALVDMYCNCRQVSSGCRVFNAVLERKIALWNAMITGYAQNEYNKEALNLFLEMCAASGLS 402

Query: 1774 PSSVTIIAALAACSHSGMVSRGMKLFHTIKECGVEANADHYACVVDLLGRAGELDEAYQL 1953
            P+S T+ + + A       S    +   + + G+E N      ++D+  R G+   +  +
Sbjct: 403  PNSTTMSSIVPASVRCEAFSDKESIHGYVIKRGLEKNRYVQNALMDMYSRMGKTQISETI 462

Query: 1954 IVSMDNELDKAGAWSSLL 2007
              SM  E+    +W++++
Sbjct: 463  FNSM--EVRDIVSWNTMI 478


>ref|XP_002299387.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550347073|gb|EEE84192.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 894

 Score =  963 bits (2489), Expect = 0.0
 Identities = 483/845 (57%), Positives = 621/845 (73%), Gaps = 14/845 (1%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            +W+E+LRS +R+N F  A++TY++M  +GV PD+                 +G+Q+HA  
Sbjct: 57   SWIESLRSRSRSNLFREAISTYIEMIGSGVSPDNFAFPAVLKAVAGIQELYLGKQIHAHV 116

Query: 283  VKRGYHT-SPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXX 459
             K GY + S VT+ NTLVNMY +CG L  A KVFDRI ERD+VSWNS I           
Sbjct: 117  FKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEV 176

Query: 460  XXXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFA 639
                FR +   E               CSNL +  G+ LGKQ+HG   R   +   + F+
Sbjct: 177  AIKAFR-LMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHW---RTFS 232

Query: 640  FNALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGI 819
             NAL+AMYAKLGR+DDA +L   F+DRD+VTWN+MISS +QN+RF EA+  L  MVL G+
Sbjct: 233  NNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGV 292

Query: 820  KPDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERAR 999
            KPDGVT +S LP+CS +++L  GKEIHAYA R   +  N+FV SALVDMYCN G VE  R
Sbjct: 293  KPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGR 352

Query: 1000 AVFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDMETA-GLVPNETTLASILPACVRS 1176
             VFD + +R++GLWNAMI+GYAQ+  D++AL LFI+ME A GL  N TT++SI+PA VR 
Sbjct: 353  LVFDGVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRC 412

Query: 1177 EAFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLI 1356
            E    KE IH YVIKRG+E ++++QNAL+DMYSR+G I  S++IF +MEDRD+VSWNT+I
Sbjct: 413  EGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTII 472

Query: 1357 TGCIICGCYSQAFRLVNQMQK-------NGNFIEGIDKESLHYKPNYITLMTLLPACGSL 1515
            T  +ICG  S A  L+++MQ+       +G++    D++ + +KPN ITLMT+LP C SL
Sbjct: 473  TSYVICGRSSDALLLLHEMQRIEEKSTYDGDYN---DEKQVPFKPNSITLMTVLPGCASL 529

Query: 1516 AALGKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLI 1695
            +AL KG+EIH YAIR  L S + VGSALVDMYAKCG LN AR VFD+MP RNV+TWNV+I
Sbjct: 530  SALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVII 589

Query: 1696 MAYGMHGQGEEAIGLFELMIAKG----EAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK 1863
            MAYGMHG+G+E++ LFE M+A+G    E KP+ VT IA  A+CSHSGMV  G+ LFH +K
Sbjct: 590  MAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMK 649

Query: 1864 -ECGVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTEL 2040
             E G+E   DHYAC+VDL+GRAG+++EAY L+ +M +  DK GAWSSLLGACRI+ N E+
Sbjct: 650  NEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEI 709

Query: 2041 GEVAAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGD 2220
            GE+AA++L +L+P+ +SHYVLLSNIY++ G +DKAM +R+ MK  GV+KE GCSWIE GD
Sbjct: 710  GEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGD 769

Query: 2221 DVHRFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEK 2400
            +VH+F AGD SH QS +++ +LE+L +R+KKEGYVPD +CVLHD++E EKE +LCGHSEK
Sbjct: 770  EVHKFLAGDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEK 829

Query: 2401 LAISFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCS 2580
            LAI+FGILNTPPG+TIRVAKNLRVCNDCH +SKFISK+  R+IILRD RRFHHFKDG+CS
Sbjct: 830  LAIAFGILNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCS 889

Query: 2581 CGDYW 2595
            CGDYW
Sbjct: 890  CGDYW 894


>ref|XP_006402877.1| hypothetical protein EUTSA_v10005782mg [Eutrema salsugineum]
            gi|557103976|gb|ESQ44330.1| hypothetical protein
            EUTSA_v10005782mg [Eutrema salsugineum]
          Length = 888

 Score =  961 bits (2484), Expect = 0.0
 Identities = 480/833 (57%), Positives = 612/833 (73%), Gaps = 3/833 (0%)
 Frame = +1

Query: 106  WLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAASV 285
            W+++LRS  R+N    A+ TY+DM   G+ PD+                 +G+Q+HA   
Sbjct: 63   WIDSLRSKVRSNLLREAVFTYIDMVLLGIKPDNFVFPALLKAVADLQDMDLGKQIHAHVY 122

Query: 286  KRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXXX 465
            K GY    VTVANTLVN Y +CGD  +  KVFDRI ER++VSWNS I             
Sbjct: 123  KFGYGVDSVTVANTLVNFYRKCGDFGAVYKVFDRISERNQVSWNSMISSLCSFEKWEMAL 182

Query: 466  XXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAFN 645
              FR + +E                CSNL    G+ +GKQ+H Y+LR     S   F  N
Sbjct: 183  EAFRCMLDENVEPSSFTLVSVAIA-CSNLPIPEGLMMGKQVHAYSLRKGDLNS---FIIN 238

Query: 646  ALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKP 825
             L+AMY KLG++  +  L   F+ R++VTWNT++SSL QN++F EA+  L EMVL G++P
Sbjct: 239  TLVAMYGKLGKLASSKILLGTFEGRNLVTWNTVLSSLCQNEQFLEALEYLREMVLKGVEP 298

Query: 826  DGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAV 1005
            DG T+SS LP CS +EML  GKE+HAYA +N  L  N+FV SALVDMYCN   V  AR V
Sbjct: 299  DGFTISSVLPVCSHLEMLRTGKEMHAYALKNGSLDENSFVGSALVDMYCNCKQVLSARRV 358

Query: 1006 FDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDME-TAGLVPNETTLASILPACVRSEA 1182
            FD I +RR+GLWNAMI+GYAQN  D+EAL LFI+ME T GL+ N TT+ASI+PACVRS A
Sbjct: 359  FDVIFDRRIGLWNAMIAGYAQNEHDEEALSLFIEMEETTGLLANTTTMASIVPACVRSNA 418

Query: 1183 FPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITG 1362
            F  KE IH +V+KRG++GD+FVQNALMDMYSR+GKIDI++ IF  MEDRD+V+WNT+ITG
Sbjct: 419  FSRKEAIHGFVMKRGLDGDRFVQNALMDMYSRLGKIDIAEMIFCKMEDRDLVTWNTMITG 478

Query: 1363 CIICGCYSQAFRLVNQMQKNGNFI-EGIDKESLHYKPNYITLMTLLPACGSLAALGKGQE 1539
             +   C+  A  ++++MQ     + EG+ +  L  KPN ITLMT+LP+C +L+AL KG+E
Sbjct: 479  YVFSECHEDALLVLHKMQNIERKVGEGVSRVGL--KPNSITLMTILPSCAALSALAKGKE 536

Query: 1540 IHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQ 1719
            IH YAI+  L +D+AVGSALVDMYAKCG L+ +R VFD++P +NV+TWNV+IMAYGMHG 
Sbjct: 537  IHAYAIKNNLATDVAVGSALVDMYAKCGCLHMSRKVFDQIPIKNVITWNVIIMAYGMHGN 596

Query: 1720 GEEAIGLFELMIAKGEAKPSSVTIIAALAACSHSGMVSRGMKLFHTIKE-CGVEANADHY 1896
            G++AI L ++M+ + + KP+ VT+I+  AACSHSGMV  G+K+F+ +K+  GVE ++DHY
Sbjct: 597  GQDAIELLKMMMVQ-KVKPNEVTLISVFAACSHSGMVDEGLKIFYNMKKHYGVEPSSDHY 655

Query: 1897 ACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEVAAKHLFELE 2076
            ACVVDLLGRAG + EAY+L+  M    DKAGAWSSLLGACRI  N E+GE+AA++L +LE
Sbjct: 656  ACVVDLLGRAGRVKEAYELMNMMPLGFDKAGAWSSLLGACRIQNNQEIGEIAAQNLIQLE 715

Query: 2077 PEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVHRFTAGDSSH 2256
            P+ +SHYVLL+NIY++ G +DKA EVR+ MK +GVRKE GCSWIE GD VH+F AGDSSH
Sbjct: 716  PKVASHYVLLANIYSSAGLWDKATEVRRKMKEQGVRKEPGCSWIEYGDGVHKFVAGDSSH 775

Query: 2257 KQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAISFGILNTPP 2436
             QS +++ YLESLW++M+KEGYVPD SCVLH+VEE EKEVLLCGHSEKLAI+FGILNT P
Sbjct: 776  PQSEKLHGYLESLWEKMRKEGYVPDTSCVLHNVEEDEKEVLLCGHSEKLAIAFGILNTSP 835

Query: 2437 GSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGDYW 2595
            G+ IRVAKNLRVCNDCH ++KFISK+V R+IILRD RRFHHFK+G+CSCGDYW
Sbjct: 836  GTVIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHHFKNGTCSCGDYW 888


>ref|XP_004295518.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 893

 Score =  957 bits (2475), Expect = 0.0
 Identities = 474/841 (56%), Positives = 620/841 (73%), Gaps = 11/841 (1%)
 Frame = +1

Query: 106  WLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAASV 285
            W++T+R+  R+  ++ A++TY++MT +G+ PD+                 +G+Q+HA  V
Sbjct: 57   WIDTIRTQTRSGHYNEAISTYINMTRSGIRPDNFAFPAVLKAVAALHDLRLGQQVHACVV 116

Query: 286  KRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXXX 465
            K GY +  VTVAN+LVN+Y +CGD+  A KVFD + ERD+VSWNS I             
Sbjct: 117  KFGYESGSVTVANSLVNVYGKCGDIGDAYKVFDGMTERDQVSWNSMIAALCRFEEWELAL 176

Query: 466  XXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAFN 645
              FRS+ E+                CSNLD+  G+RLGKQ+HGY++R       K F  N
Sbjct: 177  EAFRSMFEDNVVPSSFTLVSAALA-CSNLDKRDGLRLGKQVHGYSVR---MCESKTFTVN 232

Query: 646  ALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKP 825
            AL++MYAKLG V  +  +FE F++ D+V+WNTM+SSL+QNDRF EA+     M+L GI+P
Sbjct: 233  ALMSMYAKLGMVGYSRGVFELFEECDLVSWNTMVSSLSQNDRFMEALEFFRLMILEGIRP 292

Query: 826  DGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAV 1005
            DGVT++S LP+CS +EML AGKEIHAYA R + L  N++V SALVDMYCN   VE  R V
Sbjct: 293  DGVTIASVLPACSHLEMLEAGKEIHAYALRANELTGNSYVGSALVDMYCNCREVESGRRV 352

Query: 1006 FDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDM-ETAGLVPNETTLASILPACVRSEA 1182
            FD + E ++ LWNAMI+GYAQN  D+EAL LF++M   +GL PN TT++SI+PACVR EA
Sbjct: 353  FDAVMEWKVPLWNAMITGYAQNEYDEEALDLFLEMYAVSGLNPNATTMSSIVPACVRCEA 412

Query: 1183 FPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITG 1362
            F  KE IH++VIKR +E ++++QNALMDMYSR+G+  IS+ IF +ME +D+VSWNT+ITG
Sbjct: 413  FSGKESIHAFVIKRSLEKNRYIQNALMDMYSRMGRTGISETIFNSMEGKDIVSWNTMITG 472

Query: 1363 CIICGCYSQAFRLVNQMQ-----KNGNFIEGIDKESLHYKPNYITLMTLLPACGSLAALG 1527
             +I G +  A  L+ +MQ     KN +     D+  +  KPN ITLMTLLP+C  L+AL 
Sbjct: 473  YVISGRHDDALNLLYEMQRVEENKNTDSTGYDDERRVPLKPNTITLMTLLPSCAVLSALA 532

Query: 1528 KGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYG 1707
            KG+EIH YA R  L  DIAVGSALVDMYAKCG L+ +R +F++MP +NV+TWNVLIMAYG
Sbjct: 533  KGKEIHAYATRHLLALDIAVGSALVDMYAKCGCLDLSRAMFNQMPLKNVITWNVLIMAYG 592

Query: 1708 MHGQGEEAIGLFELMIAKG----EAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK-ECG 1872
            MHG+GEEA+ LF+ M+ +G    E +P+ VT IA  AACSHSGMV  G+ LFHT+K E G
Sbjct: 593  MHGRGEEALELFKNMVDEGRWNKELRPNEVTFIAIFAACSHSGMVEEGLNLFHTMKQEHG 652

Query: 1873 VEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEVA 2052
            +E   DHYACVVDLLGRAG ++ AY+++ +M ++ DKAGAWSSLLGACR+H N E+GE+A
Sbjct: 653  IEPAPDHYACVVDLLGRAGSVERAYEIVKTMPSKFDKAGAWSSLLGACRLHQNVEIGEIA 712

Query: 2053 AKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVHR 2232
            A HL +LEP+ +SHYVLLSNIY++ G ++KAM++R+ MK  GVRKE GCSWIE  D+VH+
Sbjct: 713  AHHLLQLEPDVASHYVLLSNIYSSSGLWEKAMDIRRKMKEMGVRKEPGCSWIEFEDEVHK 772

Query: 2233 FTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAIS 2412
            F AGD SH QS +++ YLE+L +RMKKEGYVPD SCVLH+V+E EKE LLCGHSEKLA++
Sbjct: 773  FLAGDMSHPQSEQLHEYLETLSERMKKEGYVPDTSCVLHNVDEDEKETLLCGHSEKLAMA 832

Query: 2413 FGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGDY 2592
            FG+LNT PG+TIRVAKNLRVCNDCH ++K+ISK++ R+IILRD RRFHHF++G+CSCGDY
Sbjct: 833  FGLLNTRPGTTIRVAKNLRVCNDCHLAAKYISKMLDREIILRDVRRFHHFRNGNCSCGDY 892

Query: 2593 W 2595
            W
Sbjct: 893  W 893



 Score =  184 bits (466), Expect = 2e-43
 Identities = 125/422 (29%), Positives = 205/422 (48%), Gaps = 4/422 (0%)
 Frame = +1

Query: 721  DIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKPDGVTLSSALPSCSFMEMLNAGKEIH 900
            D  TW   I + T++  ++EAI+    M  +GI+PD     + L + + +  L  G+++H
Sbjct: 53   DSRTWIDTIRTQTRSGHYNEAISTYINMTRSGIRPDNFAFPAVLKAVAALHDLRLGQQVH 112

Query: 901  AYAFRNSGLFLNTFVASALVDMYCNFGLVERARAVFDKIPERRLGLWNAMISGYAQNMLD 1080
            A   +      +  VA++LV++Y   G +  A  VFD + ER    WN+MI+   +    
Sbjct: 113  ACVVKFGYESGSVTVANSLVNVYGKCGDIGDAYKVFDGMTERDQVSWNSMIAALCRFEEW 172

Query: 1081 DEALKLFIDMETAGLVPNETTLASILPACV---RSEAFPNKEDIHSYVIKRGMEGDKFVQ 1251
            + AL+ F  M    +VP+  TL S   AC    + +     + +H Y + R  E   F  
Sbjct: 173  ELALEAFRSMFEDNVVPSSFTLVSAALACSNLDKRDGLRLGKQVHGYSV-RMCESKTFTV 231

Query: 1252 NALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITGCIICGCYSQAFRLVNQMQKNGNF 1431
            NALM MY+++G +  S+ +F   E+ D+VSWNT+++       + +A      M      
Sbjct: 232  NALMSMYAKLGMVGYSRGVFELFEECDLVSWNTMVSSLSQNDRFMEALEFFRLM-----I 286

Query: 1432 IEGIDKESLHYKPNYITLMTLLPACGSLAALGKGQEIHGYAIRQG-LDSDIAVGSALVDM 1608
            +EGI       +P+ +T+ ++LPAC  L  L  G+EIH YA+R   L  +  VGSALVDM
Sbjct: 287  LEGI-------RPDGVTIASVLPACSHLEMLEAGKEIHAYALRANELTGNSYVGSALVDM 339

Query: 1609 YAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQGEEAIGLFELMIAKGEAKPSSVT 1788
            Y  C  +   R VFD + +  V  WN +I  Y  +   EEA+ LF  M A     P++ T
Sbjct: 340  YCNCREVESGRRVFDAVMEWKVPLWNAMITGYAQNEYDEEALDLFLEMYAVSGLNPNATT 399

Query: 1789 IIAALAACSHSGMVSRGMKLFHTIKECGVEANADHYACVVDLLGRAGELDEAYQLIVSMD 1968
            + + + AC      S    +   + +  +E N      ++D+  R G    +  +  SM+
Sbjct: 400  MSSIVPACVRCEAFSGKESIHAFVIKRSLEKNRYIQNALMDMYSRMGRTGISETIFNSME 459

Query: 1969 NE 1974
             +
Sbjct: 460  GK 461


>ref|XP_004487896.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like isoform X1 [Cicer arietinum]
            gi|502085351|ref|XP_004487897.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 872

 Score =  953 bits (2463), Expect = 0.0
 Identities = 475/845 (56%), Positives = 617/845 (73%), Gaps = 14/845 (1%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            AW++ LRS  +++SFH A++TY +M +AGVPPD+                ++G+Q+H   
Sbjct: 34   AWIDRLRSQVQSSSFHQAISTYTNMVTAGVPPDNFAFPAVLKATAATQDLNLGKQIHGHV 93

Query: 283  VKRGYH--TSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXX 456
             K G    +S   VAN+LVNMY +CGD+D A +VFD I  RD+VSWNS I          
Sbjct: 94   FKFGQALPSSAAAVANSLVNMYGKCGDIDDARRVFDEISHRDDVSWNSMIAAACRFEKWE 153

Query: 457  XXXXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRF 636
                 FR +   E               CSNL  G+   LGKQ+H + LRN  +   + F
Sbjct: 154  LSIHLFR-LMLLEHVGPTSFTLVSVAHACSNLRNGL--LLGKQVHAFMLRNDDW---RTF 207

Query: 637  AFNALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAG 816
              NAL+ MYAKLGRV +A ALF+ FDD+D+V+WNT+ISSL+QNDRF EA+  LH M+ +G
Sbjct: 208  TNNALVTMYAKLGRVFEAKALFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHFMLQSG 267

Query: 817  IKPDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERA 996
            ++PDGVTL+SALP+CS +EML+ GKEIH++  RN+ L  N+FV SALVDMYCN    E+ 
Sbjct: 268  VRPDGVTLASALPACSHLEMLSYGKEIHSFVLRNNDLIENSFVGSALVDMYCNCNQPEKG 327

Query: 997  RAVFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDME-TAGLVPNETTLASILPACVR 1173
            R VFD +  + + +WNAMI+GY +N  D EA++LF++M    G+ PN  TL+S+LPACVR
Sbjct: 328  RIVFDGMFRKTVAVWNAMIAGYVRNEFDYEAIELFVEMVFELGMSPNSVTLSSVLPACVR 387

Query: 1174 SEAFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTL 1353
             EAF +KE IH  V+K G E DK+VQNALMDMYSR+G I+IS+ IF +M  RD+VSWNT+
Sbjct: 388  CEAFLDKEGIHGCVVKWGFEKDKYVQNALMDMYSRMGMIEISKSIFGSMSRRDIVSWNTM 447

Query: 1354 ITGCIICGCYSQAFRLVNQMQKN------GNFIEGIDKESLHYKPNYITLMTLLPACGSL 1515
            ITG ++CG ++ A  L++ MQ+         F +     S+  KPN +TLMT+LP C +L
Sbjct: 448  ITGYVVCGRHNDALNLLHDMQRGQEEDRINTFDDYEVNRSVPIKPNSVTLMTVLPGCAAL 507

Query: 1516 AALGKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLI 1695
            AALGKG+EIH YA++Q +  D+AVGSALVDMYAKCG LN +R VF++M  RNV+TWNVLI
Sbjct: 508  AALGKGKEIHAYAVKQMISKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLI 567

Query: 1696 MAYGMHGQGEEAIGLFELMIAKG----EAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK 1863
            MAYGMHG+GEEA+ LF  M+A+G    E +P+ VT IA  AACSHSGMV  G+ LFHT+K
Sbjct: 568  MAYGMHGKGEEALKLFRRMVAEGDKNIEIRPNEVTYIAIFAACSHSGMVDEGLNLFHTMK 627

Query: 1864 -ECGVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTEL 2040
             + G+E  +DHYAC+VDLLGR+G+++E+Y+LI +M + ++K  AWSSLLGA +IH N E+
Sbjct: 628  AKHGIEPTSDHYACLVDLLGRSGQIEESYKLIKTMPSNMNKVDAWSSLLGASKIHQNLEI 687

Query: 2041 GEVAAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGD 2220
            GE+AAKHLF LEP  +SHYVLLSNIY++ G +DKAM+VRK MK  GVRKE GCSWIE GD
Sbjct: 688  GEIAAKHLFVLEPNVASHYVLLSNIYSSAGLWDKAMDVRKKMKEMGVRKEPGCSWIEHGD 747

Query: 2221 DVHRFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEK 2400
            +VH+F AGD+SH QS E++ YLE+L  RMKKEGYVPD SCVLH+V+E EKE +LCGHSE+
Sbjct: 748  EVHKFLAGDTSHPQSKELHEYLETLSQRMKKEGYVPDTSCVLHNVDEEEKESMLCGHSER 807

Query: 2401 LAISFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCS 2580
            LAI+FG+LNT  G+TIRVAKNLRVCNDCH ++KFISK+V R+II+RD RRFHHF++G+CS
Sbjct: 808  LAIAFGLLNTSHGTTIRVAKNLRVCNDCHVATKFISKIVDREIIVRDVRRFHHFRNGTCS 867

Query: 2581 CGDYW 2595
            CGDYW
Sbjct: 868  CGDYW 872


>ref|XP_006290586.1| hypothetical protein CARUB_v10016675mg [Capsella rubella]
            gi|482559293|gb|EOA23484.1| hypothetical protein
            CARUB_v10016675mg [Capsella rubella]
          Length = 882

 Score =  953 bits (2463), Expect = 0.0
 Identities = 476/833 (57%), Positives = 611/833 (73%), Gaps = 3/833 (0%)
 Frame = +1

Query: 106  WLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAASV 285
            W+++LRS  RA+    A+ TY+DM   G+ PD                  +G+Q+HA   
Sbjct: 57   WIDSLRSKVRASLLREAVLTYIDMIVLGIKPDKFAFPALLKAVADLQDMDLGKQIHAHVY 116

Query: 286  KRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXXX 465
            K GY    VTVANTLVN+Y +CGD  +  KVFDRI ER++VSWNS I             
Sbjct: 117  KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 176

Query: 466  XXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAFN 645
              FR + +E                CSN+    G+RLGKQ+H Y+LR     S   F  N
Sbjct: 177  EAFRCMLDENVEPSSFTLVSVALA-CSNVPMPEGLRLGKQVHAYSLRKGELNS---FIIN 232

Query: 646  ALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKP 825
             L+AMY KLG++  + +L   F+ RD+VTWNT++SSL QN++F EA+  L EMVL G++P
Sbjct: 233  TLVAMYGKLGKLASSKSLLGSFEGRDLVTWNTLLSSLCQNEQFLEALEYLREMVLKGVEP 292

Query: 826  DGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAV 1005
            DG T+SS LP CS +EML  GKE+HAYA +N  L  N+FV SALVDMYCN   V  AR V
Sbjct: 293  DGFTISSVLPVCSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKRVLSARRV 352

Query: 1006 FDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDME-TAGLVPNETTLASILPACVRSEA 1182
            FD + +R++GLWNAMI+GYAQN  D EAL LFI+ME +AGL+ N TT+A ++PACVRS+A
Sbjct: 353  FDGMFDRKIGLWNAMITGYAQNEHDVEALLLFIEMEQSAGLLANTTTMAGVVPACVRSDA 412

Query: 1183 FPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITG 1362
            F  KE IH +V+KRG++ D+FV+NALMDMYSR+GKIDI+++IF+ MEDRD+V+WNT+ITG
Sbjct: 413  FSKKEAIHGFVVKRGLDRDRFVKNALMDMYSRLGKIDIAKQIFSKMEDRDLVTWNTMITG 472

Query: 1363 CIICGCYSQAFRLVNQMQK-NGNFIEGIDKESLHYKPNYITLMTLLPACGSLAALGKGQE 1539
             +    +  A  ++++MQ       EG  +  L  KPN ITLMT+LP+C +L+AL KG+E
Sbjct: 473  YVFLERHEDALLVLHKMQNLERKASEGAIRVGL--KPNSITLMTILPSCAALSALAKGKE 530

Query: 1540 IHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQ 1719
            IH YAI+  L +D+AVGSA+VDMYAKCG L+ +R VFD++P RNV+TWNV+IMAYGMHG 
Sbjct: 531  IHAYAIKNNLATDVAVGSAIVDMYAKCGCLHMSRKVFDQIPFRNVITWNVIIMAYGMHGN 590

Query: 1720 GEEAIGLFELMIAKGEAKPSSVTIIAALAACSHSGMVSRGMKLFHTIKE-CGVEANADHY 1896
            G++AI L  +M+ +G AKP+ VT I+  AACSHSGMV  G+++F+ +K   GVE ++DHY
Sbjct: 591  GQDAIDLLRMMMVQG-AKPNEVTFISVFAACSHSGMVDEGLRIFYNMKNNYGVEPSSDHY 649

Query: 1897 ACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEVAAKHLFELE 2076
            ACVVDLLGRAG + EAYQL+  M  + DKAGAWSSLLGACRIH N E+GEV A++L +LE
Sbjct: 650  ACVVDLLGRAGRVKEAYQLMNMMPLDFDKAGAWSSLLGACRIHNNLEIGEVVAQNLIQLE 709

Query: 2077 PEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVHRFTAGDSSH 2256
            P+ +SHYVLL+NIY++ G +DKA EVR+ MK +GVRKE GCSWIE GD+VH+F AGDSSH
Sbjct: 710  PKVASHYVLLANIYSSAGHWDKATEVRRKMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSH 769

Query: 2257 KQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAISFGILNTPP 2436
             QS +++ YLE+LW++M++EGYVPD SCVLH+VEE EKEVLLCGHSEKLAI+FGILNT P
Sbjct: 770  PQSEKLHGYLETLWEKMREEGYVPDTSCVLHNVEEDEKEVLLCGHSEKLAIAFGILNTSP 829

Query: 2437 GSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGDYW 2595
            G+ IRVAKNLRVCNDCH ++KFISK+V R+IILRD RRFHHFK+G CSCGDYW
Sbjct: 830  GTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHHFKNGICSCGDYW 882


>ref|XP_006597752.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 880

 Score =  950 bits (2455), Expect = 0.0
 Identities = 470/844 (55%), Positives = 608/844 (72%), Gaps = 14/844 (1%)
 Frame = +1

Query: 106  WLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAASV 285
            W++ LRS   ++SF  A++TY  M +A  PPD+                 +G+Q+HA   
Sbjct: 43   WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 102

Query: 286  KRGYHT-SPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXX 462
            K G+   S V VAN+LVNMY +CGDL +A +VFD IP+RD VSWNS I            
Sbjct: 103  KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 162

Query: 463  XXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAF 642
               FR +   E               CS++  G+  RLGKQ+H Y LRN      + +  
Sbjct: 163  LHLFR-LMLSENVDPTSFTLVSVAHACSHVRGGV--RLGKQVHAYTLRNGDL---RTYTN 216

Query: 643  NALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIK 822
            NAL+ MYA+LGRV+DA ALF  FD +D+V+WNT+ISSL+QNDRF EA+  ++ M++ G++
Sbjct: 217  NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 276

Query: 823  PDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARA 1002
            PDGVTL+S LP+CS +E L  G+EIH YA RN  L  N+FV +ALVDMYCN    ++ R 
Sbjct: 277  PDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL 336

Query: 1003 VFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDM-ETAGLVPNETTLASILPACVRSE 1179
            VFD +  R + +WNA+++GYA+N  DD+AL+LF++M   +   PN TT AS+LPACVR +
Sbjct: 337  VFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCK 396

Query: 1180 AFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLIT 1359
             F +KE IH Y++KRG   DK+VQNALMDMYSR+G+++IS+ IF  M  RD+VSWNT+IT
Sbjct: 397  VFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMIT 456

Query: 1360 GCIICGCYSQAFRLVNQMQK------NGNFIEGIDKESLHYKPNYITLMTLLPACGSLAA 1521
            GCI+CG Y  A  L+++MQ+      +  F++  D   + +KPN +TLMT+LP C +LAA
Sbjct: 457  GCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAA 516

Query: 1522 LGKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMA 1701
            LGKG+EIH YA++Q L  D+AVGSALVDMYAKCG LN A  VFD+MP RNV+TWNVLIMA
Sbjct: 517  LGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMA 576

Query: 1702 YGMHGQGEEAIGLFELMIAKGEA-----KPSSVTIIAALAACSHSGMVSRGMKLFHTIKE 1866
            YGMHG+GEEA+ LF +M A G +     +P+ VT IA  AACSHSGMV  G+ LFHT+K 
Sbjct: 577  YGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKA 636

Query: 1867 C-GVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELG 2043
              GVE   DHYAC+VDLLGR+G + EAY+LI +M + L+K  AWSSLLGACRIH + E G
Sbjct: 637  SHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFG 696

Query: 2044 EVAAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDD 2223
            E+AAKHLF LEP  +SHYVL+SNIY++ G +D+A+ VRK MK  GVRKE GCSWIE GD+
Sbjct: 697  EIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDE 756

Query: 2224 VHRFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKL 2403
            VH+F +GD+SH QS E++ YLE+L  RM+KEGYVPD+SCVLH+V++ EKE +LCGHSE+L
Sbjct: 757  VHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERL 816

Query: 2404 AISFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSC 2583
            AI+FG+LNTPPG+TIRVAKNLRVCNDCH ++K ISK+V R+IILRD RRFHHF +G+CSC
Sbjct: 817  AIAFGLLNTPPGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSC 876

Query: 2584 GDYW 2595
            GDYW
Sbjct: 877  GDYW 880


>gb|ESW10852.1| hypothetical protein PHAVU_009G243400g [Phaseolus vulgaris]
          Length = 882

 Score =  946 bits (2444), Expect = 0.0
 Identities = 473/842 (56%), Positives = 610/842 (72%), Gaps = 12/842 (1%)
 Frame = +1

Query: 106  WLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAASV 285
            W++ LRS  +++SF  A+ATY  M +A   PD+                S+G+QLHA   
Sbjct: 48   WIDLLRSQTQSSSFRDAIATYAAMLAAAAAPDNFAFPAVLKAATAVHDLSLGKQLHAHVF 107

Query: 286  KRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXXX 465
            K G   S V VANTL+NMY +CGDL +A ++FD IPERD VSWNS I             
Sbjct: 108  KFGQAPS-VAVANTLLNMYGKCGDLAAARRLFDEIPERDHVSWNSMIATLCRFEEWELSL 166

Query: 466  XXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAFN 645
              FR +   E               CS L  G   RLGKQ+H + LRN      + +  N
Sbjct: 167  HLFR-LMLSENVEPSSFTLVSVAHACSYLRGGT--RLGKQVHAFTLRNDDL---RTYTNN 220

Query: 646  ALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKP 825
            AL++MYA+LGRV+DA ALF+ FD +DIV+WNT+ISSL+QNDRF EA+  ++ M++ G++P
Sbjct: 221  ALVSMYARLGRVNDAKALFDVFDGKDIVSWNTVISSLSQNDRFEEALMYMYLMIVDGVRP 280

Query: 826  DGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAV 1005
            DGVTL+S LP+CS +E L  G+EIH YA +N  L  N+FV +ALVDMYCN     + R V
Sbjct: 281  DGVTLASVLPACSQLERLRIGREIHCYALKNGDLIENSFVGTALVDMYCNCKQAVKGRLV 340

Query: 1006 FDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDM-ETAGLVPNETTLASILPACVRSEA 1182
            FD++  + + +WNAM++GYA+N  DD+AL+LFI+M   +   PN TTL+S+LPACVR E+
Sbjct: 341  FDRVWRKTVAVWNAMLAGYARNEFDDQALRLFIEMISESEFCPNATTLSSVLPACVRCES 400

Query: 1183 FPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITG 1362
            F +KE IH Y++KRG   DK+V+NALMDMYSR+G+I IS+ IF  M  RD+VSWNT+ITG
Sbjct: 401  FLDKEGIHGYIVKRGFGKDKYVKNALMDMYSRMGRIQISKMIFGGMGRRDIVSWNTMITG 460

Query: 1363 CIICGCYSQAFRLVNQMQKN------GNFIEGIDKESLHYKPNYITLMTLLPACGSLAAL 1524
            C++CG Y  A  L+++MQ+         F +  D+ESL  KPN +TLMT+LP C +LAAL
Sbjct: 461  CVVCGQYEDALNLLHEMQRGQGEDGGDTFDDCEDEESLPLKPNSVTLMTVLPGCAALAAL 520

Query: 1525 GKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAY 1704
            GKG+EIH YAI++ L  D+AVGSALVDMYAKCG LN AR+VFD+MP RNV+TWNVLIMAY
Sbjct: 521  GKGKEIHAYAIKEMLAMDVAVGSALVDMYAKCGCLNLARIVFDQMPIRNVITWNVLIMAY 580

Query: 1705 GMHGQGEEAIGLFELMIAKGE----AKPSSVTIIAALAACSHSGMVSRGMKLFHTIKEC- 1869
            GMHG+GEEA+ LF  M   G      +P+ VT IA  AACSHSGMV+ G+ LFHT+K   
Sbjct: 581  GMHGKGEEALKLFRRMTEGGSNREVIRPNEVTYIAIFAACSHSGMVNEGLHLFHTMKASH 640

Query: 1870 GVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEV 2049
            G+EA ADHYAC+VDLLGR+G + EA +L+ +M + L+K  AWSSLLGACRIH + E+GE+
Sbjct: 641  GIEARADHYACLVDLLGRSGRIKEACELVHTMPSSLNKIDAWSSLLGACRIHQSVEIGEI 700

Query: 2050 AAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVH 2229
            AAK+L  LEP  +SHYVLLSNIY++ G +++A+EVRK MK  GVRKE GCSWIE GD+VH
Sbjct: 701  AAKNLLVLEPNVASHYVLLSNIYSSAGLWEQAIEVRKKMKEMGVRKEPGCSWIEHGDEVH 760

Query: 2230 RFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAI 2409
            +F AGD+SH QS E++ Y+E+L  RM+KEGYVPD SCVLH+V++ EKE +LCGHSE+LAI
Sbjct: 761  KFLAGDASHPQSKELHEYIETLSQRMRKEGYVPDTSCVLHNVDDEEKETMLCGHSERLAI 820

Query: 2410 SFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGD 2589
            +FG+LNT PG+TIRVAKNLRVCNDCH ++K ISK+V R+IILRD RRFHHF++G+CSCGD
Sbjct: 821  AFGLLNTLPGTTIRVAKNLRVCNDCHIATKIISKIVDREIILRDVRRFHHFRNGTCSCGD 880

Query: 2590 YW 2595
            YW
Sbjct: 881  YW 882



 Score =  106 bits (265), Expect = 5e-20
 Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 5/376 (1%)
 Frame = +1

Query: 1015 IPERRLGLWNAMISGYAQNMLDDEALKLFIDMETAGLVPNETTLASILPACVRSEAFPNK 1194
            +  R    W  ++    Q+    +A+  +  M  A   P+     ++L A          
Sbjct: 40   VERRSPSQWIDLLRSQTQSSSFRDAIATYAAMLAAAAAPDNFAFPAVLKAATAVHDLSLG 99

Query: 1195 EDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITGCIIC 1374
            + +H++V K G      V N L++MY + G +  ++++F  + +RD VSWN++I      
Sbjct: 100  KQLHAHVFKFGQAPSVAVANTLLNMYGKCGDLAAARRLFDEIPERDHVSWNSMIATLCRF 159

Query: 1375 GCYSQAFRLVNQMQKNGNFIEGIDKESLHYKPNYITLMTLLPACGSL-AALGKGQEIHGY 1551
              +  +  L   M             S + +P+  TL+++  AC  L      G+++H +
Sbjct: 160  EEWELSLHLFRLML------------SENVEPSSFTLVSVAHACSYLRGGTRLGKQVHAF 207

Query: 1552 AIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQGEEA 1731
             +R   D      +ALV MYA+ G +N A+ +FD    +++V+WN +I +   + + EEA
Sbjct: 208  TLRND-DLRTYTNNALVSMYARLGRVNDAKALFDVFDGKDIVSWNTVISSLSQNDRFEEA 266

Query: 1732 IGLFELMIAKGEAKPSSVTIIAALAACSHSGMVSRGMKLF-HTIKECGVEANADHYACVV 1908
            +    LMI  G  +P  VT+ + L ACS    +  G ++  + +K   +  N+     +V
Sbjct: 267  LMYMYLMIVDG-VRPDGVTLASVLPACSQLERLRIGREIHCYALKNGDLIENSFVGTALV 325

Query: 1909 DLLGRAGELDEAYQLIVSMDNELDKAGA-WSSLLGACRIHLNTELGEVAAKHLFEL--EP 2079
            D+        +A +  +  D    K  A W+++L     +   E  + A +   E+  E 
Sbjct: 326  DMYCNC---KQAVKGRLVFDRVWRKTVAVWNAMLAG---YARNEFDDQALRLFIEMISES 379

Query: 2080 EDSSHYVLLSNIYAAC 2127
            E   +   LS++  AC
Sbjct: 380  EFCPNATTLSSVLPAC 395


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
            lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
            ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score =  946 bits (2444), Expect = 0.0
 Identities = 470/833 (56%), Positives = 604/833 (72%), Gaps = 3/833 (0%)
 Frame = +1

Query: 106  WLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAASV 285
            W++ LRS  R+N    A+ TY+DM   G+ PD+                 +G+Q+HA   
Sbjct: 61   WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 286  KRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXXX 465
            K GY    VTVANTLVN+Y +CGD  +  KVFDRI ER++VSWNS I             
Sbjct: 121  KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 466  XXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAFN 645
              FR + +E+               CSN     G+ +GKQ+H Y LR     S   F  N
Sbjct: 181  EAFRCMLDEDVEPSSFTLVSVALA-CSNFPMPEGLLMGKQVHAYGLRKGELNS---FIIN 236

Query: 646  ALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKP 825
             L+AMY K+G++  +  L   F+ RD+VTWNT++SSL QN++F EA+  L EMVL G++P
Sbjct: 237  TLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEP 296

Query: 826  DGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAV 1005
            DG T+SS LP+CS +EML  GKE+HAYA +N  L  N+FV SALVDMYCN   V     V
Sbjct: 297  DGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRV 356

Query: 1006 FDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDME-TAGLVPNETTLASILPACVRSEA 1182
            FD + +R++GLWNAMI+GYAQN  D+EAL LFI+ME +AGL+ N TT+A ++PACVRS A
Sbjct: 357  FDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGA 416

Query: 1183 FPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITG 1362
            F  KE IH +V+KRG++ D+FVQNALMDMYSR+GKIDI+++IF  MEDRD+V+WNT+ITG
Sbjct: 417  FSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITG 476

Query: 1363 CIICGCYSQAFRLVNQMQ-KNGNFIEGIDKESLHYKPNYITLMTLLPACGSLAALGKGQE 1539
             +    +  A  ++++MQ       E   + SL  KPN ITLMT+LP+C +L+AL KG+E
Sbjct: 477  YVFSERHEDALLMLHKMQILERKASERASRVSL--KPNSITLMTILPSCAALSALAKGKE 534

Query: 1540 IHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQ 1719
            IH YAI+  L +D+AVGSALVDMYAKCG L  +R VFD++P RNV+TWNV++MAYGMHG 
Sbjct: 535  IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGN 594

Query: 1720 GEEAIGLFELMIAKGEAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK-ECGVEANADHY 1896
             ++AI +  +M+ +G  KP+ VT I+  AACSHSGMV+ G+K+F+ +K + GVE ++DHY
Sbjct: 595  SQDAIDMLRMMMVQG-VKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHY 653

Query: 1897 ACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEVAAKHLFELE 2076
            ACVVDLLGRAG + EAYQLI  +    DKAGAWSSLLGACRIH N E+GE+AA++L +LE
Sbjct: 654  ACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLE 713

Query: 2077 PEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVHRFTAGDSSH 2256
            P  +SHYVLL+NIY++ G + KA EVR+NMK +GVRKE GCSWIE GD+VH+F AGDSSH
Sbjct: 714  PNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSH 773

Query: 2257 KQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAISFGILNTPP 2436
             QS ++  YLE+LW+RM+KEGY+PD SCVLH+VEE EKE+LLCGHSEKLAI+FGILNT P
Sbjct: 774  PQSEKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP 833

Query: 2437 GSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGDYW 2595
            G+ IRVAKNLRVCNDCH ++KFISK+V R+IILRD RRFHHFK+G+CSCGDYW
Sbjct: 834  GTIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886


>ref|XP_006363206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Solanum tuberosum]
          Length = 889

 Score =  945 bits (2442), Expect = 0.0
 Identities = 471/834 (56%), Positives = 600/834 (71%), Gaps = 3/834 (0%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            +W++ LRS  R N F  A+ TY+ MTS GV PD+                ++G+Q++ A 
Sbjct: 60   SWIDALRSQVRLNCFKEAIFTYIQMTSEGVRPDNFVFPAVLKAATGLQDLNLGKQIYGAV 119

Query: 283  VKRGYHTSPVTVANTLVNMYARCG-DLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXX 459
            VK GY T+ VTVAN+++++  RCG  +D   KVFDRI +RD+VSWNS I           
Sbjct: 120  VKFGYDTTSVTVANSVIHLLGRCGGSIDDVYKVFDRITQRDQVSWNSLINALCKFEKWEL 179

Query: 460  XXXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFA 639
                FR I  +                CSNL +  G+RLGKQ+HG++LR       + + 
Sbjct: 180  ALEAFRLIGLD-GFEASSFTLVSIALACSNLPRTDGLRLGKQVHGHSLRIDD---RRTYT 235

Query: 640  FNALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGI 819
             NAL++MYAKLGRVDD+ A+FE F DRDIV+WNT+ISS +QND+F EA+     M+   I
Sbjct: 236  NNALMSMYAKLGRVDDSRAVFELFADRDIVSWNTIISSFSQNDQFREALDCFRVMIQEEI 295

Query: 820  KPDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERAR 999
            KPDGVT+SS +P+CS + +L+ GKEIH Y  +N  L  N+FV S+LVDMYCN   VE   
Sbjct: 296  KPDGVTISSVVPACSHLTLLDVGKEIHCYVLKNDDLIGNSFVDSSLVDMYCNCQQVESGS 355

Query: 1000 AVFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDM-ETAGLVPNETTLASILPACVRS 1176
             VFD   +R +G+WNAM++GY QN    EAL LFI+M E +GL PN TT+AS+ PACV  
Sbjct: 356  RVFDSALKRSIGIWNAMLAGYTQNGFFTEALTLFIEMMEFSGLSPNPTTVASVFPACVHC 415

Query: 1177 EAFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLI 1356
            EAF  KE IH YVIK G   +K+VQNALMD+YSR+GKI+IS+ IF  ME +D+VSWNT+I
Sbjct: 416  EAFTLKEVIHGYVIKLGFSDEKYVQNALMDLYSRMGKINISKYIFDNMESKDIVSWNTMI 475

Query: 1357 TGCIICGCYSQAFRLVNQMQKNGNFIEGIDKESLHYKPNYITLMTLLPACGSLAALGKGQ 1536
            TG ++CG +  A  ++++MQ      +  +      KPN ITLMT+LP C SL AL KG+
Sbjct: 476  TGFVVCGYHEDALIMLHEMQTTKRHNDSENNVEFLLKPNSITLMTVLPGCASLVALAKGK 535

Query: 1537 EIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHG 1716
            EIH YAIR  L  DIAVGSALVDMYAKCG L+ AR VFD M  +NV+TWNVLIMAYGMHG
Sbjct: 536  EIHAYAIRNALAMDIAVGSALVDMYAKCGCLDIARRVFDSMTTKNVITWNVLIMAYGMHG 595

Query: 1717 QGEEAIGLFELMIAKGEAKPSSVTIIAALAACSHSGMVSRGMKLFHTIKEC-GVEANADH 1893
            +GEEA+ LF +M+ + + KP++VT IA  A CSHSGMV +G +LF  +K   G+E  ADH
Sbjct: 596  KGEEALELFRMMVLERKVKPNNVTFIAIFAGCSHSGMVDQGRELFREMKNAYGIEPTADH 655

Query: 1894 YACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEVAAKHLFEL 2073
            YAC+VDLLGR+G L+EAYQL+  M ++ +K GAWSSLLGACRIH N ELGE++A++LFEL
Sbjct: 656  YACIVDLLGRSGHLEEAYQLVNEMPSKYNKIGAWSSLLGACRIHRNVELGEISARNLFEL 715

Query: 2074 EPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVHRFTAGDSS 2253
            +   +SHYVLLSNIY++ G ++KA  VR+NMK  GVRKE GCSWIE GD+VH+F AGD+S
Sbjct: 716  DSHVASHYVLLSNIYSSAGIWEKANMVRRNMKKVGVRKEPGCSWIEFGDEVHKFVAGDAS 775

Query: 2254 HKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAISFGILNTP 2433
            H QS ++Y YLE+L ++MKKEGYVPD SCVLH+V E EKE LLCGHSEKLAI+FGILNTP
Sbjct: 776  HPQSEQLYGYLETLSEKMKKEGYVPDTSCVLHNVNEDEKENLLCGHSEKLAIAFGILNTP 835

Query: 2434 PGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGDYW 2595
            PG+ IR+AKNLRVCNDCHE++KFISK+V R+II+RD RRFHHF++G+CSCGDYW
Sbjct: 836  PGTPIRIAKNLRVCNDCHEATKFISKIVNREIIVRDVRRFHHFRNGTCSCGDYW 889


>ref|XP_004233766.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Solanum lycopersicum]
          Length = 889

 Score =  943 bits (2438), Expect = 0.0
 Identities = 468/834 (56%), Positives = 601/834 (72%), Gaps = 3/834 (0%)
 Frame = +1

Query: 103  AWLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            +W++TLRS  R N F  A+ TY+ MTS GV PD+                ++G+Q++ A 
Sbjct: 60   SWIDTLRSQVRLNCFKEAIFTYIQMTSEGVRPDNFVFPAVLKAATGLQDLNLGKQIYGAV 119

Query: 283  VKRGYHTSPVTVANTLVNMYARCG-DLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXX 459
            VK GY T  VTV+N+++++  RCG  +D   K+FDRI +RD+VSWNS I           
Sbjct: 120  VKFGYDTISVTVSNSVIHLLGRCGGSIDDVYKLFDRITQRDQVSWNSLINALCKFEKWEL 179

Query: 460  XXXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFA 639
                FR +   +               CSNL +  G+RLGKQ+HGY+LR       + + 
Sbjct: 180  ALEAFR-LMGFDGFEASSFTLVSIALACSNLPRTDGLRLGKQVHGYSLRIDD---RRTYT 235

Query: 640  FNALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGI 819
             NAL++MYAKLGRVDD+ A+FE F DRDIV+WNT+ISS +QND+F EA+     M+   I
Sbjct: 236  NNALMSMYAKLGRVDDSRAVFELFADRDIVSWNTIISSFSQNDQFREALDSFRVMIQEEI 295

Query: 820  KPDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERAR 999
            KPDGVT+SS +P+CS + +L+ GK+IH Y  +N  L  N+FV S+LVDMYCN   VE  R
Sbjct: 296  KPDGVTISSVVPACSHLTLLDVGKQIHCYVLKNDDLIGNSFVDSSLVDMYCNCQQVESGR 355

Query: 1000 AVFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDM-ETAGLVPNETTLASILPACVRS 1176
             VFD   +R +G+WNAM++GY QN    EAL LFI+M E +GL PN TT+AS+ PACV  
Sbjct: 356  RVFDSALKRSIGIWNAMLAGYTQNGFFTEALMLFIEMLEFSGLSPNPTTVASVFPACVHC 415

Query: 1177 EAFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLI 1356
            EAF  KE IH YVIK G   +K+VQNALMD+YSR+GKI+IS+ IF  ME +D+VSWNT+I
Sbjct: 416  EAFTLKEVIHGYVIKLGFADEKYVQNALMDLYSRMGKINISKYIFDNMESKDIVSWNTMI 475

Query: 1357 TGCIICGCYSQAFRLVNQMQKNGNFIEGIDKESLHYKPNYITLMTLLPACGSLAALGKGQ 1536
            TG ++CG +  A  ++++MQ      +  +      KPN ITL+T+LP C SL AL KG+
Sbjct: 476  TGFVVCGYHEDALIMLHEMQTTKRHNDSENNVEFRLKPNSITLITVLPGCASLVALAKGK 535

Query: 1537 EIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHG 1716
            EIH YAIR  L  DIAVGSALVDMYAKCG L+ AR VF+ M  +NV+TWNVLIMAYGMHG
Sbjct: 536  EIHAYAIRNALAMDIAVGSALVDMYAKCGCLDIARRVFNSMTTKNVITWNVLIMAYGMHG 595

Query: 1717 QGEEAIGLFELMIAKGEAKPSSVTIIAALAACSHSGMVSRGMKLFHTIKEC-GVEANADH 1893
            +GEEA+ LF +M+ + + KP++VT IA  A CSHSGMV +G +LF  +K   G+E  ADH
Sbjct: 596  KGEEALQLFRMMVLERKVKPNNVTFIAIFAGCSHSGMVDQGRELFREMKNAYGIEPTADH 655

Query: 1894 YACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEVAAKHLFEL 2073
            YAC+VDLLGR+G L+EAYQL+  M ++ +K GAWSSLLGACRIH N ELGE++A++LFEL
Sbjct: 656  YACIVDLLGRSGHLEEAYQLVNEMPSKYNKIGAWSSLLGACRIHGNIELGEISARNLFEL 715

Query: 2074 EPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVHRFTAGDSS 2253
            +P  +SHYVLLSNIY++ G ++KA  VR+NMK  GVRKE GCSWIE GD+VH+F AGD+S
Sbjct: 716  DPHVASHYVLLSNIYSSAGIWEKANMVRRNMKKVGVRKEPGCSWIEFGDEVHKFVAGDAS 775

Query: 2254 HKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAISFGILNTP 2433
            H QS ++Y YLE+L ++MKKEGYVPD SCVLH+V E EKE LLCGHSEKLAI+FGILNTP
Sbjct: 776  HPQSEQLYGYLETLSEKMKKEGYVPDTSCVLHNVNEDEKENLLCGHSEKLAIAFGILNTP 835

Query: 2434 PGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGDYW 2595
            PG+ IR+AKNLRVCNDCHE+SK+IS +V R+II+RD RRFHHF++G+CSCGDYW
Sbjct: 836  PGTPIRIAKNLRVCNDCHEASKYISNIVNREIIVRDVRRFHHFRNGACSCGDYW 889


>ref|NP_191302.2| protein ORGANELLE TRANSCRIPT PROCESSING 84 [Arabidopsis thaliana]
            gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g57430, chloroplastic; Flags: Precursor
            gi|332646133|gb|AEE79654.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  942 bits (2434), Expect = 0.0
 Identities = 472/833 (56%), Positives = 601/833 (72%), Gaps = 3/833 (0%)
 Frame = +1

Query: 106  WLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAASV 285
            W++ LRS  R+N    A+ TYVDM   G+ PD+                 +G+Q+HA   
Sbjct: 65   WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 286  KRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXXX 465
            K GY    VTVANTLVN+Y +CGD  +  KVFDRI ER++VSWNS I             
Sbjct: 125  KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 466  XXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAFN 645
              FR + +E                CSNL    G+ +GKQ+H Y LR     S   F  N
Sbjct: 185  EAFRCMLDENVEPSSFTLVSVVTA-CSNLPMPEGLMMGKQVHAYGLRKGELNS---FIIN 240

Query: 646  ALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKP 825
             L+AMY KLG++  +  L   F  RD+VTWNT++SSL QN++  EA+  L EMVL G++P
Sbjct: 241  TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300

Query: 826  DGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAV 1005
            D  T+SS LP+CS +EML  GKE+HAYA +N  L  N+FV SALVDMYCN   V   R V
Sbjct: 301  DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360

Query: 1006 FDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDME-TAGLVPNETTLASILPACVRSEA 1182
            FD + +R++GLWNAMI+GY+QN  D EAL LFI ME +AGL+ N TT+A ++PACVRS A
Sbjct: 361  FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420

Query: 1183 FPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITG 1362
            F  KE IH +V+KRG++ D+FVQN LMDMYSR+GKIDI+ +IF  MEDRD+V+WNT+ITG
Sbjct: 421  FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480

Query: 1363 CIICGCYSQAFRLVNQMQKNGNFI-EGIDKESLHYKPNYITLMTLLPACGSLAALGKGQE 1539
             +    +  A  L+++MQ     + +G  + SL  KPN ITLMT+LP+C +L+AL KG+E
Sbjct: 481  YVFSEHHEDALLLLHKMQNLERKVSKGASRVSL--KPNSITLMTILPSCAALSALAKGKE 538

Query: 1540 IHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQ 1719
            IH YAI+  L +D+AVGSALVDMYAKCG L  +R VFD++P++NV+TWNV+IMAYGMHG 
Sbjct: 539  IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598

Query: 1720 GEEAIGLFELMIAKGEAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK-ECGVEANADHY 1896
            G+EAI L  +M+ +G  KP+ VT I+  AACSHSGMV  G+++F+ +K + GVE ++DHY
Sbjct: 599  GQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 657

Query: 1897 ACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEVAAKHLFELE 2076
            ACVVDLLGRAG + EAYQL+  M  + +KAGAWSSLLGA RIH N E+GE+AA++L +LE
Sbjct: 658  ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 717

Query: 2077 PEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVHRFTAGDSSH 2256
            P  +SHYVLL+NIY++ G +DKA EVR+NMK +GVRKE GCSWIE GD+VH+F AGDSSH
Sbjct: 718  PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSH 777

Query: 2257 KQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAISFGILNTPP 2436
             QS ++  YLE+LW+RM+KEGYVPD SCVLH+VEE EKE+LLCGHSEKLAI+FGILNT P
Sbjct: 778  PQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP 837

Query: 2437 GSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGDYW 2595
            G+ IRVAKNLRVCNDCH ++KFISK+V R+IILRD RRFH FK+G+CSCGDYW
Sbjct: 838  GTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890


>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  942 bits (2434), Expect = 0.0
 Identities = 472/833 (56%), Positives = 601/833 (72%), Gaps = 3/833 (0%)
 Frame = +1

Query: 106  WLETLRSHARANSFHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAASV 285
            W++ LRS  R+N    A+ TYVDM   G+ PD+                 +G+Q+HA   
Sbjct: 65   WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 286  KRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXXX 465
            K GY    VTVANTLVN+Y +CGD  +  KVFDRI ER++VSWNS I             
Sbjct: 125  KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 466  XXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAFN 645
              FR + +E                CSNL    G+ +GKQ+H Y LR     S   F  N
Sbjct: 185  EAFRCMLDENVEPSSFTLVSVVTA-CSNLPMPEGLMMGKQVHAYGLRKGELNS---FIIN 240

Query: 646  ALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKP 825
             L+AMY KLG++  +  L   F  RD+VTWNT++SSL QN++  EA+  L EMVL G++P
Sbjct: 241  TLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300

Query: 826  DGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAV 1005
            D  T+SS LP+CS +EML  GKE+HAYA +N  L  N+FV SALVDMYCN   V   R V
Sbjct: 301  DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360

Query: 1006 FDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDME-TAGLVPNETTLASILPACVRSEA 1182
            FD + +R++GLWNAMI+GY+QN  D EAL LFI ME +AGL+ N TT+A ++PACVRS A
Sbjct: 361  FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420

Query: 1183 FPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITG 1362
            F  KE IH +V+KRG++ D+FVQN LMDMYSR+GKIDI+ +IF  MEDRD+V+WNT+ITG
Sbjct: 421  FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480

Query: 1363 CIICGCYSQAFRLVNQMQKNGNFI-EGIDKESLHYKPNYITLMTLLPACGSLAALGKGQE 1539
             +    +  A  L+++MQ     + +G  + SL  KPN ITLMT+LP+C +L+AL KG+E
Sbjct: 481  YVFSEHHEDALLLLHKMQNLERKVSKGASRVSL--KPNSITLMTILPSCAALSALAKGKE 538

Query: 1540 IHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQ 1719
            IH YAI+  L +D+AVGSALVDMYAKCG L  +R VFD++P++NV+TWNV+IMAYGMHG 
Sbjct: 539  IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598

Query: 1720 GEEAIGLFELMIAKGEAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK-ECGVEANADHY 1896
            G+EAI L  +M+ +G  KP+ VT I+  AACSHSGMV  G+++F+ +K + GVE ++DHY
Sbjct: 599  GQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 657

Query: 1897 ACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGEVAAKHLFELE 2076
            ACVVDLLGRAG + EAYQL+  M  + +KAGAWSSLLGA RIH N E+GE+AA++L +LE
Sbjct: 658  ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 717

Query: 2077 PEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDVHRFTAGDSSH 2256
            P  +SHYVLL+NIY++ G +DKA EVR+NMK +GVRKE GCSWIE GD+VH+F AGDSSH
Sbjct: 718  PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSH 777

Query: 2257 KQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLAISFGILNTPP 2436
             QS ++  YLE+LW+RM+KEGYVPD SCVLH+VEE EKE+LLCGHSEKLAI+FGILNT P
Sbjct: 778  PQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSP 837

Query: 2437 GSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCGDYW 2595
            G+ IRVAKNLRVCNDCH ++KFISK+V R+IILRD RRFH FK+G+CSCGDYW
Sbjct: 838  GTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890


>emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  918 bits (2372), Expect = 0.0
 Identities = 461/810 (56%), Positives = 586/810 (72%), Gaps = 3/810 (0%)
 Frame = +1

Query: 175  MTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAASVKRGYHTSPVTVANTLVNMYARCG 354
            M   G+ PD+                 +G+Q+HA   K GY    VTVANTLVN+Y +CG
Sbjct: 1    MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 355  DLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXXXXXFRSIQEEEXXXXXXXXXXXXX 534
            D  +  KVFDRI ER++VSWNS I               FR + +E              
Sbjct: 61   DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 535  XXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAFNALLAMYAKLGRVDDAVALFERFD 714
              CSNL    G+ +GKQ+H Y LR     S   F  N L+AMY KLG++  +  L   F 
Sbjct: 121  A-CSNLPMPEGLMMGKQVHAYGLRKGELNS---FIINTLVAMYGKLGKLASSKVLLGSFG 176

Query: 715  DRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIKPDGVTLSSALPSCSFMEMLNAGKE 894
             RD+VTWNT++SSL QN++  EA+  L EMVL G++PD  T+SS LP+CS +EML  GKE
Sbjct: 177  GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 236

Query: 895  IHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARAVFDKIPERRLGLWNAMISGYAQNM 1074
            +HAYA +N  L  N+FV SALVDMYCN   V   R VFD + +R++GLWNAMI+GY+QN 
Sbjct: 237  LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 296

Query: 1075 LDDEALKLFIDME-TAGLVPNETTLASILPACVRSEAFPNKEDIHSYVIKRGMEGDKFVQ 1251
             D EAL LFI ME +AGL+ N TT+A ++PACVRS AF  KE IH +V+KRG++ D+FVQ
Sbjct: 297  HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 356

Query: 1252 NALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLITGCIICGCYSQAFRLVNQMQKNGNF 1431
            N LMDMYSR+GKIDI+ +IF  MEDRD+V+WNT+ITG +    +  A  L+++MQ     
Sbjct: 357  NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 416

Query: 1432 I-EGIDKESLHYKPNYITLMTLLPACGSLAALGKGQEIHGYAIRQGLDSDIAVGSALVDM 1608
            + +G  + SL  KPN ITLMT+LP+C +L+AL KG+EIH YAI+  L +D+AVGSALVDM
Sbjct: 417  VSKGASRVSL--KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDM 474

Query: 1609 YAKCGSLNFARLVFDRMPKRNVVTWNVLIMAYGMHGQGEEAIGLFELMIAKGEAKPSSVT 1788
            YAKCG L  +R VFD++P++NV+TWNV+IMAYGMHG G+EAI L  +M+ +G  KP+ VT
Sbjct: 475  YAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG-VKPNEVT 533

Query: 1789 IIAALAACSHSGMVSRGMKLFHTIK-ECGVEANADHYACVVDLLGRAGELDEAYQLIVSM 1965
             I+  AACSHSGMV  G+++F+ +K + GVE ++DHYACVVDLLGRAG + EAYQL+  M
Sbjct: 534  FISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 593

Query: 1966 DNELDKAGAWSSLLGACRIHLNTELGEVAAKHLFELEPEDSSHYVLLSNIYAACGQFDKA 2145
              + +KAGAWSSLLGA RIH N E+GE+AA++L +LEP  +SHYVLL+NIY++ G +DKA
Sbjct: 594  PRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKA 653

Query: 2146 MEVRKNMKLKGVRKETGCSWIEVGDDVHRFTAGDSSHKQSAEIYSYLESLWDRMKKEGYV 2325
             EVR+NMK +GVRKE GCSWIE GD+VH+F AGDSSH QS ++  YLE+LW+RM+KEGYV
Sbjct: 654  TEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYV 713

Query: 2326 PDLSCVLHDVEEHEKEVLLCGHSEKLAISFGILNTPPGSTIRVAKNLRVCNDCHESSKFI 2505
            PD SCVLH+VEE EKE+LLCGHSEKLAI+FGILNT PG+ IRVAKNLRVCNDCH ++KFI
Sbjct: 714  PDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFI 773

Query: 2506 SKLVGRQIILRDTRRFHHFKDGSCSCGDYW 2595
            SK+V R+IILRD RRFH FK+G+CSCGDYW
Sbjct: 774  SKIVDREIILRDVRRFHRFKNGTCSCGDYW 803


>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 874

 Score =  891 bits (2303), Expect = 0.0
 Identities = 454/843 (53%), Positives = 590/843 (69%), Gaps = 13/843 (1%)
 Frame = +1

Query: 106  WLETLRSHARANS-FHSALATYVDMTSAGVPPDHXXXXXXXXXXXXXXXXSVGRQLHAAS 282
            W+  LRS  +++S FH A++TY +M +AGVPPD+                ++G+QLHA  
Sbjct: 52   WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111

Query: 283  VKRGYHTSPVTVANTLVNMYARCGDLDSALKVFDRIPERDEVSWNSTIXXXXXXXXXXXX 462
             K G    P  V N+LVNMY +CGD+D+A +VFD I  RD+VSWNS I            
Sbjct: 112  FKFG-QALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELA 170

Query: 463  XXXFRSIQEEEXXXXXXXXXXXXXXXCSNLDQGIGIRLGKQLHGYALRNQSFYSGKRFAF 642
               FR +   E               CSNL  G+   LGKQ+H + LRN  +   + F  
Sbjct: 171  VHLFR-LMLLENVGPTSFTLVSVAHACSNLINGL--LLGKQVHAFVLRNGDW---RTFTN 224

Query: 643  NALLAMYAKLGRVDDAVALFERFDDRDIVTWNTMISSLTQNDRFSEAIAVLHEMVLAGIK 822
            NAL+ MYAKLGRV +A  LF+ FDD+D+V+WNT+ISSL+QNDRF EA+  LH M+ +G++
Sbjct: 225  NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVR 284

Query: 823  PDGVTLSSALPSCSFMEMLNAGKEIHAYAFRNSGLFLNTFVASALVDMYCNFGLVERARA 1002
            P+GVTL+S LP+CS +EML  GKEIHA+   N+ L  N+FV  ALVDMYCN    E+ R 
Sbjct: 285  PNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRL 344

Query: 1003 VFDKIPERRLGLWNAMISGYAQNMLDDEALKLFIDME-TAGLVPNETTLASILPACVRSE 1179
            VFD +  R + +WNAMI+GY +N  D EA++LF++M    GL PN  TL+S+LPACVR E
Sbjct: 345  VFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCE 404

Query: 1180 AFPNKEDIHSYVIKRGMEGDKFVQNALMDMYSRVGKIDISQKIFAAMEDRDVVSWNTLIT 1359
            +F +KE IHS V+K G E DK+VQNALMDMYSR+G+I+I++ IF +M  +D+VSWNT+IT
Sbjct: 405  SFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMIT 464

Query: 1360 GCIICGCYSQAFRLVNQMQKN------GNFIEGIDKESLHYKPNYITLMTLLPACGSLAA 1521
            G ++CG +  A  L++ MQ+         F +  D ++   KPN +TLMT+LP C +LAA
Sbjct: 465  GYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAA 524

Query: 1522 LGKGQEIHGYAIRQGLDSDIAVGSALVDMYAKCGSLNFARLVFDRMPKRNVVTWNVLIMA 1701
            LGKG+EIH YA++Q L  D+AVGSALVDMYAKCG LN +R VF++M  RNV+TWNVLIMA
Sbjct: 525  LGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMA 584

Query: 1702 YGMHGQGEEAIGLFELMIAKG----EAKPSSVTIIAALAACSHSGMVSRGMKLFHTIK-E 1866
            YGMHG+GEEA+ LF  M+ +G    E +P+ VT IA  A+ SHSGMV  G+ LF+T+K +
Sbjct: 585  YGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAK 644

Query: 1867 CGVEANADHYACVVDLLGRAGELDEAYQLIVSMDNELDKAGAWSSLLGACRIHLNTELGE 2046
             G+E  +DHYAC+VDLLGR+G+++EAY LI +M + + K  AWSSLLGAC+IH N E+GE
Sbjct: 645  HGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGE 704

Query: 2047 VAAKHLFELEPEDSSHYVLLSNIYAACGQFDKAMEVRKNMKLKGVRKETGCSWIEVGDDV 2226
            +AAK+LF L+P    +               K   + + MK KGVRKE GCSWIE GD+V
Sbjct: 705  IAAKNLFVLDPNVLDYGT-------------KQSMLGRKMKEKGVRKEPGCSWIEHGDEV 751

Query: 2227 HRFTAGDSSHKQSAEIYSYLESLWDRMKKEGYVPDLSCVLHDVEEHEKEVLLCGHSEKLA 2406
            H+F AGD SH QS E++ YLE+L  RMKKEGYVPD SCVLH+V E EKE +LCGHSE+LA
Sbjct: 752  HKFLAGDVSHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLA 811

Query: 2407 ISFGILNTPPGSTIRVAKNLRVCNDCHESSKFISKLVGRQIILRDTRRFHHFKDGSCSCG 2586
            I+FG+LNT PG+TIRVAKNLRVCNDCH ++KFISK+V R+IILRD RRFHHF++G+CSCG
Sbjct: 812  IAFGLLNTSPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCG 871

Query: 2587 DYW 2595
            DYW
Sbjct: 872  DYW 874