BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00009889
         (878 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006837084.1| hypothetical protein AMTR_s00110p00099550 [A...   204   3e-50
ref|XP_006849644.1| hypothetical protein AMTR_s00024p00225420 [A...   168   3e-39
ref|XP_006847522.1| hypothetical protein AMTR_s00014p00090010 [A...   165   2e-38
gb|AEP33771.1| organelle transcript processing 82, partial [Thla...   163   9e-38
gb|AEP33763.1| organelle transcript processing 82, partial [Isat...   161   3e-37
ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutr...   159   1e-36
gb|AEP33762.1| organelle transcript processing 82, partial [Hesp...   159   1e-36
gb|AEP33767.1| organelle transcript processing 82, partial [Matt...   159   2e-36
ref|XP_004304908.1| PREDICTED: pentatricopeptide repeat-containi...   158   2e-36
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   158   2e-36
gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis]     156   8e-36
ref|XP_006601386.1| PREDICTED: pentatricopeptide repeat-containi...   156   8e-36
gb|EOY09680.1| Pentatricopeptide repeat (PPR) superfamily protei...   156   8e-36
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps...   156   8e-36
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu...   156   1e-35
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc...   156   1e-35
ref|XP_006601200.1| PREDICTED: pentatricopeptide repeat-containi...   155   1e-35
gb|AEP33772.1| organelle transcript processing 82, partial [Drab...   155   1e-35
gb|AEP33766.1| organelle transcript processing 82, partial [Lepi...   155   1e-35
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ...   155   1e-35

>ref|XP_006837084.1| hypothetical protein AMTR_s00110p00099550 [Amborella trichopoda]
            gi|548839677|gb|ERM99937.1| hypothetical protein
            AMTR_s00110p00099550 [Amborella trichopoda]
          Length = 683

 Score =  204 bits (519), Expect = 3e-50
 Identities = 102/224 (45%), Positives = 146/224 (65%)
 Frame = -1

Query: 869  IFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSSLLN 690
            +F ++   N + W +MI+G A N +  EA+ +F  M +  +  D V+LS  +++C+S L 
Sbjct: 436  VFDAIYEKNLVSWNAMINGYAQNEMGLEALELFCQMRALRVEIDRVTLSSALNACTSSLA 495

Query: 689  LHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTALVSG 510
            L +G Q++   +K G+  DVVVGT+LIDMYGKC ++D A  AF+ I  H++FSWTAL+  
Sbjct: 496  LSMGNQINGVIHKAGYVHDVVVGTSLIDMYGKCRDMDHALCAFSTITQHSVFSWTALLGS 555

Query: 509  YMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDLRIF 330
            Y+  GM E+A +LFE MP+ NIVSWN MLSG+A++G   E ++LYS M +SG LPD    
Sbjct: 556  YVKCGMWESANELFEKMPEKNIVSWNTMLSGHAQNGSGFEAIKLYSLMLKSGELPDGISL 615

Query: 329  ASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQK 198
              LLAVC    L E GKQVH+  IK GY++N  +   + +MY K
Sbjct: 616  ICLLAVCSNHILEEQGKQVHSHAIKTGYYMNLSVKSVIINMYHK 659



 Score =  134 bits (336), Expect = 6e-29
 Identities = 73/231 (31%), Positives = 120/231 (51%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  + H + + + +MI+          A+ +F  M  SG   D+ ++S VI +C +
Sbjct: 69  ARNLFDKMPHRDSVSYNTMIACYDKYGPCENALEVFRAMKLSGSKVDHFTVSSVISACMN 128

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           +  L  G Q+H+   K+G   +V VG+AL++ YGKC +ID A + F  +    +FSW  +
Sbjct: 129 ISFLCQGRQVHSDVIKIGIGLNVYVGSALVEFYGKCGDIDEARKVFESMPDREVFSWNTM 188

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           + GY+  G  E     FE +P  N+VSW  ++SG  + G+  + +  +S +  + L PDL
Sbjct: 189 LLGYVQSGRIEDGILFFEEIPCKNVVSWTTIISGCVRCGWRDKAIHFFSGLRLANLKPDL 248

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
             F S++        +E G++VH  IIK G+  N  +   L  MY K G L
Sbjct: 249 VGFVSIVNAFSALYCLEEGQKVHGLIIKAGFESNLVVGNALVDMYAKCGSL 299



 Score =  128 bits (322), Expect = 2e-27
 Identities = 73/227 (32%), Positives = 122/227 (53%)
 Frame = -1

Query: 875 VRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSSL 696
           +  F  +   N + WT++ISG       ++AIH FS +  + + PD V    ++++ S+L
Sbjct: 202 ILFFEEIPCKNVVSWTTIISGCVRCGWRDKAIHFFSGLRLANLKPDLVGFVSIVNAFSAL 261

Query: 695 LNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTALV 516
             L  G ++H    K GFES++VVG AL+DMY KC ++D ASR F  ++  + +S + L+
Sbjct: 262 YCLEEGQKVHGLIIKAGFESNLVVGNALVDMYAKCGSLDCASRVFEIMHYMDEYSCSVLI 321

Query: 515 SGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDLR 336
           S Y   G+ + A + FE     +I SWN +++GY++     E ++++  M   G+  D  
Sbjct: 322 SEYAKYGLIDYACEFFESSKVKDISSWNALIAGYSELERDWEAIEIFRAMRMEGVKADEF 381

Query: 335 IFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKF 195
            + SL+  C    L   G Q+H+Q IK G   +  +   L  MY +F
Sbjct: 382 TYGSLIRGCYLYGL-RYGMQLHSQTIKIGIDSSVYVGSSLIDMYTEF 427



 Score =  105 bits (263), Expect = 2e-20
 Identities = 54/177 (30%), Positives = 90/177 (50%)
 Frame = -1

Query: 680 GTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTALVSGYMS 501
           G QLHA     GF+ D+ +   L++MY KC  +D     F ++   N+ SW  +++ Y  
Sbjct: 3   GKQLHAHVIVSGFQPDLYLSNHLMNMYSKCGCLDHIESVFREMGRKNLHSWNTMLACYSK 62

Query: 500 LGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDLRIFASL 321
           LG    A+ LF+ MP  + VS+N M++ Y K+G     L+++  M  SG   D    +S+
Sbjct: 63  LGFISDARNLFDKMPHRDSVSYNTMIACYDKYGPCENALEVFRAMKLSGSKVDHFTVSSV 122

Query: 320 LAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSENEFTSSSFD 150
           ++ C+    +  G+QVH+ +IK G  +N  +   L   Y K G++    +   S  D
Sbjct: 123 ISACMNISFLCQGRQVHSDVIKIGIGLNVYVGSALVEFYGKCGDIDEARKVFESMPD 179



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 65/227 (28%), Positives = 100/227 (44%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A   F S K  +   W ++I+G +      EAI +F  M   G+  D  +   +I  C  
Sbjct: 333 ACEFFESSKVKDISSWNALIAGYSELERDWEAIEIFRAMRMEGVKADEFTYGSLIRGCY- 391

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L  L  G QLH+   K+G +S V VG++LIDMY + +                       
Sbjct: 392 LYGLRYGMQLHSQTIKIGIDSSVYVGSSLIDMYTEFF----------------------- 428

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
              Y   G     + +F+ + + N+VSWN M++GYA++    E L+L+ QM    +  D 
Sbjct: 429 ---YCQAG-----RMVFDAIYEKNLVSWNAMINGYAQNEMGLEALELFCQMRALRVEIDR 480

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQK 198
              +S L  C  S  +  G Q++  I K GY  +  +   L  MY K
Sbjct: 481 VTLSSALNACTSSLALSMGNQINGVIHKAGYVHDVVVGTSLIDMYGK 527



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  +   N + W +M+SG A N    EAI ++S+M  SG LPD +SL  ++  CS+
Sbjct: 565 ANELFEKMPEKNIVSWNTMLSGHAQNGSGFEAIKLYSLMLKSGELPDGISLICLLAVCSN 624

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWN-----IDPASRAFADINMHNI 537
            +    G Q+H+ A K G+  ++ V + +I+MY K WN     ++ + +A    NM N+
Sbjct: 625 HILEEQGKQVHSHAIKTGYYMNLSVKSVIINMYHKLWNPNKSVLEVSEQAAISCNMLNV 683


>ref|XP_006849644.1| hypothetical protein AMTR_s00024p00225420 [Amborella trichopoda]
           gi|548853219|gb|ERN11225.1| hypothetical protein
           AMTR_s00024p00225420 [Amborella trichopoda]
          Length = 784

 Score =  168 bits (425), Expect = 3e-39
 Identities = 82/233 (35%), Positives = 136/233 (58%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F ++   N + W++MI+  + N   +EA+ ++  M S G+ P+  + S ++   +S
Sbjct: 286 ARKLFDAMPERNEVSWSAMIARYSQNGEADEALKLYGHMVSEGLRPNLSTFSSILSVSAS 345

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L +L +G ++H +  KLGF+S+V +G+ LIDMY KC     A   F  I   N  SW ++
Sbjct: 346 LEDLKLGKKIHGYVLKLGFDSNVFIGSPLIDMYAKCGKTKEAKMVFEMIPEKNTVSWNSM 405

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++G    G+ E A +LFE MP+ N+VSWN ++SGY ++    + L+LYS M  SG LP+ 
Sbjct: 406 IAGLSHNGLVEEALQLFEQMPERNVVSWNAIISGYVQNELCEQGLELYSVMETSGELPNQ 465

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGS 180
             F+S+L  C     +E G+ +H +I+K G   +  +   LT MY K G++ S
Sbjct: 466 STFSSVLRACASIASLERGRNIHGKIVKFGVQYDVFMGTALTDMYAKSGDIES 518



 Score =  125 bits (315), Expect = 2e-26
 Identities = 71/230 (30%), Positives = 125/230 (54%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A   F  +   + + +T++ISG   N L   A+ +F  M    +LP++V+   +I  C  
Sbjct: 154 ACEYFHRIPTQSVVSFTAIISGYVQNGLHIAALKIFREMYRYEVLPNDVTFICIIRGCVC 213

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L     G  +     +LGF+S + V  ++I +  +  +++ A R F  +   ++ SWTA+
Sbjct: 214 LRWFREGKCVMGQIVRLGFQSYLPVSNSIITLLVRMGDMELARRVFDGMAEKDVVSWTAI 273

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           +  Y+  G    A+KLF+ MP+ N VSW+ M++ Y+++G + E L+LY  M   GL P+L
Sbjct: 274 LDLYVEKGEFAEARKLFDAMPERNEVSWSAMIARYSQNGEADEALKLYGHMVSEGLRPNL 333

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGE 189
             F+S+L+V    + ++ GK++H  ++K G+  N  I   L  MY K G+
Sbjct: 334 STFSSILSVSASLEDLKLGKKIHGYVLKLGFDSNVFIGSPLIDMYAKCGK 383



 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 37/267 (13%)
 Frame = -1

Query: 878  AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
            A+++F  +   N + W ++ISG   N L  + + ++SVM +SG LP+  + S V+ +C+S
Sbjct: 418  ALQLFEQMPERNVVSWNAIISGYVQNELCEQGLELYSVMETSGELPNQSTFSSVLRACAS 477

Query: 698  LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
            + +L  G  +H    K G + DV +GTAL DMY K  +I+ A   F  +   N  S+TA+
Sbjct: 478  IASLERGRNIHGKIVKFGVQYDVFMGTALTDMYAKSGDIESAKLVFHRMPEKNEISFTAM 537

Query: 518  VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGY------------AKHGF-------- 399
            + G    G  E A  LFE M + +I    +   G              KH F        
Sbjct: 538  IQGLADNGFGEEALILFEKMEESDIAPTELTFLGVLFACAHCGMVNRGKHYFDQMQSKYH 597

Query: 398  ----SSEVLQLYSQMSRSGLLPDLRIF-------------ASLLAVCIESKLVENGKQVH 270
                      +   ++R+GLL +   F             ASLL+ C   K  E G++V 
Sbjct: 598  IKPKGKHYTSMVDLLARAGLLQEAENFLSDIPFDAEANSWASLLSACKTYKDHEMGERVA 657

Query: 269  AQIIKNGYHVNAQIDLYLTHMYQKFGE 189
             ++ +   + +A   L L+++Y   G+
Sbjct: 658  GKLWELEQNNSAGYVL-LSNIYASVGQ 683



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
 Frame = -1

Query: 731 SLSIVIDSCSSLLNLHV-------GTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPA 573
           S +   ++C+SLLN          G  +HA   KLGF S   +   L+ MY +C +   A
Sbjct: 31  SFNAYSNACASLLNACATNASTKHGKVIHAHLTKLGFLSHRFLSLKLLIMYVRCNSFHDA 90

Query: 572 SRAFADI--NMHNIFSWTALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIM--------- 426
           +  F ++     ++ +   ++S Y  +G+ + AK+LF+ MP+ NIVSW  +         
Sbjct: 91  NSLFNEMGDRSSDLIASNCMISAYSQMGLSDQAKRLFDKMPERNIVSWTALITCLMQCGK 150

Query: 425 ----------------------LSGYAKHGFSSEVLQLYSQMSRSGLLPDLRIFASLLAV 312
                                 +SGY ++G     L+++ +M R  +LP+   F  ++  
Sbjct: 151 VHDACEYFHRIPTQSVVSFTAIISGYVQNGLHIAALKIFREMYRYEVLPNDVTFICIIRG 210

Query: 311 CIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
           C+  +    GK V  QI++ G+     +   +  +  + G++
Sbjct: 211 CVCLRWFREGKCVMGQIVRLGFQSYLPVSNSIITLLVRMGDM 252


>ref|XP_006847522.1| hypothetical protein AMTR_s00014p00090010 [Amborella trichopoda]
           gi|548850756|gb|ERN09103.1| hypothetical protein
           AMTR_s00014p00090010 [Amborella trichopoda]
          Length = 845

 Score =  165 bits (417), Expect = 2e-38
 Identities = 87/250 (34%), Positives = 138/250 (55%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A + F  +   N   W +MIS  + N   +E + +F  + +S + PD  ++S V+   ++
Sbjct: 83  AQKTFDGITERNIKCWNAMISAYSLNQNYHEGLALFRELQASRLDPDEFTVSNVLTISAN 142

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L  L  G Q+H F  K GF  DV V  +LI+MY KC  +D A R F  I   +++SWTA+
Sbjct: 143 LNALEEGKQIHGFIVKKGFVLDVTVSNSLINMYSKCACMDDAERVFEAITQRDVYSWTAM 202

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           VSGY   G  E A KLF  MPQ N+VSWN M+ GY + G +   L  + +M +    P+ 
Sbjct: 203 VSGYAQNGKTEAAMKLFNEMPQRNVVSWNAMIGGYQQEGDNISALAKFVKMLKEREKPNQ 262

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSENEFTSS 159
             F S+L  C   + +E GKQ+ + +IK+G   +A +   +  M+ KFG++ S ++   +
Sbjct: 263 SSFVSVLKACAGLQTIETGKQIQSYLIKSGTEADAHVGTAIIEMHAKFGDIISAHKSFEA 322

Query: 158 SFDSIVTDAV 129
           S  ++V+ +V
Sbjct: 323 SEHNVVSWSV 332



 Score =  133 bits (335), Expect = 8e-29
 Identities = 85/283 (30%), Positives = 133/283 (46%), Gaps = 22/283 (7%)
 Frame = -1

Query: 878  AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
            A  +F  +   N I +  M+S    N L  EA  + S M  +G+ P+  +LS +++SCS 
Sbjct: 346  AASLFQEMPKKNVISYNIMVSAYVQNELKTEAFSLLSDMIKAGVRPNEHTLSSLLNSCSG 405

Query: 698  LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                  G  LH FA K+GFE D+ +G  L+ MYG+   ++ A   F  +  H++ SWTA+
Sbjct: 406  --KNKTGFGLHGFAIKMGFEVDISIGNCLVTMYGEQRCMNNAYMVFQSMPRHDVVSWTAM 463

Query: 518  VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHG--------------------- 402
            VS Y++    E A++ FE MPQ N++SWN M+SGY + G                     
Sbjct: 464  VSAYLTNQRIEEARQTFESMPQQNLISWNTMISGYLQAGKITVDPMSETSITVTYTKDPL 523

Query: 401  -FSSEVLQLYSQMSRSGLLPDLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQID 225
              + + L L+ +M +SG+ PD   +   L  C     +     +HA  I   Y  +  + 
Sbjct: 524  SGAEDALTLFYKMEQSGIRPDNFTYNCALTACAAIGALHQASTIHAITIHRAYDSDKGVT 583

Query: 224  LYLTHMYQKFGELGSENEFTSSSFDSIVTDAVDGSKPDTISKN 96
              L   Y K G L +  +     F+++        +PDTIS N
Sbjct: 584  NALMAAYSKCGSLQNAEQI----FNNL-------EEPDTISWN 615



 Score =  123 bits (308), Expect = 1e-25
 Identities = 72/225 (32%), Positives = 116/225 (51%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+++F  +   N + W +MI G         A+  F  M      P+  S   V+ +C+ 
Sbjct: 215 AMKLFNEMPQRNVVSWNAMIGGYQQEGDNISALAKFVKMLKEREKPNQSSFVSVLKACAG 274

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L  +  G Q+ ++  K G E+D  VGTA+I+M+ K  +I  A ++F + + HN+ SW+ L
Sbjct: 275 LQTIETGKQIQSYLIKSGTEADAHVGTAIIEMHAKFGDIISAHKSF-EASEHNVVSWSVL 333

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           V  Y   G    A  LF+ MP+ N++S+NIM+S Y ++   +E   L S M ++G+ P+ 
Sbjct: 334 VGAYTQNGYITEAASLFQEMPKKNVISYNIMVSAYVQNELKTEAFSLLSDMIKAGVRPNE 393

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMY 204
              +SLL  C  S   + G  +H   IK G+ V+  I   L  MY
Sbjct: 394 HTLSSLLNSC--SGKNKTGFGLHGFAIKMGFEVDISIGNCLVTMY 436



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 54/174 (31%), Positives = 93/174 (53%)
 Frame = -1

Query: 719 VIDSCSSLLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHN 540
           ++ +C+S+ +L  G  LH  A K G  S   + T L+ MY KC ++  AS  F +++  N
Sbjct: 4   LLRACTSIRSLDRGMILHGHAIKAGLNSHTSIETTLVIMYVKCNSLLNASLVFDNMHQRN 63

Query: 539 IFSWTALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSR 360
               +A+++GY      E A+K F+ + + NI  WN M+S Y+ +    E L L+ ++  
Sbjct: 64  PIVNSAMIAGYSKHKRFEDAQKTFDGITERNIKCWNAMISAYSLNQNYHEGLALFRELQA 123

Query: 359 SGLLPDLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQK 198
           S L PD    +++L +      +E GKQ+H  I+K G+ ++  +   L +MY K
Sbjct: 124 SRLDPDEFTVSNVLTISANLNALEEGKQIHGFIVKKGFVLDVTVSNSLINMYSK 177



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 22/242 (9%)
 Frame = -1

Query: 878  AVRIFGSVKHPNHIIWTSMISGLASNNLIN----------------------EAIHMFSV 765
            A + F S+   N I W +MISG      I                       +A+ +F  
Sbjct: 476  ARQTFESMPQQNLISWNTMISGYLQAGKITVDPMSETSITVTYTKDPLSGAEDALTLFYK 535

Query: 764  MTSSGILPDNVSLSIVIDSCSSLLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWN 585
            M  SGI PDN + +  + +C+++  LH  + +HA      ++SD  V  AL+  Y KC +
Sbjct: 536  MEQSGIRPDNFTYNCALTACAAIGALHQASTIHAITIHRAYDSDKGVTNALMAAYSKCGS 595

Query: 584  IDPASRAFADINMHNIFSWTALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKH 405
            +  A + F ++   +  SW  L+                               +GYA++
Sbjct: 596  LQNAEQIFNNLEEPDTISWNTLI-------------------------------TGYAQN 624

Query: 404  GFSSEVLQLYSQMSRSGLLPDLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQID 225
            G  + VL+ +++M +SG+ P+   + S+L+ C     VE G++ + + +   + +N + D
Sbjct: 625  GQGNHVLEFFNEMLKSGIEPNHVTYVSILSACSYIGEVEKGRE-YFESMSRDHGLNPRRD 683

Query: 224  LY 219
             Y
Sbjct: 684  HY 685


>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  163 bits (412), Expect = 9e-38
 Identities = 78/231 (33%), Positives = 141/231 (61%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F +++ PN +IW +M+ G A ++    A+ ++ VM S G+LP++ +   ++ SC+ 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                 G Q+H    KLG+E D+ V T+LI MY +   ++ A + F   +  ++ S+TAL
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++GY S G   +A+++F+ +P  ++VSWN M+SGYA+ G   E L+L+ +M ++ + PD 
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
               ++L+ C +S+ VE G+QVH+ I  +G+  N +I   L  +Y K G++
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQV 249



 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 2/242 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  +   + + W +MISG A      EA+ +F  M  + + PD  ++  V+ +C+ 
Sbjct: 151 AQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQ 210

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             ++ +G Q+H++    GF S++ +  ALID+Y KC                        
Sbjct: 211 SRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC------------------------ 246

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                  G  ETA  LFE +   ++VSWN ++ GY       E L L+ +M RSG  P+ 
Sbjct: 247 -------GQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 299

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVN--AQIDLYLTHMYQKFGELGSENEFT 165
               S+L  C     ++ G+ +H  I K    V     +   L  MY K G++ + ++  
Sbjct: 300 VTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVF 359

Query: 164 SS 159
           +S
Sbjct: 360 NS 361



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  +   + + W ++I G    NL  EA+ +F  M  SG  P++V++  ++ +C+ 
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAH 311

Query: 698 LLNLHVGTQLHAFAYKLGFESDVV----VGTALIDMYGKCWNIDPASRAFADINMHNIFS 531
           L  + +G  +H +  K     DV     + T+LIDMY KC +I                 
Sbjct: 312 LGAIDIGRWIHVYIDKK--LKDVTNAPSLRTSLIDMYAKCGDI----------------- 352

Query: 530 WTALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGL 351
                         E A ++F  M   ++ SWN M+ G+A HG ++    L+S+M ++G+
Sbjct: 353 --------------EAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGI 398

Query: 350 LPDLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY 219
            PD   F  LL+ C  S  ++ G+ +   + ++ Y +  +++ Y
Sbjct: 399 EPDDITFVGLLSACSHSGKLDLGRHIFKSMTQD-YDITPKLEHY 441


>gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  161 bits (408), Expect = 3e-37
 Identities = 79/231 (34%), Positives = 138/231 (59%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F +++ PN +IW +MI G A ++    ++ ++  M S G+LP++ +   ++ SC+ 
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                 G Q+H    KLGF+ D+ V T+LI MY + W ++ A + F   +  ++ S+TAL
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++GY S G   +A+KLF+ +P  ++VSWN M+SGYA+ G   E L+L+ +M +  + PD 
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
             + ++L+ C  S  +E G+QVH+ +  +G+  N +I   L  +Y K GE+
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEV 247



 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 2/242 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W +MISG A      EA+ +F  M    + PD  +   V+ +C+ 
Sbjct: 149 AQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAH 208

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             ++ +G Q+H++    GF+S++ +  ALID+Y KC  +                     
Sbjct: 209 SGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEV--------------------- 247

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                     ETA  LF+ +   +++SWN ++ GY       E L L+ +M RSG  P+ 
Sbjct: 248 ----------ETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 297

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIK--NGYHVNAQIDLYLTHMYQKFGELGSENEFT 165
               S+L  C     ++ G+ +H  I K   G    + +   L  MY K G++ + ++  
Sbjct: 298 VTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 357

Query: 164 SS 159
           +S
Sbjct: 358 NS 359



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 2/222 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  + + + I W ++I G    NL  EA+ +F  M  SG  P++V++  V+ +C+ 
Sbjct: 250 ACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAH 309

Query: 698 LLNLHVGTQLHAFAYKL--GFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWT 525
           L  + +G  +H +  K   G  +   + T+LIDMY KC +I+ A + F  +   ++ SW 
Sbjct: 310 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWN 369

Query: 524 ALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLP 345
           A++                                G+A HG +     L+S+M + G+ P
Sbjct: 370 AMI-------------------------------FGFAMHGRADASFDLFSRMRKIGIEP 398

Query: 344 DLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY 219
           D   F  LL+ C  S +++ G+ +   + ++ Y +  +++ Y
Sbjct: 399 DDITFVGLLSACSHSGMLDLGRHIFRSMTQD-YKMTPKLEHY 439


>ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutrema salsugineum]
           gi|557095503|gb|ESQ36085.1| hypothetical protein
           EUTSA_v10006910mg [Eutrema salsugineum]
          Length = 740

 Score =  159 bits (402), Expect = 1e-36
 Identities = 78/248 (31%), Positives = 144/248 (58%), Gaps = 1/248 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F +++ PN +IW +M+ G A ++    ++ ++  M S G+LP++ +   ++ SC+ 
Sbjct: 86  AISVFETIQEPNQLIWNTMLRGHALSSDPVSSLKLYVSMISLGLLPNSYTFPFLLKSCAK 145

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
              L  G Q+H    K G+  D+ V T+LI MY +   ++ A + F   +  ++ S+TAL
Sbjct: 146 SNTLREGQQIHGHVLKFGYGLDLYVHTSLISMYAQNGRLEDAQQVFDRSSHRDVVSYTAL 205

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++GY S G  ++A+K+F+ +P  ++VSWN M+SGY + G+  E  +L+  M +S + PD 
Sbjct: 206 ITGYASRGYTQSAQKMFDEIPDKDVVSWNAMISGYVETGYYKEAFELFEDMMKSNVSPDE 265

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSE-NEFTS 162
               ++L+ C +S  +E G+QVH+ I  +G+  N +I   L  +Y K GE+ +    F  
Sbjct: 266 STMVTVLSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGEVATACGLFEG 325

Query: 161 SSFDSIVT 138
            S+  +V+
Sbjct: 326 MSYKDVVS 333



 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 2/242 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W +MISG        EA  +F  M  S + PD  ++  V+ +C+ 
Sbjct: 218 AQKMFDEIPDKDVVSWNAMISGYVETGYYKEAFELFEDMMKSNVSPDESTMVTVLSACAQ 277

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             ++ +G Q+H++    GF S++ +  ALID+Y KC  +                     
Sbjct: 278 SGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGEV--------------------- 316

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                      TA  LFE M   ++VSWN ++ GY       E L L+ +M RS   P+ 
Sbjct: 317 ----------ATACGLFEGMSYKDVVSWNTLIGGYTHMSLYKEALLLFQEMLRSNESPND 366

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIK--NGYHVNAQIDLYLTHMYQKFGELGSENEFT 165
               S+L  C     ++ G+ +H  I K   G    + +   L  MY K G++ + ++  
Sbjct: 367 VTMLSILPACAHLGAIDIGRWIHVYIAKKLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 426

Query: 164 SS 159
           +S
Sbjct: 427 NS 428



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 56/238 (23%), Positives = 112/238 (47%), Gaps = 2/238 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  + + + + W ++I G    +L  EA+ +F  M  S   P++V++  ++ +C+ 
Sbjct: 319 ACGLFEGMSYKDVVSWNTLIGGYTHMSLYKEALLLFQEMLRSNESPNDVTMLSILPACAH 378

Query: 698 LLNLHVGTQLHAFAYKL--GFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWT 525
           L  + +G  +H +  K   G  +   + T+LIDMY KC +I+ A + F  +   ++ SW 
Sbjct: 379 LGAIDIGRWIHVYIAKKLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHRSLSSWN 438

Query: 524 ALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLP 345
           A++ G                               +A HG ++    L+S+M ++G+ P
Sbjct: 439 AMIFG-------------------------------FAMHGRANAAFDLFSRMRKNGIEP 467

Query: 344 DLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSENE 171
           D   F  LL+ C  S +++ G+++   + ++ Y++  +++ Y   M    G  G  NE
Sbjct: 468 DGITFVGLLSACSHSGMLDLGRRIFRSMTQD-YNITPKLEHY-GCMIDLLGHSGLFNE 523


>gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  159 bits (402), Expect = 1e-36
 Identities = 79/231 (34%), Positives = 138/231 (59%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F ++  PN +IW  M  G A ++    A+ ++ VM S G+LP+  +   ++ SC+ 
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                 G Q+H    KLGF+ D+ V T+LI MY +   ++ A + F   +  ++ S+TAL
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++GY S G  E+A+K+F+ +P  ++VSWN M+SGYA+ G   + L+L+ +M ++ + PD 
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
              A++++ C +S  +E G+QVH+ I  +G+  N +I   L  +Y K GE+
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEV 258



 Score =  100 bits (248), Expect = 9e-19
 Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 4/245 (1%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W +MISG A      +A+ +F  M  + + PD  +++ V+ +C+ 
Sbjct: 160 AQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQ 219

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             ++ +G Q+H++    GF S++ +  ALID+Y KC  +                     
Sbjct: 220 SGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEV--------------------- 258

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                     ETA +L E +   +++SWN ++ GY       E L L+ +M RSG  P+ 
Sbjct: 259 ----------ETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 308

Query: 338 RIFASLLAVCIESKLVENGKQVHAQI---IKNGYHVNA-QIDLYLTHMYQKFGELGSENE 171
               S+L  C     ++ G+ +H  I   +K     NA  +   L  MY K G++ +  +
Sbjct: 309 VTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQ 368

Query: 170 FTSSS 156
            + SS
Sbjct: 369 VSDSS 373


>gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  159 bits (401), Expect = 2e-36
 Identities = 83/233 (35%), Positives = 142/233 (60%), Gaps = 2/233 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F +++ PN +IW +M  G A ++    A+ ++ VM S G+LPD+ +   ++ SC+ 
Sbjct: 42  AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMH-NIFSWTA 522
                 G Q+H    KLGF+ D+ V T+LI MY +   ++ A + F DI+ H ++ S+TA
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVF-DISSHRDVVSYTA 160

Query: 521 LVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQ-MSRSGLLP 345
           L++GY+S G  E+A+KLF+ +P  ++VSWN M+SGY + G   E L+L+ + M  + + P
Sbjct: 161 LIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRP 220

Query: 344 DLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
           D     ++++ C +S  +E G+ VH+ I  +G+  N +I   L  +Y KFGE+
Sbjct: 221 DESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEV 273



 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 4/248 (1%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFS-VMTSSGILPDNVSLSIVIDSCS 702
           A ++F  +   + + W +MISG        EA+ +F  +M  + + PD  ++  V+ +C+
Sbjct: 174 AQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACA 233

Query: 701 SLLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTA 522
              ++ +G  +H++    GF S++ +  ALID+Y K                        
Sbjct: 234 QSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSK------------------------ 269

Query: 521 LVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPD 342
                   G  ETA +LF+ +   +++SWN ++ GY       E L L+ +M RSG  P+
Sbjct: 270 -------FGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 322

Query: 341 LRIFASLLAVCIESKLVENGKQVHAQIIK--NGYHVN-AQIDLYLTHMYQKFGELGSENE 171
                S+L  C     ++ G+ +H  I K   G   N + +   L  MY K G++ +  +
Sbjct: 323 DVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQ 382

Query: 170 FTSSSFDS 147
              SS  +
Sbjct: 383 VFDSSMSN 390



 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 5/225 (2%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  + + + I W ++I G    NL  EA+ +F  M  SG  P++V++  ++ +C+ 
Sbjct: 276 ACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 335

Query: 698 LLNLHVGTQLHAFAYKL--GFESDVV-VGTALIDMYGKCWNIDPASRAFADINMHN--IF 534
           L  + +G  +H +  K   G  ++V  + T+LIDMY KC +ID A + F D +M N  + 
Sbjct: 336 LGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVF-DSSMSNRSLS 394

Query: 533 SWTALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSG 354
           +W A++S                               G+A HG ++    ++S+M  +G
Sbjct: 395 TWNAMIS-------------------------------GFAMHGRANAAFDIFSRMRMNG 423

Query: 353 LLPDLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY 219
           + PD   F  LL+ C  S +++ G+ +   + + GY +  +++ Y
Sbjct: 424 IEPDDITFVGLLSACSHSGMLDLGRNIFRSMTR-GYEITPKLEHY 467


>ref|XP_004304908.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Fragaria vesca subsp. vesca]
          Length = 777

 Score =  158 bits (400), Expect = 2e-36
 Identities = 81/230 (35%), Positives = 131/230 (56%), Gaps = 1/230 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A R+F  +   + + W+++IS    N +  +A+ MF  M + G++ D V +  V+ +C+ 
Sbjct: 226 ARRLFDDLPQKDMVSWSALISCFEQNEMYEDALEMFVKMVAEGVMVDEVVVVSVLSACAH 285

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAF-ADINMHNIFSWTA 522
           +  +H G  +H    K+G ES V +  A I MY  C  I  A + F A  N+  I SW +
Sbjct: 286 MSGVHTGKLIHGLVVKIGIESYVNLQNAFIHMYSSCGEIIVAEKLFNAAYNLDQI-SWNS 344

Query: 521 LVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPD 342
           ++SGY+  G+ ETA++LF+ MP+ ++VSW+ M+SGYA+H   SE L L+ +M  SG+ PD
Sbjct: 345 MISGYLRCGLVETAQRLFDSMPEKDVVSWSAMISGYAQHDRFSETLALFQEMQLSGIRPD 404

Query: 341 LRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFG 192
                S+++ C     ++ G+ +HA I KN   VN  +   L +MY K G
Sbjct: 405 ETTLVSVISACTHLAALDLGQWIHAYIRKNRLKVNVFLGTTLINMYLKCG 454



 Score =  112 bits (281), Expect = 1e-22
 Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 31/260 (11%)
 Frame = -1

Query: 872 RIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSSLL 693
           R+F  +++PN  IW +M+      +   + + ++ +M       DN +  I++ +C+   
Sbjct: 65  RVFNQIENPNGFIWNTMMKAYIQRSCPQKTLGLYKLMLVKNGDRDNYTYPILVQACALRG 124

Query: 692 NLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTALVS 513
               G Q+H+   K GF SDV V   LI+MY  C N+  A   F ++ + +  +W ++++
Sbjct: 125 AEFEGKQMHSHVLKFGFGSDVYVQNTLINMYAVCENMRDARNVFDEMPVLDSVAWNSILA 184

Query: 512 GYMSL-------------------------------GMHETAKKLFEMMPQHNIVSWNIM 426
           GY+ +                               G    A++LF+ +PQ ++VSW+ +
Sbjct: 185 GYVRVWNVEQAKCIYEKMPVRNTIASNSMIVLFGKRGCVNEARRLFDDLPQKDMVSWSAL 244

Query: 425 LSGYAKHGFSSEVLQLYSQMSRSGLLPDLRIFASLLAVCIESKLVENGKQVHAQIIKNGY 246
           +S + ++    + L+++ +M   G++ D  +  S+L+ C     V  GK +H  ++K G 
Sbjct: 245 ISCFEQNEMYEDALEMFVKMVAEGVMVDEVVVVSVLSACAHMSGVHTGKLIHGLVVKIGI 304

Query: 245 HVNAQIDLYLTHMYQKFGEL 186
                +     HMY   GE+
Sbjct: 305 ESYVNLQNAFIHMYSSCGEI 324



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 7/226 (3%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A R+F S+   + + W++MISG A ++  +E + +F  M  SGI PD  +L  VI +C+ 
Sbjct: 358 AQRLFDSMPEKDVVSWSAMISGYAQHDRFSETLALFQEMQLSGIRPDETTLVSVISACTH 417

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L  L +G  +HA+  K   + +V +GT LI+M                            
Sbjct: 418 LAALDLGQWIHAYIRKNRLKVNVFLGTTLINM---------------------------- 449

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
              Y+  G  E A ++FE   +  + +WN ++ G A +G   + L+++S+M + G+ P+ 
Sbjct: 450 ---YLKCGCVENALEVFEETAEKGVSTWNALILGLAMNGLVEKSLEMFSEMKKCGVAPNE 506

Query: 338 RIFASLLAVCIESKLVENGK-------QVHAQIIKNGYHVNAQIDL 222
             F  ++  C    LV+ G+       Q H +I  N  H    +DL
Sbjct: 507 ITFMGVMGACRHMGLVDEGRRHFDSMMQEH-KIEPNVKHYGCMVDL 551


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  158 bits (400), Expect = 2e-36
 Identities = 89/264 (33%), Positives = 145/264 (54%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F S++ PN  IW SMI GL+ +     A+  F  M  SG+ P++ +   ++ SC+ 
Sbjct: 82  AISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAK 141

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L + H G Q+HA   KLGF SDV + T+LI+MY +   ++ A   F   N  +  S+TAL
Sbjct: 142 LASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTAL 201

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++GY   G  + A++LF+ MP  ++VSWN M++GYA+ G S E L L+  M ++ + P+ 
Sbjct: 202 IAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNE 261

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSENEFTSS 159
               S+L+ C +S  ++ G  + + I   G   N ++   L  MY K G+L +  E    
Sbjct: 262 STIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAREL--- 318

Query: 158 SFDSIVTDAVDGSKPDTISKNIQL 87
            FD ++       + D IS N+ +
Sbjct: 319 -FDDML-------ERDVISWNVMI 334



 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 60/231 (25%), Positives = 107/231 (46%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W +MI+G A      EA+ +F  M  + + P+  ++  V+ +C+ 
Sbjct: 214 ARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQ 273

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
              L +G  + ++    G  S++ +  ALIDMY KC ++                     
Sbjct: 274 SNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDL--------------------- 312

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                     +TA++LF+ M + +++SWN+M+ GY       E L L+ +M  SG+ P  
Sbjct: 313 ----------QTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTE 362

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
             F S+L  C     ++ GK +HA I KN   V+  +   L  +Y K G +
Sbjct: 363 ITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNI 413



 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 6/225 (2%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  +   + I W  MI G        EA+ +F  M +SG+ P  ++   ++ SC+ 
Sbjct: 315 ARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAH 374

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L  + +G  +HA+  K        + T+LID+Y KC NI                     
Sbjct: 375 LGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNI--------------------- 413

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                       A+++F+ M   ++ SWN M+ G A HG + +  +L+S+MS  G+ P+ 
Sbjct: 414 ----------VAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNE 463

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKN------GYHVNAQIDL 222
             F  +L+ C  + LV+ G+Q  + ++++        H    IDL
Sbjct: 464 ITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDL 508


>gb|EXC23679.1| hypothetical protein L484_015589 [Morus notabilis]
          Length = 652

 Score =  156 bits (395), Expect = 8e-36
 Identities = 84/239 (35%), Positives = 132/239 (55%), Gaps = 7/239 (2%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A R+F  ++  N + W S+IS    N   +EAI +F  M  SG+ PD V+L+ V+ +C+S
Sbjct: 150 AQRVFDWMEERNRVSWNSLISCYEQNGPASEAIDVFRRMMDSGVEPDEVTLASVVSACAS 209

Query: 698 LLNLHVGTQLHAFAYKLG-FESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTA 522
           LL +  G Q+H    K   F  D+++G AL+DMY KC  ID A   F  + + N+ S T+
Sbjct: 210 LLAVKEGLQIHGRVMKCEKFRDDLILGNALVDMYAKCGRIDEARWVFDRMPIRNVVSETS 269

Query: 521 LVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPD 342
           ++SGY      + A+ +F  M + N+VSWN ++SGY + G + E L L+  + R  + P 
Sbjct: 270 MISGYAKAAGVKAARLMFTKMTERNVVSWNALISGYTQIGENEEALSLFLLLKRESVWPT 329

Query: 341 LRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNA--QIDLY----LTHMYQKFGELG 183
              F +LL  C     ++ GKQ H  ++K+G+   A  + D++    L  MY K G +G
Sbjct: 330 HYTFGNLLNACANLADLQLGKQAHTHVVKHGFRFQAGEEPDIFVGNSLVDMYMKCGSIG 388



 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A++IF  +   +   W S+++G A +N   +A+     M     + ++ S    + +C+ 
Sbjct: 49  AMQIFEMMPDHDQCTWNSLVAGFAQHNWHGDALECLVKMHGENFMLNDYSFGSALSACAG 108

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L +L +G Q+HA   K  + S+V +G+ALIDMY KC ++  A R F  +   N  SW +L
Sbjct: 109 LKDLRMGIQIHAVISKSRYSSNVYMGSALIDMYSKCGSVTCAQRVFDWMEERNRVSWNSL 168

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           +                               S Y ++G +SE + ++ +M  SG+ PD 
Sbjct: 169 I-------------------------------SCYEQNGPASEAIDVFRRMMDSGVEPDE 197

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIK-NGYHVNAQIDLYLTHMYQKFGEL 186
              AS+++ C     V+ G Q+H +++K   +  +  +   L  MY K G +
Sbjct: 198 VTLASVVSACASLLAVKEGLQIHGRVMKCEKFRDDLILGNALVDMYAKCGRI 249



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 46/143 (32%), Positives = 78/143 (54%)
 Frame = -1

Query: 614 LIDMYGKCWNIDPASRAFADINMHNIFSWTALVSGYMSLGMHETAKKLFEMMPQHNIVSW 435
           LID+YGKC  ++ A + F  ++  N FS  +++   M  G+ + A ++FEMMP H+  +W
Sbjct: 5   LIDVYGKCGCLEDARKVFDRMSERNTFSGNSIICVLMKAGLLDEAMQIFEMMPDHDQCTW 64

Query: 434 NIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDLRIFASLLAVCIESKLVENGKQVHAQIIK 255
           N +++G+A+H +  + L+   +M     + +   F S L+ C   K +  G Q+HA I K
Sbjct: 65  NSLVAGFAQHNWHGDALECLVKMHGENFMLNDYSFGSALSACAGLKDLRMGIQIHAVISK 124

Query: 254 NGYHVNAQIDLYLTHMYQKFGEL 186
           + Y  N  +   L  MY K G +
Sbjct: 125 SRYSSNVYMGSALIDMYSKCGSV 147



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 6/239 (2%)
 Frame = -1

Query: 869 IFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSSLLN 690
           +F  +   N + W ++ISG        EA+ +F ++    + P + +   ++++C++L +
Sbjct: 286 MFTKMTERNVVSWNALISGYTQIGENEEALSLFLLLKRESVWPTHYTFGNLLNACANLAD 345

Query: 689 LHVGTQLHAFAYKLGF------ESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSW 528
           L +G Q H    K GF      E D+ VG +L+DMY KC +I    R F ++   +  SW
Sbjct: 346 LQLGKQAHTHVVKHGFRFQAGEEPDIFVGNSLVDMYMKCGSIGDGCRVFENMAERDHVSW 405

Query: 527 TALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLL 348
            A++                                GYA++G+ +E L ++S+M  SG  
Sbjct: 406 NAMI-------------------------------VGYAQNGYGAEALGIFSRMLASGEQ 434

Query: 347 PDLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSENE 171
           PD      +L  C  + LV  G+     + ++  H    +  + T M    G  G  +E
Sbjct: 435 PDHVTMIGVLCACSHAGLVVQGRHYFRSMTED--HNLVPLKDHYTCMVDLLGRAGHLDE 491


>ref|XP_006601386.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 871

 Score =  156 bits (395), Expect = 8e-36
 Identities = 80/245 (32%), Positives = 136/245 (55%)
 Frame = -1

Query: 878  AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
            A R+F S+   N + WT +ISG+A   L ++A+ +F+ M  + ++ D  +L+ ++  CS 
Sbjct: 328  ARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSG 387

Query: 698  LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                  G  LH +A K G +S V VG A+I MY +C + + AS AF  + + +  SWTA+
Sbjct: 388  QNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAM 447

Query: 518  VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
            ++ +   G  + A++ F+MMP+ N+++WN MLS Y +HGFS E ++LY  M    + PD 
Sbjct: 448  ITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDW 507

Query: 338  RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSENEFTSS 159
              FA+ +  C +   ++ G QV + + K G   +  +   +  MY + G++    +    
Sbjct: 508  VTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKV--- 564

Query: 158  SFDSI 144
             FDSI
Sbjct: 565  -FDSI 568



 Score =  110 bits (274), Expect = 9e-22
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 16/252 (6%)
 Frame = -1

Query: 878 AVRIFGSVKH--PNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILP----DNVSLSIV 717
           A  +F  + H   + + WT+MISG   N L   +I  F  M           D  S +  
Sbjct: 89  AENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTCT 148

Query: 716 IDSCSSLLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNI 537
           + +C  L +     QLHA   KL   +   +  +L+DMY KC  I  A   F +I   ++
Sbjct: 149 MKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSL 208

Query: 536 FSWTALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRS 357
           F W +++ GY  L     A  +F  MP+ + VSWN ++S ++++G     L  + +M   
Sbjct: 209 FCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNL 268

Query: 356 GLLPDLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQK------- 198
           G  P+   + S+L+ C     ++ G  +HA+I++  + ++A +   L  MY K       
Sbjct: 269 GFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALA 328

Query: 197 ---FGELGSENE 171
              F  LG +N+
Sbjct: 329 RRVFNSLGEQNQ 340



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
 Frame = -1

Query: 878  AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
            A + F  +   N I W SM+S    +    E + ++ +M S  + PD V+ +  I +C+ 
Sbjct: 460  ARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACAD 519

Query: 698  LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
            L  + +GTQ+ +   K G  SDV V  +++ MY +C  I  A + F  I++ N+ SW A+
Sbjct: 520  LATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAM 579

Query: 518  VSGYMSLGMHETAKKLFEMM------PQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSR- 360
            ++ +   G+   A + +E M      P H  +S+  +LSG +  G   E    +  M++ 
Sbjct: 580  MAAFAQNGLGNKAIETYEDMLRTECKPDH--ISYVAVLSGCSHMGLVVEGKNYFDSMTQV 637

Query: 359  SGLLPDLRIFASLLAVCIESKLVENGKQV 273
             G+ P    FA ++ +   + L++  K +
Sbjct: 638  FGISPTNEHFACMVDLLGRAGLLDQAKNL 666



 Score = 90.5 bits (223), Expect = 7e-16
 Identities = 55/230 (23%), Positives = 101/230 (43%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F  +   +H+ W ++IS  +        +  F  M + G  P+ ++   V+ +C+S
Sbjct: 227 ALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACAS 286

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           + +L  G  LHA   ++    D  +G+ LIDMY KC                        
Sbjct: 287 ISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKC------------------------ 322

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                  G    A+++F  + + N VSW  ++SG A+ G   + L L++QM ++ ++ D 
Sbjct: 323 -------GCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDE 375

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGE 189
              A++L VC        G+ +H   IK+G      +   +  MY + G+
Sbjct: 376 FTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGD 425



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
 Frame = -1

Query: 683 VGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTALVSGYM 504
           +  +LHA     G ++ + +   L+ MY  C  +D A R F + N  NIF+W  ++  + 
Sbjct: 22  IARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFF 81

Query: 503 SLGMHETAKKLFEMMPQ--HNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLP----D 342
             G    A+ LF+ MP    + VSW  M+SGY ++G  +  ++ +  M R         D
Sbjct: 82  DSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCD 141

Query: 341 LRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQ--IDLYLTHMYQKFGEL 186
              +   +  C          Q+HA +IK   H+ AQ  I   L  MY K G +
Sbjct: 142 PFSYTCTMKACGCLASTRFALQLHAHVIK--LHLGAQTCIQNSLVDMYIKCGAI 193


>gb|EOY09680.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 626

 Score =  156 bits (395), Expect = 8e-36
 Identities = 72/231 (31%), Positives = 134/231 (58%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A +IF  ++ PN  I+ ++I G ++    +++ H ++ +  + ILPDN+S   ++ +C+ 
Sbjct: 75  AFKIFSQIETPNLFIFNALIKGFSACQNPHQSFHFYTQLLRANILPDNLSFPFLVRACAQ 134

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L +L +G Q H    K GFES+V V  +L+ MY  C +I  A+  F  +   N+ SWT++
Sbjct: 135 LESLDMGIQAHGQIIKHGFESNVYVQNSLVHMYSTCGDIKAANAIFQRMTFLNVVSWTSM 194

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++G   +G  E A+KLF+ MP+ N+V+W+IM+SGYAK+ +  + ++L+  +   G+  + 
Sbjct: 195 IAGLNKVGDVEMARKLFDTMPEKNLVTWSIMISGYAKNSYFEKAVELFQVLQEEGVQANE 254

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
            +  S+++ C     +E G++ H  I +N   +N  +   L  MY + G +
Sbjct: 255 TVMVSVISSCAHLGAIELGEKAHEYIFRNNLSLNVILGTALVDMYARCGSI 305



 Score =  106 bits (264), Expect = 1e-20
 Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 2/239 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F ++   N + W+ MISG A N+   +A+ +F V+   G+  +   +  VI SC+ 
Sbjct: 207 ARKLFDTMPEKNLVTWSIMISGYAKNSYFEKAVELFQVLQEEGVQANETVMVSVISSCAH 266

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           L  + +G + H + ++     +V++GTAL+DMY +C +I+ A   F ++   ++ SWTAL
Sbjct: 267 LGAIELGEKAHEYIFRNNLSLNVILGTALVDMYARCGSIEKAIGVFEELPERDVLSWTAL 326

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           +                               +G A HG++   L  +S+M +SGL P  
Sbjct: 327 I-------------------------------AGLAMHGYAERALWFFSEMVKSGLKPRD 355

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY--LTHMYQKFGELGSENEF 168
             F ++L+ C    LV  G ++    +K  + +  +++ Y  +  +  + G+L    +F
Sbjct: 356 ISFTAVLSACSHGGLVGKGLELFGS-MKRDFGIEPRLEHYGCVVDLLGRAGKLAEAEKF 413



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = -1

Query: 482 AKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDLRIFASLLAVCIE 303
           A K+F  +   N+  +N ++ G++      +    Y+Q+ R+ +LPD   F  L+  C +
Sbjct: 75  AFKIFSQIETPNLFIFNALIKGFSACQNPHQSFHFYTQLLRANILPDNLSFPFLVRACAQ 134

Query: 302 SKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSENE-FTSSSFDSIVT 138
            + ++ G Q H QIIK+G+  N  +   L HMY   G++ + N  F   +F ++V+
Sbjct: 135 LESLDMGIQAHGQIIKHGFESNVYVQNSLVHMYSTCGDIKAANAIFQRMTFLNVVS 190


>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
           gi|482575565|gb|EOA39752.1| hypothetical protein
           CARUB_v10008399mg [Capsella rubella]
          Length = 740

 Score =  156 bits (395), Expect = 8e-36
 Identities = 87/273 (31%), Positives = 153/273 (56%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F S++ PN +IW +M  G A ++    A++++  M S G++P++ +   ++ SC+ 
Sbjct: 86  AISVFESIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKSCAK 145

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                 G Q+H    KLG + D+ V T+LI MY K   ++ A + F   +  ++ S+TAL
Sbjct: 146 SRAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRLEDARKVFDQSSHRDVVSYTAL 205

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           + GY S G  E+A+K+F+ +P  ++VSWN ++SGYA+ G   E L+L+ +M ++ + PD 
Sbjct: 206 IKGYASNGYIESAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMQTNVKPDE 265

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSENEFTSS 159
               ++L+ C +S  +E G+QVH+ I  +G+  N +I   L  +Y K GE+    E  S 
Sbjct: 266 STMVTVLSACGQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV----ETASG 321

Query: 158 SFDSIVTDAVDGSKPDTISKNIQLLASAYLNYF 60
            F+ +       S  D IS N  +    ++N +
Sbjct: 322 LFEGL-------SYKDVISWNTLIGGYTHMNLY 347



 Score =  102 bits (253), Expect = 2e-19
 Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 2/282 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W ++ISG A      EA+ +F  M  + + PD  ++  V+ +C  
Sbjct: 218 AQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMQTNVKPDESTMVTVLSACGQ 277

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             ++ +G Q+H++    GF S++ +  ALID+Y KC  +                     
Sbjct: 278 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV--------------------- 316

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                     ETA  LFE +   +++SWN ++ GY       E L L+ +M R G +P+ 
Sbjct: 317 ----------ETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRLGEIPNE 366

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIK--NGYHVNAQIDLYLTHMYQKFGELGSENEFT 165
               S+L  C     ++ G+ +H  I K   G    + +   L  MY K G++    E  
Sbjct: 367 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDI----EAA 422

Query: 164 SSSFDSIVTDAVDGSKPDTISKNIQLLASAYLNYFSRINGQN 39
              FDS++  ++           +   A+A  + FSR+ G+N
Sbjct: 423 QQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRM-GKN 463



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
 Frame = -1

Query: 869 IFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSSLLN 690
           +F  + + + I W ++I G    NL  EA+ +F  M   G +P+ V++  ++ +C+ L  
Sbjct: 322 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRLGEIPNEVTMLSILPACAHLGA 381

Query: 689 LHVGTQLHAFAYKL--GFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTALV 516
           + +G  +H +  K   G  +   + T+LIDMY KC +I+ A + F  +   ++ SW A++
Sbjct: 382 IDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMI 441

Query: 515 SGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDLR 336
            G                               +A HG ++    ++S+M ++G+ PD  
Sbjct: 442 FG-------------------------------FAMHGRANAAFDIFSRMGKNGIEPDDI 470

Query: 335 IFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY 219
            F  LL+ C  S +++ G+ +   + +  Y +  +++ Y
Sbjct: 471 TFVGLLSACSHSGMLDLGRHIFRSMTE-VYKITPKLEHY 508


>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  156 bits (394), Expect = 1e-35
 Identities = 77/231 (33%), Positives = 139/231 (60%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F +++ PN +IW +M  G A ++    A++++  M S G+LP+  +   ++ SC+ 
Sbjct: 41  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                 G Q+H    KLG++ D+ V T+LI MY +   ++ A + F   +  ++ S+TAL
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++GY S G   +A+K+F+ +P  ++VSWN M+SGYA+ G + E L+L+ +M ++ + PD 
Sbjct: 161 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 220

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
               S+++ C +S  +E G+QVH+ I  +G+  N +I   L  +Y K GE+
Sbjct: 221 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV 271



 Score =  101 bits (252), Expect = 3e-19
 Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 2/278 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W +MISG A      EA+ +F  M  + + PD  ++  V+ +C+ 
Sbjct: 173 AQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 232

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             ++ +G Q+H++    GF S++ +  ALID+Y KC  +                     
Sbjct: 233 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV--------------------- 271

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                     ETA  LFE +   +++SWN ++ GY       E L L+ +M RSG  P+ 
Sbjct: 272 ----------ETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 321

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIK--NGYHVNAQIDLYLTHMYQKFGELGSENEFT 165
               S+L  C     +E G+ +H  I K   G    +     L  MY K G++    E  
Sbjct: 322 VTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI----EAA 377

Query: 164 SSSFDSIVTDAVDGSKPDTISKNIQLLASAYLNYFSRI 51
              FDSI+  ++           +   A+A  + FSR+
Sbjct: 378 QQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 415



 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  + + + I W ++I G    NL  EA+ +F  M  SG  P++V++  ++ +C+ 
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 333

Query: 698 LLNLHVGTQLHAFAYKL--GFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWT 525
           L  + +G  +H +  K   G  +     T+LIDMY KC +I                   
Sbjct: 334 LGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI------------------- 374

Query: 524 ALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLP 345
                       E A+++F+ +   ++ SWN M+ G+A HG ++    ++S+M ++ + P
Sbjct: 375 ------------EAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 422

Query: 344 DLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY 219
           D   F  LL+ C  S +++ G+ +  + +K  Y +  +++ Y
Sbjct: 423 DDITFVGLLSACSHSGMLDLGRHIF-RSMKEDYKITPKLEHY 463


>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  156 bits (394), Expect = 1e-35
 Identities = 77/231 (33%), Positives = 139/231 (60%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F +++ PN +IW +M  G A ++    A++++  M S G+LP+  +   ++ SC+ 
Sbjct: 56  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 115

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                 G Q+H    KLG++ D+ V T+LI MY +   ++ A + F   +  ++ S+TAL
Sbjct: 116 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 175

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++GY S G   +A+K+F+ +P  ++VSWN M+SGYA+ G + E L+L+ +M ++ + PD 
Sbjct: 176 ITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDE 235

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
               S+++ C +S  +E G+QVH+ I  +G+  N +I   L  +Y K GE+
Sbjct: 236 STMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV 286



 Score =  101 bits (252), Expect = 3e-19
 Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 2/278 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W +MISG A      EA+ +F  M  + + PD  ++  V+ +C+ 
Sbjct: 188 AQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQ 247

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             ++ +G Q+H++    GF S++ +  ALID+Y KC  +                     
Sbjct: 248 SASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV--------------------- 286

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                     ETA  LFE +   +++SWN ++ GY       E L L+ +M RSG  P+ 
Sbjct: 287 ----------ETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 336

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIK--NGYHVNAQIDLYLTHMYQKFGELGSENEFT 165
               S+L  C     +E G+ +H  I K   G    +     L  MY K G++    E  
Sbjct: 337 VTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI----EAA 392

Query: 164 SSSFDSIVTDAVDGSKPDTISKNIQLLASAYLNYFSRI 51
              FDSI+  ++           +   A+A  + FSR+
Sbjct: 393 QQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430



 Score = 90.9 bits (224), Expect = 6e-16
 Identities = 55/222 (24%), Positives = 107/222 (48%), Gaps = 2/222 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  + + + I W ++I G    NL  EA+ +F  M  SG  P++V++  ++ +C+ 
Sbjct: 289 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 348

Query: 698 LLNLHVGTQLHAFAYKL--GFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWT 525
           L  + +G  +H +  K   G  +     T+LIDMY KC +I                   
Sbjct: 349 LGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI------------------- 389

Query: 524 ALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLP 345
                       E A+++F+ +   ++ SWN M+ G+A HG ++    ++S+M ++ + P
Sbjct: 390 ------------EAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 437

Query: 344 DLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY 219
           D   F  LL+ C  S +++ G+ +  + +K  Y +  +++ Y
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIF-RSMKEDYKITPKLEHY 478


>ref|XP_006601200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            isoform X1 [Glycine max] gi|571538727|ref|XP_006601201.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g13650-like isoform X2 [Glycine max]
          Length = 871

 Score =  155 bits (393), Expect = 1e-35
 Identities = 80/245 (32%), Positives = 135/245 (55%)
 Frame = -1

Query: 878  AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
            A R+F S+   N + WT  ISG+A   L ++A+ +F+ M  + ++ D  +L+ ++  CS 
Sbjct: 328  ARRVFNSLGEQNQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDEFTLATILGVCSG 387

Query: 698  LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                  G  LH +A K G +S V VG A+I MY +C + + AS AF  + + +  SWTA+
Sbjct: 388  QNYAASGELLHGYAIKSGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAM 447

Query: 518  VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
            ++ +   G  + A++ F+MMP+ N+++WN MLS Y +HGFS E ++LY  M    + PD 
Sbjct: 448  ITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDW 507

Query: 338  RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGELGSENEFTSS 159
              FA+ +  C +   ++ G QV + + K G   +  +   +  MY + G++    +    
Sbjct: 508  VTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKV--- 564

Query: 158  SFDSI 144
             FDSI
Sbjct: 565  -FDSI 568



 Score =  112 bits (279), Expect = 2e-22
 Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 14/245 (5%)
 Frame = -1

Query: 839 IIWTSMISGLASNNLINEAIHMFSVMTSSGILP----DNVSLSIVIDSCSSLLNLHVGTQ 672
           + WT+MISG   N L   +I  F  M           D  S +  + +C  L +  +  Q
Sbjct: 104 VSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRLALQ 163

Query: 671 LHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTALVSGYMSLGM 492
           LHA   KL   +   +  +L+DMY KC  I  A   F +I   ++F W +++ GY  L  
Sbjct: 164 LHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLNIESPSLFCWNSMIYGYSQLYG 223

Query: 491 HETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDLRIFASLLAV 312
              A  +F  MP+ + VSWN ++S ++++G     L  + +M   G  P+   + S+L+ 
Sbjct: 224 PYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSA 283

Query: 311 CIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQK----------FGELGSENEFTS 162
           C     ++ G  +HA+I++  + ++A +   L  MY K          F  LG +N+ + 
Sbjct: 284 CASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQNQVSW 343

Query: 161 SSFDS 147
           + F S
Sbjct: 344 TCFIS 348



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 55/230 (23%), Positives = 102/230 (44%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F  +   +H+ W ++IS  +        +  F  M + G  P+ ++   V+ +C+S
Sbjct: 227 ALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACAS 286

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
           + +L  G  LHA   ++    D  +G+ LIDMY KC                        
Sbjct: 287 ISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKC------------------------ 322

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                  G    A+++F  + + N VSW   +SG A+ G   + L L++QM ++ ++ D 
Sbjct: 323 -------GCLALARRVFNSLGEQNQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDE 375

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGE 189
              A++L VC       +G+ +H   IK+G   +  +   +  MY + G+
Sbjct: 376 FTLATILGVCSGQNYAASGELLHGYAIKSGMDSSVPVGNAIITMYARCGD 425



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
 Frame = -1

Query: 878  AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
            A + F  +   N I W SM+S    +    E + ++ +M S  + PD V+ +  I +C+ 
Sbjct: 460  ARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACAD 519

Query: 698  LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
            L  + +GTQ+ +   K G  SDV V  +++ MY +C  I  A + F  I++ N+ SW A+
Sbjct: 520  LATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAM 579

Query: 518  VSGYMSLGMHETAKKLFEMM------PQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSR- 360
            ++ +   G+   A + +E M      P H  +S+  +LSG +  G   E    +  M++ 
Sbjct: 580  MAAFAQNGLGNKAIETYEAMLRTECKPDH--ISYVAVLSGCSHMGLVVEGKHYFDSMTQV 637

Query: 359  SGLLPDLRIFASLLAVCIESKLVENGKQV 273
             G+ P    FA ++ +   + L+   K +
Sbjct: 638  FGISPTNEHFACMVDLLGRAGLLNQAKNL 666



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 8/174 (4%)
 Frame = -1

Query: 683 VGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTALVSGYM 504
           +  +LHA     G ++ + +   L+ +Y  C  +D A R F + N  NIF+W  ++  + 
Sbjct: 22  IARKLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTMLHAFF 81

Query: 503 SLGMHETAKKLFEMMP--QHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLP----D 342
             G    A+ LF+ MP    + VSW  M+SGY ++G     ++ +  M R         D
Sbjct: 82  DSGRMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDIQNCD 141

Query: 341 LRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQ--IDLYLTHMYQKFGEL 186
              +   +  C          Q+HA +IK   H+ AQ  I   L  MY K G +
Sbjct: 142 PFSYTCTMKACGCLASTRLALQLHAHVIK--LHLGAQTCIQNSLVDMYIKCGAI 193


>gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
          Length = 526

 Score =  155 bits (393), Expect = 1e-35
 Identities = 78/231 (33%), Positives = 135/231 (58%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F +++ PN +IW +M  G A ++    A++++  M S G+LP+  +   ++ SC+ 
Sbjct: 41  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAK 100

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                 G Q+H    KLG++ D+ V T+LI MY +   ++ A + F   +  ++ S+TAL
Sbjct: 101 SKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTAL 160

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           + GY S G  E A+KLF+ +P  ++VSWN M+SGYA+ G   E L+L+  M ++ + PD 
Sbjct: 161 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 220

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
               ++++ C +S  +E G+QVH  I  +G+  N +I   L  +Y K GE+
Sbjct: 221 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEV 271



 Score =  102 bits (253), Expect = 2e-19
 Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 2/278 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W +MISG A      EA+ +F  M  + + PD  ++  V+ +C+ 
Sbjct: 173 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 232

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             ++ +G Q+H +    GF S++ +  ALID+Y KC  +                     
Sbjct: 233 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEV--------------------- 271

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                     ETA  LFE +   +++SWN ++ GY       E L L+ +M RSG  P+ 
Sbjct: 272 ----------ETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 321

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIK--NGYHVNAQIDLYLTHMYQKFGELGSENEFT 165
               S+L  C     ++ G+ +H  I K   G    + +   L  MY K G++    E  
Sbjct: 322 VTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDI----EAA 377

Query: 164 SSSFDSIVTDAVDGSKPDTISKNIQLLASAYLNYFSRI 51
              FDS++T ++           +   A+A  + FS++
Sbjct: 378 KQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKM 415



 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 2/222 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  + + + I W ++I G    NL  EA+ +F  M  SG  P++V++  ++ +C+ 
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 333

Query: 698 LLNLHVGTQLHAFAYKL--GFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWT 525
           L  + +G  +H +  K   G  +   + T+LIDMY KC +I+ A + F  +   ++ SW 
Sbjct: 334 LGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWN 393

Query: 524 ALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLP 345
           A++ G                               +A HG ++    L+S+M ++G+ P
Sbjct: 394 AMIFG-------------------------------FAMHGKANAAFDLFSKMRKNGIDP 422

Query: 344 DLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY 219
           D   F  LL+ C  S +++ G+ +   + ++ Y +  +++ Y
Sbjct: 423 DDITFVGLLSACSHSGMLDLGRHIFRSMSQD-YKITPKLEHY 463


>gb|AEP33766.1| organelle transcript processing 82, partial [Lepidium virginicum]
          Length = 464

 Score =  155 bits (393), Expect = 1e-35
 Identities = 78/231 (33%), Positives = 136/231 (58%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F +++ PN +IW +M  G A N+    A+ ++  M S G+LP++ S   ++ SC+ 
Sbjct: 26  AISVFETIEEPNLLIWNTMFRGHALNSDSVSALKLYVCMISLGLLPNSYSFPFLLKSCAK 85

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                 G Q+H    KLG++ D+ V T+LI MY +   ++ A + F   +  ++ S+TAL
Sbjct: 86  SKAFREGQQIHGHVVKLGYDLDMYVHTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 145

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           ++GY S G  ++A+KLF+ +   +IVSWN M+SGY +     E L+LY +M ++ + PD 
Sbjct: 146 ITGYASRGYTKSARKLFDEILVKDIVSWNAMISGYVETFNYKEALELYKEMVKTNVKPDE 205

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
               ++++ C +S  +E G+QVH+ I  +G+  N ++   L  MY K GE+
Sbjct: 206 STMVTVVSACAQSSNIELGRQVHSLIEDHGFGSNLKVVNALMDMYSKCGEM 256



 Score =  100 bits (250), Expect = 5e-19
 Identities = 69/278 (24%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W +MISG        EA+ ++  M  + + PD  ++  V+ +C+ 
Sbjct: 158 ARKLFDEILVKDIVSWNAMISGYVETFNYKEALELYKEMVKTNVKPDESTMVTVVSACAQ 217

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             N+ +G Q+H+     GF S++ V  AL+DMY KC                        
Sbjct: 218 SSNIELGRQVHSLIEDHGFGSNLKVVNALMDMYSKC------------------------ 253

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                  G  ETA +LF+ +   + +SWN ++ G+       E L L+ +M RSG  P+ 
Sbjct: 254 -------GEMETACRLFQGLVNKDAISWNTLIGGHTHMNLYKEALFLFQEMLRSGESPND 306

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIK--NGYHVNAQIDLYLTHMYQKFGELGSENEFT 165
               S+L+ C     ++ G+ +H  I K   G   ++ +   L  MY K G++    E  
Sbjct: 307 VTMLSVLSACAHLGAIDIGRWIHVYIDKRLKGVTNSSSLRTSLIDMYAKCGDI----EAA 362

Query: 164 SSSFDSIVTDAVDGSKPDTISKNIQLLASAYLNYFSRI 51
           S  FDS++  ++           +   A+A  + FS++
Sbjct: 363 SQVFDSMLARSLSSWNAMIFGFAMHGKANAAFDLFSKM 400



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A R+F  + + + I W ++I G    NL  EA+ +F  M  SG  P++V++  V+ +C+ 
Sbjct: 259 ACRLFQGLVNKDAISWNTLIGGHTHMNLYKEALFLFQEMLRSGESPNDVTMLSVLSACAH 318

Query: 698 LLNLHVGTQLHAFAYKL--GFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWT 525
           L  + +G  +H +  K   G  +   + T+LIDMY KC +I+ AS+ F  +   ++ SW 
Sbjct: 319 LGAIDIGRWIHVYIDKRLKGVTNSSSLRTSLIDMYAKCGDIEAASQVFDSMLARSLSSWN 378

Query: 524 ALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLP 345
           A++ G                               +A HG ++    L+S+M +SG+ P
Sbjct: 379 AMIFG-------------------------------FAMHGKANAAFDLFSKMRKSGIEP 407

Query: 344 DLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY 219
           D   F  LL+ C  S +++ G+ + + + ++ Y +  +++ Y
Sbjct: 408 DDITFVGLLSACSHSGMLDLGRHIFSSMTQD-YKITPKLEHY 448


>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338275|gb|EFH68692.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  155 bits (393), Expect = 1e-35
 Identities = 78/231 (33%), Positives = 137/231 (59%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A+ +F +++ PN +IW +M  G A ++    A+ ++  M S G+LP++ +   ++ SC+ 
Sbjct: 87  AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
                 G Q+H    KLG++ D+ V T+LI +Y +   ++ A + F      ++ S+TAL
Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTAL 206

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
           + GY S G  E+A+KLF+ +P  ++VSWN M+SGYA+ G   E L+L+ +M ++ + PD 
Sbjct: 207 IKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDE 266

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLYLTHMYQKFGEL 186
               ++++ C +S  +E G+QVH+ I  +G+  N +I   L  +Y K GEL
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGEL 317



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 69/278 (24%), Positives = 120/278 (43%), Gaps = 2/278 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A ++F  +   + + W +MISG A      EA+ +F  M  + I PD  ++  V+ +C+ 
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQ 278

Query: 698 LLNLHVGTQLHAFAYKLGFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWTAL 519
             ++ +G Q+H++    GF S++ +  +L+D+Y KC                        
Sbjct: 279 SGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKC------------------------ 314

Query: 518 VSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLPDL 339
                  G  ETA  LFE +   +++SWN ++ GY       E L L+ +M RSG  P+ 
Sbjct: 315 -------GELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPND 367

Query: 338 RIFASLLAVCIESKLVENGKQVHAQIIKNGYHVN--AQIDLYLTHMYQKFGELGSENEFT 165
               S+L  C     ++ G+ +H  I K        + +   L  MY K G++    E  
Sbjct: 368 VTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDI----EAA 423

Query: 164 SSSFDSIVTDAVDGSKPDTISKNIQLLASAYLNYFSRI 51
              F+SI+  ++           +   A A  + FSR+
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRM 461



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 2/222 (0%)
 Frame = -1

Query: 878 AVRIFGSVKHPNHIIWTSMISGLASNNLINEAIHMFSVMTSSGILPDNVSLSIVIDSCSS 699
           A  +F  + + + I W ++I G    NL  EA+ +F  M  SG  P++V++  ++ +C+ 
Sbjct: 320 ACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAH 379

Query: 698 LLNLHVGTQLHAFAYKL--GFESDVVVGTALIDMYGKCWNIDPASRAFADINMHNIFSWT 525
           L  + +G  +H +  K      +   + T+LIDMY KC +I+ A + F  I   ++ SW 
Sbjct: 380 LGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439

Query: 524 ALVSGYMSLGMHETAKKLFEMMPQHNIVSWNIMLSGYAKHGFSSEVLQLYSQMSRSGLLP 345
           A++                                G+A HG +     ++S+M + G+ P
Sbjct: 440 AMI-------------------------------FGFAMHGRADAAFDIFSRMRKIGIEP 468

Query: 344 DLRIFASLLAVCIESKLVENGKQVHAQIIKNGYHVNAQIDLY 219
           D   F  LL+ C  S +++ G+ +   + ++ Y +  +++ Y
Sbjct: 469 DDITFVGLLSACSRSGMLDLGRHIFRTMTQD-YKITPKLEHY 509