BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00009888
         (2895 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ12507.1| hypothetical protein PRUPE_ppa001468mg [Prunus pe...   881   0.0  
gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group] gi|...   878   0.0  
gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indi...   877   0.0  
gb|EOY21034.1| CRS1 / YhbY domain-containing protein [Theobroma ...   873   0.0  
ref|XP_004963613.1| PREDICTED: chloroplastic group IIA intron sp...   870   0.0  
ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron sp...   863   0.0  
ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron sp...   857   0.0  
dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]    855   0.0  
gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitat...   843   0.0  
ref|XP_006655563.1| PREDICTED: chloroplastic group IIA intron sp...   841   0.0  
emb|CBI15459.3| unnamed protein product [Vitis vinifera]              840   0.0  
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   838   0.0  
ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Popu...   838   0.0  
ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [A...   832   0.0  
ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron sp...   823   0.0  
ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citr...   820   0.0  
ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron sp...   818   0.0  
ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron sp...   817   0.0  
ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citr...   810   0.0  
ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron sp...   810   0.0  

>gb|EMJ12507.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
          Length = 820

 Score =  881 bits (2277), Expect = 0.0
 Identities = 468/756 (61%), Positives = 553/756 (73%), Gaps = 40/756 (5%)
 Frame = -1

Query: 2673 PSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRG------------------ 2548
            PS  + PP  SAPWL  W PP +S ++ P ++  ++ +   G                  
Sbjct: 60   PSHKSKPP--SAPWLNTW-PPRNSPAELPCQKVNEKVNESHGRDQAVKANTTRYFDKNKG 116

Query: 2547 -GSIERIVYRLRNLELSCEEEE-----GVDG-DSKETPLSGKERLGELLERTWSRPHTC- 2392
              +IERIV RLRNL L  ++EE     G+DG DS +   SG+E+LG+LL+R W RP    
Sbjct: 117  QSAIERIVLRLRNLGLGSDDEEEDDGLGLDGQDSMQPAESGEEKLGDLLQREWVRPDYVL 176

Query: 2391 ---QMVDRILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXX 2221
               +  D + LPWE+ED+    EEE  KG +++R++AP+LAELTIED             
Sbjct: 177  AEQKSNDEVALPWEKEDE--ISEEEEVKGLRKRRVKAPSLAELTIEDEELKRLRRMGMVL 234

Query: 2220 XXXITVPKAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRS 2041
               I+VPKAG+TQA+ EKIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLV+WRS
Sbjct: 235  RERISVPKAGITQAVLEKIHDTWRKEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRS 294

Query: 2040 GSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKP 1861
            GSVMVVYRGSNYK PS++Q  D          E  +LFIPDVS   T      +  TS P
Sbjct: 295  GSVMVVYRGSNYKGPSKSQTVD---------REGGALFIPDVSSAETSATRSGNDATSGP 345

Query: 1860 VTSSSFDLNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTP 1681
              +        H  N+ EEE EFN LLD LGPRFV+WWGTG+LPVDADLLP+ IPG++TP
Sbjct: 346  DNNEKAVKIPAHLPNMTEEEAEFNSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTP 405

Query: 1680 FRLLPSGMRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAV 1501
            FRLLP+GMR+RLTN+EMTNLRKLAK LPCHFALGRNR+H GLA AI+K+WEKS V KIAV
Sbjct: 406  FRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAKIAV 465

Query: 1500 KRGVQNTNNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQ 1321
            KRG+QNTNNKLMAEELK L GG LLLRNKYYIV YRGKDF+P SVA ALAER+ELTK++Q
Sbjct: 466  KRGIQNTNNKLMAEELKTLTGGVLLLRNKYYIVFYRGKDFLPTSVAAALAERQELTKQVQ 525

Query: 1320 DAEEQLRKRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTT 1141
            D EE++R + I   S  A EG A  GTLAEF EAQARWGR+IS EER+ M EE S+ K  
Sbjct: 526  DVEEKMRIKAIDAASSGAEEGQALAGTLAEFYEAQARWGREISAEEREKMIEEDSKAKNA 585

Query: 1140 KLFKRVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKA 961
            +L KR+EHKL +AQAKK RAE+LL+KIE+SM+P  P  DQET+TDEER +FRR+GLRMKA
Sbjct: 586  RLVKRIEHKLGVAQAKKLRAEKLLSKIESSMLPAGPDYDQETVTDEERVMFRRVGLRMKA 645

Query: 960  YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPV 781
            YLPLGIRGVFDGV+ENMHLHWKHRELVKLISKQKTLAFVE TARLLE+ESGGILVAIE V
Sbjct: 646  YLPLGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERV 705

Query: 780  PKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKE 601
            PKGYALIYYRGKNYQRPI+LRPRNLLTKAKALKR++AIQRHEALSQHI ELEK IE M  
Sbjct: 706  PKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAIQRHEALSQHISELEKTIEQMSS 765

Query: 600  ELGISENEEIAAT-----------GTNTMQSDDESS 526
            E+G+SE+    +T            +  +QS+DE+S
Sbjct: 766  EIGVSEDIADESTWSSRDPDQIHGASEFVQSEDEAS 801


>gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
            gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 798

 Score =  878 bits (2269), Expect = 0.0
 Identities = 462/716 (64%), Positives = 549/716 (76%), Gaps = 8/716 (1%)
 Frame = -1

Query: 2652 PFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEEEGVDG 2473
            P R APWLQ+W P +      PA   P  P      SI+RIV+RLRNL L+ +++E    
Sbjct: 60   PTRGAPWLQKWGPTD------PAAPPPPPPAPSPTSSIDRIVHRLRNLGLASDDDEPTAA 113

Query: 2472 DSKET-PLSGKERLGELLERTWSRPH---TCQMVDRILLPWERED-DRGFVEEEVTKGEK 2308
             +  T P  G ERL +LL+R+W+RP         D  +LPWER++  RG   EE   G K
Sbjct: 114  AATATAPPDGNERLSDLLDRSWARPDQQFAASSFDESVLPWERDEVARGRENEE--DGVK 171

Query: 2307 RKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAGVTQAITEKIHDAWRKSEIVRL 2128
            R+R+RAP+LAELTIED                ITVPKAGVTQA+TEKIHDAWRKSE+VRL
Sbjct: 172  RRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRL 231

Query: 2127 KFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVS 1948
            KFHEDL HDMKTAHELVE RTGGL+IWRSGSVMVVYRGSNYKRP +++  D   N + V 
Sbjct: 232  KFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSETLD--GNSSAVK 289

Query: 1947 NETESLFIPDVSETTTLVENVDHSVTSKPVTSS---SFDLNLKHEKNLAEEEVEFNHLLD 1777
                +LFIPD S  T      +H    K V +    +  LN+++ +++ EEE+EFN +LD
Sbjct: 290  GADGTLFIPDASSPT------EHDSQGKDVNTQREIAARLNMQNTEDMTEEELEFNQMLD 343

Query: 1776 GLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLP 1597
             LGPRFVDWWGTGILPVDADLLPQ IPG++TPFRLLP+GMR  LTN+E+TNLRKLA+ LP
Sbjct: 344  ELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKLARDLP 403

Query: 1596 CHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRN 1417
            CHFALGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLM+EE+K L GGTLLLRN
Sbjct: 404  CHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGTLLLRN 463

Query: 1416 KYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTL 1237
            KYYIVIYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R   +     ++ +G A  GTL
Sbjct: 464  KYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRCIPVVHSMDDSLDGHALAGTL 523

Query: 1236 AEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIE 1057
            AEF EAQARWGR+++ +E++ MKE +SR    KLFKR+EHKLSIAQAK  RAE+LL+KIE
Sbjct: 524  AEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERLLSKIE 583

Query: 1056 ASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVK 877
            ASMV  NP +D+E ITDEERSVFRRIGLR+KAYLP+GIRGVFDGVIENMHLHWKHRE+VK
Sbjct: 584  ASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVK 643

Query: 876  LISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTK 697
            LI+KQKTL FVE TARLLEYESGGILVAIE V KGYALI+YRGKNY+RPI++RPRNLLTK
Sbjct: 644  LITKQKTLPFVEETARLLEYESGGILVAIERVTKGYALIFYRGKNYRRPINIRPRNLLTK 703

Query: 696  AKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIAATGTNTMQSDDES 529
            AKALKRA+A+QRHEALSQHI ELE NI  MK +LGI  +EE    G+++   ++E+
Sbjct: 704  AKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDEEYEEDGSDSENENNEA 759


>gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
          Length = 801

 Score =  877 bits (2267), Expect = 0.0
 Identities = 462/716 (64%), Positives = 549/716 (76%), Gaps = 8/716 (1%)
 Frame = -1

Query: 2652 PFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEEEGVDG 2473
            P R APWLQ+W P +      PA   P         SI+RIV+RLRNL L+ +++E    
Sbjct: 63   PTRGAPWLQKWGPTD------PAAPPPPPLAPSPTSSIDRIVHRLRNLGLASDDDEPAAA 116

Query: 2472 DSKET-PLSGKERLGELLERTWSRPH---TCQMVDRILLPWERED-DRGFVEEEVTKGEK 2308
             +  T P  G ERL +LL+R+W+RP         D  +LPWER++  RG   EE   G K
Sbjct: 117  AATATAPPDGNERLSDLLDRSWARPDQQFAASSFDESVLPWERDEVARGRENEE--DGVK 174

Query: 2307 RKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAGVTQAITEKIHDAWRKSEIVRL 2128
            R+R+RAP+LAELTIED                ITVPKAGVTQA+TEKIHDAWRKSE+VRL
Sbjct: 175  RRRVRAPSLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRL 234

Query: 2127 KFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVS 1948
            KFHEDL HDMKTAHELVE RTGGL+IWRSGSVMVVYRGSNYKRP +++  D   N + V 
Sbjct: 235  KFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSETLD--GNSSAVK 292

Query: 1947 NETESLFIPDVSETTTLVENVDHSVTSKPVTSS---SFDLNLKHEKNLAEEEVEFNHLLD 1777
                +LFIPD S  T      +H    K V +    +  LN+++ +++ EEE+EFN +LD
Sbjct: 293  GADGTLFIPDASSPT------EHDSQGKDVNTQREIAARLNMQNTEDMTEEELEFNQMLD 346

Query: 1776 GLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLP 1597
             LGPRFVDWWGTGILPVDADLLPQ IPG++TPFRLLP+GMR  LTN+E+TNLRKLA+ LP
Sbjct: 347  ELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKLARDLP 406

Query: 1596 CHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRN 1417
            CHFALGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLM+EE+K L GGTLLLRN
Sbjct: 407  CHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGTLLLRN 466

Query: 1416 KYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTL 1237
            KYYIVIYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R   +     ++ +G A  GTL
Sbjct: 467  KYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRCIPVVHSMDDSLDGHALAGTL 526

Query: 1236 AEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIE 1057
            AEF EAQARWGR+++ +E++ MKE +SR    KLFKR+EHKLSIAQAK  RAE+LL+KIE
Sbjct: 527  AEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERLLSKIE 586

Query: 1056 ASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVK 877
            ASMV  NP +D+E ITDEERSVFRRIGLR+KAYLP+GIRGVFDGVIENMHLHWKHRE+VK
Sbjct: 587  ASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVK 646

Query: 876  LISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTK 697
            LI+KQKTL FVE TARLLEYESGGILVAIE VPKGYALI+YRGKNY+RPI++RPRNLLTK
Sbjct: 647  LITKQKTLPFVEETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTK 706

Query: 696  AKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIAATGTNTMQSDDES 529
            AKALKRA+A+QRHEALSQHI ELE NI  MK +LGI  +EE    G+++   ++E+
Sbjct: 707  AKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDEEYEEDGSDSENENNEA 762


>gb|EOY21034.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
          Length = 919

 Score =  873 bits (2255), Expect = 0.0
 Identities = 469/752 (62%), Positives = 557/752 (74%), Gaps = 24/752 (3%)
 Frame = -1

Query: 2706 PWEDNDEDGRLPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPK------EPDVGRGG 2545
            PW   D++  +P  S+     S+  LQ W  P     Q+    K        + D  +  
Sbjct: 132  PW---DQEASVPPNSS----ASSSSLQAWSSPSQKVIQSDGDDKTDVETRYFDRDKSQS- 183

Query: 2544 SIERIVYRLRNLEL-SCEEEEGVDGDSK--ETPLSGKERLGELLERTWSRPHTCQMVDR- 2377
            +IERIV RLRNL L S +E+EG D   +   TP++G+ERLG+LL+R W RP T  +++R 
Sbjct: 184  AIERIVLRLRNLGLGSDDEDEGEDETDQYNSTPVTGEERLGDLLKREWVRPDT-MLIERE 242

Query: 2376 ---ILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXIT 2206
                +LPWER++    V +E   G K++R+RAPTLAELTIED                I 
Sbjct: 243  KEEAVLPWERDEAEVEVVKEGVLGVKKRRVRAPTLAELTIEDEELRRLRRMGMYLRERIN 302

Query: 2205 VPKAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMV 2026
            VPKAG+TQA+ EKIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLV+WRSGSVMV
Sbjct: 303  VPKAGITQAVLEKIHDKWRKEELVRLKFHEVLATDMKTAHEIVERRTGGLVLWRSGSVMV 362

Query: 2025 VYRGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSS 1846
            VYRGSNY+ PSR+Q  D          E E+LFIPDVS  +  V   +   TS P     
Sbjct: 363  VYRGSNYEGPSRSQSID---------REGEALFIPDVSSASNAVRGSETGKTSTPEKCEP 413

Query: 1845 FDLNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLP 1666
              +  +  +++ EEE E+N LLDG+GPRFV+WWGTG+LPVDADLLPQ IPG++TPFRLLP
Sbjct: 414  VVVKPERSESMTEEEAEYNSLLDGVGPRFVEWWGTGVLPVDADLLPQKIPGYKTPFRLLP 473

Query: 1665 SGMRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQ 1486
            +GMR RLTN+EMTNLRKLAK LPCHFALGRNR+H GLA AI+K+WEKSLVVKIAVKRG+Q
Sbjct: 474  AGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSLVVKIAVKRGIQ 533

Query: 1485 NTNNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQ 1306
            NTNNKLMAEELK L GG LLLRNKY+IVIYRGKDF+P SVA ALAER+ELTK+IQD EE+
Sbjct: 534  NTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTSVAAALAERQELTKQIQDVEEK 593

Query: 1305 LRKRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKR 1126
            +R R +        +G+AP GTLAEF EAQA WGR+IS EER+ M EEAS+ K  +L KR
Sbjct: 594  VRIRAVEPAQSGEDKGEAPAGTLAEFYEAQACWGREISAEEREKMIEEASKAKHARLVKR 653

Query: 1125 VEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLG 946
            VEHKL++AQAKK RAE+LL KIE+SM+P  P  DQETITDEER +FRR+GLRMK YLPLG
Sbjct: 654  VEHKLAVAQAKKLRAERLLAKIESSMIPAAPDYDQETITDEERVMFRRVGLRMKPYLPLG 713

Query: 945  IRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYA 766
            IRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVE TARLLE+ESGGILVAIE VPKGYA
Sbjct: 714  IRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERVPKGYA 773

Query: 765  LIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGIS 586
            LIYYRGKNY RPISLRPRNLLTKAKALKR++A+QRHEALSQHI ELE+ IE MK+E+G S
Sbjct: 774  LIYYRGKNYHRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEEMKKEIGAS 833

Query: 585  ---ENEEIAATG--------TNTMQSDDESSF 523
               E+E+   +G        +   QS+DE+S+
Sbjct: 834  QDVEDEDSQVSGEHGQFDPVSELTQSEDEASY 865


>ref|XP_004963613.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Setaria italica]
          Length = 774

 Score =  870 bits (2249), Expect = 0.0
 Identities = 452/712 (63%), Positives = 548/712 (76%), Gaps = 4/712 (0%)
 Frame = -1

Query: 2652 PFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEEEGVDG 2473
            P   APWLQ+W P + S    PA      P      SI+RIV+RLRNL L+ ++++    
Sbjct: 40   PSTGAPWLQKWAPSDPSQ---PAPAPAPSPTT----SIDRIVHRLRNLGLASDDDDPSAA 92

Query: 2472 DSKET-PLSGKERLGELLERTWSRPH---TCQMVDRILLPWEREDDRGFVEEEVTKGEKR 2305
             +  T P  G ERLG+LL+R+W+RP         D  +LPWER+D+      +   G KR
Sbjct: 93   TATATAPPDGTERLGDLLDRSWARPDRQFAAASFDDAVLPWERDDEAAAGGRDEEDGAKR 152

Query: 2304 KRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAGVTQAITEKIHDAWRKSEIVRLK 2125
            +R++APTLAELTIED                ITVPKAGVT AITEKIHDAWRKSE+VRLK
Sbjct: 153  RRVKAPTLAELTIEDEELRRLRRLGMTLRDRITVPKAGVTTAITEKIHDAWRKSELVRLK 212

Query: 2124 FHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSN 1945
            FHEDL HDMKTAHELVE RTGGL+IWRSGSVMVVYRGSNYKRP ++Q  +  ++Q  V  
Sbjct: 213  FHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSQTLNGASSQ--VKG 270

Query: 1944 ETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAEEEVEFNHLLDGLGP 1765
            E  +LFIPD S      EN           +++  LN+++ +++ EEE+EFN +LD LGP
Sbjct: 271  EDGALFIPDASSPA---ENDSQGKDLAAQHANASQLNMQNTEDMTEEELEFNQMLDELGP 327

Query: 1764 RFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLPCHFA 1585
            RFVDWWGTGILPVDADLLPQ IP ++TP+R+LP+GMR+ LTN+E+TNLRKLA+ LPCHFA
Sbjct: 328  RFVDWWGTGILPVDADLLPQTIPEYKTPYRVLPTGMRSTLTNAELTNLRKLARNLPCHFA 387

Query: 1584 LGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRNKYYI 1405
            LGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLMAEE+K L GGTLLLRNK+YI
Sbjct: 388  LGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEEIKNLTGGTLLLRNKFYI 447

Query: 1404 VIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTLAEFL 1225
            VIYRGKDF+P SVA  LAEREELTK+IQ+ EEQ R  +IG+P  +  +G A  GTLAEF 
Sbjct: 448  VIYRGKDFLPTSVAAVLAEREELTKDIQNMEEQRRNVSIGQPPDDGLDGHALAGTLAEFQ 507

Query: 1224 EAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIEASMV 1045
            EAQARWGR+++ +E++ MKE +SR +  KL++++EHKLS+AQAK  RAE+LL+KIEASMV
Sbjct: 508  EAQARWGREVTAKEQEEMKEASSRSEKQKLYRKLEHKLSVAQAKIHRAERLLSKIEASMV 567

Query: 1044 PVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISK 865
              +PC+D+E ITDEE+SVFRRIGLR+K+YLPLG+RGVFDGVIENMHLHWKHRE+VKLISK
Sbjct: 568  LADPCDDREMITDEEKSVFRRIGLRLKSYLPLGVRGVFDGVIENMHLHWKHREVVKLISK 627

Query: 864  QKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTKAKAL 685
            QKTL+FV+ TARLLEYESGGILVAIE VPKGYALI+YRGKNY+RPI++RPRNLLTKAKAL
Sbjct: 628  QKTLSFVQETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKAL 687

Query: 684  KRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIAATGTNTMQSDDES 529
            KRA+A+QRHEALSQHI +LE NI+ MK +LGI   EE         Q DD S
Sbjct: 688  KRAVAMQRHEALSQHIDQLENNIKQMKLDLGIEYYEE---------QEDDSS 730


>ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  863 bits (2231), Expect = 0.0
 Identities = 446/712 (62%), Positives = 552/712 (77%), Gaps = 3/712 (0%)
 Frame = -1

Query: 2652 PFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEEEGVDG 2473
            P R APW+Q+W P + S +  PA      P      SI+RIV+RLRNL L  +++E    
Sbjct: 57   PSRGAPWMQKWAPADPS-APPPAPSPGPTPTT----SIDRIVHRLRNLGLGTDDDEP--- 108

Query: 2472 DSKETPLSGKERLGELLERTWSRPH---TCQMVDRILLPWEREDDRGFVEEEVTKGEKRK 2302
             +  TPL+GKERLG+LL+R+W+RP         D+ +LPWER+ D     +E   G KRK
Sbjct: 109  SAAATPLNGKERLGDLLDRSWARPDRHFAASSFDQAVLPWERDQDTDGGMDEEEGGAKRK 168

Query: 2301 RLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAGVTQAITEKIHDAWRKSEIVRLKF 2122
            R++AP+LAELT++D+               ITVPKAGVTQA+TEKIHDAWRKSE+VRLKF
Sbjct: 169  RVKAPSLAELTMDDAELRRLRGMGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKF 228

Query: 2121 HEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSNE 1942
            HEDL +DMKTAHELVE RTGGL+IWR+GSVMVVYRG+NY RP+++Q  D     +    E
Sbjct: 229  HEDLANDMKTAHELVERRTGGLIIWRAGSVMVVYRGNNYTRPTKSQTLD--GTSSTRKGE 286

Query: 1941 TESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAEEEVEFNHLLDGLGPR 1762
              +LFIPD S      +N    +T++    S   LN+ +  ++ EEE+EFN +LD LGPR
Sbjct: 287  DNTLFIPDASSPAEN-DNQGKDLTAQHDNLSR--LNIHNTDDMTEEELEFNQMLDELGPR 343

Query: 1761 FVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLPCHFAL 1582
            FVDWWGTGILPVDADLLPQ IPG++ PFRLLP+GMR  LTN+E+TNLRKLA+ LPCHFAL
Sbjct: 344  FVDWWGTGILPVDADLLPQTIPGYKAPFRLLPTGMRTSLTNAELTNLRKLARSLPCHFAL 403

Query: 1581 GRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRNKYYIV 1402
            GRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNN+LM++E+K L GGTLLLRNKY+IV
Sbjct: 404  GRNRNHQGLASAIIKLWEKSLVVKIAVKRGIQNTNNELMSDEIKKLTGGTLLLRNKYFIV 463

Query: 1401 IYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTLAEFLE 1222
            IYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R   I     +  +G A VGTLAEF E
Sbjct: 464  IYRGKDFLPQSVAVALAEREELTKDIQNVEEQRRCTPIAHSPEDGFDGHALVGTLAEFQE 523

Query: 1221 AQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIEASMVP 1042
            AQARWGR ++++E++ MKE +SR +  K+F+R+EHKLSIAQAK  RA +LL+KIEASM+ 
Sbjct: 524  AQARWGRDVTSKEQEEMKEASSRLEKEKIFRRLEHKLSIAQAKIHRAGKLLSKIEASMIL 583

Query: 1041 VNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQ 862
             NP +D+E ITDEERSVFRRIGL+MKAYLP+GIRGVFDGVIENMHLHWKHRE+VKLI+KQ
Sbjct: 584  ANPSDDREMITDEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQ 643

Query: 861  KTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTKAKALK 682
            KTLAFV  TARLLEYESGGILVA+E VPKGYALI+YRGKNY+RPI++RPRNLLTKAKALK
Sbjct: 644  KTLAFVNETARLLEYESGGILVAVERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALK 703

Query: 681  RAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIAATGTNTMQSDDESS 526
            RA+A+QRHEALSQHI +LE N++ MK +LG+ + +E     +++ +SDD ++
Sbjct: 704  RAVAMQRHEALSQHIAQLESNMKQMKFDLGMEDYDEEDEDSSDS-ESDDNTA 754


>ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 820

 Score =  857 bits (2214), Expect = 0.0
 Identities = 460/746 (61%), Positives = 544/746 (72%), Gaps = 29/746 (3%)
 Frame = -1

Query: 2673 PSGSTNPPFRSAPWLQQW--------DPP---------ESSTSQAPAKRKPKEPDVGRGG 2545
            PS S++    +APWL +W        +PP         ES   + P+    +  D  +G 
Sbjct: 61   PSSSSS----TAPWLNKWPSRGQAPAEPPRQKFSDRVKESDGREKPSSNAARYVDKDKGQ 116

Query: 2544 S-IERIVYRLRNLELSCEEEEGVDGDSKETP----LSGKERLGELLERTWSRPHTCQMVD 2380
            S IERIV+RLRNL L  +EEE   GD  E       SG E+LG+LL+R W RP      +
Sbjct: 117  SAIERIVFRLRNLGLGDDEEEEESGDGVELDSMPAASGAEKLGDLLQREWVRPDYILAEE 176

Query: 2379 R----ILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXX 2212
            +    + LPWE+E++    +EEV    K +R +AP+LAELTIED                
Sbjct: 177  KGDDDVALPWEKEEEELSEDEEVKGMRKARRSKAPSLAELTIEDEELRRLRRLGMVLRER 236

Query: 2211 ITVPKAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSV 2032
            I+VPKAG+TQA+ EKIHD WRK E+VRLKFHE L HDMKTAHE+VE RTGGLV+WRSGSV
Sbjct: 237  ISVPKAGITQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVLWRSGSV 296

Query: 2031 MVVYRGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKP-VT 1855
            MVVYRGSNYK PS+++               ++LFIPDVS   T V    +  TS P  T
Sbjct: 297  MVVYRGSNYKGPSKSEP---------AGRGGDALFIPDVSSAETSVTRGGNDATSAPDKT 347

Query: 1854 SSSFDLNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFR 1675
              +  +     K + +EE EFN LLD LGPRFV++WGTGILPVDADLLP+ IPG++TPFR
Sbjct: 348  EQAVKIPEPLPKKMTDEEAEFNSLLDELGPRFVEYWGTGILPVDADLLPKTIPGYKTPFR 407

Query: 1674 LLPSGMRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKR 1495
            LLP+GMR+RLTN+EMTNLRKLAK +PCHFALGRNR+H GLA AILK+WEKS V KIAVKR
Sbjct: 408  LLPTGMRSRLTNAEMTNLRKLAKSIPCHFALGRNRNHQGLASAILKVWEKSSVAKIAVKR 467

Query: 1494 GVQNTNNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDA 1315
            G+QNTNNK+MAEELKAL GG LLLRNKYYIVIYRGKDF+P +VATALAER+ELTK++QD 
Sbjct: 468  GIQNTNNKIMAEELKALTGGVLLLRNKYYIVIYRGKDFVPTTVATALAERQELTKQVQDV 527

Query: 1314 EEQLRKRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKL 1135
            EE +R + I   + +  EG A  GTLAEF EAQARWGR+IS EER  M EE S+ K  + 
Sbjct: 528  EEIVRIKPIDAAASSTEEGQALAGTLAEFYEAQARWGREISAEERKKMIEEDSKAKMARR 587

Query: 1134 FKRVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYL 955
             KR+EHKL +AQAKK RAE LL KIE++M+P  P  DQETITDEER +FRR+GLRMKAYL
Sbjct: 588  AKRIEHKLGVAQAKKLRAESLLNKIESAMLPAGPDYDQETITDEERVMFRRVGLRMKAYL 647

Query: 954  PLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPK 775
            PLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVE +ARLLEYESGGILVAIE VPK
Sbjct: 648  PLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDSARLLEYESGGILVAIERVPK 707

Query: 774  GYALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEEL 595
            GYALIYYRGKNYQRPI+LRPRNLLTKAKALKR++A+QRHEALSQHI ELE+ IE M+ E+
Sbjct: 708  GYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAMQRHEALSQHIEELERTIEQMRSEI 767

Query: 594  GISENEEIAAT--GTNTMQSDDESSF 523
            GISE+ +   T    +  QS  +S F
Sbjct: 768  GISEDVDNERTWGSRDPHQSGHDSEF 793


>dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 775

 Score =  855 bits (2208), Expect = 0.0
 Identities = 453/714 (63%), Positives = 548/714 (76%), Gaps = 3/714 (0%)
 Frame = -1

Query: 2655 PPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSCEEEEGVD 2476
            P    APW+Q+W P + S + APA      P      SI+RIV+RLRNL L  +++E   
Sbjct: 54   PSRGGAPWMQKWAPADPS-APAPAPSPGHAPST----SIDRIVHRLRNLGLGTDDDEPSS 108

Query: 2475 GDSKETPLSGKERLGELLERTWSRPH---TCQMVDRILLPWEREDDRGFVEEEVTKGEKR 2305
              +   PL G+ERLG+LL+R+W+RP        +D  +LPWER  DR    EEV  G KR
Sbjct: 109  A-AVSAPLDGRERLGDLLDRSWARPDRQFAASGLDEAVLPWER--DRESDGEEVD-GVKR 164

Query: 2304 KRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAGVTQAITEKIHDAWRKSEIVRLK 2125
            KR+RAP+LAELT++D                ITVPKAGVTQAITEKIHDAWRKSE+VRLK
Sbjct: 165  KRVRAPSLAELTMDDVELRRLRGMGMTLKDRITVPKAGVTQAITEKIHDAWRKSELVRLK 224

Query: 2124 FHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSN 1945
            FHED  +DMKTAHELVE RTGGL+IWR+GSVMVVYRGSNY RP ++Q  D  ++      
Sbjct: 225  FHEDHANDMKTAHELVERRTGGLIIWRAGSVMVVYRGSNYTRPLKSQTLDGTSSPR--KQ 282

Query: 1944 ETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAEEEVEFNHLLDGLGP 1765
            E  +LFIP+ S T   VEN +          ++  L+L + +++ EEE+EFN +LD LGP
Sbjct: 283  EDSALFIPNGSST---VENDNQGKDLAAQHDNAPILDLHNTEDMTEEELEFNQMLDELGP 339

Query: 1764 RFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLPCHFA 1585
            RFVDWWGTGILPVDADLLPQ IPG++ PFR+LP+GMR  LTNSE+TNLRKLA+ LPCHFA
Sbjct: 340  RFVDWWGTGILPVDADLLPQTIPGYKAPFRVLPTGMRTSLTNSELTNLRKLARNLPCHFA 399

Query: 1584 LGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRNKYYI 1405
            LGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLM++E+K L GGTLLLRNKYYI
Sbjct: 400  LGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSDEIKNLTGGTLLLRNKYYI 459

Query: 1404 VIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAPVGTLAEFL 1225
            VIYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R  +I     +  EG A VGTLAEF 
Sbjct: 460  VIYRGKDFLPTSVAAALAEREELTKDIQNLEEQRRSISIEHSPEDGFEGHALVGTLAEFQ 519

Query: 1224 EAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIEASMV 1045
            EAQARWGR ++++E+  MKE + R +  KLF+R+EHKLSIAQAK  RA +LL+KIEASMV
Sbjct: 520  EAQARWGRNVTSKEQQEMKEASFRSEKEKLFRRLEHKLSIAQAKIHRAGKLLSKIEASMV 579

Query: 1044 PVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISK 865
              NP +D+E IT EERSVFRRIGL+MKAYLP+GIRGVFDGVIENMHLHWKHRE+VKLI+K
Sbjct: 580  LANPSDDREMITAEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITK 639

Query: 864  QKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTKAKAL 685
            QKTLAFVE TARLLEYESGGILVAIE VPKG+ALI+YRGKNY+RPI++RPRNLLTKAKAL
Sbjct: 640  QKTLAFVEETARLLEYESGGILVAIERVPKGHALIFYRGKNYRRPINIRPRNLLTKAKAL 699

Query: 684  KRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIAATGTNTMQSDDESSF 523
            KRA+A+QRHEALSQHI +LE N++ MK +LG+ + +E    G+++   DD + +
Sbjct: 700  KRAVAMQRHEALSQHIDQLEINMKQMKRDLGMEDYDEEGGDGSDSESEDDTAGY 753


>gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 838

 Score =  843 bits (2179), Expect = 0.0
 Identities = 456/764 (59%), Positives = 553/764 (72%), Gaps = 36/764 (4%)
 Frame = -1

Query: 2706 PWEDNDEDGRLPSGSTN----PPFRSAPWLQQWDPPESS---TSQAPAKRKPKEPDV--- 2557
            PW+D +      S S++    PP  SAPWL +W P ESS    +++  + +   PD    
Sbjct: 58   PWKDQNPKPSSSSSSSSHRHKPP--SAPWLNKWPPVESSDRKVAESTDRDRTDRPDTVGY 115

Query: 2556 ---GRG-GSIERIVYRLRNLELSCEEEE--------GVDGDSKETPLSGKERLGELLERT 2413
                RG  +IERIV RLRNL L  ++E+        G+DG     P++G+E+LG+LL R 
Sbjct: 116  VDRDRGRNAIERIVLRLRNLGLGSDDEDEDDKEGDIGLDGQDA-MPVTGEEKLGDLLRRE 174

Query: 2412 WSRPHTC----QMVDRILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXX 2245
            W RP       +  D + LPWERE++   V+E  T+  +++R+ APTLAELTIED     
Sbjct: 175  WIRPDFVLEEEESKDDLTLPWEREEEEKGVDEG-TRELRKRRVNAPTLAELTIEDEELRR 233

Query: 2244 XXXXXXXXXXXITVPKAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRT 2065
                       I+VPKAG+TQA+ EKIHD WRK E+VRLKFHE L HDMKTAHE+VE RT
Sbjct: 234  LRRMGMFLRDRISVPKAGLTQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRT 293

Query: 2064 GGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENV 1885
            GGLV WRSGSVMVVYRGSNY+ P +TQ          V+ E ++LFIPDVS     +   
Sbjct: 294  GGLVTWRSGSVMVVYRGSNYEGPPKTQP---------VNKERDALFIPDVSSAENFLTRS 344

Query: 1884 DHSVTSKPVTSSSFDLNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQ 1705
              S+TS    S +   N    +N+ EEE EFN LLD LGPRF +WWGTG++PVDADLLP 
Sbjct: 345  GDSLTSNAEKSETPVRNPVSVQNMTEEEAEFNSLLDDLGPRFDEWWGTGVIPVDADLLPP 404

Query: 1704 NIPGFRTPFRLLPSGMRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEK 1525
             IPG++TPFRLLP+GMR+RLTN EMTNLRK+AK LP HFALGRNR+H GLA AI+K+WEK
Sbjct: 405  KIPGYKTPFRLLPTGMRSRLTNGEMTNLRKVAKSLPSHFALGRNRNHQGLAAAIIKLWEK 464

Query: 1524 SLVVKIAVKRGVQNTNNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAER 1345
            SLV KIAVKRG+QNTNNKLMAEELK L GG LLLRNKYYIVIYRGKDF+P +VA  LAER
Sbjct: 465  SLVAKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYYIVIYRGKDFLPTTVAATLAER 524

Query: 1344 EELTKEIQDAEEQLR---------KRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQIS 1192
            ++L K++QD EEQ+R         K+ +        EG A  GTLAEF EAQARWGR+I+
Sbjct: 525  QKLAKQVQDLEEQVRVQDIEQKMQKKAVDSVPSGEEEGQALAGTLAEFYEAQARWGREIT 584

Query: 1191 TEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETI 1012
            +EER+ M EEA+  K  +L KR+EHK ++AQAKK RAE+LL KIEASMVP  P  DQETI
Sbjct: 585  SEEREKMIEEAAVAKHARLVKRIEHKAAVAQAKKLRAEKLLAKIEASMVPAGPDYDQETI 644

Query: 1011 TDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTA 832
            T+EER +FRR+GLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLI+KQKTLAFVE TA
Sbjct: 645  TEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTA 704

Query: 831  RLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEA 652
            RLLEYESGGILVAIE VPKG+ALIYYRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEA
Sbjct: 705  RLLEYESGGILVAIERVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEA 764

Query: 651  LSQHIVELEKNIEVMKEELGISEN-EEIAATGTNTMQSDDESSF 523
            LSQHI ELE  IE M++++  S++ ++  +  T+   +D+ S F
Sbjct: 765  LSQHISELETTIEQMQDKIVASKSGQDEGSWSTDENLNDNVSEF 808


>ref|XP_006655563.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Oryza brachyantha]
          Length = 760

 Score =  841 bits (2172), Expect = 0.0
 Identities = 448/720 (62%), Positives = 530/720 (73%), Gaps = 8/720 (1%)
 Frame = -1

Query: 2670 SGSTNPPF--RSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSC 2497
            SG   PP   RSAPWLQ  D  E +T+ A A   P                         
Sbjct: 52   SGGRAPPAPSRSAPWLQN-DDDEPATATATATAPP------------------------- 85

Query: 2496 EEEEGVDGDSKETPLSGKERLGELLERTWSRPH---TCQMVDRILLPWEREDDRGFVEEE 2326
                            G ERL +LL+R+WSRP         D  +LPWER++      EE
Sbjct: 86   ---------------DGNERLSDLLDRSWSRPDQQFAATSFDESVLPWERDESARSRGEE 130

Query: 2325 VTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAGVTQAITEKIHDAWRK 2146
               G KRKR+RAP+LAELTIED                ITVPKAGVTQA+TEKIHDAWRK
Sbjct: 131  -DDGVKRKRVRAPSLAELTIEDEELRRLRRMGMTLRDRITVPKAGVTQAVTEKIHDAWRK 189

Query: 2145 SEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQN 1966
            SE+VRLKFHEDL HDMKTAHELVE RTGGL+IWRSGSVMVVYRGSNYKRP +++  D   
Sbjct: 190  SELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSEALD--G 247

Query: 1965 NQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSS---SFDLNLKHEKNLAEEEVE 1795
              + V  E  +LFIPD S        ++H    K + +    +  LN+++ +++ E+E+E
Sbjct: 248  TSSAVKGEDGTLFIPDASSP------IEHGNQGKDLNTQREIAARLNMQNAEDMTEDELE 301

Query: 1794 FNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRK 1615
            FN +LD LGPRFVDWWGTGILPVDADLLPQ IPG++TPFRLLP+GMR  LTN+E+TNLRK
Sbjct: 302  FNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRK 361

Query: 1614 LAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGG 1435
            LA+ LPCHFALGRNR+H GLA AI+K+WEKSLVVKIAVKRG+QNTNNKLMAEE+K L GG
Sbjct: 362  LARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMAEEIKNLTGG 421

Query: 1434 TLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGD 1255
            TLLLRNKYYIVIYRGKDF+P SVA ALAEREELTK+IQ+ EEQ R+ +I   + ++ +G 
Sbjct: 422  TLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQRRRISIEHSTDDSLDGH 481

Query: 1254 APVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQ 1075
            A  GTLAEF EAQARWGR+++ +E++ MKE +SR    K FKR+EHKLSIAQAK  RAE+
Sbjct: 482  ALAGTLAEFQEAQARWGREVTVKEQEEMKEASSRSVKEKAFKRLEHKLSIAQAKIHRAER 541

Query: 1074 LLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWK 895
            LL+KIEASMV  NP +DQE ITDEERSVFRRIGLR+KAYLP+GIRGVFDGVIENMHLHWK
Sbjct: 542  LLSKIEASMVLANPSDDQEMITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWK 601

Query: 894  HRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRP 715
            HRE+VKLI+KQKTL FVE TARLL+YESGGILVAIE VPKGYALI+YRGKNY+RPI++RP
Sbjct: 602  HREVVKLITKQKTLPFVEETARLLQYESGGILVAIERVPKGYALIFYRGKNYRRPINIRP 661

Query: 714  RNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIAATGTNTMQSDD 535
            RNLLTKAKALKRA+A+QRHEALS+HI +LE NI  MK +LGI  +EE     +++   D+
Sbjct: 662  RNLLTKAKALKRAVAMQRHEALSEHIAQLESNIREMKLDLGIENDEEYEEDNSDSENEDN 721


>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  840 bits (2171), Expect = 0.0
 Identities = 450/730 (61%), Positives = 533/730 (73%), Gaps = 19/730 (2%)
 Frame = -1

Query: 2706 PWEDNDEDGRLPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDV-------GRG 2548
            PW   D      S +TNP   +  W+ +W  P  S          K  D        GR 
Sbjct: 57   PW---DHQNSRKSSNTNPNSSTKSWINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRS 113

Query: 2547 GS--IERIVYRLRNLELSCEEEEGVDGDSKE---TPLSGKERLGELLERTWSRPHTCQMV 2383
            G+  IERIV RLRNL L  ++E+  +G+ +     P++G E+LG+LL+R W RP +  + 
Sbjct: 114  GTSAIERIVLRLRNLGLGSDDEDKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIE 173

Query: 2382 DR----ILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXX 2215
            D     ++LPWER ++R   EEE     KR+ +RAPTLAELTIED               
Sbjct: 174  DEDEDDMILPWERGEERQ--EEEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRE 231

Query: 2214 XITVPKAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGS 2035
             I VPKAG+TQA+  KIH+ WRK E+VRLKFHE L HDMKTAHE+VE RTGGLV WRSGS
Sbjct: 232  RINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGS 291

Query: 2034 VMVVYRGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVT 1855
            VMVV+RG+NY+ P + Q  D          E +SLF+PDVS         D++       
Sbjct: 292  VMVVFRGTNYEGPPKPQPVD---------GEGDSLFVPDVSSVDNPAMRNDNNGGPTLEK 342

Query: 1854 SSSFDLNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFR 1675
             S    N  H +N+ EEE E+N LLDGLGPRFVDWWGTG+LPVD DLLPQ+IPG++TP R
Sbjct: 343  GSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLR 402

Query: 1674 LLPSGMRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKR 1495
            +LP+GMR RLTN+EMTNLRKLAK LPCHFALGRNR+H GLA AI+K+WEKS+VVKIAVK 
Sbjct: 403  ILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKP 462

Query: 1494 GVQNTNNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDA 1315
            G+QNTNNKLMAEE+K L GG LLLRNKYYIVIYRGKDF+P SVA AL+EREELTK IQ  
Sbjct: 463  GIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVV 522

Query: 1314 EEQLRKRTIGEPSVNAPE---GDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKT 1144
            EE++R  T G  ++ + E   G    GTLAEF EAQARWGR+IS EE + M EEASR K+
Sbjct: 523  EEKVR--TGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKS 580

Query: 1143 TKLFKRVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMK 964
             ++ KR+EHKL++AQAKK RAE+LL KIEASM+P  P +DQETITDEER +FRR+GLRMK
Sbjct: 581  ARVVKRIEHKLALAQAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMK 640

Query: 963  AYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEP 784
            AYL LG+RGVFDGVIENMHLHWKHRELVKLISKQKTLAFVE TARLLEYESGGILVAIE 
Sbjct: 641  AYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIER 700

Query: 783  VPKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMK 604
            VPKGYALIYYRGKNY+RP+SLRPRNLLTKAKALKR++A+QRHEALSQHI ELE+ IE MK
Sbjct: 701  VPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMK 760

Query: 603  EELGISENEE 574
             E+G S++ E
Sbjct: 761  MEIGDSKDAE 770


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  838 bits (2166), Expect = 0.0
 Identities = 449/730 (61%), Positives = 532/730 (72%), Gaps = 19/730 (2%)
 Frame = -1

Query: 2706 PWEDNDEDGRLPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDV-------GRG 2548
            PW   D      S +TNP   +  W+ +W  P  S          K  D        GR 
Sbjct: 57   PW---DHQNSRKSSNTNPNSSTKSWINKWPSPNPSIESEHKGIDSKGRDGTESRYFDGRS 113

Query: 2547 GS--IERIVYRLRNLELSCEEEEGVDGDSKE---TPLSGKERLGELLERTWSRPHTCQMV 2383
            G+  IERIV RLRNL L  ++E+  +G+ +     P++G E+LG+LL+R W RP +  + 
Sbjct: 114  GTSAIERIVLRLRNLGLGSDDEDKNEGEVESGDTMPVTGDEKLGDLLQRDWVRPDSMLIE 173

Query: 2382 DR----ILLPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXX 2215
            D     ++LPWER ++R   EEE     KR+ +RAPTLAELTIED               
Sbjct: 174  DEDEDDMILPWERGEERQ--EEEGDGRLKRRAVRAPTLAELTIEDEELRRLRRLGMTIRE 231

Query: 2214 XITVPKAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGS 2035
             I VPKAG+TQA+  KIH+ WRK E+VRLKFHE L HDMKTAHE+VE RTGGLV WRSGS
Sbjct: 232  RINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHEIVERRTGGLVTWRSGS 291

Query: 2034 VMVVYRGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVT 1855
            VMVV+RG+NY+ P + Q  D          E +SLF+PDVS         D++       
Sbjct: 292  VMVVFRGTNYEGPPKPQPVD---------GEGDSLFVPDVSSVDNPAMRNDNNGGPTLEK 342

Query: 1854 SSSFDLNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFR 1675
             S    N  H +N+ EEE E+N LLDGLGPRFVDWWGTG+LPVD DLLPQ+IPG++TP R
Sbjct: 343  GSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSIPGYKTPLR 402

Query: 1674 LLPSGMRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKR 1495
            +LP+GMR RLTN+EMTNLRKLAK LPCHFALGRNR+H GLA AI+K+WEKS+VVKIAVK 
Sbjct: 403  ILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSIVVKIAVKP 462

Query: 1494 GVQNTNNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDA 1315
            G+QNTNNKLMAEE+K L GG LLLRNKYYIVIYRGKDF+P SVA AL+EREELTK IQ  
Sbjct: 463  GIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREELTKHIQVV 522

Query: 1314 EEQLRKRTIGEPSVNAPE---GDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKT 1144
            EE++R  T G  ++ + E   G    GTLAEF EAQARWGR+IS EE + M EEASR K+
Sbjct: 523  EEKVR--TGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEEASRAKS 580

Query: 1143 TKLFKRVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMK 964
             ++ KR+EHKL++AQAKK R E+LL KIEASM+P  P +DQETITDEER +FRR+GLRMK
Sbjct: 581  ARVVKRIEHKLALAQAKKLRPERLLAKIEASMIPAGPSDDQETITDEERFMFRRLGLRMK 640

Query: 963  AYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEP 784
            AYL LG+RGVFDGVIENMHLHWKHRELVKLISKQKTLAFVE TARLLEYESGGILVAIE 
Sbjct: 641  AYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGILVAIER 700

Query: 783  VPKGYALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMK 604
            VPKGYALIYYRGKNY+RP+SLRPRNLLTKAKALKR++A+QRHEALSQHI ELE+ IE MK
Sbjct: 701  VPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEQMK 760

Query: 603  EELGISENEE 574
             E+G S++ E
Sbjct: 761  MEIGDSKDAE 770


>ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Populus trichocarpa]
            gi|550326426|gb|EEE96133.2| hypothetical protein
            POPTR_0012s05260g [Populus trichocarpa]
          Length = 807

 Score =  838 bits (2165), Expect = 0.0
 Identities = 442/705 (62%), Positives = 528/705 (74%), Gaps = 18/705 (2%)
 Frame = -1

Query: 2634 WLQQWDPPESSTSQAP----AKRKPKEPDVGRG-GSIERIVYRLRNLELSCEEEEGVDG- 2473
            W+ +W P ++ + + P    ++ KP      +G  +IERIV RLRNL L  ++E+ ++G 
Sbjct: 64   WISKWKPSQNHSIKNPPSEVSQEKPHYFSNDKGQNAIERIVLRLRNLGLGSDDEDELEGL 123

Query: 2472 ---DSKETPLSGKERLGELLERTWSRPHTCQMV-------DRILLPWEREDDRGFVEEE- 2326
               +     L+G+ERLG+LL+R W RP T           D  +LPWERE+ RG VE E 
Sbjct: 124  EGSEINGGGLTGEERLGDLLKREWVRPDTVVFSNDEGSDSDESVLPWEREE-RGAVEMEG 182

Query: 2325 -VTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAGVTQAITEKIHDAWR 2149
             +  G KR R +APTLAELTIED                I++PKAG+T A+ E IHD WR
Sbjct: 183  GIESGRKR-RGKAPTLAELTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIHDRWR 241

Query: 2148 KSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRTQLPDVQ 1969
            K E+VRLKFHE L HDMKTAHE+VE RTGGLVIWR+GSVMVV+RG+NY+ P     P   
Sbjct: 242  KEELVRLKFHEVLAHDMKTAHEIVERRTGGLVIWRAGSVMVVFRGTNYQGPPSKLQP--- 298

Query: 1968 NNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAEEEVEFN 1789
                    E ++LF+PDVS T +++    +  TS    S       +  +N+ EEE E N
Sbjct: 299  -----ADREGDALFVPDVSSTDSVMTRSSNIATSSSEKSKLVMRITEPTENMTEEEAELN 353

Query: 1788 HLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMTNLRKLA 1609
             LLD LGPRF +WWGTG+LPVDADLLP  +P ++TPFRLLP GMRARLTN+EMTN+RKLA
Sbjct: 354  SLLDDLGPRFEEWWGTGLLPVDADLLPPKVPCYKTPFRLLPVGMRARLTNAEMTNMRKLA 413

Query: 1608 KRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKALIGGTL 1429
            K LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNTNNKLMA+ELK L GG L
Sbjct: 414  KALPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMADELKMLTGGVL 473

Query: 1428 LLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNAPEGDAP 1249
            LLRNKYYIVI+RGKDF+P SVA ALAER+E+TK+IQD EE++R  ++        EG A 
Sbjct: 474  LLRNKYYIVIFRGKDFLPQSVAAALAERQEVTKQIQDVEERVRSNSVEAAPSGEDEGKAL 533

Query: 1248 VGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKARAEQLL 1069
             GTLAEF EAQARWGR ISTEER+ M EEAS+ KT +L KR EHKL+IAQAKK RAE LL
Sbjct: 534  AGTLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAESLL 593

Query: 1068 TKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHR 889
            +KIE +MVP  P  DQETI++EER +FRR+GLRMKAYLPLGIRGVFDGVIENMHLHWKHR
Sbjct: 594  SKIETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHR 653

Query: 888  ELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPISLRPRN 709
            ELVKLISKQKTLAFVE TA+LLEYESGG+LVAIE VPKG+ALIYYRGKNY+RPIS+RPRN
Sbjct: 654  ELVKLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKGFALIYYRGKNYRRPISIRPRN 713

Query: 708  LLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEE 574
            LLTKAKALKR++A+QRHEALSQHI ELEKNIE M +E+G+S+ EE
Sbjct: 714  LLTKAKALKRSVAMQRHEALSQHIFELEKNIEEMVKEMGLSKEEE 758


>ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [Amborella trichopoda]
            gi|548844363|gb|ERN03972.1| hypothetical protein
            AMTR_s00079p00107040 [Amborella trichopoda]
          Length = 826

 Score =  832 bits (2149), Expect = 0.0
 Identities = 454/746 (60%), Positives = 544/746 (72%), Gaps = 29/746 (3%)
 Frame = -1

Query: 2670 SGSTNP-PFRSAP---WLQQW---DP---PESSTSQAPAKRKPKEPDVGRGGSIERIVYR 2521
            S + NP PF   P   WL +W   DP   P S TS    + +  + D GR  +I RIV R
Sbjct: 53   SSNPNPKPFPKNPPSSWLNKWTQSDPSSNPNSRTSSEEDRVQYFDGDKGRS-AIHRIVDR 111

Query: 2520 LRNLELSCEEEEGVDGDSKETPLSGKER-------LGELLERTWSRPHTCQMVDRI---L 2371
            LRNL LS  + +G D DSK+ P   +E+       LG LL++TW RP      DRI   L
Sbjct: 112  LRNLGLS--DGDG-DDDSKDLPWGSREKGNLDDKDLGFLLQKTWERPDQVVNGDRISDAL 168

Query: 2370 LPWEREDDRGFVEEEVTKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAG 2191
            LPWER ++     E  TK EK +R++APTLAELTIEDS               I VPKAG
Sbjct: 169  LPWERSEEG----EYETKKEKSRRIKAPTLAELTIEDSELRRLRKLGITLRERINVPKAG 224

Query: 2190 VTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGS 2011
            VTQA+ EKIH AWRKSE+VRLKFHE LVHDMKTAHE+VE RTGGLVIW SGSVMVVYRGS
Sbjct: 225  VTQAVLEKIHMAWRKSELVRLKFHETLVHDMKTAHEIVERRTGGLVIWMSGSVMVVYRGS 284

Query: 2010 NYKRPSRTQLPDVQNNQTLVSN---ETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 1840
             Y +   ++ P+    + + +N   E ++LF+PDV+ +  + E+   +        S F 
Sbjct: 285  TYGQQPSSR-PNTSEEEVIATNLVHEGDTLFVPDVAHSEKIPESARKNSIITAEKPSLFS 343

Query: 1839 LNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1660
            ++      L EEE E+N +LDGLGPRFV+WWGTG LPVDADLLPQ +PG++ PFRLLP G
Sbjct: 344  VD--EVPTLTEEEKEYNSILDGLGPRFVEWWGTGFLPVDADLLPQKVPGYKPPFRLLPIG 401

Query: 1659 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1480
            MR+RLTN+EMTNLRK A++LP HFALGRNR+H G+A AI+K+WE+SL+VKIAVKRG+QNT
Sbjct: 402  MRSRLTNAEMTNLRKFARKLPSHFALGRNRNHQGMAAAIIKLWERSLIVKIAVKRGIQNT 461

Query: 1479 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1300
            NNKLMAEELK L GG LLLRNKYYIVIYRGKDF+P SVA+ALAER+ LTK IQD EE+ R
Sbjct: 462  NNKLMAEELKKLTGGILLLRNKYYIVIYRGKDFLPPSVASALAERQALTKNIQDEEERAR 521

Query: 1299 KRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVE 1120
            K  IG       + +   GTLAEF EAQARWGR+I+ EE++ MKEE S+ K   L +R+E
Sbjct: 522  KGAIGAAEAELEKQEVLAGTLAEFKEAQARWGREIAAEEQEKMKEEISKAKHAGLVRRIE 581

Query: 1119 HKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIR 940
            HK ++AQAKK RAE+ L+KIEASMVPV P +DQET+TDEER +FRR+GLRMKAYLPLGIR
Sbjct: 582  HKFAVAQAKKLRAEKQLSKIEASMVPVGPSDDQETVTDEERYMFRRVGLRMKAYLPLGIR 641

Query: 939  GVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALI 760
            GVFDGVIENMHLHWKHRELVKLISKQKTLAFVE TARLLEYESGGIL+AIE VPKGYALI
Sbjct: 642  GVFDGVIENMHLHWKHRELVKLISKQKTLAFVEETARLLEYESGGILIAIERVPKGYALI 701

Query: 759  YYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISEN 580
            YYRGKNYQRP+++RPRNLLTKAKALKR++ +QRHEALSQHI+ELE+ IE MK EL   E 
Sbjct: 702  YYRGKNYQRPVTIRPRNLLTKAKALKRSVEMQRHEALSQHILELERTIEHMKLELHNPEI 761

Query: 579  EEIAA------TGTNTMQSDDESSFQ 520
             E ++       G N    +D S ++
Sbjct: 762  NEGSSWESEENEGNNEYDDEDGSRWE 787


>ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 791

 Score =  823 bits (2126), Expect = 0.0
 Identities = 431/730 (59%), Positives = 533/730 (73%), Gaps = 10/730 (1%)
 Frame = -1

Query: 2676 LPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSC 2497
            LP+   NP   SAPWL +   P+ +T   P       PD      +ERIV RLRNL L  
Sbjct: 43   LPTPKPNP---SAPWLTKSPSPKRATE--PLTAGDPIPDKKPHNPVERIVLRLRNLGLPS 97

Query: 2496 EEEEGVDGD----SKETPLSGKERLGELLERTWSRPHTCQM-----VDRILLPWEREDDR 2344
            EEEE  + +    +   P++G+ERLGELL R W RP    +      + ++LPWERE+++
Sbjct: 98   EEEEQEEEEEIPANNPAPVTGEERLGELLRREWVRPDAVLVGEDDGEEEMILPWEREEEK 157

Query: 2343 GFVEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAGVTQAITEK 2167
              V     +G  K++R+RAP+LA+LT+ED                ++VPKAG+TQ + EK
Sbjct: 158  EVVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTQEVMEK 217

Query: 2166 IHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRPSRT 1987
            IH  WRK E+VRLKFHE+L  DM+ AHE+VE RTGGLV WRSGSVM+VYRG +Y+ P   
Sbjct: 218  IHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPD-- 275

Query: 1986 QLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKNLAE 1807
                  + + +   + +  F+PDVS+          + TS    S       +H +N++E
Sbjct: 276  ------SQKEVNEKKGDGFFVPDVSKRED-----SSTATSTSEKSEVVVREREHPENMSE 324

Query: 1806 EEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNSEMT 1627
             E E+N LLDGLGPRFV WWGTGILPVDADLLP+ +PG++TPFRLLP+GMR+RLTN+EMT
Sbjct: 325  AEAEYNALLDGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMT 384

Query: 1626 NLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEELKA 1447
            NLRKLAK LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNTNN+LMAEELK 
Sbjct: 385  NLRKLAKSLPCHFALGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEELKM 444

Query: 1446 LIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPSVNA 1267
            L GGTLLLRNKY+IVIYRGKDF+P SVA  LAEREELTK++QD E+++R R +    +  
Sbjct: 445  LTGGTLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPLGQ 504

Query: 1266 PEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQAKKA 1087
             E  A  GTLAEF EAQARWGR+IS EER+ M EEA++ KT KL +++EHK+ IAQ KK 
Sbjct: 505  GEATAQAGTLAEFYEAQARWGREISPEEREKMVEEAAKTKTAKLVRQIEHKIFIAQTKKL 564

Query: 1086 RAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMH 907
            RAE+LL KIEASMVP  P  DQETITDEER +FR++GLRMK YLPLGIRGVFDGV+ENMH
Sbjct: 565  RAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMH 624

Query: 906  LHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQRPI 727
            LHWKHRELVKL++KQKT+AFVE TARLLEYESGGILVAIE V K +ALIYYRGKNY+RPI
Sbjct: 625  LHWKHRELVKLMTKQKTVAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPI 684

Query: 726  SLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIAATGTNTM 547
            +LRPRNLLTK KALKR +A+QRHEALSQHI ELEK IE MK+ELG++++ ++   G  ++
Sbjct: 685  TLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKELGMTQDSDVEDGG--SI 742

Query: 546  QSDDESSFQM 517
            + DD +   +
Sbjct: 743  EEDDHNQIDI 752


>ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|567896982|ref|XP_006440979.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|567896984|ref|XP_006440980.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543240|gb|ESR54218.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543241|gb|ESR54219.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543242|gb|ESR54220.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 833

 Score =  820 bits (2118), Expect = 0.0
 Identities = 437/722 (60%), Positives = 526/722 (72%), Gaps = 29/722 (4%)
 Frame = -1

Query: 2652 PFRSAPWLQQWDPPESSTSQAPAK--------RKPKEPDV----------GRGGSIERIV 2527
            P  SAPWL  W  P+  +++   K         K   PD           GR  +IERIV
Sbjct: 72   PSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRN-AIERIV 130

Query: 2526 YRLRNLELSCEEEEGVDGDSKETPLS----GKERLGELLERTWSRPHTCQMV-----DRI 2374
             RLRNL L  ++EE  +G+ +E  ++    G+ERL +LL R W RP+T         D  
Sbjct: 131  LRLRNLGLGSDDEE--EGEEEEDDINDAATGEERLEDLLRREWVRPNTVLREVEGEEDDS 188

Query: 2373 LLPWEREDDRGF-VEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVP 2200
            LLPWERE++       E   GE +R+R++APTLAELTIED                I VP
Sbjct: 189  LLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVP 248

Query: 2199 KAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVY 2020
            KAG+TQ +  KIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLVIWR+GSVMVVY
Sbjct: 249  KAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308

Query: 2019 RGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 1840
            RGSNY  PS    P        +  + ++LF+P VS T           +  PV      
Sbjct: 309  RGSNYAGPSSKPQP--------IDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRI---- 356

Query: 1839 LNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1660
              L H K + EEE E N LLD LGPRF +WWGTGILPVDADLLP  + G++TPFRLLP+G
Sbjct: 357  --LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTG 414

Query: 1659 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1480
            MR+RLTN+EMT+LR+LA+ LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNT
Sbjct: 415  MRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNT 474

Query: 1479 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1300
            NNKLMAEELK+L GGTLL RNK+YIV+YRGKDF+P +VA+ALAERE+  K+IQD EE++R
Sbjct: 475  NNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR 534

Query: 1299 KRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVE 1120
             +T+        EG AP GTLAEF EAQ RWGR++S EER+ M EEAS+ K  +L KR+E
Sbjct: 535  SKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHGRLVKRIE 594

Query: 1119 HKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIR 940
            HKL+++QAKK RAE+LL KIEASMVP  P  DQETITDEER++FRR+GLRMKA+LPLGIR
Sbjct: 595  HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654

Query: 939  GVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALI 760
            GVFDGV+ENMHLHWK+RELVKLI+KQKTLA+VE TARLLEYES GIL+AIE VPKG+ALI
Sbjct: 655  GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESVGILIAIERVPKGFALI 714

Query: 759  YYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISEN 580
            +YRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEALSQHI +LE  IE MK+E+G+S++
Sbjct: 715  FYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKD 774

Query: 579  EE 574
            EE
Sbjct: 775  EE 776


>ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 791

 Score =  818 bits (2113), Expect = 0.0
 Identities = 429/733 (58%), Positives = 532/733 (72%), Gaps = 13/733 (1%)
 Frame = -1

Query: 2676 LPSGSTNPPFRSAPWLQQWDPPESSTSQAPAKRKPKEPDVGRGGSIERIVYRLRNLELSC 2497
            LP+   NP   SAPWL +   P+ +    PA      PD     +++RIV RLRNL L  
Sbjct: 41   LPTPKPNP---SAPWLTKSPSPKRAVEPLPAG--DPTPDRKPQNAVDRIVLRLRNLGLPS 95

Query: 2496 EEEEGVDGDSKE------TPLSGKERLGELLERTWSRPHTCQM------VDRILLPWERE 2353
            EEEE      +E       P++G+ERLGELL+R W RP    +       + ++LPWER+
Sbjct: 96   EEEEQEQEHEEEIPATNPAPVTGEERLGELLQREWVRPDAVLVGEDDDEEEEMMLPWERD 155

Query: 2352 DDRGFVEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPKAGVTQAI 2176
            ++   V     +G  K++R+RAP+LA+LT+ED                ++VPKAG+T+ +
Sbjct: 156  EEEKEVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTEEV 215

Query: 2175 TEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYRGSNYKRP 1996
             EKIH  WRK E+VRLKFHE+L  DM+ AHE+VE RTGGLV WRSGSVM+VYRG +Y+ P
Sbjct: 216  MEKIHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGP 275

Query: 1995 SRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDLNLKHEKN 1816
                     + + L   + +  F+PDVS+        D + TS    S       +H +N
Sbjct: 276  D--------SRKELNEKKGDGFFVPDVSKRE------DSTATSTSEKSEVVVREREHPEN 321

Query: 1815 LAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGMRARLTNS 1636
            ++E E E+N LLDGLGPRF  WWGTGILPVDADLLP+ +PG++TPFRLLP+GMR+RLTN+
Sbjct: 322  MSEAEAEYNALLDGLGPRFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNA 381

Query: 1635 EMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTNNKLMAEE 1456
            EMTNLRKLAK LPCHFA+GRNR+H GLA AILK+WEKSLV KIAVKRG+QNTNN+LMAEE
Sbjct: 382  EMTNLRKLAKSLPCHFAVGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELMAEE 441

Query: 1455 LKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRKRTIGEPS 1276
            LK L GGTLLLRNKY+IVIYRGKDF+P SVA  LAEREELTK++QD E+++R R +    
Sbjct: 442  LKMLTGGTLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIP 501

Query: 1275 VNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEHKLSIAQA 1096
                E  A  GTLAEF EAQARWGR+IS +ER+ M EEA++ KT KL +++EHK+ IAQ 
Sbjct: 502  SGQGEATAQAGTLAEFYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFIAQT 561

Query: 1095 KKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIE 916
            KK RAE+LL KIEASMVP  P  DQETITDEER +FR++GLRMK YLPLGIRGVFDGV+E
Sbjct: 562  KKLRAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVE 621

Query: 915  NMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIYYRGKNYQ 736
            NMHLHWKHRELVKL++KQKTLAFVE TARLLEYESGGILVAIE V K +ALIYYRGKNY+
Sbjct: 622  NMHLHWKHRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYK 681

Query: 735  RPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENEEIAATGT 556
            RPI+LRPRNLLTK KALKR +A+QRHEALSQHI ELEK IE MK+ELG++++ ++   G 
Sbjct: 682  RPITLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKELGMTQDSDVEDGG- 740

Query: 555  NTMQSDDESSFQM 517
             +++ DD +   +
Sbjct: 741  -SIEEDDHNQIDI 752


>ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 837

 Score =  817 bits (2110), Expect = 0.0
 Identities = 434/721 (60%), Positives = 525/721 (72%), Gaps = 28/721 (3%)
 Frame = -1

Query: 2652 PFRSAPWLQQWDPPESSTSQAPAKRK---------------PKEPDVGRGG--SIERIVY 2524
            P  SAPWL  W  P+  +++   K                 P+  D    G  +IERIV 
Sbjct: 72   PSTSAPWLNNWSRPKPPSTENVNKSDGRNQIDEKQTAPDSYPRYSDSDNKGRNAIERIVL 131

Query: 2523 RLRNLELSCEEEEGVDGDSKETPLSG----KERLGELLERTWSRPHTCQMV-----DRIL 2371
            RLRNL L  ++EE  +G+ +E  ++G    +ERL +LL R W RP+T         D  L
Sbjct: 132  RLRNLGLGSDDEE--EGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGEEDDSL 189

Query: 2370 LPWEREDDRGF-VEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVPK 2197
            LPWERE++       E   GE +R+R++APTLAELTIED                I VPK
Sbjct: 190  LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249

Query: 2196 AGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVYR 2017
            AG+TQ +  KIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLVIWR+GSVMVVY+
Sbjct: 250  AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYQ 309

Query: 2016 GSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFDL 1837
            GSNY  PS    P   +       + ++LF+P VS T           +  PV       
Sbjct: 310  GSNYAGPSSKPQPLDGDGD----GDGDTLFVPHVSSTDGSTARSVDEKSEVPVRI----- 360

Query: 1836 NLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSGM 1657
             L H K + EEE E N LLD LGPRF +WWGTGILPVDADLLP  + G++TPFRLLP+GM
Sbjct: 361  -LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGM 419

Query: 1656 RARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNTN 1477
            R+RLTN+EMT+LR+LA+ LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNTN
Sbjct: 420  RSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 479

Query: 1476 NKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLRK 1297
            NKLMAEELK+L GGTLL RNK+YIV+YRGKDF+P +VA+ALAERE+  K+IQD EE++R 
Sbjct: 480  NKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRS 539

Query: 1296 RTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVEH 1117
            +T+        EG AP GTLAEF EAQ RWGR++S EER+ M EEAS+ K  +L KR+EH
Sbjct: 540  KTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEH 599

Query: 1116 KLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIRG 937
            KL+++QAKK RAE+LL KIEASMVP  P  DQETITDEER++FRR+GLRMKA+LPLGIRG
Sbjct: 600  KLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRG 659

Query: 936  VFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALIY 757
            VFDGV+ENMHLHWK+RELVKLI+KQKTLA+VE TARLLEYESGGIL+AIE VPKG+ALI+
Sbjct: 660  VFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIF 719

Query: 756  YRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGISENE 577
            YRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEALSQHI +LE  IE MK+E+G+ ++E
Sbjct: 720  YRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVFKDE 779

Query: 576  E 574
            E
Sbjct: 780  E 780


>ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|557543243|gb|ESR54221.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 806

 Score =  810 bits (2093), Expect = 0.0
 Identities = 433/715 (60%), Positives = 519/715 (72%), Gaps = 29/715 (4%)
 Frame = -1

Query: 2652 PFRSAPWLQQWDPPESSTSQAPAK--------RKPKEPDV----------GRGGSIERIV 2527
            P  SAPWL  W  P+  +++   K         K   PD           GR  +IERIV
Sbjct: 72   PSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRN-AIERIV 130

Query: 2526 YRLRNLELSCEEEEGVDGDSKETPLS----GKERLGELLERTWSRPHTCQMV-----DRI 2374
             RLRNL L  ++EE  +G+ +E  ++    G+ERL +LL R W RP+T         D  
Sbjct: 131  LRLRNLGLGSDDEE--EGEEEEDDINDAATGEERLEDLLRREWVRPNTVLREVEGEEDDS 188

Query: 2373 LLPWEREDDRGF-VEEEVTKGE-KRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVP 2200
            LLPWERE++       E   GE +R+R++APTLAELTIED                I VP
Sbjct: 189  LLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVP 248

Query: 2199 KAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVY 2020
            KAG+TQ +  KIHD WRK E+VRLKFHE L  DMKTAHE+VE RTGGLVIWR+GSVMVVY
Sbjct: 249  KAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308

Query: 2019 RGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 1840
            RGSNY  PS    P        +  + ++LF+P VS T           +  PV      
Sbjct: 309  RGSNYAGPSSKPQP--------IDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRI---- 356

Query: 1839 LNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1660
              L H K + EEE E N LLD LGPRF +WWGTGILPVDADLLP  + G++TPFRLLP+G
Sbjct: 357  --LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTG 414

Query: 1659 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1480
            MR+RLTN+EMT+LR+LA+ LPCHFALGRNR+H GLA AILK+WEKSLV KIAVKRG+QNT
Sbjct: 415  MRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNT 474

Query: 1479 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1300
            NNKLMAEELK+L GGTLL RNK+YIV+YRGKDF+P +VA+ALAERE+  K+IQD EE++R
Sbjct: 475  NNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR 534

Query: 1299 KRTIGEPSVNAPEGDAPVGTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFKRVE 1120
             +T+        EG AP GTLAEF EAQ RWGR++S EER+ M EEAS+ K  +L KR+E
Sbjct: 535  SKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHGRLVKRIE 594

Query: 1119 HKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPLGIR 940
            HKL+++QAKK RAE+LL KIEASMVP  P  DQETITDEER++FRR+GLRMKA+LPLGIR
Sbjct: 595  HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654

Query: 939  GVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGYALI 760
            GVFDGV+ENMHLHWK+RELVKLI+KQKTLA+VE TARLLEYES GIL+AIE VPKG+ALI
Sbjct: 655  GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESVGILIAIERVPKGFALI 714

Query: 759  YYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEEL 595
            +YRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEALSQHI +LE  IE MK+E+
Sbjct: 715  FYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769


>ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 809

 Score =  810 bits (2091), Expect = 0.0
 Identities = 435/749 (58%), Positives = 542/749 (72%), Gaps = 33/749 (4%)
 Frame = -1

Query: 2673 PSGSTNPPFRSAPWLQQWDPPESSTSQAPAKR----------KPKEPDVGRGGSIERIVY 2524
            P  ++NP   + PWL          +++P K           KPK P       +ERIV+
Sbjct: 59   PKSNSNP---TPPWLSS----PKRVTESPIKNESLNLQHDNNKPKNP-------VERIVF 104

Query: 2523 RLRNLELSCEEEEGVDGDSK----ETPLSGKERLGELLERTWSRPHTC-----QMVDRIL 2371
            RLRNL L+ EE E    + +    E P+SG E+L ELL+R W RP        +  D ++
Sbjct: 105  RLRNLGLAEEEGEKEQQEEEVEVSELPVSGDEKLSELLKRKWVRPDALLDDEDKEEDEMV 164

Query: 2370 LPWEREDDRGFVEEEV---TKGEKRKRLRAPTLAELTIEDSXXXXXXXXXXXXXXXITVP 2200
            LPW+RE++R     +V    +G K++ ++AP+LAELT+ED                ++VP
Sbjct: 165  LPWKREEEREMGGGDVGIDEEGLKKRTIKAPSLAELTLEDELLRRLRREGMRVRERVSVP 224

Query: 2199 KAGVTQAITEKIHDAWRKSEIVRLKFHEDLVHDMKTAHELVESRTGGLVIWRSGSVMVVY 2020
            KAG+TQ + EKIH+ WRK E+VRLKFHE+L  +M+ AHE+VE RTGGLV WR+GSVM+VY
Sbjct: 225  KAGLTQEVMEKIHERWRKEELVRLKFHEELAKNMRVAHEIVERRTGGLVTWRAGSVMMVY 284

Query: 2019 RGSNYKRPSRTQLPDVQNNQTLVSNETESLFIPDVSETTTLVENVDHSVTSKPVTSSSFD 1840
            RG NY+ P+        +++ L + E +  F+PDVS  ++     D S T+    S+   
Sbjct: 285  RGKNYQGPN--------SSKELDAKEGDGFFVPDVSSKSSS-RTKDSSTTASLKNSAQVR 335

Query: 1839 LNLKHEKNLAEEEVEFNHLLDGLGPRFVDWWGTGILPVDADLLPQNIPGFRTPFRLLPSG 1660
             N +  +N+ +EE E+N LLDGLGPRF +WWGTGILPVDADLLP++IPG++TP+RLLP+G
Sbjct: 336  RNDEQPENMTKEEAEYNALLDGLGPRFFEWWGTGILPVDADLLPRDIPGYKTPYRLLPTG 395

Query: 1659 MRARLTNSEMTNLRKLAKRLPCHFALGRNRHHHGLADAILKIWEKSLVVKIAVKRGVQNT 1480
            MR+RLT++E+T+LRK+AK LPCHFALGRNR+H GLA AILK+WEKSL+ KIAVK G+QNT
Sbjct: 396  MRSRLTSAEITDLRKIAKSLPCHFALGRNRYHQGLACAILKLWEKSLIAKIAVKPGIQNT 455

Query: 1479 NNKLMAEELKALIGGTLLLRNKYYIVIYRGKDFIPASVATALAEREELTKEIQDAEEQLR 1300
            NNKLMA+EL  L GGTLLLR+KYYIVIYRGKDF+P  VA  LAER+ELTKE+QD EE++R
Sbjct: 456  NNKLMADELVTLTGGTLLLRDKYYIVIYRGKDFVPTGVAAVLAERQELTKEVQDVEEKVR 515

Query: 1299 -KRTIGEPSVNAPEGDAPV--GTLAEFLEAQARWGRQISTEERDAMKEEASRYKTTKLFK 1129
             K  +  PS    +G+A V  GTLAEF EAQARWGR ISTEER+ M EEA++ K+ KL K
Sbjct: 516  CKAVVATPS---GQGEATVLAGTLAEFYEAQARWGRDISTEERERMIEEAAKAKSVKLVK 572

Query: 1128 RVEHKLSIAQAKKARAEQLLTKIEASMVPVNPCEDQETITDEERSVFRRIGLRMKAYLPL 949
            ++EH+LS+AQ KK RAE+LL KIE SMVPV P  DQETITDEER+VFRRIGLRMK YLPL
Sbjct: 573  QIEHRLSLAQTKKIRAEKLLAKIEVSMVPVGPDYDQETITDEERAVFRRIGLRMKPYLPL 632

Query: 948  GIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVESTARLLEYESGGILVAIEPVPKGY 769
            GIRGVFDGVIENMHLHWKHRELVKLI+KQK LAFVE TARLLEYESGGILVAIE V K +
Sbjct: 633  GIRGVFDGVIENMHLHWKHRELVKLITKQKNLAFVEDTARLLEYESGGILVAIEKVSKEF 692

Query: 768  ALIYYRGKNYQRPISLRPRNLLTKAKALKRAIAIQRHEALSQHIVELEKNIEVMKEELGI 589
            ALIYYRGKNY+RPISLRPRNLLTKAKALKR++A+QRHEALS HI ELE  IE MK+E+G+
Sbjct: 693  ALIYYRGKNYKRPISLRPRNLLTKAKALKRSVAMQRHEALSNHITELETTIEQMKQEIGL 752

Query: 588  SENEEIAATG--------TNTMQSDDESS 526
            S++E     G        +   QS+DE S
Sbjct: 753  SDDEWSMKEGHENQLDHNSEFTQSEDEDS 781