BLASTX nr result
ID: Zingiber25_contig00009638
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber25_contig00009638 (1771 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 563 e-158 ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 563 e-158 ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 563 e-157 ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 555 e-155 ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 553 e-154 ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 523 e-146 gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 519 e-144 gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 518 e-144 ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 511 e-142 ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 500 e-139 gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 495 e-137 ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 490 e-136 ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 489 e-135 ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 488 e-135 ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 484 e-134 emb|CBI16226.3| unnamed protein product [Vitis vinifera] 472 e-130 ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 471 e-130 ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 469 e-129 ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III s... 460 e-127 tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family... 459 e-126 >gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group] Length = 1321 Score = 563 bits (1452), Expect = e-158 Identities = 293/442 (66%), Positives = 351/442 (79%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 D+L++HD S + GCS F +LL+ F+ R +TR++L LDE V + S+ E+I A Sbjct: 881 DKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAA 940 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 NISGIS +QL+VFL+TC+SRYH KK+E GEPGTQMTLKTFHFAGVA+M Sbjct: 941 NISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1000 Query: 1410 NVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVL 1231 NVTLGVPRIKEIINAAK ISTPIITA L ++ +V+ AR+VK S+EK LGEVA+A+KIVL Sbjct: 1001 NVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVL 1060 Query: 1230 GSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPEV 1051 S QP + +KLDM IEALHMG+SA+SV+ SILNHPKIKLK EHV KL+IY + Sbjct: 1061 KSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGI 1120 Query: 1050 DRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLLGVMGT 871 D+ KLL ELH+LKSMLPKV+VKGIP+VERA+I Y LLVEGTNLL VMGT Sbjct: 1121 DKSKLLYELHHLKSMLPKVIVKGIPTVERAVI--SETGEENDKRYKLLVEGTNLLAVMGT 1178 Query: 870 QGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMTYKG 691 G+D KT SNH++EV +TLGIEAAR+ I++EIQYTM+SHGM+ID RHMMLLADLMTYKG Sbjct: 1179 PGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKG 1238 Query: 690 EVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLGTG 511 E+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+GR+D+IEGVSECIIMGIPMQLGTG Sbjct: 1239 EILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTG 1298 Query: 510 ILKLRQRVEKLPELKYASDPII 445 ILK+RQR++ LPE KY DPI+ Sbjct: 1299 ILKVRQRLDHLPEFKYQPDPIL 1320 >ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa Japonica Group] gi|38347455|emb|CAD41360.2| OSJNBa0076N16.24 [Oryza sativa Japonica Group] gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa Japonica Group] gi|116310339|emb|CAH67354.1| OSIGBa0130B08.14 [Oryza sativa Indica Group] gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa Indica Group] gi|215768005|dbj|BAH00234.1| unnamed protein product [Oryza sativa Japonica Group] gi|218195112|gb|EEC77539.1| hypothetical protein OsI_16437 [Oryza sativa Indica Group] Length = 1383 Score = 563 bits (1452), Expect = e-158 Identities = 293/442 (66%), Positives = 351/442 (79%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 D+L++HD S + GCS F +LL+ F+ R +TR++L LDE V + S+ E+I A Sbjct: 943 DKLSEHDASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAA 1002 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 NISGIS +QL+VFL+TC+SRYH KK+E GEPGTQMTLKTFHFAGVA+M Sbjct: 1003 NISGISVKQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1062 Query: 1410 NVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVL 1231 NVTLGVPRIKEIINAAK ISTPIITA L ++ +V+ AR+VK S+EK LGEVA+A+KIVL Sbjct: 1063 NVTLGVPRIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVL 1122 Query: 1230 GSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPEV 1051 S QP + +KLDM IEALHMG+SA+SV+ SILNHPKIKLK EHV KL+IY + Sbjct: 1123 KSSQPNLVVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGI 1182 Query: 1050 DRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLLGVMGT 871 D+ KLL ELH+LKSMLPKV+VKGIP+VERA+I Y LLVEGTNLL VMGT Sbjct: 1183 DKSKLLYELHHLKSMLPKVIVKGIPTVERAVI--SETGEENDKRYKLLVEGTNLLAVMGT 1240 Query: 870 QGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMTYKG 691 G+D KT SNH++EV +TLGIEAAR+ I++EIQYTM+SHGM+ID RHMMLLADLMTYKG Sbjct: 1241 PGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKG 1300 Query: 690 EVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLGTG 511 E+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+GR+D+IEGVSECIIMGIPMQLGTG Sbjct: 1301 EILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTG 1360 Query: 510 ILKLRQRVEKLPELKYASDPII 445 ILK+RQR++ LPE KY DPI+ Sbjct: 1361 ILKVRQRLDHLPEFKYQPDPIL 1382 >ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza brachyantha] Length = 1389 Score = 563 bits (1450), Expect = e-157 Identities = 294/442 (66%), Positives = 352/442 (79%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 D+L++HD S + GCS F +LL +F+ R +TR++L LDE V GK S+ E+I A Sbjct: 954 DKLSEHDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHV-GKDSSIEESIAA 1012 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 NISGIS++QL+VFL+TC+SRYHSKK+E GEPGTQMTLKTFHFAGVA+M Sbjct: 1013 NISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1072 Query: 1410 NVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVL 1231 NVTLGVPRIKEIINAAK ISTPIITA L + +V+ AR+VK S+EK LGEVA+ +KIVL Sbjct: 1073 NVTLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVL 1132 Query: 1230 GSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPEV 1051 S QP + +KLDM IE LHMG+SA+SV+ SILNHP+IKLK EHV KL++Y + Sbjct: 1133 KSSQPNLVVKLDMQRIEDLHMGISADSVQLSILNHPRIKLKSEHVRVIDKAKLRVYPTAI 1192 Query: 1050 DRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLLGVMGT 871 D+ KLL ELHNLKSMLPKV+VKGIP+VERA+I +YSLLVEGTNLL VMGT Sbjct: 1193 DKSKLLYELHNLKSMLPKVIVKGIPTVERAVI------SQTGDKYSLLVEGTNLLAVMGT 1246 Query: 870 QGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMTYKG 691 G+D KT SNH++EV +TLGIEAAR+ I++EIQYTM SHGM+ID RHMMLLADLMTYKG Sbjct: 1247 PGVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKG 1306 Query: 690 EVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLGTG 511 E+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+GR+D+IEGVSECIIMGIPMQLGTG Sbjct: 1307 EILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTG 1366 Query: 510 ILKLRQRVEKLPELKYASDPII 445 ILK+RQR++ LPE KY DPI+ Sbjct: 1367 ILKVRQRLDHLPEFKYQPDPIL 1388 >ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor] gi|241937900|gb|EES11045.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor] Length = 1391 Score = 555 bits (1430), Expect = e-155 Identities = 289/442 (65%), Positives = 345/442 (78%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 D+L +HD S +GGCS F K L+ F+ KR TR++L L E VE K S E++ A Sbjct: 950 DKLLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAA 1009 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 ISGIS++QL+VFL+TC+SRY SKK+E GEPGTQMTLKTFHFAGVA+M Sbjct: 1010 IISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1069 Query: 1410 NVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVL 1231 NVTLGVPRIKEIINAA+ ISTPIITA L + +V+ AR+VK S+EK LGEVA A++IVL Sbjct: 1070 NVTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVL 1129 Query: 1230 GSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPEV 1051 S QP + +KLDM LIE+LHMG+SA+SV+ SILNHPKIKLK EHV KL+IY Sbjct: 1130 KSSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGT 1189 Query: 1050 DRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLLGVMGT 871 D+RKL ELHNLKS+LPKV+VKGIP+VER +I Y LLVEGTNLL VMGT Sbjct: 1190 DKRKLQLELHNLKSILPKVIVKGIPTVERVVI-DEVKVKNETERYQLLVEGTNLLAVMGT 1248 Query: 870 QGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMTYKG 691 G+D KT SNH++E QTLGIEAAR+ I++EIQYTM+SHGM+ID RHMMLLADLMTYKG Sbjct: 1249 PGVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKG 1308 Query: 690 EVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLGTG 511 E+LGITR+GI+KMK SVLMLASFEKT+EHLFNASY+GR+D+IEGVSECIIMGIPMQLGTG Sbjct: 1309 EILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTG 1368 Query: 510 ILKLRQRVEKLPELKYASDPII 445 ILK+RQR++ +PE KY DPI+ Sbjct: 1369 ILKVRQRLDHVPEFKYQPDPIL 1390 >ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria italica] Length = 1397 Score = 553 bits (1424), Expect = e-154 Identities = 290/443 (65%), Positives = 346/443 (78%), Gaps = 1/443 (0%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 D+L +H S +GGCS F + L F+ +R TRK+L LDE V GK + +E I+A Sbjct: 956 DKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHV-GKNDSCIEEIIA 1014 Query: 1590 -NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVAN 1414 NISGIS++QL+VFL+TC SRY+SK +E GEPGTQMTLKTFHFAGVA+ Sbjct: 1015 ANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1074 Query: 1413 MNVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIV 1234 MNVTLGVPRIKEIINAAK ISTPIIT L + +V+ AR+VK ++EK LGEVA A+KIV Sbjct: 1075 MNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIV 1134 Query: 1233 LGSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPE 1054 L S QP + +KLDM LIEALHMG+SA+SV+ SILNHPKIKLK EHV KL+IY Sbjct: 1135 LKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAG 1194 Query: 1053 VDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLLGVMG 874 D+ KL ELHNLK+MLPKV+VKGIP+VER +I +Y+LLVEGTNLL VMG Sbjct: 1195 TDKSKLQLELHNLKAMLPKVIVKGIPTVERVVI-DERKKEGKLEKYNLLVEGTNLLAVMG 1253 Query: 873 TQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMTYK 694 T G+D R T SNH++E+ TLGIEAAR+ I++EIQYTM+SHGM+ID+RHMMLLADLMTYK Sbjct: 1254 TPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYK 1313 Query: 693 GEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLGT 514 GEVLGITR+GI+KMK SVLMLASFEKT+EHLFNASY+GR+D IEGVSECIIMGIPMQLGT Sbjct: 1314 GEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGT 1373 Query: 513 GILKLRQRVEKLPELKYASDPII 445 GILK+RQR++ LPELKY DPI+ Sbjct: 1374 GILKVRQRLDHLPELKYQPDPIL 1396 >ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Brachypodium distachyon] Length = 1392 Score = 523 bits (1348), Expect = e-146 Identities = 280/443 (63%), Positives = 332/443 (74%), Gaps = 1/443 (0%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 D+L++ DMS GGCS F +LL+ F R +TR++L LDE V K S+ E I A Sbjct: 950 DKLSEQDMS-SGGCSDKFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSSIEERIAA 1008 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 NISGIS++QL+VFL+TC+SRYHSK +E GEPGTQMTLKTFHFAGVA+M Sbjct: 1009 NISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1068 Query: 1410 NVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVL 1231 NVTLGVPRIKEIINAAKNISTPIITA L + ++ FA VK +EK LGEVA +KIVL Sbjct: 1069 NVTLGVPRIKEIINAAKNISTPIITAELLSGQDMSFAVKVKRYVEKVVLGEVAAVIKIVL 1128 Query: 1230 GSGQPYISIKLDMDLIEAL-HMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPE 1054 S QP + +KLDM IEA +MG+S++SV+ SI+ HPKIKLK EHV KL+IY Sbjct: 1129 KSSQPNLVVKLDMQRIEAQGYMGISSDSVQQSIIRHPKIKLKSEHVRVIDGAKLRIYPTG 1188 Query: 1053 VDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLLGVMG 874 D+ KL ELH LKSMLPKV+VKGIP+VERA++ Y+LLVEGTNLL V+G Sbjct: 1189 TDKSKLQLELHTLKSMLPKVIVKGIPTVERAVVNPVKRPDKTLDRYNLLVEGTNLLKVLG 1248 Query: 873 TQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMTYK 694 T G+D +KT SNH++EV QTLGIEAAR+ I++EI+YT S+ M ID RHMMLLADLMTYK Sbjct: 1249 TPGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRYTFESNNMIIDQRHMMLLADLMTYK 1308 Query: 693 GEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLGT 514 GEVLGITRFGI KMK SVLMLASFEKT EHLFNASY+GR+D IEGVSECIIMGIPM LG+ Sbjct: 1309 GEVLGITRFGIVKMKSSVLMLASFEKTLEHLFNASYSGREDEIEGVSECIIMGIPMTLGS 1368 Query: 513 GILKLRQRVEKLPELKYASDPII 445 GILK+RQR++ LPE Y D II Sbjct: 1369 GILKVRQRLDHLPEFNYQPDAII 1391 >gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu] Length = 1248 Score = 519 bits (1336), Expect = e-144 Identities = 281/449 (62%), Positives = 335/449 (74%), Gaps = 7/449 (1%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 D+L++ D S GGCS F +LL+ FV R NTR++L LDE V K S+ E + A Sbjct: 799 DKLSEQDPSA-GGCSDRFKELLTKFVGNRIKMLRNTRRALHLDEDHVGRKDSSIEECVAA 857 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 NISGIS++QL+VFL+TC+SRYHSK +E GEPGTQMTLKTFHFAGVA+M Sbjct: 858 NISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 917 Query: 1410 N------VTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAK 1249 + VTLGVPRIKEIINAAK ISTPIITA L + + F VK IEK LGEVA Sbjct: 918 SILSVLYVTLGVPRIKEIINAAKKISTPIITAELLSGQDESFGVKVKRCIEKVVLGEVAA 977 Query: 1248 AVKIVLGSGQPYISIKLDMDLIEAL-HMGLSAESVRHSILNHPKIKLKEEHVYSARHGKL 1072 A+KIVL S QP + +KLDM IEA + G++A+SV+ SI+N+PK+KLK +HV KL Sbjct: 978 AIKIVLKSSQPNLVVKLDMQRIEAQGYEGINADSVQLSIINYPKLKLKSQHVRVIDEAKL 1037 Query: 1071 KIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTN 892 +IY DR KL ELHNLKSMLPKV+VKGIP+VERA++ Y+LLVEGTN Sbjct: 1038 RIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPVKGRDKTIERYNLLVEGTN 1097 Query: 891 LLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLA 712 LL V+G G+D KT SNH++EV QTLGIEAAR+ I++EIQYT S+ M IDLRHMMLLA Sbjct: 1098 LLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQYTFESNNMIIDLRHMMLLA 1157 Query: 711 DLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGI 532 DLMTYKGEVLGITR+GI+KMK SVLMLASFEKT+EHLFNASYAGR+D+I+GVSECIIMGI Sbjct: 1158 DLMTYKGEVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASYAGREDQIDGVSECIIMGI 1217 Query: 531 PMQLGTGILKLRQRVEKLPELKYASDPII 445 PMQLGTGILK+RQR+E LPE KY PI+ Sbjct: 1218 PMQLGTGILKVRQRLESLPEFKYQPAPIM 1246 >gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii] Length = 1117 Score = 518 bits (1333), Expect = e-144 Identities = 280/449 (62%), Positives = 335/449 (74%), Gaps = 7/449 (1%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 D+L++ D S GGCS F +LL+ FV R NTR++L LDE V K S+ E + A Sbjct: 668 DKLSEQDPSA-GGCSDRFKELLTKFVGNRIKMLRNTRRALHLDEDHVGRKDSSIEECVAA 726 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 NISGI+++QL+VFL+TC+SRYHSK +E GEPGTQMTLKTFHFAGVA+M Sbjct: 727 NISGIAAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 786 Query: 1410 N------VTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAK 1249 + VTLGVPRIKEIINAAK ISTPIITA L + + F VK IEK LGEVA Sbjct: 787 SILSVLYVTLGVPRIKEIINAAKKISTPIITAELLSGQDESFGVKVKRCIEKVVLGEVAA 846 Query: 1248 AVKIVLGSGQPYISIKLDMDLIEAL-HMGLSAESVRHSILNHPKIKLKEEHVYSARHGKL 1072 A+KIVL S QP + +KLDM IEA + G++A+SV+ SI+N+PK+KLK +HV KL Sbjct: 847 AIKIVLKSSQPNLVVKLDMQRIEAQGYEGINADSVQLSIINYPKLKLKSQHVRVIDEAKL 906 Query: 1071 KIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTN 892 +IY DR KL ELHNLKSMLPKV+VKGIP+VERA++ Y+LLVEGTN Sbjct: 907 RIYPDGTDRSKLQFELHNLKSMLPKVIVKGIPTVERAVVNPVKGRDKTIERYNLLVEGTN 966 Query: 891 LLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLA 712 LL V+G G+D KT SNH++EV QTLGIEAAR+ I++EIQYT S+ M IDLRHMMLLA Sbjct: 967 LLAVLGAPGVDAMKTKSNHIMEVNQTLGIEAARRSIIDEIQYTFESNNMIIDLRHMMLLA 1026 Query: 711 DLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGI 532 DLMTYKGEVLGITR+GI+KMK SVLMLASFEKT+EHLFNASYAGR+D+I+GVSECIIMGI Sbjct: 1027 DLMTYKGEVLGITRYGIAKMKSSVLMLASFEKTSEHLFNASYAGREDQIDGVSECIIMGI 1086 Query: 531 PMQLGTGILKLRQRVEKLPELKYASDPII 445 PMQLGTGILK+RQR+E LPE KY PI+ Sbjct: 1087 PMQLGTGILKVRQRLESLPEFKYQPAPIM 1115 >ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis vinifera] Length = 1383 Score = 511 bits (1317), Expect = e-142 Identities = 277/441 (62%), Positives = 335/441 (75%) Frame = -2 Query: 1767 RLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVAN 1588 RL +H+ S EG CS AF LS F+ + F NTR++L L V + E N Sbjct: 949 RLKEHNTSAEG-CSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKN 1007 Query: 1587 ISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANMN 1408 ISGI+S+QL+VFL+TCISRY K++E GEPGTQMTLKTFHFAGVA+MN Sbjct: 1008 ISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMN 1067 Query: 1407 VTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLG 1228 VTLGVPRIKEIIN AK ISTPIITAALE +NNV ARMVK IE+TTLG+VAK++KIVL Sbjct: 1068 VTLGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLT 1127 Query: 1227 SGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPEVD 1048 S I++ LDM+ I+A + + + VR SIL + +IKLK++H+ GKL+++ P+ D Sbjct: 1128 SRLALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVH-PQGD 1186 Query: 1047 RRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLLGVMGTQ 868 R + ELH LK++LP VVVKGI +VERA+I Y+LLVEGT L VMGT+ Sbjct: 1187 RSTIHFELHALKNLLPTVVVKGIETVERAVINKDNKVK-----YNLLVEGTGLQTVMGTE 1241 Query: 867 GIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMTYKGE 688 G+ GR+TTSNH+IEVQQTLGIEAARKCI+NEIQYTM SHGMSID+RHMMLLADLMT++GE Sbjct: 1242 GVIGRETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGE 1301 Query: 687 VLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLGTGI 508 VLGITRFGI KM +SVLMLASFEKTA+HLFNAS +GRDD+IEGVSECIIMGIPMQLGTGI Sbjct: 1302 VLGITRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGI 1361 Query: 507 LKLRQRVEKLPELKYASDPII 445 LK+RQR++++PEL Y DPII Sbjct: 1362 LKVRQRLQQVPELSYGLDPII 1382 >ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda] gi|548832896|gb|ERM95665.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda] Length = 1383 Score = 500 bits (1287), Expect = e-139 Identities = 273/447 (61%), Positives = 333/447 (74%), Gaps = 5/447 (1%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 DRL+KHDM+PE GCS AF + LSNF+ KR A TR L LDE V+ ++ + LE++ A Sbjct: 943 DRLSKHDMTPERGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAA 1002 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 NISGIS +QL VFLETCISRYH K++E GEPGTQMTLKTFHFAGVA+M Sbjct: 1003 NISGISRQQLRVFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1062 Query: 1410 NVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVL 1231 N+TLGVPRIKEI+ A+K ISTPIITA L DN+ AR+VK IEKT LGEVAK VKI + Sbjct: 1063 NITLGVPRIKEILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISV 1122 Query: 1230 GSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPK-----IKLKEEHVYSARHGKLKI 1066 Q I+I LDM IEAL M + A++V SI + K KLK + ++ KLKI Sbjct: 1123 TPTQASINITLDMKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTL-PDKLKI 1181 Query: 1065 YTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLL 886 PE+ R+++L LH L+S+LPK++VKGIP+VERA+I + +LLVEGTNLL Sbjct: 1182 LLPEIGRKEVLYSLHLLQSLLPKIIVKGIPTVERAVI------NNVKGKLNLLVEGTNLL 1235 Query: 885 GVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADL 706 VMGT G+DGR TTSNH++EV+ TLGIEAARK I++EIQYTM+SHGMSIDLRHMMLLADL Sbjct: 1236 AVMGTPGVDGRNTTSNHIVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADL 1295 Query: 705 MTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPM 526 MT++G VLGI RFGI+KMKESVLMLASFE+TA+ LF+A+ GR D I GVSECIIMG+PM Sbjct: 1296 MTFRGLVLGIQRFGITKMKESVLMLASFERTADILFDATTRGRVDTIAGVSECIIMGVPM 1355 Query: 525 QLGTGILKLRQRVEKLPELKYASDPII 445 Q+GTGIL ++QR E+L +L Y DPII Sbjct: 1356 QIGTGILSVQQRPEQLAKLTYGPDPII 1382 >gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis] Length = 1179 Score = 495 bits (1275), Expect = e-137 Identities = 265/442 (59%), Positives = 321/442 (72%), Gaps = 1/442 (0%) Frame = -2 Query: 1767 RLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVAN 1588 RL+K DM+PEGGCS AF L +F+ AF T + E + + S +NIV Sbjct: 736 RLSKKDMTPEGGCSAAFKNSLKSFLDNYVKAFKRTWDPCESTEGHAKMENSATTKNIVLQ 795 Query: 1587 ISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANMN 1408 +SG ++RQLEVFL+TCISRYHSKK+E GEPGTQMTLKTFHFAGVA+MN Sbjct: 796 LSGATARQLEVFLDTCISRYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN 855 Query: 1407 VTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLG 1228 VTLGVPRIKEIIN AK ISTPIITA LE DNNV FAR+V+ IEK +LG+VAK++K V+ Sbjct: 856 VTLGVPRIKEIINGAKKISTPIITAILECDNNVNFARIVRGRIEKISLGQVAKSIKTVMT 915 Query: 1227 SGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPEVD 1048 S + I LDM+ I+ + + A VR SIL P+IKLK+EH+ KL+I E + Sbjct: 916 SRVASVVITLDMERIQDALLSIDANVVRDSILQTPRIKLKKEHIRVLDFKKLEILPYESN 975 Query: 1047 RRKLLSELHNLKSMLPKVVVKGIPSVERAII-XXXXXXXXXXXEYSLLVEGTNLLGVMGT 871 R KL L L ML ++VKGI +VERA+I +Y LLVEGT LLGVMGT Sbjct: 976 RSKLYHHLQFLAKMLQNILVKGIKTVERAVISSEKDKKTDISKKYKLLVEGTGLLGVMGT 1035 Query: 870 QGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMTYKG 691 +G+DGR T +NH+IEVQQTLGIEAAR CI++EI+YTM+SHGMSID RHMMLLAD+MT +G Sbjct: 1036 EGVDGRNTKTNHIIEVQQTLGIEAARTCIIDEIEYTMKSHGMSIDTRHMMLLADVMTSRG 1095 Query: 690 EVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLGTG 511 EVLGITRFGI KM +SVLMLASFEKTA+HLFNAS GR+D+IEGVSECIIMGIPMQ+GTG Sbjct: 1096 EVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGREDKIEGVSECIIMGIPMQIGTG 1155 Query: 510 ILKLRQRVEKLPELKYASDPII 445 ++K+RQRV+ P L Y PI+ Sbjct: 1156 MIKVRQRVDVPPMLSYGPKPIL 1177 >ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform X1 [Solanum tuberosum] Length = 1394 Score = 490 bits (1262), Expect = e-136 Identities = 270/447 (60%), Positives = 323/447 (72%), Gaps = 5/447 (1%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAA-AFANTRKSLQLDEAVVEGKRSTALENIV 1594 +RL+ HDM+PEGGCS AF LS+F+ K A N R+SL L E EG LE I Sbjct: 944 ERLSYHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIA 1003 Query: 1593 ANISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVAN 1414 NISGI+ RQL+VFL TCISRYH K++E GEPGTQMTLKTFHFAGVA+ Sbjct: 1004 LNISGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1063 Query: 1413 MNVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIV 1234 MNVTLGVPRIKEIINAAK I+TPIIT L + N+ ARM+K+ IEKT LG+VAK+VKIV Sbjct: 1064 MNVTLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIV 1123 Query: 1233 LGSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPE 1054 L S I+I LDM+ I+ + + A +V+ SIL KIKLKE + KL+++ P+ Sbjct: 1124 LASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVF-PQ 1182 Query: 1053 VDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXE----YSLLVEGTNLL 886 ++ KL ELH LK+ LP VVVKGI +V+RA++ Y LLVEGT LL Sbjct: 1183 ANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLL 1242 Query: 885 GVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADL 706 VMG +G+DGR T SNH++EVQ TLGIEAAR I++EI YTM SHGM+IDLRHMMLLADL Sbjct: 1243 AVMGIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADL 1302 Query: 705 MTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPM 526 MTYKGEVLGITR G+ KMK+SVLMLASFEKT +HLFNAS GRDD+IEGV+ECIIMGIPM Sbjct: 1303 MTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPM 1362 Query: 525 QLGTGILKLRQRVEKLPELKYASDPII 445 +GTG+ KLRQRVE++ EL Y DPII Sbjct: 1363 TIGTGMFKLRQRVEQV-ELNYQPDPII 1388 >ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum lycopersicum] Length = 1390 Score = 489 bits (1259), Expect = e-135 Identities = 269/447 (60%), Positives = 324/447 (72%), Gaps = 5/447 (1%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAA-AFANTRKSLQLDEAVVEGKRSTALENIV 1594 +RL+ HDM+PEGGCS AF LS+F+ K A N R+SL L E EG LE IV Sbjct: 944 ERLSYHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIV 1003 Query: 1593 ANISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVAN 1414 NISGI+ +QL+VFL TCISRYH K++E GEPGTQMTLKTFHFAGVA+ Sbjct: 1004 LNISGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVAS 1063 Query: 1413 MNVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIV 1234 MNVTLGVPRIKEIINAAK I+TPIITA L + N+ ARM+K+ IEKT LG+VAK+VKIV Sbjct: 1064 MNVTLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIV 1123 Query: 1233 LGSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPE 1054 L S I+I LDM+ I+ + + A +V+ SIL KIKLKE + KL+++ P+ Sbjct: 1124 LASRLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVF-PQ 1182 Query: 1053 VDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXE----YSLLVEGTNLL 886 ++ KL ELH LK+ LP VVVKGI +V+RA++ Y LLVEGT LL Sbjct: 1183 ANKDKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLL 1242 Query: 885 GVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADL 706 VMG +G+DGR T SNH++EVQ TLGIEAAR I++EI YTM SHGM+IDLRHMMLLADL Sbjct: 1243 AVMGIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADL 1302 Query: 705 MTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPM 526 MTYKGEVLGITR G+ KMK+SVLMLASFEKT +HLFNAS GRDD+IEGV+ECIIMGIPM Sbjct: 1303 MTYKGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPM 1362 Query: 525 QLGTGILKLRQRVEKLPELKYASDPII 445 +GTG+ KLRQRVE + EL Y DP++ Sbjct: 1363 TIGTGMFKLRQRVEHV-ELNYQPDPMM 1388 >ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii] gi|300146624|gb|EFJ13293.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii] Length = 1393 Score = 488 bits (1256), Expect = e-135 Identities = 260/444 (58%), Positives = 327/444 (73%), Gaps = 4/444 (0%) Frame = -2 Query: 1767 RLAKHDMSPEGG-CSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 ++ + S +G CSTAF L F+ K ++TRK L L ++ + EN+ A Sbjct: 957 KIVESKFSQDGSECSTAFLDSLRKFLRKEFDTISSTRKRLSLP---LDDFGNVDDENVAA 1013 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 N+SG++SRQLEVFL TCI RYH KK++ GEPGTQMTLKTFHFAGVA+M Sbjct: 1014 NVSGLTSRQLEVFLNTCIGRYHRKKLDPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASM 1073 Query: 1410 NVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVL 1231 N+TLGVPRIKEIINA+K ISTPIITA L ++N+V AR+VK IEKT LG+VAK++KIVL Sbjct: 1074 NITLGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIVL 1133 Query: 1230 GSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIK---LKEEHVYSARHGKLKIYT 1060 GQ ++SIKLDMD I +L + + AE+V ++L PKIK LKE+HV + + T Sbjct: 1134 RPGQAFVSIKLDMDRIYSLQLDIRAETVAEAVLKFPKIKSMKLKEQHVKVNDDRSISLTT 1193 Query: 1059 PEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLLGV 880 PE DR+K+L LH+L++MLPKV+VKGIP+VERA+I Y+LLVEGTNL V Sbjct: 1194 PESDRKKMLFALHSLQNMLPKVIVKGIPTVERAVINQEKGK------YNLLVEGTNLKAV 1247 Query: 879 MGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMT 700 MGT+G+DGR+TTSNH+ E + LGIEAAR I+ EIQYTM SHGMSID RHMMLLAD+MT Sbjct: 1248 MGTEGVDGRETTSNHIFETVEVLGIEAARNGIIKEIQYTMGSHGMSIDQRHMMLLADVMT 1307 Query: 699 YKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQL 520 Y+GE+LGITRFG++KMK+SVLMLASFEKT +HLF AS GR D+IEGVSECIIMGIPM L Sbjct: 1308 YRGEILGITRFGMAKMKDSVLMLASFEKTTDHLFAASVHGRTDQIEGVSECIIMGIPMPL 1367 Query: 519 GTGILKLRQRVEKLPELKYASDPI 448 GTG+ K+RQ+V ++P+L Y P+ Sbjct: 1368 GTGLFKVRQKVGRIPKLIYGPPPL 1391 >ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis sativus] Length = 1400 Score = 484 bits (1245), Expect = e-134 Identities = 262/451 (58%), Positives = 322/451 (71%), Gaps = 9/451 (1%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLD-EAVVEGKRSTALEN-- 1600 DRL+K D SPE GCS AF L F++K A + +L D E+ V+ ++ +N Sbjct: 949 DRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSSDNDN 1008 Query: 1599 ------IVANISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKT 1438 +V NI+G++ RQL+VFL+TC+SRYH+KK+E GEPGTQMTLKT Sbjct: 1009 IVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKT 1068 Query: 1437 FHFAGVANMNVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGE 1258 FHFAGVA+MNVTLGVPRIKEIIN AK ISTPI+TAAL +D+NV ARMVK+ IEKT LG+ Sbjct: 1069 FHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTNLGQ 1128 Query: 1257 VAKAVKIVLGSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHG 1078 +AK ++IV+ S I IKLDM+ I + + A V+ +IL PK+KLK EH+ Sbjct: 1129 IAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVLDDR 1188 Query: 1077 KLKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEG 898 KL++ + DR KL LH LK+MLP VVVKGI +V RA+I ++SLLVEG Sbjct: 1189 KLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLLVEG 1248 Query: 897 TNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMML 718 T L VMGT+G+DG T SNH+IEVQQ LGIEAARKCI+ EI+YTM SHGMSID+RHMML Sbjct: 1249 TGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMML 1308 Query: 717 LADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIM 538 L DLMT++GEVLGITRFGI KM +SVLMLASFEKTA+HLFNAS GRDD+IEGVSEC+IM Sbjct: 1309 LGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIM 1368 Query: 537 GIPMQLGTGILKLRQRVEKLPELKYASDPII 445 GIPM LGTG+LK+RQRV +L Y I+ Sbjct: 1369 GIPMPLGTGMLKVRQRVSVPQQLPYGPPAIL 1399 >emb|CBI16226.3| unnamed protein product [Vitis vinifera] Length = 1819 Score = 472 bits (1215), Expect = e-130 Identities = 250/377 (66%), Positives = 300/377 (79%) Frame = -2 Query: 1575 SSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANMNVTLG 1396 S ++L VFL+TCISRY K++E GEPGTQMTLKTFHFAGVA+MNVTLG Sbjct: 1448 SRKRLGVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLG 1507 Query: 1395 VPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLGSGQP 1216 VPRIKEIIN AK ISTPIITAALE +NNV ARMVK IE+TTLG+VAK++KIVL S Sbjct: 1508 VPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLA 1567 Query: 1215 YISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPEVDRRKL 1036 I++ LDM+ I+A + + + VR SIL + +IKLK++H+ GKL+++ P+ DR + Sbjct: 1568 LIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVH-PQGDRSTI 1626 Query: 1035 LSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLLGVMGTQGIDG 856 ELH LK++LP VVVKGI +VERA+I Y+LLVEGT L VMGT+G+ G Sbjct: 1627 HFELHALKNLLPTVVVKGIETVERAVINKDNKVK-----YNLLVEGTGLQTVMGTEGVIG 1681 Query: 855 RKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADLMTYKGEVLGI 676 R+TTSNH+IEVQQTLGIEAARKCI+NEIQYTM SHGMSID+RHMMLLADLMT++GEVLGI Sbjct: 1682 RETTSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGI 1741 Query: 675 TRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPMQLGTGILKLR 496 TRFGI KM +SVLMLASFEKTA+HLFNAS +GRDD+IEGVSECIIMGIPMQLGTGILK+R Sbjct: 1742 TRFGIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVR 1801 Query: 495 QRVEKLPELKYASDPII 445 QR++++PEL Y DPII Sbjct: 1802 QRLQQVPELSYGLDPII 1818 >ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Brachypodium distachyon] Length = 1400 Score = 471 bits (1212), Expect = e-130 Identities = 257/447 (57%), Positives = 319/447 (71%), Gaps = 5/447 (1%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 D L K + S G CS ++L+ F+ R +TR++L +DE V + S+ E I A Sbjct: 953 DTLFKQETS-SGRCSDKLKEMLTKFLEDRVKMLRSTRRALHIDEDHVGRRDSSVEECIAA 1011 Query: 1590 NISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANM 1411 +ISGIS++QL+VFL+TC SRYHSK +E GEPGTQMTLKTFHFAGVA+M Sbjct: 1012 DISGISAKQLQVFLDTCFSRYHSKIIEAGASVGPIGAHSIGEPGTQMTLKTFHFAGVASM 1071 Query: 1410 NVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVL 1231 NVTLGVPRIKEIINAAK STPIIT L + + FA VKSSIEK LGEVA A+ IV Sbjct: 1072 NVTLGVPRIKEIINAAKKTSTPIITTELLSGQDKSFAVKVKSSIEKVVLGEVAAAINIVF 1131 Query: 1230 GSGQPYISIKLDMDLIEAL-HMGLSAESVRHSILNHPKI----KLKEEHVYSARHGKLKI 1066 + +KLDM+ IEA +MG+S++SVR SILNH +I KL EHV KL+I Sbjct: 1132 KETDSNLVVKLDMERIEAQGYMGISSDSVRLSILNHRRIRLELKLTSEHVCVVDQAKLRI 1191 Query: 1065 YTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLL 886 + + LL ELHNLKSMLPKV+VKGIP+VERA++ Y+LLVEGTNLL Sbjct: 1192 HAAGKGKSGLLLELHNLKSMLPKVIVKGIPTVERAVVNPVFRHDKTFDRYNLLVEGTNLL 1251 Query: 885 GVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADL 706 V+GT G+D +KT SNH++EV QTLGIEAAR+ I++EI+YT ++ M IDLRHMMLLAD+ Sbjct: 1252 AVLGTPGVDAKKTKSNHIMEVSQTLGIEAARRSIIDEIRYTFENNNMMIDLRHMMLLADV 1311 Query: 705 MTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPM 526 MT KGEVL +T GI+KMK SVLMLASFE+T +HLFNASYAGR D IEGVSEC+IMG+PM Sbjct: 1312 MTSKGEVLPMTAHGIAKMKTSVLMLASFERTMDHLFNASYAGRVDEIEGVSECVIMGMPM 1371 Query: 525 QLGTGILKLRQRVEKLPELKYASDPII 445 + GTGILK++QR+ LPE +Y DP++ Sbjct: 1372 KPGTGILKVKQRLPDLPEFQYQPDPLV 1398 >ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1| predicted protein [Physcomitrella patens] Length = 1397 Score = 469 bits (1206), Expect = e-129 Identities = 259/447 (57%), Positives = 318/447 (71%), Gaps = 5/447 (1%) Frame = -2 Query: 1770 DRLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVA 1591 +RL K DM+ E AF L F+ +TR L L G T LE+ Sbjct: 958 ERLTKPDMTSE--TVGAFKTSLKKFMDSCIKDNISTRTKLGLPLDCNGGPDQTLLESTAT 1015 Query: 1590 NISGISSRQLE-----VFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFA 1426 ISG++SRQLE VFL+TCI RYH K+VE GEPGTQMTLKTFHFA Sbjct: 1016 YISGLTSRQLEICLLQVFLDTCIKRYHMKRVEPGAAVGAVGAQSIGEPGTQMTLKTFHFA 1075 Query: 1425 GVANMNVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKA 1246 GVA+MN+TLGVPRIKEIINA+KNISTPIITA L + N+ AR+VK IEKTTLGEVAK+ Sbjct: 1076 GVASMNITLGVPRIKEIINASKNISTPIITAVLVSGNDEKAARIVKGRIEKTTLGEVAKS 1135 Query: 1245 VKIVLGSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKI 1066 +K VL + Q IS+KLDM I+AL + +++++V +I+ PKIKLK ++ KL + Sbjct: 1136 IKTVLRASQAIISVKLDMKRIDALQLDINSDTVALAIVQTPKIKLKHVNIRIVDRDKLIV 1195 Query: 1065 YTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYSLLVEGTNLL 886 P+ D+ KL LH+L +MLPKV+VKGIPSVERA+I Y+LLVEGTNL Sbjct: 1196 IPPDQDKGKLYFYLHSLCNMLPKVIVKGIPSVERAVINKEKGV------YNLLVEGTNLK 1249 Query: 885 GVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLLADL 706 VMG G++G+ T SNHVIE +QTLGIEAAR I++EIQYTM SHGM+ID RHMMLLAD+ Sbjct: 1250 AVMGISGVNGKLTKSNHVIEAEQTLGIEAARNVIIDEIQYTMGSHGMTIDARHMMLLADV 1309 Query: 705 MTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMGIPM 526 MTYKGEVLGITRFGI+KMK+SVLMLASFEKT +HLF+A+ GR D+IEGVSECIIMGIPM Sbjct: 1310 MTYKGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAAIHGRVDKIEGVSECIIMGIPM 1369 Query: 525 QLGTGILKLRQRVEKLPELKYASDPII 445 +GTG+ K+RQ+VEKLP+L Y P++ Sbjct: 1370 PIGTGLFKIRQKVEKLPKLSYGPTPLL 1396 >ref|XP_004294640.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Fragaria vesca subsp. vesca] Length = 1390 Score = 460 bits (1184), Expect = e-127 Identities = 242/442 (54%), Positives = 313/442 (70%), Gaps = 9/442 (2%) Frame = -2 Query: 1767 RLAKHDMSPEGGCSTAFNKLLSNFVHKRAAAFANTRKSLQLDEAVVEGKRSTALENIVAN 1588 RL++ DM+P+GGCS F + F+ + A T+++ L+++ +S L+NIV N Sbjct: 952 RLSEQDMTPDGGCSMGFKSSIEQFLDEYVKALRKTQEAFLLNQSPGWEVKSATLQNIVQN 1011 Query: 1587 ISGISSRQLEVFLETCISRYHSKKVEXXXXXXXXXXXXXGEPGTQMTLKTFHFAGVANMN 1408 ISG++ RQL+VFL+TCISRYHSKKV+ GEPGTQMTLKTFHFAGVA+MN Sbjct: 1012 ISGVTPRQLKVFLDTCISRYHSKKVDAGTAIGVIGAQSIGEPGTQMTLKTFHFAGVASMN 1071 Query: 1407 VTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEKTTLGEVAKAVKIVLG 1228 VTLGVPRIKEIIN AKNI TPIIT LE DNN + ARMV IEKT LG+VA+ ++IV+ Sbjct: 1072 VTLGVPRIKEIINGAKNIHTPIITTVLECDNNPMIARMVAGRIEKTNLGQVAECIEIVMS 1131 Query: 1227 SGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVYSARHGKLKIYTPEVD 1048 Y+ +KLDM +I+ H+ + A V+ SIL P+IKLK EH+ + +++++ E D Sbjct: 1132 PRAAYVEVKLDMAVIQDAHLSIDANVVKQSILGTPRIKLKHEHIRVPDNQTVEVHSHEKD 1191 Query: 1047 RRKLLSELHNLKSMLPKVVVKGIPSVERAII---------XXXXXXXXXXXEYSLLVEGT 895 RRKL L+ LKS+LP V+V+GI ++ER +I +Y L EG Sbjct: 1192 RRKLHFHLYYLKSILPNVIVRGIKTIERVVIDEEKVKRDKKDIDIKCGDEKKYKLFAEGK 1251 Query: 894 NLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDLRHMMLL 715 LL VM T+G+DG KTTSN +IEVQQTLGIEAAR CI+ EI+YTM+SHGM+ID RHMMLL Sbjct: 1252 GLLAVMSTKGVDGCKTTSNDIIEVQQTLGIEAARTCIIEEIKYTMKSHGMNIDDRHMMLL 1311 Query: 714 ADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVSECIIMG 535 AD+MT++G VLGITRFG+ +M +SVLMLASFE+T +HLFNAS G D+IEGVSE IIMG Sbjct: 1312 ADVMTFRGLVLGITRFGVQQMGKSVLMLASFERTDDHLFNASVQGTVDKIEGVSESIIMG 1371 Query: 534 IPMQLGTGILKLRQRVEKLPEL 469 IPM +GTG+ K++QR LPE+ Sbjct: 1372 IPMPIGTGMFKIKQR---LPEM 1390 >tpg|DAA37177.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays] Length = 336 Score = 459 bits (1180), Expect = e-126 Identities = 236/336 (70%), Positives = 274/336 (81%) Frame = -2 Query: 1452 MTLKTFHFAGVANMNVTLGVPRIKEIINAAKNISTPIITAALENDNNVVFARMVKSSIEK 1273 MTLKTFHFAGVA+MNVTLGVPRIKEIINAAK ISTPIITA L + +V+ AR+VK S+EK Sbjct: 1 MTLKTFHFAGVASMNVTLGVPRIKEIINAAKKISTPIITAQLLSRKDVLSARIVKGSMEK 60 Query: 1272 TTLGEVAKAVKIVLGSGQPYISIKLDMDLIEALHMGLSAESVRHSILNHPKIKLKEEHVY 1093 LGEVA ++ VL S P + +KLDM LIE LHMG+SA+SV+ SILNHPK+KLK EHV Sbjct: 61 AVLGEVAATIQTVLKSSLPNLVVKLDMQLIETLHMGISADSVKLSILNHPKLKLKSEHVR 120 Query: 1092 SARHGKLKIYTPEVDRRKLLSELHNLKSMLPKVVVKGIPSVERAIIXXXXXXXXXXXEYS 913 KL+IY D+ KL ELHNLKS+LPKV+VKGIP+VER +I Y Sbjct: 121 VIDRAKLRIYPAGTDKLKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVNNATER-YQ 179 Query: 912 LLVEGTNLLGVMGTQGIDGRKTTSNHVIEVQQTLGIEAARKCIVNEIQYTMRSHGMSIDL 733 LLVEGTNLL VMGT G+D RKT SNH++E QTLGIEAAR+ I++EIQYTM+SHGM+ID Sbjct: 180 LLVEGTNLLAVMGTPGVDARKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDR 239 Query: 732 RHMMLLADLMTYKGEVLGITRFGISKMKESVLMLASFEKTAEHLFNASYAGRDDRIEGVS 553 RHMMLLADLMTYKGE+LGITR+GI+KMK SVLMLASFEKTAEHLFNASY+GR D+IEGVS Sbjct: 240 RHMMLLADLMTYKGEILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGRQDQIEGVS 299 Query: 552 ECIIMGIPMQLGTGILKLRQRVEKLPELKYASDPII 445 ECIIMGIPMQLGTGILK+RQR++ +PE KY DPI+ Sbjct: 300 ECIIMGIPMQLGTGILKVRQRLDHVPEFKYQPDPIL 335