BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00008931
         (307 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, I...    84   3e-14
gb|EMJ00137.1| hypothetical protein PRUPE_ppa013019mg [Prunus pe...    83   3e-14
gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subun...    82   1e-13
gb|ESW15363.1| hypothetical protein PHAVU_007G066800g [Phaseolus...    82   1e-13
ref|XP_006421865.1| hypothetical protein CICLE_v10006171mg [Citr...    82   1e-13
ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Popu...    82   1e-13
ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [A...    82   1e-13
ref|XP_004982505.1| PREDICTED: DNA-directed RNA polymerases I, I...    82   1e-13
gb|EOY23108.1| DNA-directed RNA polymerase II subunit protein is...    82   1e-13
gb|EOY23107.1| DNA-directed RNA polymerase II subunit protein is...    82   1e-13
gb|EOY23106.1| DNA-directed RNA polymerase II subunit protein is...    82   1e-13
ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases I, I...    82   1e-13
gb|EMJ05946.1| hypothetical protein PRUPE_ppa013037mg [Prunus pe...    82   1e-13
gb|AFK45089.1| unknown [Lotus japonicus]                               82   1e-13
gb|AFK33543.1| unknown [Lotus japonicus]                               82   1e-13
ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, ...    82   1e-13
ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycin...    82   1e-13
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu...    82   1e-13
ref|XP_002322450.1| DNA-directed RNA polymerase II family protei...    82   1e-13
gb|ACJ84175.1| unknown [Medicago truncatula]                           82   1e-13

>ref|XP_004290539.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Fragaria vesca subsp. vesca]
          Length = 142

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN
Sbjct: 106 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 142


>gb|EMJ00137.1| hypothetical protein PRUPE_ppa013019mg [Prunus persica]
          Length = 144

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RK+PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN
Sbjct: 108 RKVPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 144


>gb|EXB93550.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Morus
           notabilis]
          Length = 143

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 107 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>gb|ESW15363.1| hypothetical protein PHAVU_007G066800g [Phaseolus vulgaris]
          Length = 142

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 106 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_006421865.1| hypothetical protein CICLE_v10006171mg [Citrus clementina]
           gi|568874475|ref|XP_006490341.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 6A-like [Citrus
           sinensis] gi|557523738|gb|ESR35105.1| hypothetical
           protein CICLE_v10006171mg [Citrus clementina]
          Length = 143

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 107 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_002318240.2| hypothetical protein POPTR_0012s13610g [Populus trichocarpa]
           gi|550327061|gb|EEE96460.2| hypothetical protein
           POPTR_0012s13610g [Populus trichocarpa]
          Length = 183

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 147 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 183


>ref|XP_006857886.1| hypothetical protein AMTR_s00069p00112860 [Amborella trichopoda]
           gi|548861988|gb|ERN19353.1| hypothetical protein
           AMTR_s00069p00112860 [Amborella trichopoda]
          Length = 144

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 108 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 144


>ref|XP_004982505.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Setaria italica]
          Length = 143

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 107 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>gb|EOY23108.1| DNA-directed RNA polymerase II subunit protein isoform 3 [Theobroma
           cacao]
          Length = 143

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 107 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>gb|EOY23107.1| DNA-directed RNA polymerase II subunit protein isoform 2 [Theobroma
           cacao]
          Length = 138

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 102 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 138


>gb|EOY23106.1| DNA-directed RNA polymerase II subunit protein isoform 1 [Theobroma
           cacao]
          Length = 143

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 107 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_004493541.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2-like [Cicer arietinum]
          Length = 145

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 109 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 145


>gb|EMJ05946.1| hypothetical protein PRUPE_ppa013037mg [Prunus persica]
          Length = 143

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 107 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>gb|AFK45089.1| unknown [Lotus japonicus]
          Length = 80

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 44  RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 80


>gb|AFK33543.1| unknown [Lotus japonicus]
          Length = 144

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 108 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 144


>ref|XP_003536478.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           6A-like [Glycine max]
          Length = 142

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 106 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|NP_001236044.1| uncharacterized protein LOC100305739 [Glycine max]
           gi|255626491|gb|ACU13590.1| unknown [Glycine max]
          Length = 142

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 106 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
           communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
           polymerase subunit rpb6, putative [Ricinus communis]
          Length = 124

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 88  RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 124


>ref|XP_002322450.1| DNA-directed RNA polymerase II family protein [Populus trichocarpa]
           gi|222869446|gb|EEF06577.1| DNA-directed RNA polymerase
           II family protein [Populus trichocarpa]
          Length = 143

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 107 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>gb|ACJ84175.1| unknown [Medicago truncatula]
          Length = 145

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = -3

Query: 305 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGN 195
           RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG+
Sbjct: 109 RKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 145