BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00008830
         (777 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   238   2e-60
emb|CBI22243.3| unnamed protein product [Vitis vinifera]              235   1e-59
ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containi...   233   7e-59
gb|EMJ16874.1| hypothetical protein PRUPE_ppa003946mg [Prunus pe...   226   9e-57
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi...   225   1e-56
gb|EMT15401.1| hypothetical protein F775_20334 [Aegilops tauschii]    224   3e-56
ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containi...   224   3e-56
ref|XP_006338776.1| PREDICTED: pentatricopeptide repeat-containi...   223   7e-56
ref|XP_004232214.1| PREDICTED: pentatricopeptide repeat-containi...   221   2e-55
ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [S...   221   2e-55
ref|XP_004966840.1| PREDICTED: pentatricopeptide repeat-containi...   220   5e-55
gb|EMT08625.1| hypothetical protein F775_14245 [Aegilops tauschii]    220   5e-55
ref|XP_002324070.1| pentatricopeptide repeat-containing family p...   219   8e-55
ref|XP_002533114.1| pentatricopeptide repeat-containing protein,...   217   3e-54
gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat cont...   217   3e-54
ref|XP_006482626.1| PREDICTED: pentatricopeptide repeat-containi...   216   7e-54
ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containi...   216   7e-54
gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]        216   9e-54
ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea ma...   216   9e-54
ref|XP_006431200.1| hypothetical protein CICLE_v10011436mg [Citr...   215   1e-53

>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  238 bits (607), Expect = 2e-60
 Identities = 122/240 (50%), Positives = 160/240 (66%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  M+V+GFNS+   LR+         SG    M YA+++F  I  PD FMWNTM++G A
Sbjct: 33  HASMIVKGFNSNTSALRELIYASSIAISG---TMAYAHQLFPHITEPDTFMWNTMIRGSA 89

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
           +S  P+ A SLYS+M    V PD +TF F+L           G   H    +LGF+S+ F
Sbjct: 90  QSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTF 149

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
           VRN+LI FHA+CGDL VA ALFDG A+RDVVA +A+  G+A RG+L VARQLFDE P +D
Sbjct: 150 VRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKD 209

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMRA 8
           +VSWN+MI  Y+ RGEM+ AR++FD    RDV++WN MIAGYV  G +  A+E++EEMR+
Sbjct: 210 LVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRS 269



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
 Frame = -3

Query: 628 MDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXX 449
           M+ A K+F ++   D+  WN M+ G+       +A  ++  M      PD  T L LL  
Sbjct: 226 MESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSA 285

Query: 448 XXXXXXXXAGAQFHAVCTKLGF-DSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVA 272
                   AG + H   +++GF D    + N+LI+ +A CG +  A+ +F G   +DV  
Sbjct: 286 CTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVST 345

Query: 271 RTAVIRGHATRGDLTVARQLFDE----SPCRDVVSWNIMIAAYSARGEMDKAREMFDAAT 104
             +V+ G A  G    +  LF E        D +++  ++ A S  G +++ R+ FD   
Sbjct: 346 WNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMR 405

Query: 103 DR-----DVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
           D      ++  +  M+    + GL   A +  + M+ E
Sbjct: 406 DEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIE 443


>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  235 bits (600), Expect = 1e-59
 Identities = 121/237 (51%), Positives = 159/237 (67%)
 Frame = -3

Query: 718 MVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFARSS 539
           M+V+GFNS+   LR+         SG    M YA+++F  I  PD FMWNTM++G A+S 
Sbjct: 1   MIVKGFNSNTSALRELIYASSIAISG---TMAYAHQLFPHITEPDTFMWNTMIRGSAQSP 57

Query: 538 PPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAFVRN 359
            P+ A SLYS+M    V PD +TF F+L           G   H    +LGF+S+ FVRN
Sbjct: 58  SPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRN 117

Query: 358 SLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRDVVS 179
           +LI FHA+CGDL VA ALFDG A+RDVVA +A+  G+A RG+L VARQLFDE P +D+VS
Sbjct: 118 TLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVS 177

Query: 178 WNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMRA 8
           WN+MI  Y+ RGEM+ AR++FD    RDV++WN MIAGYV  G +  A+E++EEMR+
Sbjct: 178 WNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRS 234



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
 Frame = -3

Query: 628 MDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXX 449
           M+ A K+F ++   D+  WN M+ G+       +A  ++  M      PD  T L LL  
Sbjct: 191 MESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSA 250

Query: 448 XXXXXXXXAGAQFHAVCTKLGF-DSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVA 272
                   AG + H   +++GF D    + N+LI+ +A CG +  A+ +F G   +DV  
Sbjct: 251 CTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVST 310

Query: 271 RTAVIRGHATRGDLTVARQLFDE----SPCRDVVSWNIMIAAYSARGEMDKAREMFDAAT 104
             +V+ G A  G    +  LF E        D +++  ++ A S  G +++ R+ FD   
Sbjct: 311 WNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMR 370

Query: 103 DR-----DVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
           D      ++  +  M+    + GL   A +  + M+ E
Sbjct: 371 DEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIE 408


>ref|XP_003560882.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Brachypodium distachyon]
          Length = 508

 Score =  233 bits (593), Expect = 7e-59
 Identities = 121/239 (50%), Positives = 155/239 (64%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           HG +VV+G  S  +PLR+         +G    MDYA KVF  I+ PDLFM N M++G+A
Sbjct: 17  HGNLVVKGITSRLQPLRELLLACVASFNG---GMDYARKVFDGISHPDLFMHNVMVRGYA 73

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
            S+ P  AF LY R+  A + PD +TF +LL          AG Q H    KLG+  DAF
Sbjct: 74  HSAAPAAAFVLYRRIEAARLKPDSFTFCYLLRACAGLPGSCAGYQVHGAVVKLGYFKDAF 133

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
           VRN+LIN HA CGDL VA  L D    RDVVAR+AVI GHA +G+L +ARQLFDE   +D
Sbjct: 134 VRNALINMHAKCGDLLVAGTLLDEAGERDVVARSAVIAGHAAKGELDIARQLFDECQHKD 193

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMR 11
           +V WN+M+AAY+  GEM+KAR + D A ++DV+SWNT+I GY  +GL   A+EV +EMR
Sbjct: 194 LVCWNVMVAAYAKYGEMEKARGLLDRAPEKDVVSWNTIITGYTAKGLLKEALEVLDEMR 252



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 9/217 (4%)
 Frame = -3

Query: 628 MDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXX 449
           M+ A  +  +    D+  WNT++ G+        A  +   M    + PD  T + LL  
Sbjct: 210 MEKARGLLDRAPEKDVVSWNTIITGYTAKGLLKEALEVLDEMRCVGLMPDEATIVSLLSC 269

Query: 448 XXXXXXXXAGAQFHAVCTKLGFDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVAR 269
                    G   H++  +          N+L++ +A CGD+  AM +F     RDV   
Sbjct: 270 CANLGSLGTGRMIHSLHLEGRPCISILPGNALVSMYAKCGDVQAAMEVFSRMKERDVWTW 329

Query: 268 TAVIRGHATRGDLTVARQLF----DESPCRDVVSWNIMIAAYSARGEMDKAREMFDAATD 101
            ++I G A  G    + Q F    DE  C + +S+  ++ A S  G ++  +  F    +
Sbjct: 330 NSIIGGLAFHGQAEQSVQFFNKMLDEGLCPNEISFLCVLGACSHAGLVEDGQRYFSLMIN 389

Query: 100 RDVIS-----WNTMIAGYVQRGLHGHAMEVYEEMRAE 5
           R  I      ++ ++    + GL   A  +   MR E
Sbjct: 390 RYRIEPNARHYSCIVDMLGRSGLLDEAFAIVSSMRCE 426


>gb|EMJ16874.1| hypothetical protein PRUPE_ppa003946mg [Prunus persica]
          Length = 539

 Score =  226 bits (575), Expect = 9e-57
 Identities = 112/240 (46%), Positives = 153/240 (63%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  MVV GFNS+   +R          SG    +DYA+++F  +A PD FMWNTM++G A
Sbjct: 33  HASMVVNGFNSNYSAIRQLIFAGAMAISG---TIDYAHQLFVHVAEPDTFMWNTMIRGSA 89

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
           +S  P+ A  LY+RM   +  PD +TF F+L           G   H    + GF+S+ F
Sbjct: 90  QSQNPLNAIVLYTRMENRHAMPDSFTFPFILKACTKLSWVKMGMGIHGKVVRFGFESNTF 149

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
           VRN+LI FHA+CGDL +A  LFD  A+RDVV  +A+  G+A RG L  ARQLFDE P +D
Sbjct: 150 VRNTLIYFHANCGDLKIASELFDASAKRDVVPWSALTAGYARRGKLDEARQLFDEMPVKD 209

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMRA 8
           +VSWN+MI  Y  +GEM+ AR++FD   +RDV++WN MIAGYV  G +  A++++EEMR+
Sbjct: 210 LVSWNVMITGYGKQGEMESARKLFDKVPERDVVTWNAMIAGYVLCGSNEQALQMFEEMRS 269



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 10/223 (4%)
 Frame = -3

Query: 643 GRDINMDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFL 464
           G+   M+ A K+F ++   D+  WN M+ G+       +A  ++  M      PD  T L
Sbjct: 221 GKQGEMESARKLFDKVPERDVVTWNAMIAGYVLCGSNEQALQMFEEMRSLGEKPDEVTML 280

Query: 463 FLLXXXXXXXXXXAGAQFHAVCTKLG-FDSDAFVRNSLINFHASCGDLTVAMALFDGPAR 287
            LL           G + H+   ++G  D    + N+LI+ ++ CG +  A+ +F     
Sbjct: 281 SLLSACTDIGDLDVGQKIHSALLEMGRGDMSIILGNALIDMYSKCGSIERAVEVFQKMRD 340

Query: 286 RDVVARTAVIRGHATRGDLTVARQLFDESPCRDV----VSWNIMIAAYSARGEMDKAREM 119
           +DV +  +VI G A  G    +  LF+E     +    +++  ++ A S  G++++ R  
Sbjct: 341 KDVSSWNSVIGGLAFHGHAEESVNLFEEMRRLKIRPNEITFVGVLVACSHAGKVEEGRRY 400

Query: 118 FDAATDR-----DVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
           F+    +     ++  +  M+    + GL   A E  E+M  E
Sbjct: 401 FNLMKHKYKIEPNIKHYGCMVDMLGRAGLLDEAFEFIEKMEIE 443


>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 542

 Score =  225 bits (573), Expect = 1e-56
 Identities = 115/239 (48%), Positives = 154/239 (64%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  ++V G NS    LR+         SG    MDYA+++FAQI+ PD+FMWNTM++G A
Sbjct: 33  HAFLIVNGLNSTTSVLRELIFVSAIVVSG---TMDYAHQLFAQISQPDIFMWNTMIRGSA 89

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
           ++  P  A SLY++M    V PD +TF F+L           G   H    K GF S+ F
Sbjct: 90  QTLKPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTF 149

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
           VRN+LI FHA+CGDL  A ALFD  A+R+VV  +A+  G+A RG L VARQLFDE P +D
Sbjct: 150 VRNTLIYFHANCGDLATARALFDASAKREVVPWSALTAGYARRGKLDVARQLFDEMPMKD 209

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMR 11
           +VSWN+MI AY+  GEM+KAR++FD    +DV++WN MIAGYV   L+  A+E+++ MR
Sbjct: 210 LVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMR 268



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
 Frame = -3

Query: 628 MDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXX 449
           M+ A K+F ++   D+  WN M+ G+  S     A  ++  M      PD  T L +L  
Sbjct: 226 MEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSA 285

Query: 448 XXXXXXXXAGAQFH-AVCTKLGFDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVA 272
                    G + H ++      D    + N+LI+ +A CG +  A+ +F G  ++D  +
Sbjct: 286 SADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSS 345

Query: 271 RTAVIRGHATRGDLTVARQLFDE 203
             ++I G A  G    +  LF E
Sbjct: 346 WNSIIGGLALHGHAEESINLFQE 368


>gb|EMT15401.1| hypothetical protein F775_20334 [Aegilops tauschii]
          Length = 514

 Score =  224 bits (571), Expect = 3e-56
 Identities = 118/239 (49%), Positives = 151/239 (63%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           HG +VV+G  S  +PLRD          G    M YA KVF  I  PDLFM N M++G+A
Sbjct: 18  HGNLVVKGIASRPQPLRDLLLACVGSFRG---TMGYARKVFDGIPHPDLFMHNVMVRGYA 74

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
               P  AF+LY R+  A + PD +TF +LL          AG Q H V  KLGF SDAF
Sbjct: 75  HGGAPAAAFALYRRIGAAGLRPDAFTFCYLLRASAGLSGSCAGCQVHGVVVKLGFLSDAF 134

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
           VRN+LIN HA CGDL +A AL D     DVVA +AVI G+A RGDL +ARQLFD+   +D
Sbjct: 135 VRNALINMHAKCGDLQLAGALLDEAGEGDVVAWSAVIAGNAARGDLGIARQLFDDCRHKD 194

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMR 11
           +V WN+M+AAY+  G+M+KARE+ D   + DV+SWNT+I GY  +G+   A+EV +EM+
Sbjct: 195 LVCWNVMVAAYAKHGDMEKARELIDRVPETDVVSWNTIITGYSTKGMLKEALEVLDEMK 253


>ref|XP_004306131.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Fragaria vesca subsp. vesca]
          Length = 540

 Score =  224 bits (571), Expect = 3e-56
 Identities = 115/238 (48%), Positives = 154/238 (64%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  MV+ GFNS+   L +         SG    + YA+KVF QI  P+ FMWNTM++G A
Sbjct: 33  HASMVIHGFNSNPSALGELIFASAMSISG---TIGYAHKVFDQITEPNTFMWNTMIRGSA 89

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
           +S  P+ A  LY+RM +  + PD +TF F+L           G   H    + GF+S+A 
Sbjct: 90  QSLRPLNAVVLYTRMEKRGLRPDDFTFPFVLKACNKLCWVRMGMGIHGKVVRFGFESNAS 149

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
           VRN+LI+FHA CGDL VA ALFDG ARRDVVA +A+  G+A RG L  AR+LFDE P +D
Sbjct: 150 VRNTLIDFHAKCGDLRVATALFDGSARRDVVAWSALTAGYARRGKLDAARRLFDEMPVKD 209

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEM 14
           +VSWN+MI  Y+ +GEM+ AR++FD    RDV++WN MIAGYV+ G    A++++EEM
Sbjct: 210 LVSWNVMITGYTKQGEMESARKLFDEVPRRDVVTWNAMIAGYVRCGCVEQALQMFEEM 267



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
 Frame = -3

Query: 628 MDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXX 449
           M+ A K+F ++   D+  WN M+ G+ R     +A  ++  M      PD  T L LL  
Sbjct: 226 MESARKLFDEVPRRDVVTWNAMIAGYVRCGCVEQALQMFEEMTSLGEKPDEVTMLSLLSA 285

Query: 448 XXXXXXXXAGAQFHAVCTKLGFDSDAFVR-NSLINFHASCGDLTVAMALFDGPARRDVVA 272
                    G + H+   +LG    + +  N+LI+ ++ CG +  A+ +F G   +DV +
Sbjct: 286 CADVGELEIGKRLHSSLLELGSGEISIIHGNALIDMYSKCGSIERALEVFWGMREKDVSS 345

Query: 271 RTAVIRGHATRGDLTVARQLFDE----SPCRDVVSWNIMIAAYSARGEMDKAREMFDAAT 104
             +VI G A  G    +  LF+E        D +++  ++ A S  G+++  R  F    
Sbjct: 346 WNSVIGGLAFHGHAEESVNLFEEMRRLKVRPDGITFVGVLVACSHAGKVEDGRGYFSLMR 405

Query: 103 DR-----DVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
           ++     ++  +  M+    + GL   A +  E M  +
Sbjct: 406 NKYKIEPNIKHYGCMVDLLGRAGLLDEAFDCIENMEMQ 443


>ref|XP_006338776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Solanum tuberosum]
          Length = 539

 Score =  223 bits (567), Expect = 7e-56
 Identities = 114/239 (47%), Positives = 157/239 (65%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  M++ GFNS+   LR+         S    ++ YA+K+FAQI  PDLFMWNTML+G A
Sbjct: 33  HALMIINGFNSNRIALRELIHASAVTFSA---SIHYAHKLFAQITQPDLFMWNTMLRGSA 89

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
           +S  P  A S+Y++M + ++ PD YTF FLL          +G   H    K GF+S+ F
Sbjct: 90  QSHRPSLAVSVYTQMEKRSILPDSYTFPFLLKACTKLSWLVSGLTVHGKIVKHGFESNKF 149

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
            RN+LI FHA+ GD+ +A  LFDG A+RDVVA +A+  G+A RG+L  AR+LFD+ P +D
Sbjct: 150 ARNTLIYFHANVGDIRIAGQLFDGSAKRDVVAWSALTAGYARRGELDAARRLFDDMPVKD 209

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMR 11
           +VSWN+MI  Y  +G+M+ AREMFD    RDV++WN MI+GYV  G +  A+++YEEMR
Sbjct: 210 LVSWNVMITGYVKQGKMENAREMFDIVPKRDVVTWNAMISGYVLCGENEKALKMYEEMR 268


>ref|XP_004232214.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Solanum lycopersicum]
          Length = 539

 Score =  221 bits (564), Expect = 2e-55
 Identities = 114/239 (47%), Positives = 155/239 (64%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  M++ GFNS+   LR+         S    ++ YA+K+FAQI  PDLFMWNTML+G A
Sbjct: 33  HALMIINGFNSNRIALRELIYASAVTFSA---SIHYAHKLFAQITQPDLFMWNTMLRGSA 89

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
           +S  P  A S+Y+ M + ++ PD YTF FLL          +G   H    K GF+S+ F
Sbjct: 90  QSHRPSLAVSVYTHMEKRSIRPDSYTFPFLLKACTKLSWLVSGLVVHGKIVKHGFESNKF 149

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
            RN+LI FHA+ GD+ +A  LFDG A+RDVVA +A+  G+A RG L  AR+LFD+ P +D
Sbjct: 150 ARNTLIYFHANVGDIRIAGQLFDGSAKRDVVAWSALTAGYARRGKLDAARRLFDDMPVKD 209

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMR 11
           +VSWN+MI  Y  +G+MD ARE+FD    RDV++WN MI+GYV  G +  A+++YEEMR
Sbjct: 210 LVSWNVMITGYVKQGKMDNARELFDIVPKRDVVTWNAMISGYVLCGENEKALKMYEEMR 268



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 10/215 (4%)
 Frame = -3

Query: 628 MDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXX 449
           MD A ++F  +   D+  WN M+ G+       +A  +Y  M  A   PD  T L LL  
Sbjct: 226 MDNARELFDIVPKRDVVTWNAMISGYVLCGENEKALKMYEEMRGAGEYPDEVTMLHLLSA 285

Query: 448 XXXXXXXXAGAQFHAVCTKLGF-DSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVA 272
                    G   H    ++G  +   F+ N+L++ +A CG +  A+ +F G   +DV +
Sbjct: 286 CTDSAFLDVGELIHRSIIEMGAGELSVFLGNALVDMYARCGSIRKALEVFQGMKEKDVSS 345

Query: 271 RTAVIRGHATRGDLTVARQLFDESPCRDVVSWNI----MIAAYSARGEMDKAREMF---- 116
              +I G A  G       LF++      +   I    ++ A S  G++D  RE F    
Sbjct: 346 WNIIILGLAFHGHSEECISLFEDMRRMKYIPNEITFVGVLVACSHAGKVDDGREYFSMMR 405

Query: 115 -DAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEM 14
            D   + ++  +  M+    + GL   A E    M
Sbjct: 406 TDYNIETNIRHYGCMVDMLARAGLLNEAFEFINTM 440


>ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
           gi|241919651|gb|EER92795.1| hypothetical protein
           SORBIDRAFT_01g045970 [Sorghum bicolor]
          Length = 531

 Score =  221 bits (564), Expect = 2e-55
 Identities = 121/246 (49%), Positives = 153/246 (62%), Gaps = 6/246 (2%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  MV++GF S    LR+          G      +A  VF +I  PD FM+NT+++G A
Sbjct: 28  HALMVLRGFLSDPSALRELIFASSVGVRG---GTAHARLVFDRIPHPDRFMYNTLIRGAA 84

Query: 547 RSSPPMRAFSLYSRMLR------ANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLG 386
            S  P  A S+Y+RM R        V PD  TF F+L           GAQ HA   K G
Sbjct: 85  HSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETGAQVHAHVVKAG 144

Query: 385 FDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFD 206
            +SDAFVRN+LI  HA+CGDL  A ALFDG AR D VA +A+I G A RGD+  AR+LFD
Sbjct: 145 CESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELFD 204

Query: 205 ESPCRDVVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEV 26
           ESP +D+VSWN+MI AY+  G+M  ARE+FD A DRDV+SWN MI+GYV+ G H  AME+
Sbjct: 205 ESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMEL 264

Query: 25  YEEMRA 8
           +E+M+A
Sbjct: 265 FEQMQA 270



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 13/222 (5%)
 Frame = -3

Query: 631 NMDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLX 452
           +M  A ++F      D+  WN M+ G+ R     +A  L+ +M      PD  T L LL 
Sbjct: 226 DMAPARELFDGAPDRDVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLS 285

Query: 451 XXXXXXXXXAGAQFHAVC----TKLGFDSDAFVRNSLINFHASCGDLTVAMALFDGPARR 284
                    AG + H       +++G      + N+LI+ +A CG +T A+ +F     +
Sbjct: 286 ACADSGDMDAGRRLHRFLSGRFSRIG--PSTVLGNALIDMYAKCGSMTSALEVFWLMQDK 343

Query: 283 DVVARTAVIRGHATRGDLTVARQLFDE----SPCRDVVSWNIMIAAYSARGEMDKAREMF 116
           +V    ++I G A  G +T A  +F +    +   D +++  ++ A S  G +DK  E F
Sbjct: 344 NVSTWNSIIGGLALHGHVTEAIDVFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYF 403

Query: 115 DAATDRDVISWNT-----MIAGYVQRGLHGHAMEVYEEMRAE 5
           +    R +I  N      M+    + GL   A E    M+ E
Sbjct: 404 NLMQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFEFIGTMKIE 445


>ref|XP_004966840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Setaria italica]
          Length = 519

 Score =  220 bits (560), Expect = 5e-55
 Identities = 120/246 (48%), Positives = 156/246 (63%), Gaps = 7/246 (2%)
 Frame = -3

Query: 727 HGCMVVQGFNSHG-KPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVP--DLFMWNTMLQ 557
           HG +VV G  S G +P+RD          G    MDYA ++F  I  P  DLFM N ML+
Sbjct: 18  HGNLVVSGITSRGLQPVRDILLSCIVSFRG---GMDYARRLFDGIPPPGPDLFMHNAMLR 74

Query: 556 GFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGA----QFHAVCTKL 389
           G+A +  P  AF+LYSRM    + PD +TF +LL           G+    Q HAV  KL
Sbjct: 75  GYAHAGAPHAAFALYSRMEAVGLRPDGFTFCYLLRACCAGIGMPVGSSAGWQVHAVVVKL 134

Query: 388 GFDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLF 209
           GF  DAFVRN+LIN HA CGDL VA  L    + RD+VA +AVI G+A RG+L VARQ+F
Sbjct: 135 GFLEDAFVRNALINMHAKCGDLGVAGTLLGEASERDIVAWSAVIAGNAARGNLDVARQMF 194

Query: 208 DESPCRDVVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAME 29
           D+   +DVV WN+M+ AY+  GEM+KARE+FD A ++DV+SWNT+I GY  +G+   A+E
Sbjct: 195 DQCRHKDVVCWNVMLGAYAKNGEMEKARELFDCAPEKDVVSWNTIITGYSTQGMLEQALE 254

Query: 28  VYEEMR 11
           V++EMR
Sbjct: 255 VFDEMR 260



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 4/181 (2%)
 Frame = -3

Query: 628 MDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXX 449
           M+ A ++F      D+  WNT++ G++      +A  ++  M  A   PD  T + LL  
Sbjct: 218 MEKARELFDCAPEKDVVSWNTIITGYSTQGMLEQALEVFDEMRGAGWMPDDATIVSLLSC 277

Query: 448 XXXXXXXXAGAQFHAVCTKLGFDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVAR 269
                   AG   H+   + G        N+L++ +A CGD+  AM +F     +DV   
Sbjct: 278 CANVGSLDAGRMIHSWHLE-GRRLSILTGNALVSMYAKCGDVNTAMEVFSRMEEKDVWTW 336

Query: 268 TAVIRGHATRGDLTVARQLF----DESPCRDVVSWNIMIAAYSARGEMDKAREMFDAATD 101
            ++I G A  G    + Q F    DE    + +S+  +++A S  G ++  +  F    +
Sbjct: 337 NSIIGGLALHGQAEKSVQFFSKMLDEKMHPNEISFLCVLSACSHAGLVEDGQRYFSLMKE 396

Query: 100 R 98
           R
Sbjct: 397 R 397


>gb|EMT08625.1| hypothetical protein F775_14245 [Aegilops tauschii]
          Length = 581

 Score =  220 bits (560), Expect = 5e-55
 Identities = 120/243 (49%), Positives = 156/243 (64%), Gaps = 4/243 (1%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  +V++GF S    LR+          G    + +A  VF QI  PDLFM+NT+++G A
Sbjct: 61  HTLLVLRGFLSDPSALRELLFASAVAVRGA---IAHAYHVFDQIPHPDLFMYNTLIRGAA 117

Query: 547 RSSPPMRAFSLYSRMLRAN----VSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFD 380
            +S P  A SLY+RM R +    V PD  TF F+L           GAQ HA   K G +
Sbjct: 118 HTSAPRDAVSLYARMARLSSCGGVRPDKITFPFVLRACTAMGAGGTGAQVHAHVVKAGLE 177

Query: 379 SDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDES 200
           SDAFV+N+LI  HASCG+L VA ALFD  AR D VA +A+I G A RGD+  AR+LFDE 
Sbjct: 178 SDAFVKNALIGMHASCGELGVAGALFDLRAREDAVAWSAMISGCARRGDIGAARELFDEC 237

Query: 199 PCRDVVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYE 20
           P +D+VSWN+MI AY+ RGEM  ARE+FD A +RDV+ WN MI+GYV+ G H HAM+++E
Sbjct: 238 PVKDLVSWNVMITAYAKRGEMAPARELFDQAPERDVVCWNAMISGYVRCGSHKHAMDLFE 297

Query: 19  EMR 11
           +M+
Sbjct: 298 QMQ 300



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 11/216 (5%)
 Frame = -3

Query: 619 ANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXX 440
           A ++F Q    D+  WN M+ G+ R      A  L+ +M R    PDV T L LL     
Sbjct: 261 ARELFDQAPERDVVCWNAMISGYVRCGSHKHAMDLFEQMQRMGKKPDVITMLSLLSACAD 320

Query: 439 XXXXXAGAQFHAVCTK--LGFDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVART 266
                 G + H+  ++   G      + N+LI+ +A CG +  A+ +F     +DV    
Sbjct: 321 SGDLDVGRRLHSSLSEKFSGSGFTVVLGNALIHMYAKCGSMKSALEVFRVMRDKDVSTWN 380

Query: 265 AVIRGHATRG----DLTVARQLFDESPCRDVVSWNIMIAAYSARGEMDKAREMFDAATDR 98
           ++I G A  G     + V +++  E    D +++  ++ A S  G++DK RE F     +
Sbjct: 381 SIIGGLALHGHALDSINVFKKMLKERVRPDEITFVAVLIACSHGGKVDKGREYFKLMQQQ 440

Query: 97  -----DVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
                +V  +  M+    + GL   A E  + M+ E
Sbjct: 441 YRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDTMKVE 476


>ref|XP_002324070.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222867072|gb|EEF04203.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 546

 Score =  219 bits (558), Expect = 8e-55
 Identities = 109/239 (45%), Positives = 155/239 (64%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  ++++GFNS+   LR+         SG    ++YA++VFAQI  PD+FMWNTM++G +
Sbjct: 33  HATLIIKGFNSNRAALRELIFAGAMTISGA---INYAHQVFAQITEPDIFMWNTMMRGSS 89

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
           +S  P +   LY++M    V PD +TF FLL           G   H    K GF+ ++F
Sbjct: 90  QSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTGFCVHGKVLKYGFEVNSF 149

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
           VRN+LI FH++CGDL +A ++F     R VV+ +A+  G+A RG+L VARQ+FDE P +D
Sbjct: 150 VRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALTAGYARRGELGVARQIFDEMPVKD 209

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMR 11
           +VSWN+MI  Y   GEM+ AR +FD A ++DV++WNTMIAGYV RG    A+E++EEMR
Sbjct: 210 LVSWNVMITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMR 268



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 11/219 (5%)
 Frame = -3

Query: 628 MDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXX 449
           M+ A  +F +    D+  WNTM+ G+       +A  ++  M      PD  T L LL  
Sbjct: 226 MENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSA 285

Query: 448 XXXXXXXXAGAQFHAVCTKL-GFDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVA 272
                    G + H   +++   D    + N+L++ +A CG + +A+ +F     +DV  
Sbjct: 286 CADLGDLQVGRKLHCSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTT 345

Query: 271 RTAVIRGHATRGDLTVARQLFDESPCRDVVSWNI-----MIAAYSARGEMDKAREMFDAA 107
             +VI G A  G    + +LF E      +  N      +I A S  G +++ R  F   
Sbjct: 346 WNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLM 405

Query: 106 TDR-----DVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
            +R     ++I    M+    + GL   A E+  +M  E
Sbjct: 406 RERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIE 444


>ref|XP_002533114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527077|gb|EEF29259.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  217 bits (553), Expect = 3e-54
 Identities = 105/238 (44%), Positives = 154/238 (64%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  ++++GFNS    LR+          G    +DYA+++F Q+A PD+FMWNTM++G +
Sbjct: 33  HASLIIKGFNSSSYALRELIFASAIVIPG---TIDYAHQLFDQVAEPDIFMWNTMMRGSS 89

Query: 547 RSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAF 368
           +S  P++A SLY++M    + PD +TF FLL           G   H    K GF  + F
Sbjct: 90  QSPSPIKAVSLYTQMENCGIKPDKFTFSFLLKACTRLEWRNMGFCIHGKALKHGFQENTF 149

Query: 367 VRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRD 188
           VRN+L+ +HA CGDL +A  +FD  A+RDVVA +A+  G+A RG+L +AR+LFDE P +D
Sbjct: 150 VRNTLVYYHAKCGDLGIAREMFDDSAKRDVVAWSALTAGYARRGELCMARRLFDEMPVKD 209

Query: 187 VVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEM 14
           +V+WN++I AY  RGEM  AR++F+    RDV++WN MIAG+V  G +  A+E++EEM
Sbjct: 210 LVAWNVIITAYVKRGEMACARKLFNEVPRRDVVTWNAMIAGFVHCGENEQALEMFEEM 267



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 6/187 (3%)
 Frame = -3

Query: 628 MDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXX 449
           M  A K+F ++   D+  WN M+ GF       +A  ++  M+     PD  T L LL  
Sbjct: 226 MACARKLFNEVPRRDVVTWNAMIAGFVHCGENEQALEMFEEMISVGEQPDEVTMLSLLSA 285

Query: 448 XXXXXXXXAGAQFHAVCTKLGF-DSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVA 272
                    G + H+   ++   D    + N+L   +A CG +  A+ +F G   +DV  
Sbjct: 286 CTDLGDLEVGKKVHSSILEMSLGDLSVLLGNALTYMYAKCGSIERALEVFRGMREKDVTT 345

Query: 271 RTAVIRGHATRGDLTVARQLFDESPCRDVVSWNI-----MIAAYSARGEMDKAREMFDAA 107
             +VI G A  G    +  LF E    + +  N      ++ A S  G++++ +  FD  
Sbjct: 346 WNSVIVGLALHGHAEESIHLFREMQRLNNIKPNEITFVGVLVACSHAGKVEEGQRYFDLM 405

Query: 106 TDRDVIS 86
           T+  +++
Sbjct: 406 TNLYILA 412


>gb|AAL84319.1|AC073556_36 putative pentatricopeptide repeat containing protein [Oryza sativa
           Japonica Group]
          Length = 545

 Score =  217 bits (553), Expect = 3e-54
 Identities = 117/243 (48%), Positives = 153/243 (62%), Gaps = 4/243 (1%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  M ++GF S    LR+          G    + +A  VF QI  PD FM+NT+++G A
Sbjct: 28  HAVMALRGFLSDPSELRELLFASAVAVRGA---IAHAYLVFDQIPRPDRFMYNTLIRGAA 84

Query: 547 RSSPPMRAFSLYSRMLR----ANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFD 380
            ++ P  A SLY+RMLR      V PD  TF F+L           G Q HA   K G +
Sbjct: 85  HTAAPRDAVSLYTRMLRRGGGGGVRPDKLTFPFVLRACTAMGAGDTGVQVHAHVVKAGCE 144

Query: 379 SDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDES 200
           SDAFV+N+LI  HASCG+L +A ALFDG AR D VA +A+I G A RGD+  AR LFDE 
Sbjct: 145 SDAFVKNALIGMHASCGNLGIAAALFDGRAREDAVAWSAMITGCARRGDIGAARDLFDEC 204

Query: 199 PCRDVVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYE 20
           P +D+VSWN+MI AY+ RG+M  ARE+FD   +RDV+SWN MI+GYV+ G H HA+E++E
Sbjct: 205 PVKDLVSWNVMITAYAKRGDMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFE 264

Query: 19  EMR 11
           +M+
Sbjct: 265 QMQ 267



 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 12/221 (5%)
 Frame = -3

Query: 631 NMDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLX 452
           +M  A ++F Q+   D+  WN M+ G+ R    + A  L+ +M R    PD+ T L LL 
Sbjct: 224 DMALARELFDQVPERDVVSWNVMISGYVRCGSHLHALELFEQMQRMGEKPDIVTMLSLLS 283

Query: 451 XXXXXXXXXAGAQFHAVCTKLGFDSDAF---VRNSLINFHASCGDLTVAMALFDGPARRD 281
                     G + H+  + + F  + F   + N+LI+ +A CG +  A  +F     +D
Sbjct: 284 ACADSGDLDVGQRLHSSLSDM-FSRNGFPVVLGNALIDMYAKCGSMKSAHEVFWSMRDKD 342

Query: 280 VVARTAVIRGHATRGDLTVARQLFDE----SPCRDVVSWNIMIAAYSARGEMDKAREMFD 113
           V    +++ G A  G +  +  +F++        D +++  ++ A S  G +DK RE F+
Sbjct: 343 VSTWNSIVGGLALHGHVLESIDMFEKMLKGKVRPDEITFVAVLIACSHGGMVDKGREFFN 402

Query: 112 A-----ATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
                   + ++  +  M+    + GL   A E  + M+ E
Sbjct: 403 LMQHKYRVEPNIKHYGCMVDMLGRAGLLKEAFEFIDTMKCE 443


>ref|XP_006482626.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Citrus sinensis]
          Length = 540

 Score =  216 bits (550), Expect = 7e-54
 Identities = 106/237 (44%), Positives = 154/237 (64%)
 Frame = -3

Query: 718 MVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFARSS 539
           + + GFNS    LR+          G    ++YA+K+F +I  PD FM+NT+++G A+S 
Sbjct: 31  VTINGFNSDSSALRELIYSGSVVIPGA---INYAHKMFVKITEPDTFMYNTIIRGSAQSQ 87

Query: 538 PPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAFVRN 359
            P+ A  LY++M + ++ P+ +TF F+L           G   H    K GF+ + FVRN
Sbjct: 88  NPLDAVFLYTQMEKCSIKPNKFTFSFVLKACTRLLYRNMGFCVHGKVVKYGFEFNRFVRN 147

Query: 358 SLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRDVVS 179
           SLI FHA+CGDL  A  LFDG A+ DVVA +++  G+A RG+L++AR LFDE P RD+VS
Sbjct: 148 SLIYFHANCGDLNTASVLFDGDAKMDVVAWSSLTAGYARRGELSIARSLFDEMPVRDLVS 207

Query: 178 WNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMRA 8
           WN+MI  Y+ +GEM+KA E+F+    RDV+SWN MI+GYV  G++  A+E++EEMR+
Sbjct: 208 WNVMITGYAKQGEMEKANELFNEVPKRDVVSWNAMISGYVLCGMNKQALEMFEEMRS 264


>ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Brachypodium distachyon]
          Length = 532

 Score =  216 bits (550), Expect = 7e-54
 Identities = 119/243 (48%), Positives = 154/243 (63%), Gaps = 4/243 (1%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  MV++GF S    LR+          G    + +A  VF QI  PDLFM+NT+++G A
Sbjct: 28  HALMVLRGFLSDPSALRELLFASAVAVRGA---IAHAYLVFDQIPRPDLFMYNTLIRGAA 84

Query: 547 RSSPPMRAFSLYSRMLR----ANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFD 380
            ++ P  A SLY+RM R      V PD  TF F+L           GAQ HA   K G +
Sbjct: 85  HTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVHAHVVKAGCE 144

Query: 379 SDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDES 200
           SDAFVRN+LI  HASCG+L VA ALFDG AR D VA +A+I G A RGD+  AR+LFDE 
Sbjct: 145 SDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCARRGDIVAARKLFDEC 204

Query: 199 PCRDVVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYE 20
           P +D VSWN+MI AY+ RGEM  AR +F+   +RDV+SWN MI+G+V+ G H +AME++E
Sbjct: 205 PVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMISGHVRCGSHVYAMELFE 264

Query: 19  EMR 11
           +M+
Sbjct: 265 QMQ 267



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 13/218 (5%)
 Frame = -3

Query: 619 ANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXX 440
           A  +F +I   D+  WN M+ G  R    + A  L+ +M R    PDV T L LL     
Sbjct: 228 ARVLFNRIPERDVVSWNAMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACAD 287

Query: 439 XXXXXAGAQFHAVCTKL----GFDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVA 272
                 G + H+  +++    GF     + N+LI+ +A CG +  A+ +F     +DV  
Sbjct: 288 SGDIDVGRRLHSSLSEMFLRTGF--TVILGNALIDMYAKCGSMKSALQVFWVMRDKDVST 345

Query: 271 RTAVIRGHATRG----DLTVARQLFDESPCRDVVSWNIMIAAYSARGEMDKAREMFDA-- 110
             ++I G A  G     + V +++  E    D +++  ++ A S  G +DK RE F+   
Sbjct: 346 WNSIIGGLALHGHVLESIDVFKKMLKEKVRPDEITFVAVLIACSHGGMVDKGREYFNLMQ 405

Query: 109 ---ATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
                + +V  +  M+    + GL   A E  + M+ E
Sbjct: 406 HHYRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDTMKVE 443


>gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
          Length = 537

 Score =  216 bits (549), Expect = 9e-54
 Identities = 119/247 (48%), Positives = 151/247 (61%), Gaps = 7/247 (2%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  MV+QGF S    LR+          G      +A  VF +I  PD FM+NT+++G A
Sbjct: 28  HALMVLQGFLSDSSALRELIFASAVGVRG---GTAHARLVFDRIPHPDRFMYNTLIRGAA 84

Query: 547 RSSPPMRAFSLYSRMLRANVS-------PDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKL 389
            S  P  A S+Y+RM R +         PD  TF F+L           GAQ HA   K 
Sbjct: 85  HSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAHVVKA 144

Query: 388 GFDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLF 209
           G +SDAFVRN+LI  HA+ GDL  A ALFDG AR D VA +A+I G A RGD+  AR+LF
Sbjct: 145 GCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELF 204

Query: 208 DESPCRDVVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAME 29
           DESP +D+VSWN+MI AY+  G+M  ARE+FD A DRDV+SWN MI+GYV+ G    AME
Sbjct: 205 DESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAME 264

Query: 28  VYEEMRA 8
           ++E+M+A
Sbjct: 265 LFEQMQA 271



 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 17/226 (7%)
 Frame = -3

Query: 631 NMDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLX 452
           +M  A ++F      D+  WN M+ G+ R     +A  L+ +M      PD  T L LL 
Sbjct: 227 DMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLS 286

Query: 451 XXXXXXXXXAGAQFHAVCTKLGFDSDAFVR--------NSLINFHASCGDLTVAMALFDG 296
                    AG + H      GF S  F R        N+LI+ +A CG +T A+ +F  
Sbjct: 287 ACADSGDLDAGRRLH------GFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWL 340

Query: 295 PARRDVVARTAVIRGHATRGDLT----VARQLFDESPCRDVVSWNIMIAAYSARGEMDKA 128
              ++V    ++I G A  G  T    V R++   +   D +++  ++AA S  G +DK 
Sbjct: 341 MQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKG 400

Query: 127 REMFDAATDR-----DVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
            E F     R     ++  +  M+    + GL   A E    M+ E
Sbjct: 401 HEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIE 446


>ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
           gi|219886289|gb|ACL53519.1| unknown [Zea mays]
          Length = 537

 Score =  216 bits (549), Expect = 9e-54
 Identities = 119/247 (48%), Positives = 151/247 (61%), Gaps = 7/247 (2%)
 Frame = -3

Query: 727 HGCMVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFA 548
           H  MV+QGF S    LR+          G      +A  VF +I  PD FM+NT+++G A
Sbjct: 28  HALMVLQGFLSDSSALRELIFASAVGVRG---GTAHARLVFDRIPHPDRFMYNTLIRGAA 84

Query: 547 RSSPPMRAFSLYSRMLRANVS-------PDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKL 389
            S  P  A S+Y+RM R +         PD  TF F+L           GAQ HA   K 
Sbjct: 85  HSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGETGAQVHAHVVKA 144

Query: 388 GFDSDAFVRNSLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLF 209
           G +SDAFVRN+LI  HA+ GDL  A ALFDG AR D VA +A+I G A RGD+  AR+LF
Sbjct: 145 GCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFARRGDIGAARELF 204

Query: 208 DESPCRDVVSWNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAME 29
           DESP +D+VSWN+MI AY+  G+M  ARE+FD A DRDV+SWN MI+GYV+ G    AME
Sbjct: 205 DESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAME 264

Query: 28  VYEEMRA 8
           ++E+M+A
Sbjct: 265 LFEQMQA 271



 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 17/226 (7%)
 Frame = -3

Query: 631 NMDYANKVFAQIAVPDLFMWNTMLQGFARSSPPMRAFSLYSRMLRANVSPDVYTFLFLLX 452
           +M  A ++F      D+  WN M+ G+ R     +A  L+ +M      PD  T L LL 
Sbjct: 227 DMAPARELFDGAPDRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLS 286

Query: 451 XXXXXXXXXAGAQFHAVCTKLGFDSDAFVR--------NSLINFHASCGDLTVAMALFDG 296
                    AG + H      GF S  F R        N+LI+ +A CG +T A+ +F  
Sbjct: 287 ACADSGDLDAGRRLH------GFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWL 340

Query: 295 PARRDVVARTAVIRGHATRGDLT----VARQLFDESPCRDVVSWNIMIAAYSARGEMDKA 128
              ++V    ++I G A  G  T    V R++   +   D +++  ++AA S  G +DK 
Sbjct: 341 MQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKG 400

Query: 127 REMFDAATDR-----DVISWNTMIAGYVQRGLHGHAMEVYEEMRAE 5
            E F     R     ++  +  M+    + GL   A E    M+ E
Sbjct: 401 HEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIE 446


>ref|XP_006431200.1| hypothetical protein CICLE_v10011436mg [Citrus clementina]
           gi|557533257|gb|ESR44440.1| hypothetical protein
           CICLE_v10011436mg [Citrus clementina]
          Length = 540

 Score =  215 bits (548), Expect = 1e-53
 Identities = 106/237 (44%), Positives = 154/237 (64%)
 Frame = -3

Query: 718 MVVQGFNSHGKPLRDXXXXXXXXXSGRDINMDYANKVFAQIAVPDLFMWNTMLQGFARSS 539
           + + GFNS    LR+          G    ++YA+K+F +I  PD FM+NT+++G A+S 
Sbjct: 31  VTINGFNSDSSALRELIYSGSVVIPGA---INYAHKMFVKITEPDTFMYNTIIRGSAQSQ 87

Query: 538 PPMRAFSLYSRMLRANVSPDVYTFLFLLXXXXXXXXXXAGAQFHAVCTKLGFDSDAFVRN 359
            P+ A  LY++M + ++ P+ +TF F+L           G   H    K GF+ + FVRN
Sbjct: 88  NPLDAVFLYTQMEKCSIKPNKFTFSFVLKACTRLLYRNMGFCVHGKIVKYGFEFNRFVRN 147

Query: 358 SLINFHASCGDLTVAMALFDGPARRDVVARTAVIRGHATRGDLTVARQLFDESPCRDVVS 179
           SLI FHA+CGDL  A  LFDG A+ DVVA +++  G+A RG+L++AR LFDE P RD+VS
Sbjct: 148 SLIYFHANCGDLNTASVLFDGDAKMDVVAWSSLTAGYARRGELSMARSLFDEMPVRDLVS 207

Query: 178 WNIMIAAYSARGEMDKAREMFDAATDRDVISWNTMIAGYVQRGLHGHAMEVYEEMRA 8
           WN+MI  Y+ +GEM+KA E+F+    RDV+SWN MI+GYV  G++  A+E++EEMR+
Sbjct: 208 WNVMITGYAKQGEMEKANELFNEVPKRDVVSWNAMISGYVLCGMNKQALEMFEEMRS 264