BLASTX nr result
ID: Zingiber25_contig00008795
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00008795
(742 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japo... 118 2e-24
ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein... 113 7e-23
gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indi... 113 7e-23
ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group] g... 113 7e-23
gb|EMT02912.1| RNA polymerase-associated RTF1-like protein [Aegi... 112 2e-22
dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare] 111 2e-22
gb|EMS56445.1| RNA polymerase-associated protein RTF1-like prote... 111 3e-22
ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein... 110 4e-22
ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein... 106 7e-21
gb|ABB55288.1| sucrose transporter [Asparagus officinalis] 97 6e-18
ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea ma... 96 9e-18
ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293... 96 1e-17
ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [S... 92 2e-16
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 89 1e-15
ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein... 87 8e-15
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote... 84 6e-14
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe... 84 6e-14
ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [A... 81 3e-13
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 81 3e-13
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 81 3e-13
>gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
Length = 653
Score = 118 bits (296), Expect = 2e-24
Identities = 73/141 (51%), Positives = 83/141 (58%), Gaps = 4/141 (2%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXXAPSVGSDLYKDDADKEE 509
R SGSQ+P+KKR PE G APSVGSDLYKD+ DKE+
Sbjct: 84 RPPSGSQVPLKKRHQ-PEKG--------------GGRGGGGDSAPSVGSDLYKDEDDKEQ 128
Query: 510 LGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPP----GRSAARN 677
L KMSELDREMILAER +IDDYKLK+ PPP RS+AR
Sbjct: 129 LEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSSPPPPPSRARSSART 188
Query: 678 DKTAAKSALNELRAKRMRQQD 740
D++AAKSAL+ELRAKRMRQQD
Sbjct: 189 DRSAAKSALDELRAKRMRQQD 209
>ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Brachypodium distachyon]
Length = 658
Score = 113 bits (282), Expect = 7e-23
Identities = 68/141 (48%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXX--APSVGSDLYKDDADK 503
R+ SGSQ+P+KKR + G APSVGSDLYKD+ DK
Sbjct: 65 RQPSGSQVPLKKRHQTEKGGGGGGYDDDGDLDDEARRCGGEDSDSAPSVGSDLYKDEDDK 124
Query: 504 EELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPP--PGRSAARN 677
E+L M+EL REMILAERST+ID+YKLKK P PP RS+ R
Sbjct: 125 EQLENMTELQREMILAERSTRIDEYKLKKKLARTATTSKTEARKDSPPPPLSRSRSSTRT 184
Query: 678 DKTAAKSALNELRAKRMRQQD 740
D++A KSAL+ELRAKRMRQQD
Sbjct: 185 DRSATKSALDELRAKRMRQQD 205
>gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
Length = 780
Score = 113 bits (282), Expect = 7e-23
Identities = 73/155 (47%), Positives = 83/155 (53%), Gaps = 18/155 (11%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESG--------------TXXXXXXXXXXXXXXXXXXXXXXAPS 467
R SGSQ+P+KKR PE G APS
Sbjct: 183 RPPSGSQVPLKKRHQ-PEKGGGRGGGGGGWKEGDDDDDDDDDDELDEGRRSGDDSDSAPS 241
Query: 468 VGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPV 647
VGSDLYKD+ DKE+L KMSELDREMILAER +IDDYKLK+
Sbjct: 242 VGSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSS 301
Query: 648 PPP----GRSAARNDKTAAKSALNELRAKRMRQQD 740
PPP RS+AR D++AAKSAL+ELRAKRMRQQD
Sbjct: 302 PPPPPSRARSSARTDRSAAKSALDELRAKRMRQQD 336
>ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group]
gi|113649443|dbj|BAF29955.1| Os12g0535900, partial
[Oryza sativa Japonica Group]
Length = 599
Score = 113 bits (282), Expect = 7e-23
Identities = 73/155 (47%), Positives = 83/155 (53%), Gaps = 18/155 (11%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESG--------------TXXXXXXXXXXXXXXXXXXXXXXAPS 467
R SGSQ+P+KKR PE G APS
Sbjct: 2 RPPSGSQVPLKKRHQ-PEKGGGRGGGGGGWKEGDDDDDDDDDDELDEGRRSGDDSDSAPS 60
Query: 468 VGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPV 647
VGSDLYKD+ DKE+L KMSELDREMILAER +IDDYKLK+
Sbjct: 61 VGSDLYKDEDDKEQLEKMSELDREMILAERGARIDDYKLKQLARASSSSSKADKSRRDSS 120
Query: 648 PPP----GRSAARNDKTAAKSALNELRAKRMRQQD 740
PPP RS+AR D++AAKSAL+ELRAKRMRQQD
Sbjct: 121 PPPPPSRARSSARTDRSAAKSALDELRAKRMRQQD 155
>gb|EMT02912.1| RNA polymerase-associated RTF1-like protein [Aegilops tauschii]
Length = 661
Score = 112 bits (279), Expect = 2e-22
Identities = 68/141 (48%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXX---APSVGSDLYKDDAD 500
R +GSQ+P+KKR + G APSVGSDLYKD+ D
Sbjct: 68 RLPAGSQVPLKKRHQTGKGGGRGGGGYDDEDPDDEGRRSGGEDSDSAPSVGSDLYKDEDD 127
Query: 501 KEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG-RSAARN 677
KE+L M+EL REMILAERST+IDDYKLKK P PP R++AR
Sbjct: 128 KEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTDKARKDSPPPPPSRLRASART 187
Query: 678 DKTAAKSALNELRAKRMRQQD 740
D++A KSAL+ELRAKRMRQQD
Sbjct: 188 DRSATKSALDELRAKRMRQQD 208
>dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 661
Score = 111 bits (278), Expect = 2e-22
Identities = 68/141 (48%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXX---APSVGSDLYKDDAD 500
R GSQ+P+KKR + G APSVGSDLYKD+ D
Sbjct: 68 RLPPGSQVPLKKRHQTEKGGGRGGGGYDDEDPDDDGRRSGGEDSDSAPSVGSDLYKDEDD 127
Query: 501 KEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG-RSAARN 677
KE+L M+EL REMILAERST+IDDYKLKK P PP R++AR
Sbjct: 128 KEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTDKARKDSPPPPPSRLRASART 187
Query: 678 DKTAAKSALNELRAKRMRQQD 740
D++A KSAL+ELRAKRMRQQD
Sbjct: 188 DRSATKSALDELRAKRMRQQD 208
>gb|EMS56445.1| RNA polymerase-associated protein RTF1-like protein [Triticum
urartu]
Length = 681
Score = 111 bits (277), Expect = 3e-22
Identities = 68/141 (48%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXX---APSVGSDLYKDDAD 500
R GSQ+P+KKR + G APSVGSDLYKD+ D
Sbjct: 89 RLPPGSQVPLKKRHQTGKGGGRGGGGYDDEDPDDEGRRSGGEDSDSAPSVGSDLYKDEDD 148
Query: 501 KEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG-RSAARN 677
KE+L M+EL REMILAERST+IDDYKLKK P PP R++AR
Sbjct: 149 KEQLENMTELQREMILAERSTRIDDYKLKKLARASSSKTDKARKDSPPPPPSRLRASART 208
Query: 678 DKTAAKSALNELRAKRMRQQD 740
D++A KSAL+ELRAKRMRQQD
Sbjct: 209 DRSATKSALDELRAKRMRQQD 229
>ref|XP_006664607.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryza
brachyantha]
Length = 645
Score = 110 bits (276), Expect = 4e-22
Identities = 60/96 (62%), Positives = 69/96 (71%), Gaps = 2/96 (2%)
Frame = +3
Query: 459 APSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXX 638
APSVGSDLYKD+ DKE+L K+SELDREMILAERS +IDDYKLK+
Sbjct: 100 APSVGSDLYKDEEDKEQLEKLSELDREMILAERSARIDDYKLKQLARASSSKTEKSRRDS 159
Query: 639 XPVPP--PGRSAARNDKTAAKSALNELRAKRMRQQD 740
P PP RS+ R D++AAKSAL+ELRAKRMRQQD
Sbjct: 160 SPPPPLSRARSSTRTDRSAAKSALDELRAKRMRQQD 195
>ref|XP_004962850.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Setaria
italica]
Length = 650
Score = 106 bits (265), Expect = 7e-21
Identities = 61/97 (62%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
Frame = +3
Query: 459 APSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXX 638
APSVGSDLYKD+ DKE+L KMSELDRE+ILAERS++IDDYKLK+
Sbjct: 104 APSVGSDLYKDEEDKEKLEKMSELDRELILAERSSRIDDYKLKQMARSKTGKAGARKDSS 163
Query: 639 XPVPPPG-RSAARNDK--TAAKSALNELRAKRMRQQD 740
P PP RS+ R DK +A KSALNELRAKRMRQQD
Sbjct: 164 PPPPPSRMRSSTRADKSGSATKSALNELRAKRMRQQD 200
>gb|ABB55288.1| sucrose transporter [Asparagus officinalis]
Length = 793
Score = 97.1 bits (240), Expect = 6e-18
Identities = 56/89 (62%), Positives = 59/89 (66%)
Frame = +3
Query: 459 APSVGSDLYKDDADKEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXX 638
APSVGSDLYKD+ DKEEL KMSELDREMILAERSTKIDDY LKK
Sbjct: 398 APSVGSDLYKDEEDKEELEKMSELDREMILAERSTKIDDYMLKKKARETSSKVEMKTRKE 457
Query: 639 XPVPPPGRSAARNDKTAAKSALNELRAKR 725
P P GR + R+D K ALNELRAKR
Sbjct: 458 SPPPLRGRPSLRSD----KPALNELRAKR 482
>ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea mays]
gi|223950353|gb|ACN29260.1| unknown [Zea mays]
gi|413916604|gb|AFW56536.1| plus-3 domain-containing
protein [Zea mays]
Length = 650
Score = 96.3 bits (238), Expect = 9e-18
Identities = 68/148 (45%), Positives = 78/148 (52%), Gaps = 12/148 (8%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXX-----APSVGSDLYKDD 494
RK SQ+P+KKR PE G APSVGSDLYKD+
Sbjct: 55 RKKPSSQVPLKKRHK-PEKGGRRGGGGWNDEDDEDEDGRRSGGEDSDSAPSVGSDLYKDE 113
Query: 495 ADKEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG----R 662
DKE L MSEL RE+ILAER T++DDYKLK+ PPP R
Sbjct: 114 DDKERLENMSELQRELILAERGTRLDDYKLKQRARASSSKTDKVGAPKDSSPPPPPSRMR 173
Query: 663 SAARNDK--TAAKSALNELRAK-RMRQQ 737
S+ R DK +AAKSAL+ELRAK RMRQQ
Sbjct: 174 SSTRTDKSGSAAKSALDELRAKQRMRQQ 201
>ref|NP_001145747.1| hypothetical protein [Zea mays] gi|219884293|gb|ACL52521.1| unknown
[Zea mays] gi|414878213|tpg|DAA55344.1| TPA:
hypothetical protein ZEAMMB73_654453 [Zea mays]
Length = 647
Score = 95.9 bits (237), Expect = 1e-17
Identities = 66/147 (44%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXX----APSVGSDLYKDDA 497
RK SQ+P+KKR + G APSVGSDLYKD+
Sbjct: 52 RKKPSSQVPLKKRHQPEQGGRRGSGGWKDEDDEDEDGRRSGGEDSDSAPSVGSDLYKDED 111
Query: 498 DKEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG----RS 665
DKE L MSEL REMILA+R T++DDYKLK+ PPP RS
Sbjct: 112 DKERLENMSELQREMILADRGTRLDDYKLKQRARASSSKTDKVGARKDSSPPPPPSRMRS 171
Query: 666 AARNDK--TAAKSALNELRAK-RMRQQ 737
+ R DK +AAKSAL+ELRAK RMRQQ
Sbjct: 172 STRADKSGSAAKSALDELRAKQRMRQQ 198
>ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
gi|241942942|gb|EES16087.1| hypothetical protein
SORBIDRAFT_08g017010 [Sorghum bicolor]
Length = 656
Score = 91.7 bits (226), Expect = 2e-16
Identities = 67/152 (44%), Positives = 76/152 (50%), Gaps = 16/152 (10%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXX---------APSVGSDL 482
RK SQ+P+KKR PE G APSVGSDL
Sbjct: 55 RKKPSSQVPLKKRHQ-PEKGVRRGGAGGGGGWKDEDDEDEDGRRSGGEDSDSAPSVGSDL 113
Query: 483 YKDDADKEELGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG- 659
YKD+ DKE L MSEL REMILA+R T+ DYKLK+ PPP
Sbjct: 114 YKDEDDKERLENMSELQREMILADRGTRAADYKLKQRARASLSKTDKLGARKDSSPPPPP 173
Query: 660 ---RSAARNDK--TAAKSALNELRAKR-MRQQ 737
RS+ R DK +AAKSAL+ELRAKR MRQQ
Sbjct: 174 SRMRSSTRTDKSGSAAKSALDELRAKRTMRQQ 205
>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 657
Score = 89.4 bits (220), Expect = 1e-15
Identities = 59/142 (41%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXXAPSVGSDLYKDDADKEE 509
RK SGSQ+P+KKR D E G VGSDLYKD+ D+ +
Sbjct: 57 RKPSGSQVPLKKRLDPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSDLYKDENDRRK 116
Query: 510 LGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG---RSAARN- 677
L +MSEL RE+IL++R+ K DD LK+ P P RS+AR+
Sbjct: 117 LAEMSELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSA 176
Query: 678 DKTAAK-SALNELRAKRMRQQD 740
D+ AAK ALNELRAKR++QQD
Sbjct: 177 DRAAAKDDALNELRAKRLKQQD 198
>ref|XP_004304724.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
vesca subsp. vesca]
Length = 619
Score = 86.7 bits (213), Expect = 8e-15
Identities = 58/142 (40%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXXAPSVGSDLYKDDADKEE 509
RK SGSQ+P+KKR D E VGSDLYKD+ D+ +
Sbjct: 57 RKPSGSQVPLKKRLDPSEVDDERDSQDEGDYNDSGSDRGGESNESDVGSDLYKDEDDRRK 116
Query: 510 LGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG---RSAARN- 677
L +MSEL RE+IL++R+ K DD LK+ P P RS+AR+
Sbjct: 117 LAEMSELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSA 176
Query: 678 DKTAAK-SALNELRAKRMRQQD 740
D+ AAK ALNELRAKR++QQD
Sbjct: 177 DRAAAKDDALNELRAKRLKQQD 198
>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus
notabilis]
Length = 658
Score = 83.6 bits (205), Expect = 6e-14
Identities = 58/142 (40%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXXAPSVGSDLYKDDADKEE 509
RK SGSQ+P+KKR D E VGSDLYKDD D+ +
Sbjct: 57 RKPSGSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSES--DVGSDLYKDDDDRRK 114
Query: 510 LGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG---RSAARN- 677
L +M+EL REMIL +R++K +D LK+ P P RS+AR+
Sbjct: 115 LAEMTELQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSA 174
Query: 678 DKTAAK-SALNELRAKRMRQQD 740
D+ AAK ALNELRAKR++QQD
Sbjct: 175 DRAAAKDDALNELRAKRLKQQD 196
>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
Length = 646
Score = 83.6 bits (205), Expect = 6e-14
Identities = 57/140 (40%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXXAPSVGSDLYKDDADKEE 509
RK SG+Q+P+KKR D E VGSDLYKD+ D+ +
Sbjct: 57 RKPSGTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRK 116
Query: 510 LGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG-RSAARN-DK 683
L +MSEL RE+IL++R+ K DD LK+ P+P RS+AR+ D+
Sbjct: 117 LAEMSELQRELILSDRAQKKDDKSLKE--------KFRPKKETPPLPSSRVRSSARSADR 168
Query: 684 TAAK-SALNELRAKRMRQQD 740
AAK ALNELRAKR++QQD
Sbjct: 169 AAAKDDALNELRAKRLKQQD 188
>ref|XP_006853567.1| hypothetical protein AMTR_s00032p00242160 [Amborella trichopoda]
gi|548857220|gb|ERN15034.1| hypothetical protein
AMTR_s00032p00242160 [Amborella trichopoda]
Length = 624
Score = 81.3 bits (199), Expect = 3e-13
Identities = 51/136 (37%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXXAPSVGSDLYKDDADKEE 509
RK SGSQ+P+KKRF+ + SVGSDLYKD+ D+EE
Sbjct: 63 RKPSGSQVPLKKRFETADKDDMRGKGDRDGGSDDSDSGL------SVGSDLYKDENDREE 116
Query: 510 LGKMSELDREMILAERSTKIDD-YKLKKXXXXXXXXXXXXXXXXXPVPPPGRSAARNDKT 686
L +M+EL+REMIL +R+ + D+ ++KK P GRS+A++D+
Sbjct: 117 LSRMTELEREMILTDRADRRDNLMRMKKAERQGDKSRSTGKELMAPPQARGRSSAKSDRM 176
Query: 687 AAKSALNELRAKRMRQ 734
A K AL EL AK R+
Sbjct: 177 ANKDALTELLAKMQRK 192
>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 81.3 bits (199), Expect = 3e-13
Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXXAPSVGSDLYKDDADKEE 509
RK SGSQ+P+KKR D E ++G DLYKD+ D+ +
Sbjct: 57 RKPSGSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRK 116
Query: 510 LGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG---RSAARN- 677
L +M+EL REMIL++R+TK DD L P R++AR+
Sbjct: 117 LSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSRMRASARSA 176
Query: 678 DKTAAKSALNELRAKRMRQQD 740
D++A ALNELRAKR++QQD
Sbjct: 177 DRSAKNDALNELRAKRLKQQD 197
>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform
X1 [Glycine max] gi|571466984|ref|XP_006583809.1|
PREDICTED: RNA polymerase-associated protein RTF1
homolog isoform X2 [Glycine max]
Length = 656
Score = 81.3 bits (199), Expect = 3e-13
Identities = 52/141 (36%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Frame = +3
Query: 330 RKSSGSQIPVKKRFDLPESGTXXXXXXXXXXXXXXXXXXXXXXAPSVGSDLYKDDADKEE 509
RK SGSQ+P+KKR D E ++G DLYKD+ D+ +
Sbjct: 57 RKPSGSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRK 116
Query: 510 LGKMSELDREMILAERSTKIDDYKLKKXXXXXXXXXXXXXXXXXPVPPPG---RSAARN- 677
L +M+EL REMIL++R+TK DD L P R++AR+
Sbjct: 117 LSEMTELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSRMRASARSA 176
Query: 678 DKTAAKSALNELRAKRMRQQD 740
D++A ALNELRAKR++QQD
Sbjct: 177 DRSAKNDALNELRAKRLKQQD 197