BLASTX nr result

ID: Zingiber25_contig00008527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00008527
         (649 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001143146.1| hypothetical protein [Zea mays] gi|195615030...    57   4e-06
ref|XP_004981114.1| PREDICTED: uncharacterized protein LOC101777...    57   6e-06

>ref|NP_001143146.1| hypothetical protein [Zea mays] gi|195615030|gb|ACG29345.1|
           hypothetical protein [Zea mays]
           gi|414873845|tpg|DAA52402.1| TPA: hypothetical protein
           ZEAMMB73_212253 [Zea mays]
          Length = 118

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 4/46 (8%)
 Frame = +2

Query: 20  MEVDDSFKRPGSISFKWEVQPGVPKQKNIIG----PDSPQKLCLPP 145
           M +D+SFKRPG++ FKWEVQPG+PKQ+   G    P +  +L LPP
Sbjct: 1   MTLDESFKRPGTVPFKWEVQPGIPKQQGAAGDVPPPPTSPRLALPP 46


>ref|XP_004981114.1| PREDICTED: uncharacterized protein LOC101777976 [Setaria italica]
          Length = 140

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 17/65 (26%)
 Frame = +2

Query: 20  MEVDDSFKRPGSISFKWEVQPGVPKQKNI---------------IGPDSPQKLCLPPV-- 148
           M VD+SFKRPGSI FKWEVQPG+PKQ+ +               + P +P KL LPP   
Sbjct: 1   MAVDESFKRPGSIPFKWEVQPGIPKQEELPPAAAGDSTAVPAPGLPPTTP-KLALPPAAR 59

Query: 149 LCAIS 163
           +CA++
Sbjct: 60  VCALA 64


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