BLASTX nr result
ID: Zingiber25_contig00008215
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00008215
(416 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADE77253.1| unknown [Picea sitchensis] 82 1e-13
ref|XP_004290323.1| PREDICTED: protein RMD5 homolog A-like [Frag... 79 5e-13
ref|XP_006852699.1| hypothetical protein AMTR_s00033p00020260 [A... 77 2e-12
ref|XP_006656138.1| PREDICTED: LOW QUALITY PROTEIN: protein RMD5... 77 3e-12
gb|EXB51452.1| Protein RMD5-A-like protein [Morus notabilis] 76 4e-12
ref|XP_006422667.1| hypothetical protein CICLE_v10028640mg [Citr... 76 4e-12
gb|ACR34292.1| unknown [Zea mays] gi|414870891|tpg|DAA49448.1| T... 76 5e-12
ref|NP_001149153.1| LOC100282775 [Zea mays] gi|195625124|gb|ACG3... 76 5e-12
ref|NP_001057959.1| Os06g0588900 [Oryza sativa Japonica Group] g... 75 7e-12
ref|XP_002963720.1| hypothetical protein SELMODRAFT_79692 [Selag... 75 9e-12
gb|ESW20314.1| hypothetical protein PHAVU_006G198800g [Phaseolus... 74 2e-11
gb|EMT13953.1| hypothetical protein F775_28533 [Aegilops tauschii] 74 2e-11
gb|EMS46645.1| Protein RMD5-like protein A [Triticum urartu] 74 2e-11
ref|XP_002313209.1| hypothetical protein POPTR_0009s08400g [Popu... 74 2e-11
ref|XP_004966010.1| PREDICTED: protein RMD5 homolog A-like [Seta... 74 3e-11
gb|EOX97310.1| LisH/CRA/RING-U-box domains-containing protein is... 74 3e-11
ref|XP_004485638.1| PREDICTED: protein RMD5 homolog A-like isofo... 74 3e-11
ref|XP_004485637.1| PREDICTED: protein RMD5 homolog A-like isofo... 74 3e-11
dbj|BAK03019.1| predicted protein [Hordeum vulgare subsp. vulgare] 74 3e-11
ref|XP_002454438.1| hypothetical protein SORBIDRAFT_04g030940 [S... 74 3e-11
>gb|ADE77253.1| unknown [Picea sitchensis]
Length = 384
Score = 81.6 bits (200), Expect = 1e-13
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGHVL KQSIVKLSKS+TR FKCPYCPLEA+VAQCRQL+F
Sbjct: 344 PCGHVLCKQSIVKLSKSNTRTFKCPYCPLEATVAQCRQLYF 384
>ref|XP_004290323.1| PREDICTED: protein RMD5 homolog A-like [Fragaria vesca subsp.
vesca]
Length = 390
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/41 (87%), Positives = 37/41 (90%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PC HVL KQSI+KLSKSSTR FKCPYCP EASVAQCRQLHF
Sbjct: 350 PCLHVLCKQSIMKLSKSSTRTFKCPYCPAEASVAQCRQLHF 390
>ref|XP_006852699.1| hypothetical protein AMTR_s00033p00020260 [Amborella trichopoda]
gi|548856313|gb|ERN14166.1| hypothetical protein
AMTR_s00033p00020260 [Amborella trichopoda]
Length = 389
Score = 77.0 bits (188), Expect = 2e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGHVL + SI+KLSKSS RAFKCPYCP+EA+V QCRQLHF
Sbjct: 349 PCGHVLCRGSIMKLSKSSNRAFKCPYCPMEATVLQCRQLHF 389
>ref|XP_006656138.1| PREDICTED: LOW QUALITY PROTEIN: protein RMD5 homolog A-like [Oryza
brachyantha]
Length = 387
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGHVLSKQSI+KLSKSS+R FKCPYCP EA +QC+QLHF
Sbjct: 347 PCGHVLSKQSIMKLSKSSSRPFKCPYCPSEAVASQCKQLHF 387
>gb|EXB51452.1| Protein RMD5-A-like protein [Morus notabilis]
Length = 385
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/41 (82%), Positives = 37/41 (90%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PC HVL KQSI+KLSKSSTR FKCPYCP EASVAQCRQ++F
Sbjct: 345 PCLHVLCKQSIMKLSKSSTRTFKCPYCPAEASVAQCRQIYF 385
>ref|XP_006422667.1| hypothetical protein CICLE_v10028640mg [Citrus clementina]
gi|568866916|ref|XP_006486792.1| PREDICTED: protein RMD5
homolog A-like [Citrus sinensis]
gi|557524601|gb|ESR35907.1| hypothetical protein
CICLE_v10028640mg [Citrus clementina]
Length = 385
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PC HVL KQSI+KLSKSSTR+FKCPYCP +ASVAQCRQL+F
Sbjct: 345 PCLHVLCKQSIMKLSKSSTRSFKCPYCPADASVAQCRQLYF 385
>gb|ACR34292.1| unknown [Zea mays] gi|414870891|tpg|DAA49448.1| TPA:
lisH/CRA/RING-U-box domains-containing protein isoform 1
[Zea mays] gi|414870892|tpg|DAA49449.1| TPA:
lisH/CRA/RING-U-box domains-containing protein isoform 2
[Zea mays] gi|414870893|tpg|DAA49450.1| TPA:
lisH/CRA/RING-U-box domains-containing protein isoform 3
[Zea mays] gi|414870894|tpg|DAA49451.1| TPA:
lisH/CRA/RING-U-box domains-containing protein isoform 4
[Zea mays] gi|414870895|tpg|DAA49452.1| TPA:
lisH/CRA/RING-U-box domains-containing protein isoform 5
[Zea mays]
Length = 390
Score = 75.9 bits (185), Expect = 5e-12
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGHV+SKQSI+KLSKSS+RAFKCPYCP EA + C+QLHF
Sbjct: 350 PCGHVVSKQSIMKLSKSSSRAFKCPYCPSEAMASHCKQLHF 390
>ref|NP_001149153.1| LOC100282775 [Zea mays] gi|195625124|gb|ACG34392.1| protein
UNQ2508/PRO5996 [Zea mays]
Length = 390
Score = 75.9 bits (185), Expect = 5e-12
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGHV+SKQSI+KLSKSS+RAFKCPYCP EA + C+QLHF
Sbjct: 350 PCGHVVSKQSIMKLSKSSSRAFKCPYCPSEAMASHCKQLHF 390
>ref|NP_001057959.1| Os06g0588900 [Oryza sativa Japonica Group]
gi|50725427|dbj|BAD32899.1| membrane protein-like [Oryza
sativa Japonica Group] gi|50726574|dbj|BAD34208.1|
membrane protein-like [Oryza sativa Japonica Group]
gi|113595999|dbj|BAF19873.1| Os06g0588900 [Oryza sativa
Japonica Group] gi|125555894|gb|EAZ01500.1| hypothetical
protein OsI_23531 [Oryza sativa Indica Group]
gi|125597714|gb|EAZ37494.1| hypothetical protein
OsJ_21828 [Oryza sativa Japonica Group]
Length = 386
Score = 75.5 bits (184), Expect = 7e-12
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGHV+SKQSI+KLSKSS+R FKCPYCP EA +QC+QLHF
Sbjct: 346 PCGHVVSKQSIMKLSKSSSRPFKCPYCPSEAVASQCKQLHF 386
>ref|XP_002963720.1| hypothetical protein SELMODRAFT_79692 [Selaginella moellendorffii]
gi|302786066|ref|XP_002974804.1| hypothetical protein
SELMODRAFT_101739 [Selaginella moellendorffii]
gi|300157699|gb|EFJ24324.1| hypothetical protein
SELMODRAFT_101739 [Selaginella moellendorffii]
gi|300168988|gb|EFJ35591.1| hypothetical protein
SELMODRAFT_79692 [Selaginella moellendorffii]
Length = 380
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGHVL KQSIVKL+K +TR FKCPYCP+EAS + CRQ+HF
Sbjct: 340 PCGHVLCKQSIVKLAKGNTRPFKCPYCPMEASSSHCRQIHF 380
>gb|ESW20314.1| hypothetical protein PHAVU_006G198800g [Phaseolus vulgaris]
gi|561021544|gb|ESW20315.1| hypothetical protein
PHAVU_006G198800g [Phaseolus vulgaris]
Length = 385
Score = 73.9 bits (180), Expect = 2e-11
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PC HVL KQSI+KLSK+STR FKCPYCP EA+V+ CRQLHF
Sbjct: 345 PCLHVLCKQSIMKLSKNSTRTFKCPYCPAEATVSHCRQLHF 385
>gb|EMT13953.1| hypothetical protein F775_28533 [Aegilops tauschii]
Length = 618
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGH +SKQSI+KLSKSS+R FKCPYCP EA +QC+QLHF
Sbjct: 578 PCGHAVSKQSIMKLSKSSSRPFKCPYCPSEAVASQCKQLHF 618
>gb|EMS46645.1| Protein RMD5-like protein A [Triticum urartu]
Length = 386
Score = 73.9 bits (180), Expect = 2e-11
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGH +SKQSI+KLSKSS+R FKCPYCP EA +QC+QLHF
Sbjct: 346 PCGHAVSKQSIMKLSKSSSRPFKCPYCPSEAVASQCKQLHF 386
>ref|XP_002313209.1| hypothetical protein POPTR_0009s08400g [Populus trichocarpa]
gi|118480973|gb|ABK92440.1| unknown [Populus
trichocarpa] gi|222849617|gb|EEE87164.1| hypothetical
protein POPTR_0009s08400g [Populus trichocarpa]
Length = 384
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PC HVL KQSI+KLSK S+RAFKCPYCP EAS AQCRQL+F
Sbjct: 344 PCLHVLCKQSIMKLSKGSSRAFKCPYCPAEASAAQCRQLYF 384
>ref|XP_004966010.1| PREDICTED: protein RMD5 homolog A-like [Setaria italica]
Length = 390
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGHV+SKQSI+KLSKSS+R FKCPYCP EA + C+QLHF
Sbjct: 350 PCGHVVSKQSIMKLSKSSSRPFKCPYCPSEAVASHCKQLHF 390
>gb|EOX97310.1| LisH/CRA/RING-U-box domains-containing protein isoform 1 [Theobroma
cacao] gi|508705415|gb|EOX97311.1| LisH/CRA/RING-U-box
domains-containing protein isoform 1 [Theobroma cacao]
Length = 385
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PC HVL KQSI+KLSKSS+R FKCPYCP EAS AQCRQL+F
Sbjct: 345 PCLHVLCKQSIMKLSKSSSRIFKCPYCPTEASAAQCRQLYF 385
>ref|XP_004485638.1| PREDICTED: protein RMD5 homolog A-like isoform X2 [Cicer arietinum]
Length = 385
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PC HVL KQSI+KLSK+STR FKCPYCP EA+VA CRQL+F
Sbjct: 345 PCLHVLCKQSIIKLSKNSTRTFKCPYCPAEATVAHCRQLYF 385
>ref|XP_004485637.1| PREDICTED: protein RMD5 homolog A-like isoform X1 [Cicer arietinum]
Length = 401
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PC HVL KQSI+KLSK+STR FKCPYCP EA+VA CRQL+F
Sbjct: 361 PCLHVLCKQSIIKLSKNSTRTFKCPYCPAEATVAHCRQLYF 401
>dbj|BAK03019.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGH +SKQSI KLSKSS+R FKCPYCP EA +QC+QLHF
Sbjct: 346 PCGHAVSKQSITKLSKSSSRPFKCPYCPSEAVASQCKQLHF 386
>ref|XP_002454438.1| hypothetical protein SORBIDRAFT_04g030940 [Sorghum bicolor]
gi|241934269|gb|EES07414.1| hypothetical protein
SORBIDRAFT_04g030940 [Sorghum bicolor]
Length = 390
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = -1
Query: 416 PCGHVLSKQSIVKLSKSSTRAFKCPYCPLEASVAQCRQLHF 294
PCGHV+SKQSI+KLSKSS+R FKCPYCP EA + C+QLHF
Sbjct: 350 PCGHVVSKQSIMKLSKSSSRPFKCPYCPSEAVASHCKQLHF 390