BLASTX nr result
ID: Zingiber25_contig00007973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00007973
(343 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 66 5e-09
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 66 5e-09
ref|XP_006360638.1| PREDICTED: uncharacterized protein LOC102581... 64 2e-08
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 59 7e-07
gb|AAU90308.2| Zinc knuckle family protein [Solanum tuberosum] 59 9e-07
gb|EPS59213.1| hypothetical protein M569_15597 [Genlisea aurea] 58 1e-06
ref|XP_004250669.1| PREDICTED: uncharacterized protein LOC101268... 58 1e-06
gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum] 58 1e-06
gb|EXC21912.1| hypothetical protein L484_011077 [Morus notabilis] 58 1e-06
ref|XP_004243069.1| PREDICTED: uncharacterized protein LOC101251... 58 1e-06
ref|XP_004234721.1| PREDICTED: uncharacterized protein LOC101244... 57 2e-06
gb|AAV31186.2| Gag-pol polyprotein, putative [Solanum tuberosum] 57 3e-06
ref|XP_004514413.1| PREDICTED: uncharacterized protein LOC101492... 56 4e-06
gb|EOY21530.1| DNA/RNA polymerases superfamily protein, putative... 56 6e-06
gb|EOY21529.1| DNA/RNA polymerases superfamily protein, putative... 56 6e-06
ref|XP_004233653.1| PREDICTED: uncharacterized protein LOC101260... 56 6e-06
gb|EOY08454.1| DNA/RNA polymerases superfamily protein [Theobrom... 55 7e-06
gb|EOY08404.1| Retrotransposon-like protein [Theobroma cacao] 55 7e-06
gb|EMJ26136.1| hypothetical protein PRUPE_ppa021588mg [Prunus pe... 55 7e-06
gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus pe... 55 7e-06
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 65.9 bits (159), Expect = 5e-09
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -1
Query: 340 QKGGPEIKQTKLLP-CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
Q G +++ L P C +CGRTHPG C G+TGC+ CGQEGH K+CP
Sbjct: 367 QSSGSVAQRSSLFPACARCGRTHPGKCRDGQTGCFKCGQEGHFVKECP 414
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 65.9 bits (159), Expect = 5e-09
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = -1
Query: 340 QKGGPEIKQTKLLP-CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
Q G +++ L P C +CGRTHPG C G+TGC+ CGQEGH K+CP
Sbjct: 361 QSSGSVAQRSSLFPACARCGRTHPGKCRDGQTGCFKCGQEGHFVKECP 408
>ref|XP_006360638.1| PREDICTED: uncharacterized protein LOC102581016 [Solanum tuberosum]
Length = 466
Score = 63.9 bits (154), Expect = 2e-08
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = -1
Query: 340 QKGGPEIKQTKLLP-CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
Q G + L P C +CGRTHPG C G+TGC+ CGQEGH K+CP
Sbjct: 242 QSSGSVAHRGSLFPTCARCGRTHPGKCRDGQTGCFKCGQEGHFVKECP 289
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 340 QKGGPEIKQTKLLP-CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
Q G ++ P C KCGR HPG C G+T C+ CGQEGH K+CP
Sbjct: 265 QSSGSVVRGGSSFPACAKCGRVHPGKCRQGQTCCFRCGQEGHFMKECP 312
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 340 QKGGPEIKQTKLLP-CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
Q G ++ P C KCGR HPG C G+T C+ CGQEGH K+CP
Sbjct: 1775 QSSGSVVRGGSSFPACAKCGRVHPGKCRQGQTCCFRCGQEGHFMKECP 1822
Score = 58.9 bits (141), Expect = 7e-07
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 340 QKGGPEIKQTKLLP-CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
Q G ++ P C KCGR HPG C G+T C+ CGQEGH K+CP
Sbjct: 3285 QSSGSVVRGGSSFPACAKCGRVHPGKCRQGQTCCFRCGQEGHFMKECP 3332
>gb|AAU90308.2| Zinc knuckle family protein [Solanum tuberosum]
Length = 347
Score = 58.5 bits (140), Expect = 9e-07
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -1
Query: 313 TKLLPCPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
+K C +CGRTH G C G+TGC+ CGQEGH K+CP
Sbjct: 188 SKAPACARCGRTHIGKCRDGQTGCFKCGQEGHFLKECP 225
>gb|EPS59213.1| hypothetical protein M569_15597 [Genlisea aurea]
Length = 314
Score = 58.2 bits (139), Expect = 1e-06
Identities = 33/99 (33%), Positives = 46/99 (46%)
Frame = -1
Query: 301 PCPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCPNKFKAPQPQPIQYGAKPQLHYMPATL 122
PC CGR H G C GCY+CG++ H+A++CP KP+ +
Sbjct: 54 PCKTCGRLHLGECRAASGGCYNCGEKEHIARECP---------------KPRRMTVIGGS 98
Query: 121 EGPQISQGRLEAPPVPAFDGARVFSLTKEEAASASTVVT 5
G Q ++G P ARVF+LTKE +T +T
Sbjct: 99 GGSQTNKGL----PRAERTNARVFNLTKENVNQDATAIT 133
>ref|XP_004250669.1| PREDICTED: uncharacterized protein LOC101268343 [Solanum
lycopersicum]
Length = 191
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -1
Query: 337 KGGPEIKQTKLLP-CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCPNK 194
K I TK P CPKC + HPG CL GK C+ CGQ GH + CP++
Sbjct: 133 KSEGSISGTKTNPTCPKCSKNHPGECLAGKEICFGCGQSGHRLRDCPSR 181
>gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]
Length = 1487
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = -1
Query: 340 QKGGPEIKQTKLLP-CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
Q G + L P C +CGRTHP C G+TGC+ CG+EGH K+CP
Sbjct: 309 QSSGSVAQGGSLFPACARCGRTHPVKCRDGQTGCFECGKEGHFMKECP 356
>gb|EXC21912.1| hypothetical protein L484_011077 [Morus notabilis]
Length = 122
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 343 NQKGGPEIKQTKLLP-CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQC 203
NQK P+ K +P CPKCG+TH C LG CY CG+E H AK C
Sbjct: 71 NQKSQPQKKSNTNIPLCPKCGKTHRRECRLGTNSCYRCGKECHYAKNC 118
>ref|XP_004243069.1| PREDICTED: uncharacterized protein LOC101251899 [Solanum
lycopersicum]
Length = 257
Score = 57.8 bits (138), Expect = 1e-06
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -1
Query: 298 CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCPN 197
C CGR HPG C G+TGC+ CG+EGH ++CPN
Sbjct: 219 CVTCGRIHPGKCRDGQTGCFKCGKEGHFMRECPN 252
>ref|XP_004234721.1| PREDICTED: uncharacterized protein LOC101244556 [Solanum
lycopersicum]
Length = 463
Score = 57.4 bits (137), Expect = 2e-06
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 322 IKQTKLLPC-PKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
+ TK P PKC + HPG CL+GK GC+ CGQ GH + CP
Sbjct: 136 VSGTKTYPTFPKCDKNHPGECLVGKEGCFGCGQSGHRLRHCP 177
>gb|AAV31186.2| Gag-pol polyprotein, putative [Solanum tuberosum]
Length = 401
Score = 57.0 bits (136), Expect = 3e-06
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = -1
Query: 298 CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP 200
C KCG+ HPGAC G GC+ C QEGH K+CP
Sbjct: 194 CAKCGKNHPGACRDGSNGCFKCDQEGHFMKECP 226
>ref|XP_004514413.1| PREDICTED: uncharacterized protein LOC101492066, partial [Cicer
arietinum]
Length = 449
Score = 56.2 bits (134), Expect = 4e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -1
Query: 298 CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCPNK 194
CPKCGR+HPG CL GK C+ C GHM++ CP +
Sbjct: 117 CPKCGRSHPGECLYGKNVCFWCKISGHMSQDCPQR 151
>gb|EOY21530.1| DNA/RNA polymerases superfamily protein, putative isoform 2
[Theobroma cacao]
Length = 398
Score = 55.8 bits (133), Expect = 6e-06
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = -1
Query: 307 LLPCPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCPNKFKAPQP 176
+ PCP CG+ + G CLL + CYSCGQ GH+ K CP + P
Sbjct: 350 IAPCPTCGKRYRGQCLLATSTCYSCGQVGHVRKNCPRSQHSEGP 393
>gb|EOY21529.1| DNA/RNA polymerases superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 519
Score = 55.8 bits (133), Expect = 6e-06
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = -1
Query: 307 LLPCPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCPNKFKAPQP 176
+ PCP CG+ + G CLL + CYSCGQ GH+ K CP + P
Sbjct: 471 IAPCPTCGKRYRGQCLLATSTCYSCGQVGHVRKNCPRSQHSEGP 514
>ref|XP_004233653.1| PREDICTED: uncharacterized protein LOC101260107 [Solanum
lycopersicum]
Length = 310
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -1
Query: 298 CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP-NKFKA---PQPQPIQYGA 155
C KCGRTH G C G C+ CG+ GHM + CP N+ +A QP+P GA
Sbjct: 196 CTKCGRTHLGECRQGTNACFGCGKSGHMVRDCPQNRGQAGGNAQPRPTPQGA 247
>gb|EOY08454.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1400
Score = 55.5 bits (132), Expect = 7e-06
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Frame = -1
Query: 298 CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCPNKFKAPQPQPIQYGAKPQLHYMP--AT 125
C CGR H G C L CY CGQ GH+ + CP ++P G+ P A
Sbjct: 317 CDTCGRRHSGRCFLTTKTCYGCGQPGHIRRDCPMAHQSPDS---ARGSTQPASSAPSVAV 373
Query: 124 LEGPQISQGR-----LEAPPVPAFDG---------ARVFSLTKEEAASASTVVT 5
G ++S R + P+ G ARVF+LT++EA +++ VV+
Sbjct: 374 SSGQEVSGSRGRGAGTSSQGRPSGSGHQSSIGRGQARVFALTQQEAQTSNAVVS 427
>gb|EOY08404.1| Retrotransposon-like protein [Theobroma cacao]
Length = 654
Score = 55.5 bits (132), Expect = 7e-06
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Frame = -1
Query: 298 CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCPNKFKAPQPQPIQYGAKPQLHYMP--AT 125
C CGR H G C L CY CGQ GH+ + CP ++P G+ P A
Sbjct: 220 CDTCGRRHSGRCFLTTKTCYGCGQPGHIRRDCPMAHQSPDS---ARGSTQPASSAPSVAV 276
Query: 124 LEGPQISQGR-----LEAPPVPAFDG---------ARVFSLTKEEAASASTVVT 5
G ++S R + P+ G ARVF+LT++EA +++ VV+
Sbjct: 277 SSGREVSGSRGRGAGTSSQGKPSGSGHQSSIGRGQARVFALTQQEAQTSNAVVS 330
>gb|EMJ26136.1| hypothetical protein PRUPE_ppa021588mg [Prunus persica]
Length = 392
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/98 (31%), Positives = 45/98 (45%)
Frame = -1
Query: 298 CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCPNKFKAPQPQPIQYGAKPQLHYMPATLE 119
C +CGR H G C G TGCY CGQ GH K CP + + +P T
Sbjct: 289 CARCGRYHSGPCQQGTTGCYYCGQPGHFRKDCPLFLQTRETTDAP---------IPGTSS 339
Query: 118 GPQISQGRLEAPPVPAFDGARVFSLTKEEAASASTVVT 5
+ GR A RV++++++EA ++ V+T
Sbjct: 340 QQRGRGGRSRAT-------GRVYNMSQQEAHASPDVIT 370
>gb|EMJ21917.1| hypothetical protein PRUPE_ppa022673mg [Prunus persica]
Length = 1506
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Frame = -1
Query: 298 CPKCGRTHPGACLLGKTGCYSCGQEGHMAKQCP------NKFKAPQPQPIQYGAKPQLHY 137
C +CGR H G C G TGCY CGQ GH K CP AP P Q
Sbjct: 343 CARCGRYHSGPCQQGTTGCYYCGQPGHFQKDCPLFPQTRETTDAPTPGTASSSGGAQTSV 402
Query: 136 MPATLEGPQISQGRLEAPPVPAFDGARVFSLTKEEAASASTVVT 5
+ GR A RV++++++EA ++ V+T
Sbjct: 403 ASHGSSQQRGRGGRSRAT-------GRVYNMSQQEAHASPEVIT 439