BLASTX nr result
ID: Zingiber25_contig00007901
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber25_contig00007901
(523 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEJ07938.1| ring-H2 zinc finger protein [Zea diploperennis] 75 9e-12
gb|AAV64219.1| znf [Zea mays] 71 1e-10
gb|AFW85496.1| putative RING zinc finger domain superfamily prot... 71 1e-10
gb|AEJ07933.1| ring-H2 zinc finger protein [Zea mays subsp. mexi... 71 1e-10
gb|ACA21860.1| ring-H2 zinc finger protein [Zea mays] 71 1e-10
gb|ABF67955.1| ring-H2 zinc finger protein [Zea mays] 71 1e-10
gb|ABF67937.1| ring-H2 zinc finger protein [Zea mays] gi|9986673... 71 1e-10
gb|ABF67923.1| ring-H2 zinc finger protein [Zea mays] 71 1e-10
gb|ABF67914.1| ring-H2 zinc finger protein [Zea mays] 71 1e-10
gb|AAL59234.1|AF448416_14 ring-H2 zinc finger protein [Zea mays] 71 1e-10
gb|AAM71248.1| ring-H2 zinc finger protein [Zea mays] 71 1e-10
gb|AEJ07900.1| ring-H2 zinc finger protein [Zea mays subsp. mexi... 70 3e-10
ref|XP_003564161.1| PREDICTED: RING-H2 finger protein ATL3-like ... 70 3e-10
gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi] 68 1e-09
ref|XP_002436629.1| hypothetical protein SORBIDRAFT_10g006200 [S... 67 3e-09
gb|AFW76603.1| putative RING zinc finger domain superfamily prot... 66 4e-09
gb|AEJ07954.1| ring-H2 zinc finger protein [Sorghum propinquum] 66 6e-09
>gb|AEJ07938.1| ring-H2 zinc finger protein [Zea diploperennis]
Length = 295
Score = 75.1 bits (183), Expect = 9e-12
Identities = 60/153 (39%), Positives = 72/153 (47%), Gaps = 27/153 (17%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 127 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLEFPVFPTNVLFWGTHDEVTNAGLVAP 183
Query: 347 --------------------IEIPRNAV--DVLGPQTSPLPSSR--AALEELRSPVSATF 240
I+IP AV + L P SPLP+SR + +E+RSPVSA
Sbjct: 184 PRVASAASSSASGRRKENLVIDIPTRAVATNTLPPANSPLPASRMPGSADEMRSPVSARL 243
Query: 239 RSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 244 RSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 274
>gb|AAV64219.1| znf [Zea mays]
Length = 337
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 163 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 219
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 220 PRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 279
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 280 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 312
>gb|AFW85496.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 331
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 157 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 213
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 214 PRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 273
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 274 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 306
>gb|AEJ07933.1| ring-H2 zinc finger protein [Zea mays subsp. mexicana]
Length = 302
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 130 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 186
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 187 PRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 246
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 247 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|ACA21860.1| ring-H2 zinc finger protein [Zea mays]
Length = 298
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 128 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 184
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 185 PRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 244
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 245 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 277
>gb|ABF67955.1| ring-H2 zinc finger protein [Zea mays]
Length = 300
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 130 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 186
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 187 PRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 246
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 247 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|ABF67937.1| ring-H2 zinc finger protein [Zea mays] gi|99866730|gb|ABF67943.1|
ring-H2 zinc finger protein [Zea mays]
gi|338808415|gb|AEJ07918.1| ring-H2 zinc finger protein
[Zea mays]
Length = 304
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 130 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 186
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 187 PRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 246
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 247 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|ABF67923.1| ring-H2 zinc finger protein [Zea mays]
Length = 304
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 130 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 186
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 187 PRAATSASSSASGRRKENLIIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 246
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 247 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|ABF67914.1| ring-H2 zinc finger protein [Zea mays]
Length = 302
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 130 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 186
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 187 PRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 246
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 247 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|AAL59234.1|AF448416_14 ring-H2 zinc finger protein [Zea mays]
Length = 304
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 130 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 186
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 187 PRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 246
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 247 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|AAM71248.1| ring-H2 zinc finger protein [Zea mays]
Length = 304
Score = 71.2 bits (173), Expect = 1e-10
Identities = 59/155 (38%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 130 WFHSHDTCPLCRAPV---GDLDALPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 186
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +E+RSPVSA
Sbjct: 187 PRAATSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADEMRSPVSA 246
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 247 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 279
>gb|AEJ07900.1| ring-H2 zinc finger protein [Zea mays subsp. mexicana]
Length = 300
Score = 70.1 bits (170), Expect = 3e-10
Identities = 58/155 (37%), Positives = 70/155 (45%), Gaps = 29/155 (18%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERALV-- 348
WFHSH TCPLCR+ V TNVL G D V LV
Sbjct: 128 WFHSHDTCPLCRAPV---GDLDLLPREEPSGAPLELPVFPTNVLFWGTHDEVTNAGLVAP 184
Query: 347 --------------------IEIPRNAVDVLG----PQTSPLPSSR--AALEELRSPVSA 246
I+IP AV P SPLP+SR + +++RSPVSA
Sbjct: 185 PRAAPSASSSASGRRKENLVIDIPTRAVATTTTTPPPANSPLPASRMPGSADDMRSPVSA 244
Query: 245 TFRSLRRLWSQGRKASAG-PSSFSSREVDVEQGPA 144
RSLRRL S+G++A G SS+S R D+EQG A
Sbjct: 245 RLRSLRRLLSRGKQAMVGTSSSYSPR--DIEQGLA 277
>ref|XP_003564161.1| PREDICTED: RING-H2 finger protein ATL3-like [Brachypodium
distachyon]
Length = 316
Score = 70.1 bits (170), Expect = 3e-10
Identities = 58/160 (36%), Positives = 68/160 (42%), Gaps = 36/160 (22%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAV-------VXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVN 363
WFHSH TCPLCR+ V TNVL G D V
Sbjct: 137 WFHSHDTCPLCRAPVGSDAGAGELVAAESLPRVPREDPAVVEFPMFPTNVLFWGTHDDVA 196
Query: 362 ERA--------------------------LVIEIPRNAVDVLGPQTSPLPSSR---AALE 270
LVI+IP V V G +SPLP+SR A +
Sbjct: 197 NTGHGFPAAPPPIAAASTSSSGSARRMENLVIDIPPRPVAV-GASSSPLPASRMPGTAAD 255
Query: 269 ELRSPVSATFRSLRRLWSQGRKASAGPSSFSSREVDVEQG 150
+LRSP+SA RSLRRL S+G+ A G S+ S R DVEQG
Sbjct: 256 DLRSPLSARLRSLRRLLSRGKHAVVGTSNSSPRGGDVEQG 295
>gb|AFV13468.1| ring-H2 zinc finger protein [Coix lacryma-jobi]
Length = 308
Score = 68.2 bits (165), Expect = 1e-09
Identities = 59/162 (36%), Positives = 71/162 (43%), Gaps = 36/162 (22%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAV-VXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVNERAL-- 351
WFHSH TCPLCR+ V TNVL G D V L
Sbjct: 133 WFHSHDTCPLCRAPVGAGAGDLDALPREDPSAASLEFPVFPTNVLFWGTHDEVTNAGLAT 192
Query: 350 --------------------------VIEIPRNAVDV-LGPQTSPLPSSR----AALEEL 264
VI+IP V + P SPLP+SR AA +E+
Sbjct: 193 PPLQPPVATAASAASSSASGRRKENLVIDIPTRPVALNTPPMNSPLPASRMPGSAAADEM 252
Query: 263 RSPVSATFRSLRRLWSQGRKASAGPSSFSSR--EVDVEQGPA 144
RSPVSA RSLRRL S+G++A G +S+S R D+EQG A
Sbjct: 253 RSPVSARLRSLRRLLSRGKQAVVG-TSYSPRAGAGDIEQGLA 293
>ref|XP_002436629.1| hypothetical protein SORBIDRAFT_10g006200 [Sorghum bicolor]
gi|241914852|gb|EER87996.1| hypothetical protein
SORBIDRAFT_10g006200 [Sorghum bicolor]
Length = 357
Score = 66.6 bits (161), Expect = 3e-09
Identities = 57/168 (33%), Positives = 69/168 (41%), Gaps = 42/168 (25%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAV--VXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVN----- 363
WFHSH TCPLCR+ V TNVL G D V
Sbjct: 171 WFHSHDTCPLCRAPVGGAGAGELDALPREEPSGASLEFPVFPTNVLFWGTNDEVTNAGLA 230
Query: 362 ---------------------------ERALVIEIPRNAVDV-LGPQTSPLPSSR--AAL 273
E LVI+IP V + P SPLP+SR
Sbjct: 231 TPPPPPPHPIASAAASASSSASSGRRKENQLVIDIPTRPVALNTPPMNSPLPASRMPGTA 290
Query: 272 EELRSPVSATFRSLRRLWSQGRKASAGPSSFS-----SREVDVEQGPA 144
+++RSPVSA RSLRRL S+G++A G SS+S D+EQG A
Sbjct: 291 DDMRSPVSARLRSLRRLLSRGKQAVVGTSSYSPSPRGGAGGDIEQGIA 338
>gb|AFW76603.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 331
Score = 66.2 bits (160), Expect = 4e-09
Identities = 56/158 (35%), Positives = 66/158 (41%), Gaps = 32/158 (20%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAVVXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPV-------- 366
WFHSH TCPLCR+ V TNVL G D V
Sbjct: 164 WFHSHDTCPLCRAPV-----GGDLDALPREEPFGASLEFPTNVLFWGTHDEVANAGLATP 218
Query: 365 --------------------NERALVIEIPRN--AVDVLGPQTSPLPSSRA--ALEELRS 258
+ LVI+IP A+ P SPLP+SR + +E RS
Sbjct: 219 PPPPPPVASAVSASSSASGRRKENLVIDIPTRPVALTTTPPFNSPLPASRVPGSADETRS 278
Query: 257 PVSATFRSLRRLWSQGRKASAGPSSFSSREVDVEQGPA 144
PVSA RSLRRL S+G++A G S DVEQG A
Sbjct: 279 PVSARLRSLRRLLSRGKQAVVGTSYSPRGAGDVEQGLA 316
>gb|AEJ07954.1| ring-H2 zinc finger protein [Sorghum propinquum]
Length = 326
Score = 65.9 bits (159), Expect = 6e-09
Identities = 57/170 (33%), Positives = 69/170 (40%), Gaps = 44/170 (25%)
Frame = -3
Query: 521 WFHSHSTCPLCRSAV--VXXXXXXXXXXXXXXXXXXXXXXXXTNVLIRGGRDPVN----- 363
WFHSH TCPLCR+ V TNVL G D V
Sbjct: 138 WFHSHDTCPLCRAPVGGAGAGELDALPREEPSGASLEFPVFPTNVLFWGTNDEVTNAGLA 197
Query: 362 -----------------------------ERALVIEIPRNAVDV-LGPQTSPLPSSR--A 279
E LVI+IP V + P SPLP+SR
Sbjct: 198 TPPPPPPHPIASASAAASASSSASSGRRKENQLVIDIPTRPVALNTPPMNSPLPASRMPG 257
Query: 278 ALEELRSPVSATFRSLRRLWSQGRKASAGPSSFS-----SREVDVEQGPA 144
+++RSPVSA RSLRRL S+G++A G SS+S D+EQG A
Sbjct: 258 TADDMRSPVSARLRSLRRLLSRGKQAVVGTSSYSPSPRGGAGGDIEQGIA 307