BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber25_contig00007900
         (3462 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...  1344   0.0  
gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]       1331   0.0  
gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]       1330   0.0  
ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [A...  1297   0.0  
emb|CBI24922.3| unnamed protein product [Vitis vinifera]             1288   0.0  
gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]          1273   0.0  
ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2-like [Oryza b...  1264   0.0  
ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum...  1260   0.0  
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...  1257   0.0  
ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus ...  1256   0.0  
ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citr...  1256   0.0  
ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum...  1255   0.0  
ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citr...  1252   0.0  
dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japo...  1246   0.0  
ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragari...  1246   0.0  
ref|XP_002314046.2| DNA topoisomerase family protein [Populus tr...  1243   0.0  
gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus pe...  1237   0.0  
ref|XP_002298421.2| DNA topoisomerase family protein [Populus tr...  1236   0.0  
ref|XP_004953539.1| PREDICTED: DNA topoisomerase 2-like [Setaria...  1210   0.0  
ref|XP_002452699.1| hypothetical protein SORBIDRAFT_04g030880 [S...  1207   0.0  

>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score = 1344 bits (3479), Expect = 0.0
 Identities = 704/1127 (62%), Positives = 827/1127 (73%), Gaps = 63/1127 (5%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AH VK+HLWVFVNALIDNPAFDSQTKETLT RQ S GSKCELSQ+FLKKV+KSGVV +LL
Sbjct: 349  AHTVKNHLWVFVNALIDNPAFDSQTKETLTIRQSSFGSKCELSQEFLKKVSKSGVVESLL 408

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WAD+KQ+K+LKKTDG KRQR+TGI KLEDANDAGGRNS+KCTLILTEGDSAKALAM+GI
Sbjct: 409  SWADYKQNKDLKKTDGTKRQRLTGITKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGI 468

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            SVVGRN+YGVFPLRGKLLNVR+A  KQI++NAEIQNIKQILGLQ GKEYDS K LRYGHL
Sbjct: 469  SVVGRNHYGVFPLRGKLLNVRDAQKKQILENAEIQNIKQILGLQQGKEYDSIKSLRYGHL 528

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMP 720
            MIMTDQDHDGSHIKGLLINFIH+FWPSLLK+PSF+VEFITP++KAT+ R   VLSFYSMP
Sbjct: 529  MIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATH-RNGRVLSFYSMP 587

Query: 721  EFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELA 900
            E+E+WKESLGGN++GWSIKYYKGLGTS S+EGKEYF+++G HKK+F+W+D +DG++IELA
Sbjct: 588  EYESWKESLGGNASGWSIKYYKGLGTSTSKEGKEYFKDLGKHKKDFMWVDEKDGDAIELA 647

Query: 901  FSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKP 1080
            FSKKKIE RKNWLRQF+P  YLDQ E LIKYSDF+NKELILFS ADLQRSIPSMVDGLKP
Sbjct: 648  FSKKKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKP 707

Query: 1081 GQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLL 1260
            GQRKILFC+FKRNF+K+AK+AQF GYVSE+SAYHHGEQSLA+TII MAQDFVGSNNINLL
Sbjct: 708  GQRKILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLL 767

Query: 1261 QPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPI 1440
             P GQFGTRHQGGKDHASARYI+T L+PITRFLFPKDDDILLDYLNEDGQSIEP+WY+P 
Sbjct: 768  LPNGQFGTRHQGGKDHASARYIYTRLSPITRFLFPKDDDILLDYLNEDGQSIEPTWYVPT 827

Query: 1441 IPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKS-A 1617
            IP+VLVNGSEGIGTGWSS IPNYNP+DI+ANV+RLLN E M+PMDPWYRGF+G IEK+  
Sbjct: 828  IPMVLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRGFRGTIEKTDP 887

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYRE 1797
            TK+  + YT+ G+IEE++ TTLR++ELPVR+WTQDYKEFLES MTGNDKIK+PFIKDY+E
Sbjct: 888  TKQESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKDYKE 947

Query: 1798 HNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQIL 1977
            HNDD TVHFEV ++EEN+ +A+QEGL +KFKLTT IST+NMHLFDS   IKKY++PEQIL
Sbjct: 948  HNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPEQIL 1007

Query: 1978 EEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQ 2157
            EEFF LR  +YEKR                   RFILGVVR EI+V+ RKRADLF EL Q
Sbjct: 1008 EEFFHLRLEFYEKRKRVLLDNLELELLKLENKVRFILGVVRGEIIVSNRKRADLFHELHQ 1067

Query: 2158 KGFTPFPKKTKGIDAAVAGASEEDGEQEESPQP-GKGGALASDYDYLMSMRIDSLTEEKV 2334
            KGFTPFPKK+K ++ AVAGA+++  E EE+     KGG  A+DY+YL+SM I +LT EKV
Sbjct: 1068 KGFTPFPKKSKSVEIAVAGATDDTEEAEENTDAVSKGGVRATDYEYLLSMAIGTLTLEKV 1127

Query: 2335 QELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEM--RMNH 2508
            QELCA ++KL   VD+L++ +P+                       AE  RK++  R+  
Sbjct: 1128 QELCADRDKLNKGVDDLKKATPKALWITDLDALERELDEQDKNDARAEETRKQLKSRVMS 1187

Query: 2509 IAGVAPSKQGAKKPRKNT--ANKLSVSATTTD---------------------AGGQXXX 2619
             AG+  S+Q  K PRKN   AN    +A T D                     A  +   
Sbjct: 1188 EAGMKVSRQAPKNPRKNNKKANNAEPAAETMDVSASSAMEMESVPEVVKPKGRAAPRKAP 1247

Query: 2620 XXXXXXXQTVEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPSRNA 2799
                    +V + ++D+E+  LK+RLAAYNL+SSPD  A     V       KK+PSR A
Sbjct: 1248 AKKKEMPTSVLKDEDDDEVHELKERLAAYNLESSPDGSAAMEAEVPQVPAARKKEPSRRA 1307

Query: 2800 AAKKA-----TYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAK-- 2958
            AA+K      T +   DEDDE  + + +  +                   KP    AK  
Sbjct: 1308 AAQKKPLASFTEISDDDEDDEDFEVEEVSASDVKKKGGRKPAANAKAAAAKPAAAAAKNK 1367

Query: 2959 --ATRKRGPAQASKATTT-------------SQKVRKMRASPFNKKSGSVLSKPRNED-- 3087
              A  K+ P    +   T              +KVRKMRASPFNKKSGSVL     ED  
Sbjct: 1368 RGAANKQQPQLLGQTLLTEIFKPAETLGISPEKKVRKMRASPFNKKSGSVLGSTGEEDET 1427

Query: 3088 ------------XXXXXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
                                       RTRP+RE+R +   YV SDS
Sbjct: 1428 AETEENSGSASTSNSSGGESNEVVMPARTRPQRENRVQTR-YVVSDS 1473


>gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]
          Length = 1285

 Score = 1331 bits (3444), Expect = 0.0
 Identities = 711/1122 (63%), Positives = 823/1122 (73%), Gaps = 58/1122 (5%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AHNVK+HLWVFVNALIDNPAFDSQTKETLT RQ S GSKCELS+DFLKKVAK GVV+ LL
Sbjct: 157  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVAKCGVVDNLL 216

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WA+FK SK+LKKTDGAK   I GIPKL+DAN+AGGRNSDKCTLILTEGDSAKALA++G+
Sbjct: 217  SWAEFKHSKDLKKTDGAKTGSIRGIPKLDDANEAGGRNSDKCTLILTEGDSAKALAVAGL 276

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            +VVGRN+YGVFPLRGKLLNVREA+HKQ+MDNAEIQN+K+ILGLQ GKEY + K LRYGHL
Sbjct: 277  AVVGRNHYGVFPLRGKLLNVREASHKQLMDNAEIQNLKRILGLQQGKEYSNVKSLRYGHL 336

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMP 720
            MIMTDQDHDGSHIKGLLINFIH+FWPSLLKVPSFMVEFITP++KAT+ +TK VLSFYSMP
Sbjct: 337  MIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFMVEFITPIVKATH-KTKGVLSFYSMP 395

Query: 721  EFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELA 900
            E+E WKESLGGN+ GWSIKYYKGLGTS S+EGK+YF+N+  H+KEFVW D QDGE+IELA
Sbjct: 396  EYEFWKESLGGNAKGWSIKYYKGLGTSTSKEGKDYFKNLDKHRKEFVWQDEQDGEAIELA 455

Query: 901  FSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKP 1080
            FSKKKIEARKNWLRQFEP  +LDQS+ LIKYS+FINKELILFS ADLQRSIPSM+DGLKP
Sbjct: 456  FSKKKIEARKNWLRQFEPGTHLDQSQKLIKYSEFINKELILFSMADLQRSIPSMIDGLKP 515

Query: 1081 GQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLL 1260
            GQRKILFC+FKRNFVK+AKVAQF GYVSE+SAYHHGEQSLA+TI+ MAQDFVGSNNINLL
Sbjct: 516  GQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIVGMAQDFVGSNNINLL 575

Query: 1261 QPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPI 1440
             P GQFGTR+QGGKD ASARYIFT L+PITR+LFPKDDD LLDYLNEDGQSIEP WY+PI
Sbjct: 576  NPGGQFGTRNQGGKDAASARYIFTNLSPITRYLFPKDDDGLLDYLNEDGQSIEPIWYVPI 635

Query: 1441 IPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSAT 1620
            IP+VLVNGSEGIGTGWSSYIPNYNP+DIVANV+RLLN E M+PM PWYRGFKG IEK+A+
Sbjct: 636  IPMVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTAS 695

Query: 1621 KEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYREH 1800
            KE G+TYTITG+IEE+D TTLR+TELPVRRWTQDY+EFLES +TGND    PFIK++R++
Sbjct: 696  KEAGVTYTITGIIEEVDETTLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQY 751

Query: 1801 NDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQILE 1980
            +DD TV FEV +TEENM +A+QEGL KKFKLTTTIST+NMHLFDSK +IKKYD+PEQILE
Sbjct: 752  SDDTTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILE 811

Query: 1981 EFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQK 2160
            EFF LRF +YEKR                   RFILGVV+ EI+VN RKRADLFLELQ K
Sbjct: 812  EFFHLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTK 871

Query: 2161 GFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQE 2340
            GFTPFPKK K ++ AVAGA+++  E EE+ +    G  ASDYDYL+SM I SLT EKVQE
Sbjct: 872  GFTPFPKKAKTVEVAVAGATDDTEETEENSEVSAKGLQASDYDYLLSMAIGSLTLEKVQE 931

Query: 2341 LCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIAGV 2520
            LCA ++KL+ EV++LR+ +P++                      AE A K ++    AG 
Sbjct: 932  LCADRDKLQQEVEDLRKATPKS-LWLKDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGK 990

Query: 2521 APSKQGAKKPRK-NTANKLSVSAT-TTDAGGQXXXXXXXXXXQTV--------------- 2649
               +Q  K PRK N   K + + T TTD                V               
Sbjct: 991  RAQRQAPKIPRKINKKEKNAETVTETTDISSSSAMETAETAPAAVKPKGRGGSRKAKKDD 1050

Query: 2650 --EESDEDEEILALKDRLAAYNLDSSPD-NGAMETDTVVSDQGKAKKQPSRNAAA--KKA 2814
              ++ DED  I  L++RLA YNLDSSPD + AMET+  V      KK+PS+ AAA  KK 
Sbjct: 1051 SDDDDDEDFGIPDLRERLAKYNLDSSPDHSAAMETE--VPQVPAGKKEPSKRAAAARKKP 1108

Query: 2815 TYVLSS-----DEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAKATRKRGP 2979
               LS       E D  ++   ++                     K   +   A +KRGP
Sbjct: 1109 ATSLSEISESIGEIDINDEDLEVVEVAAAAAPAGKKGGRKPAANSKAAAKPPAAAKKRGP 1168

Query: 2980 AQASKAT------------------TTSQKVRKMRASPFNKKSGSVLSKPRNE------- 3084
            A A K +                  +  +KVRKMRASPFNKKSGSVL +   E       
Sbjct: 1169 AAAGKKSQQQKLLTEMLKPAEDSGISPEKKVRKMRASPFNKKSGSVLGRVGKELESTTDS 1228

Query: 3085 ------DXXXXXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
                                  R RP+R +R K   YV SDS
Sbjct: 1229 EETFGSSSMSADTEEVTEIVPARPRPQRTNR-KQTTYVLSDS 1269


>gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]
          Length = 1473

 Score = 1330 bits (3442), Expect = 0.0
 Identities = 708/1121 (63%), Positives = 823/1121 (73%), Gaps = 57/1121 (5%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AHNVK+HLWVFVNALIDNPAFDSQTKETLT RQ S GSKCELS+DFLKKVAK GVV+ LL
Sbjct: 346  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVAKCGVVDNLL 405

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WA+FK SK+LKKTDGAK   I GIPKL+DAN+AGGRNSDKCTLILTEGDSAKALA++G+
Sbjct: 406  SWAEFKHSKDLKKTDGAKTGSIRGIPKLDDANEAGGRNSDKCTLILTEGDSAKALAVAGL 465

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            +VVGRN+YGVFPLRGKLLNVREA+HKQ+MDNAEIQN+K+ILGLQ GKEY + K LRYGHL
Sbjct: 466  AVVGRNHYGVFPLRGKLLNVREASHKQLMDNAEIQNLKRILGLQQGKEYSNVKSLRYGHL 525

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMP 720
            MIMTDQDHDGSHIKGLLINFIH+FWPSLLKVPSFMVEFITP++KAT+ +TK VLSFYSMP
Sbjct: 526  MIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFMVEFITPIVKATH-KTKGVLSFYSMP 584

Query: 721  EFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELA 900
            E+E WKESLGGN+ GWSIKYYKGLGTS S+EGK+YF+N+  H+KEFVW D QDGE+IELA
Sbjct: 585  EYEFWKESLGGNAKGWSIKYYKGLGTSTSKEGKDYFKNLDKHRKEFVWQDEQDGEAIELA 644

Query: 901  FSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKP 1080
            FSKKKIEARKNWLRQFEP  +LDQS+ LIKYS+FINKELILFS ADLQRSIPSM+DGLKP
Sbjct: 645  FSKKKIEARKNWLRQFEPGTHLDQSQKLIKYSEFINKELILFSMADLQRSIPSMIDGLKP 704

Query: 1081 GQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLL 1260
            GQRKILFC+FKRNFVK+AKVAQF GYVSE+SAYHHGEQSLA+TI+ MAQDFVGSNNINLL
Sbjct: 705  GQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIVGMAQDFVGSNNINLL 764

Query: 1261 QPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPI 1440
             P GQFGTR+QGGKD ASARYIFT L+PITR+LFPKDDD LLDYLNEDGQSIEP WY+PI
Sbjct: 765  NPGGQFGTRNQGGKDAASARYIFTNLSPITRYLFPKDDDGLLDYLNEDGQSIEPIWYVPI 824

Query: 1441 IPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSAT 1620
            IP+VLVNGSEGIGTGWSSYIPNYNP+DIVANV+RLLN E M+PM PWYRGFKG IEK+A+
Sbjct: 825  IPMVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTAS 884

Query: 1621 KEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYREH 1800
            KE G+TYTITG+IEE+D TTLR+TELPVRRWTQDY+EFLES +TGND    PFIK++R++
Sbjct: 885  KEAGVTYTITGIIEEVDETTLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQY 940

Query: 1801 NDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQILE 1980
            +DD TV FEV +TEENM +A+QEGL KKFKLTTTIST+NMHLFDSK +IKKYD+PEQILE
Sbjct: 941  SDDTTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILE 1000

Query: 1981 EFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQK 2160
            EFF LRF +YEKR                   RFILGVV+ EI+VN RKRADLFLELQ K
Sbjct: 1001 EFFHLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTK 1060

Query: 2161 GFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQE 2340
            GFTPFPKK K ++ AVAGA+++  E EE+ +    G  ASDYDYL+SM I SLT EKVQE
Sbjct: 1061 GFTPFPKKAKTVEVAVAGATDDTEETEENSEVSAKGLQASDYDYLLSMAIGSLTLEKVQE 1120

Query: 2341 LCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIAGV 2520
            LCA ++KL+ EV++LR+ +P++                      AE A K ++    AG 
Sbjct: 1121 LCADRDKLQQEVEDLRKATPKS-LWLKDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGK 1179

Query: 2521 APSKQGAKKPRK------------NTANKLSVSATTTDAGGQXXXXXXXXXXQTVEESDE 2664
               +Q  K PRK             T +  S SA  T+              +  ++ D 
Sbjct: 1180 RAQRQAPKIPRKINKKEKNAETVTETTDISSSSAMETETAPAAVKPKGRGGSRKAKKDDS 1239

Query: 2665 DEE------ILALKDRLAAYNLDSSPD-NGAMETDTVVSDQGKAKKQPSRNAAA--KKAT 2817
            D++      I  L++RLA YNLDSSPD + AMET+  V      KK+PS+ AAA  KK  
Sbjct: 1240 DDDDDEDFGIPDLRERLAKYNLDSSPDHSAAMETE--VPQVPAGKKEPSKRAAAARKKPA 1297

Query: 2818 YVLSS-----DEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAKATRKRGPA 2982
              LS       E D  ++   ++                     K   +   A +KRGPA
Sbjct: 1298 TSLSEISESIGEIDINDEDLEVVEVAAAAAPAGKKGGRKPAANSKAAAKPPAAAKKRGPA 1357

Query: 2983 QASKAT------------------TTSQKVRKMRASPFNKKSGSVLSKPRNE-------- 3084
             A K +                  +  +KVRKMRASPFNKKSGSVL +   E        
Sbjct: 1358 AAGKKSQQQKLLTEMLKPAEDSGISPEKKVRKMRASPFNKKSGSVLGRVGKELESTTDSE 1417

Query: 3085 -----DXXXXXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
                                 R RP+R +R K   YV SDS
Sbjct: 1418 ETFGSSSMSADTEEVTEIVPARPRPQRTNR-KQTTYVLSDS 1457


>ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [Amborella trichopoda]
            gi|548840751|gb|ERN00852.1| hypothetical protein
            AMTR_s00103p00101630 [Amborella trichopoda]
          Length = 1505

 Score = 1297 bits (3357), Expect = 0.0
 Identities = 680/1103 (61%), Positives = 792/1103 (71%), Gaps = 75/1103 (6%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AH V++HLWVFVNALIDNPAFDSQTKETLTTRQGS GSKCELS++FLKK A SG+V +LL
Sbjct: 358  AHTVRNHLWVFVNALIDNPAFDSQTKETLTTRQGSFGSKCELSEEFLKKAANSGIVESLL 417

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WADFKQSK+LKKTDG K QRITG+PKLEDAN AGGRNS+KCTLILTEGDSAKALAM+GI
Sbjct: 418  SWADFKQSKDLKKTDGTKCQRITGLPKLEDANQAGGRNSEKCTLILTEGDSAKALAMAGI 477

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            SVVGR+++GVFPLRGKLLNVREA   QI DN EIQNIKQILGLQHGK YDS K LRYGHL
Sbjct: 478  SVVGRDHFGVFPLRGKLLNVREATKTQIKDNKEIQNIKQILGLQHGKVYDSVKSLRYGHL 537

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMP 720
            MIMTDQDHDGSHIKGLLINFIH+FWPSLLKVPSF+VEFITP++KA N   K VLSFY++P
Sbjct: 538  MIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITPIVKARNKNGK-VLSFYTLP 596

Query: 721  EFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELA 900
            E+E+WKESLGGN+ GW+IKYYKGLGTS S+EGKEYF+ I  HKK+F+W+D QDG++IELA
Sbjct: 597  EYESWKESLGGNARGWTIKYYKGLGTSTSQEGKEYFKEINKHKKDFIWVDDQDGDAIELA 656

Query: 901  FSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKP 1080
            FSKKKIEARKNWLR FEP  YLDQ E LIKYSDF+NKELILFS ADLQRSIPSMVDGLKP
Sbjct: 657  FSKKKIEARKNWLRHFEPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKP 716

Query: 1081 GQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLL 1260
            GQRKILFC+FKRNFV QAKV QF GYVSE+SAYHHGEQSLA TI+ MAQDFVG+NNINLL
Sbjct: 717  GQRKILFCSFKRNFVSQAKVVQFSGYVSEHSAYHHGEQSLAATIVGMAQDFVGTNNINLL 776

Query: 1261 QPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPI 1440
            QP GQFGTR++GGKD ASARYIFTCL+PITRFLFPKDDD+LLDY NEDGQ IEP+WYMPI
Sbjct: 777  QPLGQFGTRNRGGKDAASARYIFTCLSPITRFLFPKDDDVLLDYQNEDGQCIEPNWYMPI 836

Query: 1441 IPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSAT 1620
            IPLVL+NGSEGIGTGWSSY+PNYNP+D+ ANVKRLLN E M PM+PWY+GFKG IEKSAT
Sbjct: 837  IPLVLINGSEGIGTGWSSYVPNYNPRDVAANVKRLLNGESMLPMEPWYKGFKGTIEKSAT 896

Query: 1621 KEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYREH 1800
            KEGG+ YT++G++EEI+ TTLR+TELP+RRWT+DYK +LES  TG++K KEPFI DY+EH
Sbjct: 897  KEGGVGYTVSGIVEEINETTLRITELPIRRWTEDYKVYLESLRTGSEKTKEPFIVDYKEH 956

Query: 1801 NDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQILE 1980
            N D  VHF+V + EENM I++QEGL K FKLTTTIST+NMHLF++K VIKKYD+PEQILE
Sbjct: 957  NTDTRVHFDVLLPEENMKISQQEGLMKMFKLTTTISTSNMHLFNAKGVIKKYDTPEQILE 1016

Query: 1981 EFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQK 2160
            EFF LR  YY KR                   RFILGVV  EIVV+KRKRADL LEL+ K
Sbjct: 1017 EFFHLRLDYYGKRKKVLLDNLELELLKLDNKARFILGVVNGEIVVSKRKRADLVLELRDK 1076

Query: 2161 GFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQE 2340
            GFTPFPKK+K ++AA+AGA+  D E EESP+    G  ASDYDYL+SM I +LT EKVQE
Sbjct: 1077 GFTPFPKKSKNVEAALAGATPVDEEGEESPEVDDRGINASDYDYLLSMAIGTLTIEKVQE 1136

Query: 2341 LCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIAGV 2520
            LCA+K+KLE +V ELR  +P+                        E    E  +N++   
Sbjct: 1137 LCAEKDKLEHDVKELRGLTPKA----LWIKDLDAFLAQLDAEAVQEAKDDEYELNNMVSD 1192

Query: 2521 APS--KQGAKKPRKNTANKLSVSATTTDAGGQXXXXXXXXXXQTVE-----------ESD 2661
            A    +Q  K PRKNT          TDA             +              E  
Sbjct: 1193 AAKIFRQVGKNPRKNTKKPAPAEHVDTDASDTTTTEVAAKPKKRAPKKAPTKKKVDVEDM 1252

Query: 2662 EDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPSRNAAAK-KATYVLSSD- 2835
            ED+ +L L  RLA YN++SSP++  METD         +++PS+ A +K +  Y   SD 
Sbjct: 1253 EDDLLLDLNARLAKYNIESSPEHADMETDL------PERREPSKRAVSKPQQVYADISDD 1306

Query: 2836 --------EDDEPEQQQRLMPT--------------------------IXXXXXXXXXXX 2913
                    E+++ E+Q+   P                           +           
Sbjct: 1307 ESEHLEEIEEEKEEEQEDEDPKPAKGKKKQAPKPKEKKKMDGSSDEEFVISDEDLSVFDI 1366

Query: 2914 XXXXXGRKPKNETAK-----------ATRKRGPAQASK---------------ATTTSQK 3015
                   KPK    K           A +KRG A + +                 +  +K
Sbjct: 1367 ETEDAPPKPKGRAKKPLSNKPKAPTGAAKKRGAASSKQPILNQKLITEVLKPVGVSPEKK 1426

Query: 3016 VRKMRASPFNKKSGSVLSKPRNE 3084
            VRKMRASPFNKKSGSVL +   E
Sbjct: 1427 VRKMRASPFNKKSGSVLGRIERE 1449


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 1288 bits (3333), Expect = 0.0
 Identities = 684/1126 (60%), Positives = 800/1126 (71%), Gaps = 62/1126 (5%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AH VK+HLWVFVNALIDNPAFDSQTKETLT RQ S GSKCELSQ+FLKKV+KSGVV +LL
Sbjct: 349  AHTVKNHLWVFVNALIDNPAFDSQTKETLTIRQSSFGSKCELSQEFLKKVSKSGVVESLL 408

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WAD+KQ+K+LKKTDG KRQR+TGI KLEDANDAGGRNS+KCTLILTEGDSAKALAM+GI
Sbjct: 409  SWADYKQNKDLKKTDGTKRQRLTGITKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGI 468

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            SVVGRN+YGVFPLRGKLLNVR+A  KQI++NAEIQNIKQILGLQ GKEYDS K LRYGHL
Sbjct: 469  SVVGRNHYGVFPLRGKLLNVRDAQKKQILENAEIQNIKQILGLQQGKEYDSIKSLRYGHL 528

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMP 720
            MIMTDQDHDGSHIKGLLINFIH+FWPSLLK+PSF+VEFITP++KAT+ R   VLSFYSMP
Sbjct: 529  MIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATH-RNGRVLSFYSMP 587

Query: 721  EFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELA 900
            E+E+WKESLGGN++GWSIKYYKGLGTS S+EGKEYF+++G HKK+F+W+D +DG++IELA
Sbjct: 588  EYESWKESLGGNASGWSIKYYKGLGTSTSKEGKEYFKDLGKHKKDFMWVDEKDGDAIELA 647

Query: 901  FSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKP 1080
            FSKKKIE RKNWLRQF+P  YLDQ E LIKYSDF+NKELILFS ADLQRSIPSMVDGLKP
Sbjct: 648  FSKKKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKP 707

Query: 1081 GQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLL 1260
            GQRKILFC+FKRNF+K+AK+AQF GYVSE+SAYHHGEQSLA+TII MAQDFVGSNNINLL
Sbjct: 708  GQRKILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLL 767

Query: 1261 QPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPI 1440
             P GQFGTRHQGGKDHASARYI+T L+PITRFLFPKDDDILLDYLNEDGQSIEP+WY+P 
Sbjct: 768  LPNGQFGTRHQGGKDHASARYIYTRLSPITRFLFPKDDDILLDYLNEDGQSIEPTWYVPT 827

Query: 1441 IPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKS-A 1617
            IP+VLVNGSEGIGTGWSS IPNYNP+DI+ANV+RLLN E M+PMDPWYRGF+G IEK+  
Sbjct: 828  IPMVLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLNGEMMEPMDPWYRGFRGTIEKTDP 887

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYRE 1797
            TK+  + YT+ G+IEE++ TTLR++ELPVR+WTQDYKEFLES MTGNDKIK+PFIKDY+E
Sbjct: 888  TKQESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFLESIMTGNDKIKDPFIKDYKE 947

Query: 1798 HNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQIL 1977
            HNDD TVHFEV ++EEN+ +A+QEGL +KFKLTT IST+NMHLFDS   IKKY++PEQIL
Sbjct: 948  HNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSNMHLFDSNGTIKKYETPEQIL 1007

Query: 1978 EEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQ 2157
            EEFF LR  +YEKR                   RFILGVVR EI+V+ RKRADLF EL Q
Sbjct: 1008 EEFFHLRLEFYEKRKRVLLDNLELELLKLENKVRFILGVVRGEIIVSNRKRADLFHELHQ 1067

Query: 2158 KGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQ 2337
            K                                      A+DY+YL+SM I +LT EKVQ
Sbjct: 1068 K------------------------------------VRATDYEYLLSMAIGTLTLEKVQ 1091

Query: 2338 ELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEM--RMNHI 2511
            ELCA ++KL   VD+L++ +P+                       AE  RK++  R+   
Sbjct: 1092 ELCADRDKLNKGVDDLKKATPKALWITDLDALERELDEQDKNDARAEETRKQLKSRVMSE 1151

Query: 2512 AGVAPSKQGAKKPRKNT--ANKLSVSATTTD---------------------AGGQXXXX 2622
            AG+  S+Q  K PRKN   AN    +A T D                     A  +    
Sbjct: 1152 AGMKVSRQAPKNPRKNNKKANNAEPAAETMDVSASSAMEMESVPEVVKPKGRAAPRKAPA 1211

Query: 2623 XXXXXXQTVEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPSRNAA 2802
                   +V + ++D+E+  LK+RLAAYNL+SSPD  A     V       KK+PSR AA
Sbjct: 1212 KKKEMPTSVLKDEDDDEVHELKERLAAYNLESSPDGSAAMEAEVPQVPAARKKEPSRRAA 1271

Query: 2803 AKKA-----TYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAK--- 2958
            A+K      T +   DEDDE  + + +  +                   KP    AK   
Sbjct: 1272 AQKKPLASFTEISDDDEDDEDFEVEEVSASDVKKKGGRKPAANAKAAAAKPAAAAAKNKR 1331

Query: 2959 -ATRKRGPAQASKATTT-------------SQKVRKMRASPFNKKSGSVLSKPRNED--- 3087
             A  K+ P    +   T              +KVRKMRASPFNKKSGSVL     ED   
Sbjct: 1332 GAANKQQPQLLGQTLLTEIFKPAETLGISPEKKVRKMRASPFNKKSGSVLGSTGEEDETA 1391

Query: 3088 -----------XXXXXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
                                      RTRP+RE+R +   YV SDS
Sbjct: 1392 ETEENSGSASTSNSSGGESNEVVMPARTRPQRENRVQTR-YVVSDS 1436


>gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]
          Length = 1244

 Score = 1273 bits (3293), Expect = 0.0
 Identities = 635/866 (73%), Positives = 727/866 (83%), Gaps = 1/866 (0%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AHNVK+HLWVFVNALIDNPAFDSQTKETLT RQ S GSKCELS+DFLKKVAK GVV+ LL
Sbjct: 346  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVAKCGVVDNLL 405

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WA+FK SK+LKKTDGAK   I GIPKL+DAN+AGGRNSDKCTLILTEGDSAKALA++G+
Sbjct: 406  SWAEFKHSKDLKKTDGAKTGSIRGIPKLDDANEAGGRNSDKCTLILTEGDSAKALAVAGL 465

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            +VVGRN+YGVFPLRGKLLNVREA+HKQ+MDNAEIQN+K+ILGLQ GKEY + K LRYGHL
Sbjct: 466  AVVGRNHYGVFPLRGKLLNVREASHKQLMDNAEIQNLKRILGLQQGKEYSNVKSLRYGHL 525

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMP 720
            MIMTDQDHDGSHIKGLLINFIH+FWPSLLKVPSFMVEFITP++KAT+ +TK VLSFYSMP
Sbjct: 526  MIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFMVEFITPIVKATH-KTKGVLSFYSMP 584

Query: 721  EFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELA 900
            E+E WKESLGGN+ GWSIKYYKGLGTS S+EGK+YF+N+  H+KEFVW D QDGE+IELA
Sbjct: 585  EYEFWKESLGGNAKGWSIKYYKGLGTSTSKEGKDYFKNLDKHRKEFVWQDEQDGEAIELA 644

Query: 901  FSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKP 1080
            FSKKKIEARKNWLRQFEP  +LDQS+ LIKYS+FINKELILFS ADLQRSIPSM+DGLKP
Sbjct: 645  FSKKKIEARKNWLRQFEPGTHLDQSQKLIKYSEFINKELILFSMADLQRSIPSMIDGLKP 704

Query: 1081 GQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLL 1260
            GQRKILFC+FKRNFVK+AKVAQF GYVSE+SAYHHGEQSLA+TI+ MAQDFVGSNNINLL
Sbjct: 705  GQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIVGMAQDFVGSNNINLL 764

Query: 1261 QPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPI 1440
             P GQFGTR+QGGKD ASARYIFT L+PITR+LFPKDDD LLDYLNEDGQSIEP WY+PI
Sbjct: 765  NPGGQFGTRNQGGKDAASARYIFTNLSPITRYLFPKDDDGLLDYLNEDGQSIEPIWYVPI 824

Query: 1441 IPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSAT 1620
            IP+VLVNGSEGIGTGWSSYIPNYNP+DIVANV+RLLN E M+PM PWYRGFKG IEK+A+
Sbjct: 825  IPMVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEQMEPMHPWYRGFKGNIEKTAS 884

Query: 1621 KEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYREH 1800
            KE G+TYTITG+IEE+D TTLR+TELPVRRWTQDY+EFLES +TGND    PFIK++R++
Sbjct: 885  KEAGVTYTITGIIEEVDETTLRITELPVRRWTQDYREFLESIITGND----PFIKEFRQY 940

Query: 1801 NDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQILE 1980
            +DD TV FEV +TEENM +A+QEGL KKFKLTTTIST+NMHLFDSK +IKKYD+PEQILE
Sbjct: 941  SDDTTVEFEVILTEENMMVAKQEGLLKKFKLTTTISTSNMHLFDSKGMIKKYDTPEQILE 1000

Query: 1981 EFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQK 2160
            EFF LRF +YEKR                   RFILGVV+ EI+VN RKRADLFLELQ K
Sbjct: 1001 EFFHLRFEFYEKRKKLLLDNLEMELLKMENKVRFILGVVKGEIIVNNRKRADLFLELQTK 1060

Query: 2161 GFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQE 2340
            GFTPFPKK K ++ AVAGA+++  E EE+ +    G  ASDYDYL+SM I SLT EKVQE
Sbjct: 1061 GFTPFPKKAKTVEVAVAGATDDTEETEENSEVSAKGLQASDYDYLLSMAIGSLTLEKVQE 1120

Query: 2341 LCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIAGV 2520
            LCA ++KL+ EV++LR+ +P++                      AE A K ++    AG 
Sbjct: 1121 LCADRDKLQQEVEDLRKATPKS-LWLKDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGK 1179

Query: 2521 APSKQGAKKPRK-NTANKLSVSATTT 2595
               +Q  K PRK N   K + + T T
Sbjct: 1180 RAQRQAPKIPRKINKKEKNAETVTET 1205


>ref|XP_006647737.1| PREDICTED: DNA topoisomerase 2-like [Oryza brachyantha]
          Length = 1506

 Score = 1264 bits (3272), Expect = 0.0
 Identities = 663/1085 (61%), Positives = 787/1085 (72%), Gaps = 61/1085 (5%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGS GS+C+LS+DFLKKV  S +V  LL
Sbjct: 356  AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSFGSECKLSEDFLKKVGSSAIVTNLL 415

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WADFK SKEL+KTDG+KR R+TGIPKLEDAN AGG++S  CTLILTEGDSAKALAM+GI
Sbjct: 416  SWADFKLSKELQKTDGSKRSRLTGIPKLEDANGAGGKDSQMCTLILTEGDSAKALAMAGI 475

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            +VVGR+ YGVFPLRGKLLNVREA+HKQIM+NAEIQNIKQILGLQHGK+YDS KGLRYGHL
Sbjct: 476  AVVGRDRYGVFPLRGKLLNVREASHKQIMENAEIQNIKQILGLQHGKQYDSTKGLRYGHL 535

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTK-TVLSFYSM 717
            MIMTDQDHDGSHIKGLLINFIH+FWPSL+K+PSF+VEFITP++KATN R K  VL FYSM
Sbjct: 536  MIMTDQDHDGSHIKGLLINFIHSFWPSLIKIPSFLVEFITPIIKATNKRDKKNVLPFYSM 595

Query: 718  PEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIEL 897
            PE+E WKESLGGN+ GWSIKYYKGLGTS S EG++YF++I  HKK+FVW + QD ++IEL
Sbjct: 596  PEYEQWKESLGGNARGWSIKYYKGLGTSTSTEGRQYFQDIAKHKKDFVWANDQDDDNIEL 655

Query: 898  AFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLK 1077
            AFSKK+I  RK+WL  F+P  YLDQ +  IKYSDFINKELI FS ADL RSIPSMVDGLK
Sbjct: 656  AFSKKRITDRKDWLSNFQPGTYLDQHDKYIKYSDFINKELIQFSMADLLRSIPSMVDGLK 715

Query: 1078 PGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINL 1257
            PGQRKILFC+FKRN VK+ KVAQF GYVSE+SAYHHGEQSLA+TI  MAQDFVGSNNINL
Sbjct: 716  PGQRKILFCSFKRNLVKETKVAQFSGYVSEHSAYHHGEQSLASTITGMAQDFVGSNNINL 775

Query: 1258 LQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMP 1437
            L P GQFGTR QGGKD ASARYI+T LAPITR +FPKDDDILL+YL+EDGQSIEP+WY+P
Sbjct: 776  LLPLGQFGTRDQGGKDAASARYIYTQLAPITRSIFPKDDDILLNYLDEDGQSIEPTWYVP 835

Query: 1438 IIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSA 1617
            I+P+VLVNGSEGIGTGWS++IPNYNP+DIVAN++RLLNNEP++PMDPWYRGFKG I+K++
Sbjct: 836  ILPMVLVNGSEGIGTGWSTFIPNYNPRDIVANLRRLLNNEPVEPMDPWYRGFKGSIQKTS 895

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIK--------- 1770
            TK GG++YT+TG+IE +D TTLR+TELP+RRW+QDYKEFL  S+ G DK K         
Sbjct: 896  TKAGGVSYTVTGIIEVLDDTTLRITELPIRRWSQDYKEFL-ISIGGMDKSKDKDKGKGKG 954

Query: 1771 -----------EPFIKDYREHNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTN 1917
                       EPFI+ +  H+DDK V F +++++ENM IA+QEGLEKKFKLTTTI TTN
Sbjct: 955  KEKEKDKDKDIEPFIEVFDTHSDDKNVEFLITLSKENMAIAKQEGLEKKFKLTTTIGTTN 1014

Query: 1918 MHLFDSKSVIKKYDSPEQILEEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVV 2097
            MHLFDS   I+KYD+PE IL+EFF LR  +YEKR                   RFIL VV
Sbjct: 1015 MHLFDSNGKIRKYDTPEDILQEFFGLRLEFYEKRKRVLLENIELELKKLSNKVRFILAVV 1074

Query: 2098 RDEIVVNKRKRADLFLELQQKGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALA 2277
              +I+VN RKRADLF+EL+QKGF PFPKK +  + A  GASEED E EESP+  K G  +
Sbjct: 1075 EGDIIVNNRKRADLFVELRQKGFDPFPKKIQSTEPAAVGASEEDEENEESPETVK-GVSS 1133

Query: 2278 SDYDYLMSMRIDSLTEEKVQELCAQKEKLEAEVDELRRTSPQ-TXXXXXXXXXXXXXXXX 2454
            SDY+YL+SM I +LT EKVQEL A+K +LE  V EL+ T+P+                  
Sbjct: 1134 SDYEYLLSMSIGTLTLEKVQELIAEKGRLENGVAELKGTTPKLLWMRDLDEFEKQLDVLD 1193

Query: 2455 XXXXXXAEGARKEMRMNHIAGVAPSKQGAKKPRKNTANKLSV-----------------S 2583
                  AE  R    + H  GVAP     ++P+K   N  +                  +
Sbjct: 1194 EEDRINAEERRSTRNVGH--GVAPKAAARRRPKKTATNSEAAEITDGNVAAAAAVVRKPT 1251

Query: 2584 ATTTDAGGQXXXXXXXXXXQTVEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTV--V 2757
            A T                  +   DE++E+LALKDRLAAY LD + ++ AMET+T    
Sbjct: 1252 AVTAIPKPAAQKKQPVKKASIISSDDEEDEVLALKDRLAAYKLDDNSEDTAMETETAEEQ 1311

Query: 2758 SDQGKAKKQPSRNAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRK 2937
            +   K KK+PS+  AAKKA   L+   DD+ +  + +                    GRK
Sbjct: 1312 TKTKKGKKEPSKRGAAKKALSSLAELSDDDEDATEPI--DKEDEEDFAMEVQVKKGRGRK 1369

Query: 2938 PKNETAK-ATRKRGPAQ-------------------ASKATTTSQKVRKMRASPFNKKSG 3057
            P  E  K ATRKR PAQ                   ++ A +  +KVRKMR SPF+KKSG
Sbjct: 1370 PAAEKPKAATRKRAPAQGKSMRQKVMEEIFKPTEDSSTSAPSPEKKVRKMRVSPFHKKSG 1429

Query: 3058 SVLSK 3072
            SVL +
Sbjct: 1430 SVLQR 1434


>ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum tuberosum]
          Length = 1485

 Score = 1260 bits (3260), Expect = 0.0
 Identities = 666/1127 (59%), Positives = 809/1127 (71%), Gaps = 63/1127 (5%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKS-GVVNTL 177
            AH VK+HLW+FVNALIDNPAFDSQTKETLT RQ S GSKCEL  DFLKKV K+ G+V++L
Sbjct: 346  AHAVKNHLWMFVNALIDNPAFDSQTKETLTLRQSSFGSKCELQPDFLKKVEKNIGIVDSL 405

Query: 178  LTWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSG 357
            L+WADFK SK+LKKTDG K  ++  + KLEDANDAGGRNSDKCTLILTEGDSAKALAM+G
Sbjct: 406  LSWADFKNSKDLKKTDGKKSDKVK-VEKLEDANDAGGRNSDKCTLILTEGDSAKALAMAG 464

Query: 358  ISVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGH 537
            ISVVGR++YGVFPLRGKLLNVREA+HKQ+ +N EI++IK+ILGLQ GKEY+S K LRYGH
Sbjct: 465  ISVVGRDHYGVFPLRGKLLNVREASHKQVSENKEIESIKKILGLQTGKEYESVKSLRYGH 524

Query: 538  LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSM 717
            LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSF+VEFITP++KAT+ ++  +L+FY+M
Sbjct: 525  LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFLVEFITPIVKATH-KSGRILAFYTM 583

Query: 718  PEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIEL 897
            PE+EAW+ SLG  S+GWSIKYYKGLGTS S+EGKEYF+++  H+K+F+W D QDGESIEL
Sbjct: 584  PEYEAWRRSLGATSSGWSIKYYKGLGTSTSKEGKEYFQDLQKHRKDFIWADNQDGESIEL 643

Query: 898  AFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLK 1077
            AFSKKKIEARKNWLRQFEP  +LDQ E  I Y++F+NKELILFS ADLQRSIPSM+DGLK
Sbjct: 644  AFSKKKIEARKNWLRQFEPGTHLDQKEKYISYTEFVNKELILFSMADLQRSIPSMLDGLK 703

Query: 1078 PGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINL 1257
            PGQRKILFCAFKRNFVK+AKV+QF GYVSE+SAYHHGEQSL++TII MAQD+VGSNN+NL
Sbjct: 704  PGQRKILFCAFKRNFVKEAKVSQFSGYVSEHSAYHHGEQSLSSTIIGMAQDYVGSNNVNL 763

Query: 1258 LQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMP 1437
            LQP GQFGTR+ GGKDHAS+RYI+T L+PI RFLFPKDDD +LDYLNEDGQSIEP+WY+P
Sbjct: 764  LQPNGQFGTRNMGGKDHASSRYIYTRLSPIARFLFPKDDDTVLDYLNEDGQSIEPTWYIP 823

Query: 1438 IIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSA 1617
            IIP+VLVNGSEGIGTGWSSY+PNYNP+D+VANV+RLLN+E M+PMDPWY+GFKG IEK+A
Sbjct: 824  IIPMVLVNGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGTIEKTA 883

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYRE 1797
            TKE G TYT+TG+IEE   TTLR++ELPVRRWT+DYK+FLES     DK K+ FIK+ R 
Sbjct: 884  TKETGATYTVTGIIEEFSETTLRISELPVRRWTEDYKQFLESMTVSTDKSKDAFIKEVRA 943

Query: 1798 HNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQIL 1977
            + D+ +V FEV ++EEN+ +A+QEGL KKFKLTTTIST+NMHLFDSK  IKKYD+PE+IL
Sbjct: 944  YGDENSVCFEVIMSEENLLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEIL 1003

Query: 1978 EEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQ 2157
            EEF+ +R  YYEKR                   RFILGVV+ EI+VN RKRADL LEL+ 
Sbjct: 1004 EEFYHVRLEYYEKRKKTLLEILELELLRIENKVRFILGVVKGEIIVNNRKRADLLLELKN 1063

Query: 2158 KGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQ 2337
            KGFTPFPKK K ++A VA ++++  + EESP+    G  ASDYDYL+SM I +LT EKVQ
Sbjct: 1064 KGFTPFPKK-KPVEAVVADSTDDAEDSEESPEESNKGVRASDYDYLLSMAIGTLTLEKVQ 1122

Query: 2338 ELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEM--RMNHI 2511
            ELCA ++KL AEV+++R  +P+                        E AR+++  ++ + 
Sbjct: 1123 ELCADRDKLNAEVEDMRNATPKDLWMKDLDVLDKQLDEQDKLDIQTEEAREKLKKKVMNA 1182

Query: 2512 AGVAPSKQGAKKPRK-----NTANKLSVS-------ATTTDA------GGQXXXXXXXXX 2637
            AG AP  +  K  +K     +TA  + VS       A  T+       GG          
Sbjct: 1183 AGKAPKPKPRKTTKKAAVVESTAEPMDVSVGSMAETANVTEVAKPKGRGGGSKKAPAKAK 1242

Query: 2638 XQTVEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPSRNAAAKK-- 2811
               VE+ +E++E+LALKDRLAAYNL+SSPD   +        Q KA   P++ AAA+K  
Sbjct: 1243 PVVVEDEEEEDEVLALKDRLAAYNLNSSPDRSEVTETEAPKAQTKA---PAKRAAAQKKA 1299

Query: 2812 --ATYVLSSDEDD-EPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETA----KATRK 2970
              +T  +S  ED+ E        P +                GRKP    A    K  +K
Sbjct: 1300 LPSTPDVSEGEDEIEISDDNEFAPEV--------AVGGKKKGGRKPAAAKAAAAPKPPKK 1351

Query: 2971 RGPAQASK------------------ATTTSQKVRKMRASPFNKKSGSVLSK-------- 3072
            R PA                        +  +KVRKMR SPFNKKSG+V+ +        
Sbjct: 1352 RAPANKQSQSVGQRLITQVLKPAEDAGVSPDRKVRKMRESPFNKKSGAVMGRNTSSSSST 1411

Query: 3073 -------PRNEDXXXXXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
                   P                   + RP+R +RTK   YV SDS
Sbjct: 1412 SHESEVSPPIPSLGSLEEEVSEVVVAPKARPQRANRTK-TTYVISDS 1457


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score = 1257 bits (3253), Expect = 0.0
 Identities = 670/1141 (58%), Positives = 812/1141 (71%), Gaps = 77/1141 (6%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKS-GVVNTL 177
            AH VK+HLW+FVNALIDNPAFDSQTKETLT RQ S GSKCEL  DFLKKV K+ G+V TL
Sbjct: 345  AHAVKNHLWMFVNALIDNPAFDSQTKETLTLRQSSFGSKCELQPDFLKKVEKNIGIVETL 404

Query: 178  LTWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSG 357
            L+WADFK SK+LKKTDG K +++  + KLEDANDAGGRNS+KCTLILTEGDSAKALAM+G
Sbjct: 405  LSWADFKNSKDLKKTDGKKSEKVK-VEKLEDANDAGGRNSEKCTLILTEGDSAKALAMAG 463

Query: 358  ISVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGH 537
            ISVVGR++YGVFPLRGKLLNVREA+HKQ+ +N EI+ IK+ILGLQ GKEYDS K LRYGH
Sbjct: 464  ISVVGRDHYGVFPLRGKLLNVREASHKQVSENKEIEAIKKILGLQTGKEYDSVKSLRYGH 523

Query: 538  LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSM 717
            LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSF++EFITP++KAT+   K +LSFY+M
Sbjct: 524  LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFLIEFITPIVKATHKSGK-ILSFYTM 582

Query: 718  PEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIEL 897
            PE+E+W++SLG NS+GWSIKYYKGLGTS S+EGKEYF+++  H+K+F+W D QDGESIEL
Sbjct: 583  PEYESWRKSLGANSSGWSIKYYKGLGTSTSKEGKEYFQDLQKHRKDFIWADNQDGESIEL 642

Query: 898  AFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLK 1077
            AFSKKKIEARKNWLRQFEP  +LDQ E  I Y++F+NKELILFS ADLQRSIPSM+DGLK
Sbjct: 643  AFSKKKIEARKNWLRQFEPGTHLDQKEKYISYTEFVNKELILFSMADLQRSIPSMLDGLK 702

Query: 1078 PGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINL 1257
            PGQRKILFCAFKRNFVK+AKV+QF GYVSE+SAYHHGEQSL++TII MAQD+VGSNN+NL
Sbjct: 703  PGQRKILFCAFKRNFVKEAKVSQFSGYVSEHSAYHHGEQSLSSTIIGMAQDYVGSNNVNL 762

Query: 1258 LQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMP 1437
            LQP GQFGTR+ GGKDHAS+RYI+T L+PI RFLFPK+DD + DYLNEDGQ IEP+WY+P
Sbjct: 763  LQPNGQFGTRNMGGKDHASSRYIYTRLSPIARFLFPKEDDTIHDYLNEDGQYIEPTWYVP 822

Query: 1438 IIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSA 1617
            I+P+VL+NGSEGIGTGWSSY+PNYNP+D+VANV+RLLN+EPM+PMDPWY+GFKG IEK+A
Sbjct: 823  IVPMVLINGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDEPMEPMDPWYKGFKGTIEKTA 882

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYRE 1797
            TKE G TYT+TG+IEE++ TTLR++ELPVRRWT+DYK+FLES    NDK K+PFIK+ R 
Sbjct: 883  TKEAGATYTVTGIIEEVNETTLRISELPVRRWTEDYKQFLESMTVSNDKAKDPFIKEVRA 942

Query: 1798 HNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQIL 1977
            + D+ +V FEV ++EEN+ +A+QEGL KKFKL TTIST+NMHLFDS   IKKYD+PE IL
Sbjct: 943  YGDENSVCFEVIMSEENLILAQQEGLLKKFKLATTISTSNMHLFDSNGKIKKYDNPEDIL 1002

Query: 1978 EEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQ 2157
            EEF+ +R  YYEKR                   +FILGVV+ EI+VN RKRADL LEL++
Sbjct: 1003 EEFYHVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKVEIIVNNRKRADLLLELKE 1062

Query: 2158 KGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQ 2337
            KGFTPFPKK K ++A VA  S+   + E+S +    G  A DYDYL+SM I +LT EKVQ
Sbjct: 1063 KGFTPFPKK-KAVEAVVADTSD---DAEDSEEELNRGVRAGDYDYLLSMPIGTLTLEKVQ 1118

Query: 2338 ELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIAG 2517
            ELCA++++L  EV+++R  +P+                       AE AR++++   +  
Sbjct: 1119 ELCAERDQLNGEVEDMRNATPKLLWLKDLDVLEKQLDEQDKIDIQAEEAREKIK-KKVMN 1177

Query: 2518 VAPSKQGAKKPRKNTANKLSVSATTTD-------------------------AGGQXXXX 2622
             A  K    KPRKN   K SV  +T +                          G +    
Sbjct: 1178 AAGLKAPKPKPRKN-VKKASVVESTAEPMDRVSCFNSGNRSNVTEVVKPKARGGSKKAPA 1236

Query: 2623 XXXXXXQTVEESDEDEEILALKDRLAAYNLDSSPDNG--AMETDTVVSDQGKAKKQPSRN 2796
                     EE +ED+E+LALKDRLAAYNL+SSPD+   AMET+   +     KK P+R 
Sbjct: 1237 KAKPIAVEDEEEEEDDEVLALKDRLAAYNLNSSPDHSAEAMETEAPKAQ----KKAPTRK 1292

Query: 2797 AAAKKAT-------------YVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRK 2937
            AAAKK T               +S D++ EPE                         GRK
Sbjct: 1293 AAAKKKTLPSIADVSEGEDEIEISDDDESEPE----------------VAVGGKKKGGRK 1336

Query: 2938 PKNETAKAT--------RKRG-------------------PAQASKATTTSQKVRKMRAS 3036
            P   TAKA         +KRG                   PA+ +  ++  +KVRKMRAS
Sbjct: 1337 P--ATAKAAPAAAKQPPKKRGPANKQAVGIGQKLITSILKPAENTDNSSPEKKVRKMRAS 1394

Query: 3037 PFNKKSGSVLSKPR------NEDXXXXXXXXXXXXXXXR--TRPK-RESRTKAAVYVESD 3189
            PFN+KSG+VL K +      NED                    PK R +R K   YV SD
Sbjct: 1395 PFNEKSGAVLGKNKGSTLQENEDASPVSSLGSLEDEVNEAVVAPKARVTRGKKTTYVISD 1454

Query: 3190 S 3192
            S
Sbjct: 1455 S 1455


>ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus sinensis]
          Length = 1456

 Score = 1256 bits (3251), Expect = 0.0
 Identities = 676/1112 (60%), Positives = 807/1112 (72%), Gaps = 48/1112 (4%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKV-AKSGVVNTL 177
            AHNVK+HLWVFVNALIDNPAFDSQTKETLT RQ S GSKCELS++FLKKV AKSG+V TL
Sbjct: 344  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETL 403

Query: 178  LTWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSG 357
            L+WA+FKQSK+LKK DG K + + GI KL+DAN AGGRNS++CTLILTEGDSAKALAM+G
Sbjct: 404  LSWANFKQSKDLKKNDGTKTEDVRGISKLDDANLAGGRNSEQCTLILTEGDSAKALAMAG 463

Query: 358  ISVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGH 537
            +SVVGR+ +GVFPLRGKLLNVREA+  Q+++N+EI NIK+ILGL+ G EY++ K LRYGH
Sbjct: 464  LSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGH 523

Query: 538  LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSM 717
            LMIMTDQDHDGSHIKGLLINFIH+FWPSLLK+PSF+VEFITP++KATN   K VLSFYSM
Sbjct: 524  LMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSM 582

Query: 718  PEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIEL 897
            P++EAWKESLGGN++ WSIKYYKGLGTS S+EGKEYF+NI +HKK+FVW D QDGE+IEL
Sbjct: 583  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 642

Query: 898  AFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLK 1077
            AFSKKKIEARK WL QFEP N+LDQ E  IKYSDF+NKELILFS ADLQRSIPSMVDGLK
Sbjct: 643  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 702

Query: 1078 PGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINL 1257
            PGQRKILFC+FKRNF+K+AKVAQF GYVSE+SAYHHGEQSLA+TI+ MAQDFVGSNNINL
Sbjct: 703  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 762

Query: 1258 LQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMP 1437
            LQP GQFGTR+QGGKD ASARYIFT L+PITRFLFPKDDD LLDYLNEDGQ IEP+WYMP
Sbjct: 763  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 822

Query: 1438 IIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSA 1617
            IIP VLVNGSEGIGTGWSSYIPNYNP+DIVANV+RLLN E M+PM PWYRGF+G IEK+A
Sbjct: 823  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTA 882

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYRE 1797
            +KE G+TYT+TG+IEE++ TTLR+ ELP+RRWTQDY+EFLES +  ND     FI+ +R+
Sbjct: 883  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQ 938

Query: 1798 HNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQIL 1977
            ++DD TV FEV ++EE+M   +QEGL KKFKLTTTIST+NMHLFDSK VIKKYD+PEQIL
Sbjct: 939  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 998

Query: 1978 EEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQ 2157
            EEFF +R  +YEKR                   RFILGVV  EIVVN RKR DL LEL+Q
Sbjct: 999  EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1058

Query: 2158 KGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQ 2337
            KGFTPFPK +K I+A VAGA++E  E EE+P+    G  + DYDYL+SM I +LT EKVQ
Sbjct: 1059 KGFTPFPKNSKSIEAVVAGATDETEESEENPEV-VNGVQSIDYDYLLSMAIGTLTLEKVQ 1117

Query: 2338 ELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIAG 2517
             L A ++KL  EVD+LR+ +P++                      AE  R +++ N  + 
Sbjct: 1118 GLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNSD 1177

Query: 2518 VAP---SKQGAKKPRKNTANKLSVSATTTDAGGQ-----------XXXXXXXXXXQTVEE 2655
              P   +K+  K  RKN  +K S +A  T+A G+                     + +++
Sbjct: 1178 AGPKIVAKRAPKNARKN--DKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDD 1235

Query: 2656 SDEDE------EILALKDRLAAYNLDSSPD-NGAMETDTVVSDQGKAKKQPSRNAAAKKA 2814
             +EDE       +  L ++LA+  L+ SPD +G MET+  V    K K+   R AA KKA
Sbjct: 1236 EEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEK-VQVPAKKKEPSKRTAAQKKA 1294

Query: 2815 TYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNET-----AKATRKRGP 2979
              V +SD +DE       +                   GRK    T     A  T+KRGP
Sbjct: 1295 VTVETSDSEDE-------IIIDDDEAFEIAAPEAGKKGGRKAAGNTKAAKPAAETKKRGP 1347

Query: 2980 AQAS---------------KATTTS--QKVRKMRASPFNKKSGSVLSK----PRNEDXXX 3096
            A+                 K T +S  +KVRKMRASPFNKKSGS+L +            
Sbjct: 1348 AKKQQPEASLGQRLLTEMLKPTESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSP 1407

Query: 3097 XXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
                        + RP+R +R +A  YV SDS
Sbjct: 1408 STSEEVAEVLPPKARPQRANRRQAR-YVLSDS 1438


>ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541275|gb|ESR52319.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1456

 Score = 1256 bits (3251), Expect = 0.0
 Identities = 676/1112 (60%), Positives = 807/1112 (72%), Gaps = 48/1112 (4%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKV-AKSGVVNTL 177
            AHNVK+HLWVFVNALIDNPAFDSQTKETLT RQ S GSKCELS++FLKKV AKSG+V TL
Sbjct: 344  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETL 403

Query: 178  LTWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSG 357
            L+WA+FKQSK+LKK DG K + + GI KL+DAN AGGRNS++CTLILTEGDSAKALAM+G
Sbjct: 404  LSWANFKQSKDLKKNDGTKTEDVRGISKLDDANLAGGRNSEQCTLILTEGDSAKALAMAG 463

Query: 358  ISVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGH 537
            +SVVGR+ +GVFPLRGKLLNVREA+  Q+++N+EI NIK+ILGL+ G EY++ K LRYGH
Sbjct: 464  LSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGH 523

Query: 538  LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSM 717
            LMIMTDQDHDGSHIKGLLINFIH+FWPSLLK+PSF+VEFITP++KATN   K VLSFYSM
Sbjct: 524  LMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSM 582

Query: 718  PEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIEL 897
            P++EAWKESLGGN++ WSIKYYKGLGTS S+EGKEYF+NI +HKK+FVW D QDGE+IEL
Sbjct: 583  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 642

Query: 898  AFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLK 1077
            AFSKKKIEARK WL QFEP N+LDQ E  IKYSDF+NKELILFS ADLQRSIPSMVDGLK
Sbjct: 643  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 702

Query: 1078 PGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINL 1257
            PGQRKILFC+FKRNF+K+AKVAQF GYVSE+SAYHHGEQSLA+TI+ MAQDFVGSNNINL
Sbjct: 703  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 762

Query: 1258 LQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMP 1437
            LQP GQFGTR+QGGKD ASARYIFT L+PITRFLFPKDDD LLDYLNEDGQ IEP+WYMP
Sbjct: 763  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 822

Query: 1438 IIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSA 1617
            IIP VLVNGSEGIGTGWSSYIPNYNP+DIVANV+RLLN E M+PM PWYRGF+G IEK+A
Sbjct: 823  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTA 882

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYRE 1797
            +KE G+TYT+TG+IEE++ TTLR+ ELP+RRWTQDY+EFLES +  ND     FI+ +R+
Sbjct: 883  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQ 938

Query: 1798 HNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQIL 1977
            ++DD TV FEV ++EE+M   +QEGL KKFKLTTTIST+NMHLFDSK VIKKYD+PEQIL
Sbjct: 939  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 998

Query: 1978 EEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQ 2157
            EEFF +R  +YEKR                   RFILGVV  EIVVN RKR DL LEL+Q
Sbjct: 999  EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1058

Query: 2158 KGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQ 2337
            KGFTPFPK +K I+A VAGA++E  E EE+P+    G  + DYDYL+SM I +LT EKVQ
Sbjct: 1059 KGFTPFPKNSKSIEAVVAGATDETEESEENPEV-VNGVQSIDYDYLLSMAIGTLTLEKVQ 1117

Query: 2338 ELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIAG 2517
             L A ++KL  EVD+LR+ +P++                      AE  R +++ N  + 
Sbjct: 1118 GLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNSD 1177

Query: 2518 VAP---SKQGAKKPRKNTANKLSVSATTTDAGGQ-----------XXXXXXXXXXQTVEE 2655
              P   +K+  K  RKN  +K S +A  T+A G+                     + +++
Sbjct: 1178 AGPKIVAKRAPKNARKN--DKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDD 1235

Query: 2656 SDEDE------EILALKDRLAAYNLDSSPD-NGAMETDTVVSDQGKAKKQPSRNAAAKKA 2814
             +EDE       +  L ++LA+  L+ SPD +G MET+  V    K K+   R AA KKA
Sbjct: 1236 EEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEK-VQVPAKKKEPSKRTAAQKKA 1294

Query: 2815 TYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAKA-----TRKRGP 2979
              V +SD +DE       +                   GRK    T  A     T+KRGP
Sbjct: 1295 VTVETSDSEDE-------IIIDDDEAFEIAAPEAGKKGGRKAAGNTKAAKPAVETKKRGP 1347

Query: 2980 AQAS---------------KATTTS--QKVRKMRASPFNKKSGSVLSK----PRNEDXXX 3096
            A+                 K T +S  +KVRKMRASPFNKKSGS+L +            
Sbjct: 1348 AKKQQPEASLGQRLLTEMLKPTESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSP 1407

Query: 3097 XXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
                        + RP+R +R +A  YV SDS
Sbjct: 1408 STSEEVAEVLPPKARPQRANRRQAR-YVLSDS 1438


>ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum lycopersicum]
          Length = 1477

 Score = 1255 bits (3248), Expect = 0.0
 Identities = 652/1065 (61%), Positives = 791/1065 (74%), Gaps = 41/1065 (3%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKS-GVVNTL 177
            AH VK+HLW+FVNALIDNPAFDSQTKETLT RQ S GSKCEL  DFLKKV K+ G+V++L
Sbjct: 346  AHAVKNHLWMFVNALIDNPAFDSQTKETLTLRQSSFGSKCELQPDFLKKVEKNIGIVDSL 405

Query: 178  LTWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSG 357
            L+WADFK SK+LKKTDG K  ++  + KLEDANDAGGRNSDKCTLILTEGDSAKALAM+G
Sbjct: 406  LSWADFKLSKDLKKTDGKKSDKVK-VEKLEDANDAGGRNSDKCTLILTEGDSAKALAMAG 464

Query: 358  ISVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGH 537
            ISVVGR++YGVFPLRGKLLNVREA+HKQ+ +N EI++IK+ILGLQ GKEYDS K LRYGH
Sbjct: 465  ISVVGRDHYGVFPLRGKLLNVREASHKQVSENKEIESIKKILGLQTGKEYDSVKSLRYGH 524

Query: 538  LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSM 717
            LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSF+VEFITP++KAT+ ++  +L+FY+M
Sbjct: 525  LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFLVEFITPIVKATH-KSGRILAFYTM 583

Query: 718  PEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIEL 897
            PE+EAW+ SLG  S+GWSIKYYKGLGTS S+EGKEYF+++  H+K+FVW D QDGESIEL
Sbjct: 584  PEYEAWRRSLGATSSGWSIKYYKGLGTSTSKEGKEYFQDLQKHRKDFVWADNQDGESIEL 643

Query: 898  AFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLK 1077
            AFSKKKIEARKNWLRQFEP  +LDQ E  I Y++F+NKELILFS ADLQRSIPSM+DGLK
Sbjct: 644  AFSKKKIEARKNWLRQFEPGTHLDQKEKYISYTEFVNKELILFSMADLQRSIPSMLDGLK 703

Query: 1078 PGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINL 1257
            PGQRKILFCAFKRNFVK+AKV+QF GYVSE+SAYHHGEQSL++TII MAQD+VGSNN+NL
Sbjct: 704  PGQRKILFCAFKRNFVKEAKVSQFSGYVSEHSAYHHGEQSLSSTIIGMAQDYVGSNNVNL 763

Query: 1258 LQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMP 1437
            LQP GQFGTR+ GGKDHAS+RYI+T L+PI RFLFPKDDD +LDYLNEDGQSIEP+WY+P
Sbjct: 764  LQPNGQFGTRNMGGKDHASSRYIYTRLSPIARFLFPKDDDTILDYLNEDGQSIEPTWYVP 823

Query: 1438 IIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSA 1617
            +IP VLVNGSEGIGTGWSSY+PNYNP+D+VANV+RLLN+E M+PMDPWY+GFKG+IEK+A
Sbjct: 824  VIPTVLVNGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDELMEPMDPWYKGFKGKIEKTA 883

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYRE 1797
            TKE G TYT+TG+IEE+  TTLR++ELPVRRWT+DYK+FLES     DK K+ FIK+ R 
Sbjct: 884  TKETGATYTVTGIIEEVSETTLRISELPVRRWTEDYKQFLESMTVSTDKAKDSFIKEVRA 943

Query: 1798 HNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQIL 1977
            + D+ +V FEV ++E+N+ +A+QEGL KKFKLTTTIST+NMHLFDSK  IKKYD+PE+IL
Sbjct: 944  YGDENSVCFEVIMSEDNLLLAQQEGLLKKFKLTTTISTSNMHLFDSKGKIKKYDAPEEIL 1003

Query: 1978 EEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQ 2157
            EEF+ +R  YYEKR                   +FILGVV+ EI+VN RKRA+L LEL+ 
Sbjct: 1004 EEFYHVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKGEIIVNNRKRAELLLELKN 1063

Query: 2158 KGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQ 2337
            KGFTPFPKK K ++A VA ++++  + EESP+    G  ASDYDYL+SM I +LT EKVQ
Sbjct: 1064 KGFTPFPKK-KPVEAVVADSTDDADDSEESPEESSRGVRASDYDYLLSMAIGTLTLEKVQ 1122

Query: 2338 ELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMR---MNH 2508
            ELCA ++KL AEV+++R  +P+                        E AR++++   MN 
Sbjct: 1123 ELCADRDKLNAEVEDMRNATPKHLWMKDLDVLDKQLDEQDKIDIQTEEAREKLKKKVMNA 1182

Query: 2509 IAGVAPSKQGAK--KPRKNTANKLSVS-ATTTDAGGQXXXXXXXXXXQ-------TVEES 2658
                AP  +  K  K  ++TA  + VS  +T +              +        VE+ 
Sbjct: 1183 AGKAAPKPKPRKTNKKAESTAESMDVSFGSTAETANVSEVVKPKGRGRPAKAKPIVVEDE 1242

Query: 2659 DEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPSRNAAAKK----ATYVL 2826
            +E++E+LALKDRLAAYNL+SSPD   +    V   Q KA   P++ AAA+K    +T  +
Sbjct: 1243 EEEDEVLALKDRLAAYNLNSSPDRSEVTETEVPKAQTKA---PAKRAAAQKKALPSTPDV 1299

Query: 2827 SSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAKATRKRGPAQASKATTT 3006
            S  ED          P                  GRKP    A A  K  P + + A   
Sbjct: 1300 SDGEDAIEIDDDEFEPA--------AAVGGKKKGGRKPAAAKAAAAPK-PPGKKAPANNQ 1350

Query: 3007 SQ-----------------------KVRKMRASPFNKKSGSVLSK 3072
            SQ                       KVRKMRASPFNKKSG+V+ K
Sbjct: 1351 SQSVGQRLITQVLKPAEDAGVSPDRKVRKMRASPFNKKSGAVMGK 1395


>ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541274|gb|ESR52318.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1455

 Score = 1252 bits (3240), Expect = 0.0
 Identities = 676/1112 (60%), Positives = 807/1112 (72%), Gaps = 48/1112 (4%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKV-AKSGVVNTL 177
            AHNVK+HLWVFVNALIDNPAFDSQTKETLT RQ S GSKCELS++FLKKV AKSG+V TL
Sbjct: 344  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETL 403

Query: 178  LTWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSG 357
            L+WA+FKQSK+LKK DG K + + GI KL+DAN AGGRNS++CTLILTEGDSAKALAM+G
Sbjct: 404  LSWANFKQSKDLKKNDGTKTEDVRGISKLDDANLAGGRNSEQCTLILTEGDSAKALAMAG 463

Query: 358  ISVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGH 537
            +SVVGR+ +GVFPLRGKLLNVREA+  Q+++N+EI NIK+ILGL+ G EY++ K LRYGH
Sbjct: 464  LSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGH 523

Query: 538  LMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSM 717
            LMIMTDQDHDGSHIKGLLINFIH+FWPSLLK+PSF+VEFITP++KATN   K VLSFYSM
Sbjct: 524  LMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSM 582

Query: 718  PEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIEL 897
            P++EAWKESLGGN++ WSIKYYKGLGTS S+EGKEYF+NI +HKK+FVW D QDGE+IEL
Sbjct: 583  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 642

Query: 898  AFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLK 1077
            AFSKKKIEARK WL QFEP N+LDQ E  IKYSDF+NKELILFS ADLQRSIPSMVDGLK
Sbjct: 643  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 702

Query: 1078 PGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINL 1257
            PGQRKILFC+FKRNF+K+AKVAQF GYVSE+SAYHHGEQSLA+TI+ MAQDFVGSNNINL
Sbjct: 703  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 762

Query: 1258 LQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMP 1437
            LQP GQFGTR+QGGKD ASARYIFT L+PITRFLFPKDDD LLDYLNEDGQ IEP+WYMP
Sbjct: 763  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 822

Query: 1438 IIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSA 1617
            IIP VLVNGSEGIGTGWSSYIPNYNP+DIVANV+RLLN E M+PM PWYRGF+G IEK+A
Sbjct: 823  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFRGTIEKTA 882

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYRE 1797
            +KE G+TYT+TG+IEE++ TTLR+ ELP+RRWTQDY+EFLES +  ND     FI+ +R+
Sbjct: 883  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQ 938

Query: 1798 HNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQIL 1977
            ++DD TV FEV ++EE+M   +QEGL KKFKLTTTIST+NMHLFDSK VIKKYD+PEQIL
Sbjct: 939  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 998

Query: 1978 EEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQ 2157
            EEFF +R  +YEKR                   RFILGVV  EIVVN RKR DL LEL+Q
Sbjct: 999  EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1058

Query: 2158 KGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQ 2337
            KGFTPFPK +K I+A VAGA++E  E EE+P+    G  + DYDYL+SM I +LT EKVQ
Sbjct: 1059 KGFTPFPKNSKSIEAVVAGATDETEESEENPEV-VNGVQSIDYDYLLSMAIGTLTLEKVQ 1117

Query: 2338 ELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIAG 2517
             L A ++KL  EVD+LR+ +P++                      AE  R +++ N  + 
Sbjct: 1118 GLLADRDKLNEEVDDLRKATPES-LWVKDLDALDMQLDLDKSDARAEEERMKIKGNGNSD 1176

Query: 2518 VAP---SKQGAKKPRKNTANKLSVSATTTDAGGQ-----------XXXXXXXXXXQTVEE 2655
              P   +K+  K  RKN  +K S +A  T+A G+                     + +++
Sbjct: 1177 AGPKIVAKRAPKNARKN--DKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDD 1234

Query: 2656 SDEDE------EILALKDRLAAYNLDSSPD-NGAMETDTVVSDQGKAKKQPSRNAAAKKA 2814
             +EDE       +  L ++LA+  L+ SPD +G MET+  V    K K+   R AA KKA
Sbjct: 1235 EEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEK-VQVPAKKKEPSKRTAAQKKA 1293

Query: 2815 TYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAKA-----TRKRGP 2979
              V +SD +DE       +                   GRK    T  A     T+KRGP
Sbjct: 1294 VTVETSDSEDE-------IIIDDDEAFEIAAPEAGKKGGRKAAGNTKAAKPAVETKKRGP 1346

Query: 2980 AQAS---------------KATTTS--QKVRKMRASPFNKKSGSVLSK----PRNEDXXX 3096
            A+                 K T +S  +KVRKMRASPFNKKSGS+L +            
Sbjct: 1347 AKKQQPEASLGQRLLTEMLKPTESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSP 1406

Query: 3097 XXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
                        + RP+R +R +A  YV SDS
Sbjct: 1407 STSEEVAEVLPPKARPQRANRRQAR-YVLSDS 1437


>dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japonica Group]
          Length = 1525

 Score = 1246 bits (3224), Expect = 0.0
 Identities = 669/1147 (58%), Positives = 798/1147 (69%), Gaps = 86/1147 (7%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQ S GSKCELS DFLKKV  S +V  LL
Sbjct: 353  AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQASFGSKCELSDDFLKKVGSSAIVLNLL 412

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WA+FK SKEL+KTDG+KR R+TGIPKLEDAN AGG++S+ CTLILTEGDSAKALAM+GI
Sbjct: 413  SWAEFKLSKELQKTDGSKRSRLTGIPKLEDANGAGGKDSNNCTLILTEGDSAKALAMAGI 472

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            SVVGR+YYGVFPLRGKLLNVREA+HKQIM+NAEIQNIKQILGLQHGK+YDS KGLRYGHL
Sbjct: 473  SVVGRDYYGVFPLRGKLLNVREASHKQIMENAEIQNIKQILGLQHGKQYDSTKGLRYGHL 532

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKT-VLSFYSM 717
            MIMTDQDHDGSHIKGLLINFIH+FWPSL+K+PSF+VEFITP++KATN R K  VL FYSM
Sbjct: 533  MIMTDQDHDGSHIKGLLINFIHSFWPSLIKIPSFLVEFITPIIKATNKRDKKIVLPFYSM 592

Query: 718  PEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIEL 897
            PE+E WKESLGGN++GWSIKYYKGLGTS S EG++YF++I  HKK+FVW + QD   IEL
Sbjct: 593  PEYEQWKESLGGNASGWSIKYYKGLGTSTSSEGRQYFQDIAKHKKDFVWKNDQDDNDIEL 652

Query: 898  AFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLK 1077
            AFSKK+I  RK WL  F+   +LD     IKYSDFINKELI FS ADL RSIPSMVDGLK
Sbjct: 653  AFSKKRITDRKEWLTNFQSGTHLDTEGKYIKYSDFINKELIQFSMADLLRSIPSMVDGLK 712

Query: 1078 PGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINL 1257
            PGQRKILFC+FKRN VK+ KVAQF GYVSE+SAYHHGEQSLA+TI  MAQDFVGSNNINL
Sbjct: 713  PGQRKILFCSFKRNLVKEIKVAQFSGYVSEHSAYHHGEQSLASTITGMAQDFVGSNNINL 772

Query: 1258 LQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMP 1437
            LQP GQFGTR QGGKD ASARYIFT L+PITR +FPKDDDILL+YL+EDGQSIEP+WY+P
Sbjct: 773  LQPNGQFGTRDQGGKDAASARYIFTLLSPITRSIFPKDDDILLNYLDEDGQSIEPTWYVP 832

Query: 1438 IIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSA 1617
            I+P+VLVNGSEGIGTGWS++IPNYNP+DIVAN++RLLN+EP++PMDPWYRGFKG I+K+ 
Sbjct: 833  ILPMVLVNGSEGIGTGWSTFIPNYNPRDIVANLRRLLNDEPVEPMDPWYRGFKGSIQKTG 892

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIK--------- 1770
            TK GG++YT+TG+IE +D TTLR+TELP+RRW+QDYKEFL  S+ G DK K         
Sbjct: 893  TKAGGVSYTVTGIIEVVDDTTLRITELPIRRWSQDYKEFL-ISIGGTDKSKDKDKDKGKG 951

Query: 1771 --------------EPFIKDYREHNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTIS 1908
                          EPFI+ +  ++DDK V F +++++ENM IA QEGLEKKFKLTTTI 
Sbjct: 952  KGKVKEKEKKEKDIEPFIEAFDTYSDDKNVEFLITLSKENMAIALQEGLEKKFKLTTTIG 1011

Query: 1909 TTNMHLFDSKSVIKKYDSPEQILEEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFIL 2088
            TTNMHLFDS   I+KYD+PE IL+EFF LR  +YEKR                   RFIL
Sbjct: 1012 TTNMHLFDSNGKIRKYDTPEDILKEFFGLRLEFYEKRKRVLLENIELELKKLSNKVRFIL 1071

Query: 2089 GVVRDEIVVNKRKRADLFLELQQKGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGG 2268
             VV  +I+VN RKRA+LF+EL+QKGF PFP+K +    +  GA EED E EESP+    G
Sbjct: 1072 AVVEGDIIVNNRKRAELFVELKQKGFDPFPRKKQRAGPSAVGAIEEDEENEESPEAANVG 1131

Query: 2269 ALASDYDYLMSMRIDSLTEEKVQELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXX 2448
              +SDY+YL+SM I +LT E+VQ+L A+K ++E EV EL+RT P++              
Sbjct: 1132 --SSDYEYLLSMAIGTLTLERVQQLIAEKGRMENEVAELKRTRPKSLWMRDLDAFEKELD 1189

Query: 2449 XXXXXXXXAEGARKEMRMNHIAGVAPSKQGAKK--------------------------- 2547
                        R+  R N   G AP+K   K+                           
Sbjct: 1190 ALDEKDSMDAEERRATR-NAGGGAAPNKAAPKRRPRKTATNTQAAESSDGNAAAPAVPKP 1248

Query: 2548 --PRKNTANKLSVSATTTDAGGQXXXXXXXXXXQTVEES------DEDEEILALKDRLAA 2703
              PRK  A K S++ +  +              Q  +++      DED+E+LALKDRLAA
Sbjct: 1249 AAPRKKPAGKASLADSEDEDYIAAIPKPAAQKKQPAKKASTQLSDDEDDEVLALKDRLAA 1308

Query: 2704 YNLDSSPDNGAMETDTVVSDQGKAK---KQPSRNAAAKKATYVLSSDEDDEPEQQQRLMP 2874
            YNLD   ++ AMET+T   +Q K K   K+PS+  AAKKA   L+   DDE E +   + 
Sbjct: 1309 YNLDDHSEDTAMETET-TEEQAKGKKGRKEPSKRGAAKKAISSLAVISDDE-EDETVPID 1366

Query: 2875 TIXXXXXXXXXXXXXXXXGRKPKNETAK-ATRKRGPAQ-------------------ASK 2994
                              G+KP  E  K ATRKR PAQ                   ++ 
Sbjct: 1367 EDDEDDFAMEEVPVKKGRGKKPAAEKPKAATRKRAPAQGKSMRQKVMEEMFKPTEDSSTS 1426

Query: 2995 ATTTSQKVRKMRASPFNKKSGSVLSK----PRNEDXXXXXXXXXXXXXXXRTRPKRESRT 3162
            A +  +KVRKMRASPF+KKSGSVL +      + +                 RPKR++R 
Sbjct: 1427 APSPEKKVRKMRASPFHKKSGSVLQRASTASTSTEETESSSPSGSSAEPVAARPKRQTRG 1486

Query: 3163 KAAVYVE 3183
                Y E
Sbjct: 1487 NKKSYQE 1493


>ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragaria vesca subsp. vesca]
          Length = 1469

 Score = 1246 bits (3223), Expect = 0.0
 Identities = 663/1115 (59%), Positives = 790/1115 (70%), Gaps = 51/1115 (4%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AHNVK++LWVFVNALIDNPAFDSQTKETLT R  S GSKCEL Q+FLKKVAKSGVV +LL
Sbjct: 349  AHNVKNYLWVFVNALIDNPAFDSQTKETLTIRPSSFGSKCELPQEFLKKVAKSGVVESLL 408

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WA+FK +K+LKKTDG K +R+  I KLEDAN AGGRNS+KCTLILTEGDSAKALAM+G+
Sbjct: 409  SWANFKNNKDLKKTDGTKTERLHNINKLEDANLAGGRNSEKCTLILTEGDSAKALAMAGL 468

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            +VVGR++YGVFPLRGKLLNVREA+  Q+ DN EI+NIK+ILGLQ  KEY + K LRYGHL
Sbjct: 469  AVVGRDHYGVFPLRGKLLNVREASTTQLRDNEEIKNIKKILGLQQDKEYTNIKSLRYGHL 528

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMP 720
            MIMTDQDHDGSHIKGLLINFIH+FWPSLLKVPSF+VEFITP++KAT+   K  L+FYSMP
Sbjct: 529  MIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITPIVKATHKNGKE-LAFYSMP 587

Query: 721  EFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELA 900
            E+EAW+ESL GN++GW+IKYYKGLGTS S+EG++YF+N+ MHKK+FVW+D +DGE+IELA
Sbjct: 588  EYEAWRESLRGNASGWTIKYYKGLGTSTSKEGRDYFQNLDMHKKDFVWIDERDGEAIELA 647

Query: 901  FSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKP 1080
            FSKKKIE RKNWLRQFEP  +LDQ E L+KYSDF++KELI FS ADLQRSIPSMVDGLKP
Sbjct: 648  FSKKKIEERKNWLRQFEPGTHLDQKEKLVKYSDFVHKELIQFSMADLQRSIPSMVDGLKP 707

Query: 1081 GQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLL 1260
            GQRKILFC+FKRNF+K+AKVAQF GYVSE+SAYHHGEQSLA+TII MAQD+VGSNNIN L
Sbjct: 708  GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQDYVGSNNINFL 767

Query: 1261 QPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPI 1440
            QP GQFGTR+ GGKDHASARYI+T L+PITRFLFPKDDD LLDYLNEDGQSIEP+WY+PI
Sbjct: 768  QPNGQFGTRNLGGKDHASARYIYTRLSPITRFLFPKDDDRLLDYLNEDGQSIEPTWYVPI 827

Query: 1441 IPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSAT 1620
            IP VLVNGSEGIGTGWSSYIPNYNP+DIVANV+RLLN + M PMDPWYRGF G IEK+  
Sbjct: 828  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGDEMVPMDPWYRGFTGFIEKT-V 886

Query: 1621 KEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYREH 1800
            KE G +YT  G+IEE++ TTLR++ELP+RRWTQDYKEFLES   GNDK K+PFI+ + +H
Sbjct: 887  KETGTSYTACGIIEEVNETTLRISELPIRRWTQDYKEFLESISQGNDKAKDPFIEGFTQH 946

Query: 1801 NDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQILE 1980
            +D  TV   V + EEN+  AR+EGL KKF+LTT+I+TTNMHLFD K VIKKYD+ EQILE
Sbjct: 947  SDHSTVEILVHLPEENLMAARKEGLLKKFRLTTSIATTNMHLFDPKGVIKKYDTAEQILE 1006

Query: 1981 EFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQK 2160
            EFF LR  +YEKR                   RFILGVV  EI+V+ RKRADLFLELQQK
Sbjct: 1007 EFFPLRLEFYEKRKKVLLDNLELELLKMENKVRFILGVVNGEIIVSNRKRADLFLELQQK 1066

Query: 2161 GFTPFPKKTKGIDAAVAGASEEDGEQEESPQPG-KGGALASDYDYLMSMRIDSLTEEKVQ 2337
            GFTPFPKKTK ++  VAGA+E+  E EE+ +     G   SDY+YL+SM I +LT E+V+
Sbjct: 1067 GFTPFPKKTKSVEPEVAGATEDTEETEENSETVISNGVRISDYEYLISMAIGTLTIERVE 1126

Query: 2338 ELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHI-- 2511
             L A ++K+  +V++LR ++P++                      A+ A+++ R N I  
Sbjct: 1127 ALLADRDKVNEQVNDLRGSTPKSLWLKDLDVLEAELNELEKSEALADEAKRKSRNNQIKN 1186

Query: 2512 AGVAPSKQGAKKPRKNT-----ANKLSVSATTTD------------------AGGQXXXX 2622
            A V    + A KPRKNT     A  +  S  T+                   A G     
Sbjct: 1187 APVGKVSKQAPKPRKNTKKVNNAEAIPESRETSSSSAMEIEKPPEVMKRRGVAAGSKKAP 1246

Query: 2623 XXXXXXQTV--EESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPSRN 2796
                   TV   + D+DEE+L LKDRLAAYNLDSSPD      +T V  +   KK+ S+ 
Sbjct: 1247 AKKQVKSTVVLSDDDDDEEMLDLKDRLAAYNLDSSPDK-----ETEVPLKPAQKKEASKK 1301

Query: 2797 AAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAKATRKRG 2976
            A  K        D+DD+ E +    P                    KP      A +KRG
Sbjct: 1302 ATLKDD----EDDDDDDFEVEIAAAPAAVKKGGRKPAGAAKAAAAAKP----PVAAKKRG 1353

Query: 2977 -----------------------PAQASKATTTSQKVRKMRASPFNKKSGSVLSKPRNED 3087
                                   PA  S   +   KVRKMR SPFNKKSGSVLS+   ED
Sbjct: 1354 AAAKKDTQTSSSSGQKLLTDMLKPAAESSGVSPDPKVRKMRESPFNKKSGSVLSRVNLED 1413

Query: 3088 XXXXXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
                           R RP+R +     + + SDS
Sbjct: 1414 EMNVSEEKTEAPAAGRARPQRAAARNRKMILVSDS 1448


>ref|XP_002314046.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550331162|gb|EEE88001.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1482

 Score = 1243 bits (3216), Expect = 0.0
 Identities = 667/1130 (59%), Positives = 795/1130 (70%), Gaps = 66/1130 (5%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AHNVK++LWVFVN LIDNPAFDSQTKETLT RQ S GSKCELS+DFLKKVAKS +V+ LL
Sbjct: 347  AHNVKNYLWVFVNCLIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVAKSDIVDNLL 406

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WA FK++KELKKTDG K  ++  +PKLEDAN+AGGR S+KCTLILTEGDSAKALA++G+
Sbjct: 407  SWAKFKENKELKKTDGTKTAKVN-VPKLEDANEAGGRYSEKCTLILTEGDSAKALAIAGV 465

Query: 361  ---SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRY 531
               S + RN+YGVFPLRGKLLNVREA  KQ+ +N EI++IK+ILGLQH K+Y + K LRY
Sbjct: 466  AGLSQMERNFYGVFPLRGKLLNVREATSKQLKENKEIESIKKILGLQHDKQYSNVKSLRY 525

Query: 532  GHLMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFY 711
            GHLMIMTDQDHDGSHIKGLLINFIH+FWPSLLKVPSF+VEFITP++KAT+ R  TVLSFY
Sbjct: 526  GHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITPIVKATH-RNGTVLSFY 584

Query: 712  SMPEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESI 891
            SMPE+E WKESL GN++GWSIKYYKGLGTS S+EGK+YF+N+  HKK+F+WMD  DG++I
Sbjct: 585  SMPEYEYWKESLSGNASGWSIKYYKGLGTSTSKEGKDYFKNLHKHKKDFLWMDELDGDAI 644

Query: 892  ELAFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDG 1071
            ELAFSKKKIEARKNWLRQ EP  +LD ++ +IKYSDFINKELILFS ADLQRSIPSMVDG
Sbjct: 645  ELAFSKKKIEARKNWLRQHEPGTHLDHNQKIIKYSDFINKELILFSMADLQRSIPSMVDG 704

Query: 1072 LKPGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNI 1251
            LKPGQRKILFC+FKRNFVK+AKV+QF GYVSE+SAYHHGEQSLA TII MAQDFVGSNNI
Sbjct: 705  LKPGQRKILFCSFKRNFVKEAKVSQFSGYVSEHSAYHHGEQSLAGTIIGMAQDFVGSNNI 764

Query: 1252 NLLQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWY 1431
            NLLQP GQFGTR  GGKDHASARYI+T L+PITRFLFPKDDD LL+YL+EDGQ+IEP+WY
Sbjct: 765  NLLQPNGQFGTRSVGGKDHASARYIYTQLSPITRFLFPKDDDGLLNYLDEDGQTIEPTWY 824

Query: 1432 MPIIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEK 1611
            MPIIP VLVNG EGIGTGWS++IPNYNP+D+VAN++RLLN E M+PM+PWYRGFKG IEK
Sbjct: 825  MPIIPTVLVNGCEGIGTGWSTFIPNYNPRDVVANIRRLLNGEMMEPMNPWYRGFKGTIEK 884

Query: 1612 SATKEGGL-TYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTG-----NDKIKE 1773
             A+KEGG  +YT+ G+I E++ TTLR+TELP+RRWT DYK FL S   G      +  K+
Sbjct: 885  GASKEGGCSSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTEGTRDENGNLPKD 944

Query: 1774 PFIKDYREHNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKK 1953
            PF+KD+R++ DD  VHFEV ++EENM +A+QEGL KKFKLTTTIST+NMHLFDS  VIKK
Sbjct: 945  PFVKDFRKYGDDAAVHFEVQLSEENMLVAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKK 1004

Query: 1954 YDSPEQILEEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRA 2133
            YD+PEQILE FF LR  YYE R                   RFILGVVR EI+VN RKRA
Sbjct: 1005 YDNPEQILENFFHLRLEYYETRKKVLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRA 1064

Query: 2134 DLFLELQQKGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRID 2313
            DL LEL QKGF   PKK+K   A VAGA+++  E E+SP     G  ASDYDYL+SM I 
Sbjct: 1065 DLLLELHQKGFNAIPKKSK---AVVAGATDDTEEAEDSPD--VSGVRASDYDYLLSMAIG 1119

Query: 2314 SLTEEKVQELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKE 2493
            +LT E+VQ+LCA ++KL  EVD LR+T+P+                       AE AR++
Sbjct: 1120 TLTLERVQQLCADRDKLNGEVDSLRKTTPKVLWVKDLEALEMQLDMLDEYDAEAEEARRK 1179

Query: 2494 MR---MNHIAGVAPSKQGAKKPRKNTANKLS--VSATTTD-------------------- 2598
            ++       AG   SKQ  K PRKNT   ++  VS  TT                     
Sbjct: 1180 LKGGGAKGEAGFKVSKQAPKYPRKNTKKAINEEVSVETTGTSSSFAIETASSENAAAVVK 1239

Query: 2599 ----AGGQXXXXXXXXXXQTVEESDEDEEILALKDRLAAYNLDSSPDNGA-METDT--VV 2757
                AG +            +++ DED+EI +LKDRL AY LDSSP+  A METD   V 
Sbjct: 1240 PKGRAGSKKAPAKMEKLSPVLDDFDEDDEIESLKDRLNAYRLDSSPEQSADMETDVLQVP 1299

Query: 2758 SDQGKAKKQPSRNAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRK 2937
            + +G A+K+P  N +       + SD +DEP         +                   
Sbjct: 1300 ARRGAARKKPLANVS-------VISDSEDEPNLDDDADVEVKALPETKKKGGRKAAAAND 1352

Query: 2938 PKNETAKATRKRGPAQASK------------------ATTTSQKVRKMRASPFNKKSGSV 3063
               +   AT++RGPA                        +  +KVRK+RASPFNKKSGSV
Sbjct: 1353 KAAKPPAATKRRGPASQQSQGLGQKLLTEMLKPAEGAGISPEKKVRKVRASPFNKKSGSV 1412

Query: 3064 LSKPRNED-------XXXXXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
            L +   ED                      R RP+R +R K   YV SDS
Sbjct: 1413 LGRIHKEDDTGSEPMSASSSENTDVIDVPARARPQRANR-KQTRYVLSDS 1461


>gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus persica]
          Length = 1471

 Score = 1237 bits (3201), Expect = 0.0
 Identities = 653/1072 (60%), Positives = 784/1072 (73%), Gaps = 48/1072 (4%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AHNVK++LWVFVNALIDNPAFDSQTKETLT R  S GSKCEL+  FL KVAKSG+V++LL
Sbjct: 352  AHNVKNYLWVFVNALIDNPAFDSQTKETLTIRPNSFGSKCELTPAFLTKVAKSGIVDSLL 411

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WA+FKQ+K+LKKTDG K +R+  I KLEDAN AGG+NS+KCTLILTEGDSAKALAM+G+
Sbjct: 412  SWANFKQNKDLKKTDGTKTERVHNINKLEDANLAGGKNSEKCTLILTEGDSAKALAMAGL 471

Query: 361  SVVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHL 540
            +VVGR++YGVFPLRGKLLNVREA+  Q+ DN EI+NIK+ILGLQ  KEY S K LRYG L
Sbjct: 472  AVVGRDHYGVFPLRGKLLNVREASAIQVRDNEEIKNIKRILGLQQDKEYTSLKSLRYGSL 531

Query: 541  MIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMP 720
            MIMTDQDHDGSHIKGLLINFIH+FWPSLLK+PSF+VEFITP++KAT+   K+ L+FYSMP
Sbjct: 532  MIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATHKNGKS-LAFYSMP 590

Query: 721  EFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELA 900
            E+EAWKESL GN++GWSIKYYKGLGTS S+EG++YF+N+ MHKK+F+W+D +DGE+IELA
Sbjct: 591  EYEAWKESLRGNASGWSIKYYKGLGTSTSKEGRDYFQNLAMHKKDFIWIDERDGEAIELA 650

Query: 901  FSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKP 1080
            FSKKKIE RKNWLRQFEP  +LDQ E LIKYSDF++KELI FS ADLQRSIPSMVDGLKP
Sbjct: 651  FSKKKIEERKNWLRQFEPSVHLDQKEKLIKYSDFVHKELIQFSMADLQRSIPSMVDGLKP 710

Query: 1081 GQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLL 1260
            GQRKILFC+FKRNFVK+AKVAQF GYVSE+SAYHHGEQSLA+TII MAQD+VGSNNINLL
Sbjct: 711  GQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQDYVGSNNINLL 770

Query: 1261 QPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPI 1440
            QP GQFGTR+ GGKDHASARYI+T L+PITRFLFPKDDD LLDYLNEDGQSIEP+WY+PI
Sbjct: 771  QPNGQFGTRNLGGKDHASARYIYTRLSPITRFLFPKDDDRLLDYLNEDGQSIEPTWYVPI 830

Query: 1441 IPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSAT 1620
            IP VLVNGSEGIGTGWSSYIPNYN +DIVANV+RLLN E M PMDPWYRGF G IEK+  
Sbjct: 831  IPTVLVNGSEGIGTGWSSYIPNYNTRDIVANVRRLLNGEAMVPMDPWYRGFSGTIEKTV- 889

Query: 1621 KEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYREH 1800
            KE G++YT+ G+IEE + TT+R++ELP+RRWTQDYKEFLES   GNDK K+PFI+ + +H
Sbjct: 890  KESGVSYTVCGVIEEGNETTVRISELPIRRWTQDYKEFLESISQGNDKAKDPFIEGFTQH 949

Query: 1801 NDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQILE 1980
            +D  TV   V + EEN+  ARQEGL KKFKLTT+IST+NMHLFD K VIKKYD+PEQILE
Sbjct: 950  SDHSTVDIIVHLPEENLMAARQEGLLKKFKLTTSISTSNMHLFDPKGVIKKYDTPEQILE 1009

Query: 1981 EFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQK 2160
            EFF LR  +YEKR                   RFIL VV  EI+V+ R+RADLFLELQQK
Sbjct: 1010 EFFHLRLEFYEKRKKVLLDNLEMELLKLENKVRFILAVVNGEIIVSNRRRADLFLELQQK 1069

Query: 2161 GFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKG-GALASDYDYLMSMRIDSLTEEKVQ 2337
            GFTPFPKKTK  +  VAGA E+  E EE+ +   G GA  SDY+YL+SM I +LT E+VQ
Sbjct: 1070 GFTPFPKKTKAQEPEVAGAIEDTEETEENSESASGNGARISDYEYLISMAIGTLTIERVQ 1129

Query: 2338 ELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMR--MNHI 2511
             LCA ++K+  EV ELR ++P++                      AE A+K+ R  + + 
Sbjct: 1130 ALCADRDKVNNEVAELRNSTPRSLWLKDLDALEMELGELEKSEALAEEAKKKSRNQVKNA 1189

Query: 2512 AGVAPSKQGAKKPRKNT--ANKLSVSATTTD---------------------AGGQXXXX 2622
                 S+   K PRKN   AN    +A + +                     A  +    
Sbjct: 1190 PAAKVSRPAPKNPRKNNKKANNAEAAAESRETSSSFVFEMEKAPEIVKRKVGAVAKKAPA 1249

Query: 2623 XXXXXXQTVEESDEDEEILALKDRLAAYNLDSSPDNGAMETDTVVSDQGKAKKQPSRNAA 2802
                    V  SD+D+E+L LKDRLAAYNLDSSP+N A + +T V  +   +K+PS+ A 
Sbjct: 1250 GKKQAKSAVVLSDDDDEVLELKDRLAAYNLDSSPENSAGK-ETEVPQEPVQRKEPSKRA- 1307

Query: 2803 AKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAKATRKRGPA 2982
                   +  D+D++ E +    P                  G    ++   A +KRG A
Sbjct: 1308 -------MQIDDDEDFEVEIAAAPA-------AGKKGGRKAAGTTKASKPPAAAKKRGAA 1353

Query: 2983 --QASKATTTS--------------------QKVRKMRASPFNKKSGSVLSK 3072
              + S+A+++S                     KVRKMRASPFNKKS SV+ K
Sbjct: 1354 ANKQSQASSSSGQKLLTDMLKPVETSGVSPEPKVRKMRASPFNKKSSSVMGK 1405


>ref|XP_002298421.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550348289|gb|EEE83226.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1485

 Score = 1236 bits (3198), Expect = 0.0
 Identities = 673/1138 (59%), Positives = 795/1138 (69%), Gaps = 74/1138 (6%)
 Frame = +1

Query: 1    AHNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLL 180
            AHNVK++LWVFVN LIDNPAFDSQTKETLT RQ S GSKCELS+DFLKKVAKS +V+ LL
Sbjct: 348  AHNVKNYLWVFVNCLIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVAKSDIVDNLL 407

Query: 181  TWADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGI 360
            +WA FK+SKELKKTDG K  ++  +PKLEDAN+AGGR S+KCTLILTEGDSAKALA++G+
Sbjct: 408  SWAKFKESKELKKTDGTKTAKVN-VPKLEDANEAGGRYSEKCTLILTEGDSAKALAVTGV 466

Query: 361  SVVG---RNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRY 531
            + +    R++YGVFPLRGKLLNVREA  KQ+ +N EI+ IK+ILGLQH K+Y + K LRY
Sbjct: 467  AGLTQTERSFYGVFPLRGKLLNVREATPKQLKENKEIECIKKILGLQHHKQYSNVKSLRY 526

Query: 532  GHLMIMTDQ-------------DHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLK 672
            GHLMIMTDQ             DHDGSHIKGLLINF+H+FWPSLLKVPSF+VEFITP++K
Sbjct: 527  GHLMIMTDQAKERFANFLCFKQDHDGSHIKGLLINFLHSFWPSLLKVPSFLVEFITPIVK 586

Query: 673  ATNNRTKTVLSFYSMPEFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKK 852
            AT+ R  TVLSFYSMPE+E+WK SL GN++GWSIKYYKGLGTS S+EGK YF+++  HKK
Sbjct: 587  ATH-RNGTVLSFYSMPEYESWKGSLAGNASGWSIKYYKGLGTSTSKEGKAYFQSLDKHKK 645

Query: 853  EFVWMDAQDGESIELAFSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSR 1032
            +F+WMD QDG++IELAFSKKKIEARKNWLRQ+EP  +LDQ++ LIKYSDFINKELILFS 
Sbjct: 646  DFIWMDEQDGDAIELAFSKKKIEARKNWLRQYEPGTHLDQNQKLIKYSDFINKELILFSM 705

Query: 1033 ADLQRSIPSMVDGLKPGQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTI 1212
            ADLQRSIPSMVDGLKPGQRKILFC+FKRNFVK+AK++QF GYVSE+SAYHHGEQSLA+TI
Sbjct: 706  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKISQFSGYVSEHSAYHHGEQSLASTI 765

Query: 1213 IAMAQDFVGSNNINLLQPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDY 1392
            I MAQDFVGSNNINLL P GQFGTR  GGKDHASARYI+T L+PITRFLFPKDDD LLDY
Sbjct: 766  IGMAQDFVGSNNINLLLPNGQFGTRSVGGKDHASARYIYTQLSPITRFLFPKDDDGLLDY 825

Query: 1393 LNEDGQSIEPSWYMPIIPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPM 1572
            L+EDGQ+IEP+WYMPIIP+VLVNG EGIGTGWS++IPNYNP+DIVAN++RLLN E M+PM
Sbjct: 826  LDEDGQTIEPNWYMPIIPMVLVNGCEGIGTGWSTFIPNYNPRDIVANIRRLLNGEMMEPM 885

Query: 1573 DPWYRGFKGRIEKSATKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMT 1752
            +PWYRGFKG IEK A+KE G +YT+ G+I E++ TTLR+TELP+RRWT DYK FL S   
Sbjct: 886  NPWYRGFKGTIEKGASKEAGCSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTE 945

Query: 1753 GN-----DKIKEPFIKDYREHNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTN 1917
            GN     +  K+PFIKD+R++ DD TV FEV ++EENM IA+QEGL KKFKLTTTIST+N
Sbjct: 946  GNRDENGNLPKDPFIKDFRKYGDDATVVFEVLLSEENMMIAKQEGLLKKFKLTTTISTSN 1005

Query: 1918 MHLFDSKSVIKKYDSPEQILEEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVV 2097
            MHLFDS  VIKKYD+PEQILEEFF LR  YYE+R                   RFILGVV
Sbjct: 1006 MHLFDSAGVIKKYDNPEQILEEFFHLRLEYYERRKKVLLENLEFELLKLENKVRFILGVV 1065

Query: 2098 RDEIVVNKRKRADLFLELQQKGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALA 2277
            R EI+VN RKRADLFLEL QKGFTP PKK+K   A VAGA+++  E E+S +    G  A
Sbjct: 1066 RGEIIVNNRKRADLFLELHQKGFTPIPKKSK---AVVAGATDDKDEAEDSLE--VSGVRA 1120

Query: 2278 SDYDYLMSMRIDSLTEEKVQELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXX 2457
            SDYDYL+SM I +LT EKVQ+LCA  +KL  EVD LR+T+P                   
Sbjct: 1121 SDYDYLLSMAIGTLTLEKVQQLCADHDKLNGEVDNLRKTTPIVLWVKDLEALEMQLDVLD 1180

Query: 2458 XXXXXAEGARKEMR--MNHIAGVAPSKQGAKKPRK------------NTANKLSVSATTT 2595
                 AE ARK+++   N  AG   SKQ  K PRK             T  K S SA  T
Sbjct: 1181 KYDAEAEEARKKLKGDANGEAGFKVSKQAPKNPRKYTKKAINEEVSVETMGKASSSAMET 1240

Query: 2596 D-----------AGGQXXXXXXXXXXQTVEESDEDEEILALKDRLAAYNLDSSPDNGA-M 2739
            +           AG +            +  SDED+EI +LKDRL AY LDSSP+  A M
Sbjct: 1241 ENAAEVVKPKGRAGSRKAPAKKQEKPSPI--SDEDDEIESLKDRLKAYRLDSSPEQSADM 1298

Query: 2740 ETDTVVSDQGKAKKQPSRNAAAKKATYVLS--SDEDDEPEQQQRLMPTIXXXXXXXXXXX 2913
            ET+ +    G       R AA KK    +S  SD +DEP+        +           
Sbjct: 1299 ETEVLRVPAG-------RKAARKKPLAAVSVISDSEDEPDLDDDFDVQVKAVPETKKKGG 1351

Query: 2914 XXXXXGRKPKNETAKATRKRGPAQ------------------ASKATTTSQKVRKMRASP 3039
                       +   AT++RGPA                        +  +KVRKMRASP
Sbjct: 1352 RKAAAANDKAAKPPAATKRRGPASKQSQGLGQQLLTEMLKPAEESGISPEKKVRKMRASP 1411

Query: 3040 FNKKSGSVLSKPRNED-------XXXXXXXXXXXXXXXRTRPKRESRTKAAVYVESDS 3192
            FNKKSGS+L      D                      + RP+R +R K   YV SDS
Sbjct: 1412 FNKKSGSLLGGIHKGDDTGIETMPASTSENADVIDVPAKARPQRANR-KQTTYVLSDS 1468


>ref|XP_004953539.1| PREDICTED: DNA topoisomerase 2-like [Setaria italica]
          Length = 1480

 Score = 1210 bits (3131), Expect = 0.0
 Identities = 654/1075 (60%), Positives = 765/1075 (71%), Gaps = 52/1075 (4%)
 Frame = +1

Query: 4    HNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLLT 183
            HNV++HLWVFVNALIDNPAFDSQTKETLTTRQGS GSKCELS +FLK V KS +V+ +L+
Sbjct: 345  HNVRNHLWVFVNALIDNPAFDSQTKETLTTRQGSFGSKCELSNEFLKGVEKSSIVSNVLS 404

Query: 184  WADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGIS 363
            WADFK SKELKKTDG+K+ RI+GIPKLEDAN+AGG++S+KCTLILTEGDSAKALAM+GI+
Sbjct: 405  WADFKLSKELKKTDGSKKSRISGIPKLEDANEAGGKDSNKCTLILTEGDSAKALAMAGIA 464

Query: 364  VVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHLM 543
            VVGR++YGVFPLRGKLLNVREANHKQI+DN EIQNIKQILGLQHGK+YDS KGLRYGHLM
Sbjct: 465  VVGRDHYGVFPLRGKLLNVREANHKQILDNTEIQNIKQILGLQHGKQYDSTKGLRYGHLM 524

Query: 544  IMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATN-NRTKTVLSFYSMP 720
            IMTDQDHDGSHIKGLLINFIH+FWPSLLKVPSF+VEFITP++KAT  N TK   SFY+MP
Sbjct: 525  IMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITPIIKATKKNETK---SFYTMP 581

Query: 721  EFEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELA 900
            E+E WK +LG +++ W+IKYYKGLGTS S+EGK+YF NI  HKK+FVW+D QDG  IELA
Sbjct: 582  EYEDWKRNLGASASSWTIKYYKGLGTSTSKEGKDYFTNIDQHKKDFVWVDDQDGNEIELA 641

Query: 901  FSKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKP 1080
            FSKK+I  RK WL  F+P  YLDQ E  IKY DFINKELILFS ADLQRSIPSMVDG KP
Sbjct: 642  FSKKRIADRKEWLTNFQPGTYLDQREKEIKYRDFINKELILFSLADLQRSIPSMVDGFKP 701

Query: 1081 GQRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLL 1260
            GQRKILFC+FKRN VK+ KVAQF GYVSE+SAYHHGEQSLA+TI+ MAQ FVGSNNINLL
Sbjct: 702  GQRKILFCSFKRNLVKETKVAQFSGYVSEHSAYHHGEQSLASTIVGMAQSFVGSNNINLL 761

Query: 1261 QPEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPI 1440
             P GQFGTR QGGKD AS RYIFT L+ ITR +FPKDDD LL+YLNEDGQ IEPSWY+PI
Sbjct: 762  YPGGQFGTRSQGGKDAASPRYIFTKLSHITRSIFPKDDDTLLNYLNEDGQLIEPSWYVPI 821

Query: 1441 IPLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEK-SA 1617
            +P+VLVNGSEGIGTGWS++IPNYNP+DI AN++RLLN+E   PM PWYRGFKG I+K + 
Sbjct: 822  LPMVLVNGSEGIGTGWSTFIPNYNPRDIAANIRRLLNDEATVPMHPWYRGFKGSIQKANN 881

Query: 1618 TKEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTG-NDKIKEPFIKDYR 1794
             +  G TYTITG+IE +DSTTLR+TELPVRRWTQDYK+F++S      +K KE FI+D  
Sbjct: 882  ARVDGATYTITGIIEAVDSTTLRITELPVRRWTQDYKDFIDSLRPDEKNKDKEAFIEDCT 941

Query: 1795 EHNDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQI 1974
               D+  V+FE+ ++E+NMNIA++EGL KKFKLTTTI TTNMHLFDS   I+KYD+PEQI
Sbjct: 942  AQGDNDDVYFELKLSEKNMNIAKEEGLLKKFKLTTTIGTTNMHLFDSDGKIRKYDTPEQI 1001

Query: 1975 LEEFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQ 2154
            LEEFF LR  +Y KR                   RFI  VV +EIVVN RKRADLFLEL+
Sbjct: 1002 LEEFFKLRLQFYFKRKEVLLQNMKLDLKKLENKARFIRCVVNNEIVVNNRKRADLFLELR 1061

Query: 2155 QKGFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKV 2334
            QK F PFPKK K  + A  GA+EE+ E EESP+    G   SDY+YL+SM I +LT EK+
Sbjct: 1062 QKNFDPFPKKKKRAEPAAVGATEEE-ENEESPE-AANGVDPSDYEYLLSMAIGTLTLEKI 1119

Query: 2335 QELCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIA 2514
            QEL A+KEK+  EV+EL +T+ ++                          RK +R +  A
Sbjct: 1120 QELNAEKEKVVNEVEELEKTTEKSLWLRDLDAFEKDLDVLDQMDLADAQERKRLR-DENA 1178

Query: 2515 GVAPSKQGAKKPRKNTANKLS--VSATTTDAGGQXXXXXXXXXXQTVEES---------- 2658
              A SK   KK RK  A K     S T  DA             +  +E+          
Sbjct: 1179 KKAGSKAAPKKQRKKPAAKQPKVESDTEGDAAEPVVAKRGAQRKKPAKENGAGSDDEDYV 1238

Query: 2659 ----------------------DEDEEIL-ALKDRLAAYNL-DSSPDNGAMETDTVVSD- 2763
                                  DEDE+ L  LK+RLAA+NL DSSPDN AMET+T     
Sbjct: 1239 AEKAKAEQQKKKQSKKASAPPVDEDEDDLPTLKERLAAFNLNDSSPDNSAMETETTEEQI 1298

Query: 2764 QGKAKKQPSRNAAAKKATYVLSSDEDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPK 2943
             GK KK  S+    KKA+  L+   DDE E     +                     KPK
Sbjct: 1299 GGKGKKGVSKRGGGKKASSSLAVIHDDEDEDVDVSLEVPEEVQGPKKGRGRKPAAPVKPK 1358

Query: 2944 NETAKATRKRGPAQA------------SKATTTSQKVRKMRASPFNKKSGSVLSK 3072
               A ATRKR PAQ             + A +  +KVRKMR SPFNKKSGS+L +
Sbjct: 1359 ---ATATRKRAPAQGKAMMLKPTEDSNTSAPSPEKKVRKMRESPFNKKSGSILQR 1410


>ref|XP_002452699.1| hypothetical protein SORBIDRAFT_04g030880 [Sorghum bicolor]
            gi|241932530|gb|EES05675.1| hypothetical protein
            SORBIDRAFT_04g030880 [Sorghum bicolor]
          Length = 1452

 Score = 1207 bits (3124), Expect = 0.0
 Identities = 643/1054 (61%), Positives = 763/1054 (72%), Gaps = 31/1054 (2%)
 Frame = +1

Query: 4    HNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSLGSKCELSQDFLKKVAKSGVVNTLLT 183
            HNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGS GSK ELS DFLKKV KS ++  +L+
Sbjct: 345  HNVKSHLWVFVNALIDNPAFDSQTKETLTTRQGSFGSKFELSIDFLKKVEKSSIIENVLS 404

Query: 184  WADFKQSKELKKTDGAKRQRITGIPKLEDANDAGGRNSDKCTLILTEGDSAKALAMSGIS 363
            WADFK SKELKKTDG+K+ RI+GIPKLEDAN+AGG++S+KCTLILTEGDSAKALAMSGI+
Sbjct: 405  WADFKLSKELKKTDGSKKSRISGIPKLEDANEAGGKDSEKCTLILTEGDSAKALAMSGIA 464

Query: 364  VVGRNYYGVFPLRGKLLNVREANHKQIMDNAEIQNIKQILGLQHGKEYDSAKGLRYGHLM 543
            VVGR+YYGVFPLRGKLLNVREANHKQIM+NAEIQNIKQILGLQHGK+Y SAKGLRYGHLM
Sbjct: 465  VVGRDYYGVFPLRGKLLNVREANHKQIMENAEIQNIKQILGLQHGKQYASAKGLRYGHLM 524

Query: 544  IMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFMVEFITPLLKATNNRTKTVLSFYSMPE 723
            IMTDQDHDGSHIKGLLINFIH+FWPSLLKV SF+VEF+TP++KAT  R KT +SFY+MPE
Sbjct: 525  IMTDQDHDGSHIKGLLINFIHSFWPSLLKVESFLVEFVTPIIKAT--RGKTTISFYTMPE 582

Query: 724  FEAWKESLGGNSNGWSIKYYKGLGTSKSEEGKEYFRNIGMHKKEFVWMDAQDGESIELAF 903
            +E W+ +LG +++ W+IKYYKGLGTS ++EG+EYF++I  HKK+FVW D QDG  IELAF
Sbjct: 583  YEEWRTNLGASASSWTIKYYKGLGTSTAKEGREYFKDITDHKKDFVWEDDQDGNHIELAF 642

Query: 904  SKKKIEARKNWLRQFEPENYLDQSETLIKYSDFINKELILFSRADLQRSIPSMVDGLKPG 1083
            SKK+I  RK WL  F+P  Y+DQ E  ++YSDFINKELILFS ADLQRSIPSMVDGLKPG
Sbjct: 643  SKKRIADRKLWLTNFQPGTYIDQQEKRVRYSDFINKELILFSMADLQRSIPSMVDGLKPG 702

Query: 1084 QRKILFCAFKRNFVKQAKVAQFIGYVSENSAYHHGEQSLATTIIAMAQDFVGSNNINLLQ 1263
            QRKILFC+FKRNFVK+AKVAQF GYVSE+SAYHHGEQSLA+TII MAQ+FVGSNNINL+ 
Sbjct: 703  QRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGSNNINLMF 762

Query: 1264 PEGQFGTRHQGGKDHASARYIFTCLAPITRFLFPKDDDILLDYLNEDGQSIEPSWYMPII 1443
            P GQFGTR QGGKD AS RYIFT L+ ITR +FPKDDDILL+YLNEDGQSIEP+WYMPI+
Sbjct: 763  PGGQFGTRAQGGKDAASPRYIFTKLSHITRSIFPKDDDILLNYLNEDGQSIEPTWYMPIL 822

Query: 1444 PLVLVNGSEGIGTGWSSYIPNYNPKDIVANVKRLLNNEPMQPMDPWYRGFKGRIEKSA-T 1620
            P+VLVNGSEGIGTGWS++IPNYNP+DIVAN++RLLN E   PM PWYRGFKG IEK+  T
Sbjct: 823  PMVLVNGSEGIGTGWSTFIPNYNPRDIVANLRRLLNEESTVPMHPWYRGFKGSIEKTVNT 882

Query: 1621 KEGGLTYTITGLIEEIDSTTLRVTELPVRRWTQDYKEFLESSMTGNDKIKEPFIKDYREH 1800
            K  G TYT+TG+IE +D++ LR+TELP+RRWT DYKEFLES     +K K PFI+D    
Sbjct: 883  KVVGSTYTVTGIIEVVDNSRLRITELPIRRWTGDYKEFLESLGPDKNKDKVPFIEDVTAQ 942

Query: 1801 NDDKTVHFEVSVTEENMNIARQEGLEKKFKLTTTISTTNMHLFDSKSVIKKYDSPEQILE 1980
             D++ ++ E+ ++E NMNIA++EGL KKFKLTTTI T+NMHLFDS   I+KYD+PEQILE
Sbjct: 943  GDNEDIYIEIQLSEGNMNIAKEEGLVKKFKLTTTIGTSNMHLFDSNGKIRKYDTPEQILE 1002

Query: 1981 EFFALRFVYYEKRXXXXXXXXXXXXXXXXXXXRFILGVVRDEIVVNKRKRADLFLELQQK 2160
            EFF LR  +Y KR                   RFI  VV +EI+VN RKRADLFLEL+QK
Sbjct: 1003 EFFQLRLEFYVKRKEALLKNIKLELKKLENKVRFIRCVVDNEIIVNNRKRADLFLELRQK 1062

Query: 2161 GFTPFPKKTKGIDAAVAGASEEDGEQEESPQPGKGGALASDYDYLMSMRIDSLTEEKVQE 2340
             F PFPKK K  + A AGA EE+ E+     P    A  SDY+YL++M I +LT EK+QE
Sbjct: 1063 NFDPFPKKKKRAEPAAAGALEEENEE----NPEAEAAEPSDYEYLLAMPIGTLTLEKIQE 1118

Query: 2341 LCAQKEKLEAEVDELRRTSPQTXXXXXXXXXXXXXXXXXXXXXXAEGARKEMRMNHIAG- 2517
            L A+K+KL  +V+EL+ TSP++                       E  R++   +   G 
Sbjct: 1119 LIAEKQKLVDDVEELKNTSPKSLWLKDLDAFEKELDLLDQMDLSEEEQREKRIKDGKKGR 1178

Query: 2518 --VAPSKQ--GAKKPRKNTANKLSVSATTTDAGGQXXXXXXXXXXQTVEESDEDEE---I 2676
               AP KQ  G K   K    K        DA             +  +++  DEE   I
Sbjct: 1179 SKAAPKKQQRGKKAGSKAAVKKEKSDTEDDDAAEPVVPKRGGQQKKAPKKAPVDEEEFDI 1238

Query: 2677 LALKDRLAAYNL-DSSPDNGAMETD-TVVSDQGKAKKQPSRNAAAKKA-----TYVLSSD 2835
             ALKDRLA +N+ DSSPD  AMET+ T   ++  A K PS+    KKA       + S D
Sbjct: 1239 PALKDRLADFNINDSSPDYSAMETEITEEQNEKLATKGPSKRGGGKKAVSSSLVMIQSDD 1298

Query: 2836 EDDEPEQQQRLMPTIXXXXXXXXXXXXXXXXGRKPKNETAKATRKRGPAQASKA------ 2997
            EDD+   ++     +                  KPK   A A RKR PAQ          
Sbjct: 1299 EDDDFTLEE-----VSEVQAQKKGRGKKPAAAVKPK---APAPRKRAPAQGKATQKKIDE 1350

Query: 2998 ---------TTTSQKVRKMRASPFNKKSGSVLSK 3072
                     T+  +KVRKMR SPFNKKSGS+L +
Sbjct: 1351 MLQGIEDNNTSPEKKVRKMRPSPFNKKSGSILQR 1384